View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0752-Insertion-14 (Length: 337)

Name: NF0752-Insertion-14
Description: NF0752
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0752-Insertion-14
NF0752-Insertion-14
[»] chr7 (81 HSPs)
chr7 (8-150)||(2852804-2852946)
chr7 (205-337)||(2853001-2853134)
chr7 (29-150)||(4681236-4681356)
chr7 (33-150)||(2354042-2354159)
chr7 (29-150)||(22773516-22773637)
chr7 (29-150)||(9396334-9396455)
chr7 (31-150)||(12140468-12140587)
chr7 (31-150)||(30991648-30991767)
chr7 (29-150)||(11650157-11650278)
chr7 (31-150)||(9140988-9141108)
chr7 (29-145)||(40409170-40409285)
chr7 (31-150)||(4680512-4680631)
chr7 (30-128)||(32277648-32277746)
chr7 (31-150)||(16673877-16673997)
chr7 (31-150)||(17648245-17648365)
chr7 (205-337)||(12140642-12140776)
chr7 (32-150)||(45418298-45418416)
chr7 (33-150)||(16362175-16362292)
chr7 (30-125)||(22325016-22325111)
chr7 (219-332)||(4680700-4680814)
chr7 (207-337)||(22773693-22773823)
chr7 (29-125)||(1565947-1566043)
chr7 (275-337)||(9395913-9395975)
chr7 (31-128)||(34838251-34838348)
chr7 (31-128)||(40449363-40449460)
chr7 (32-108)||(27711937-27712013)
chr7 (205-337)||(4681411-4681549)
chr7 (275-337)||(21128226-21128288)
chr7 (275-332)||(11649750-11649807)
chr7 (275-336)||(22324466-22324527)
chr7 (30-125)||(21128795-21128890)
chr7 (275-337)||(2354523-2354585)
chr7 (275-337)||(16492397-16492459)
chr7 (275-337)||(16671788-16671850)
chr7 (275-337)||(17646156-17646218)
chr7 (275-333)||(19222299-19222357)
chr7 (275-333)||(27712411-27712469)
chr7 (33-150)||(35125481-35125599)
chr7 (275-332)||(11649811-11649868)
chr7 (36-125)||(18487919-18488008)
chr7 (276-336)||(1566361-1566421)
chr7 (275-335)||(34837702-34837762)
chr7 (205-337)||(40409294-40409427)
chr7 (276-337)||(45419495-45419556)
chr7 (31-150)||(6250421-6250540)
chr7 (275-337)||(9141820-9141882)
chr7 (275-337)||(11649872-11649934)
chr7 (61-150)||(22967792-22967882)
chr7 (40-150)||(48639025-48639134)
chr7 (60-125)||(40686184-40686249)
chr7 (38-125)||(11642147-11642235)
chr7 (205-266)||(9396217-9396279)
chr7 (291-337)||(16362565-16362611)
chr7 (31-125)||(16491612-16491706)
chr7 (275-337)||(16671431-16671492)
chr7 (275-337)||(17645799-17645860)
chr7 (275-332)||(9395979-9396036)
chr7 (275-328)||(18487343-18487396)
chr7 (227-266)||(48640512-48640551)
chr7 (35-125)||(21225056-21225146)
chr7 (275-325)||(40449963-40450013)
chr7 (31-108)||(5553562-5553639)
chr7 (60-125)||(16375464-16375529)
chr7 (275-330)||(2354462-2354517)
chr7 (227-266)||(19222695-19222734)
chr7 (227-266)||(21128626-21128665)
chr7 (227-266)||(22324845-22324884)
chr7 (227-266)||(27712162-27712201)
chr7 (217-266)||(2354226-2354276)
chr7 (228-266)||(16672103-16672141)
chr7 (228-266)||(17646471-17646509)
chr7 (30-108)||(24787353-24787431)
chr7 (207-263)||(16362349-16362406)
chr7 (229-266)||(32277870-32277907)
chr7 (225-266)||(40449584-40449625)
chr7 (275-318)||(6250027-6250071)
chr7 (227-266)||(16491833-16491872)
chr7 (227-266)||(28170444-28170483)
chr7 (307-337)||(23591521-23591551)
chr7 (307-337)||(34837623-34837653)
chr7 (227-263)||(1566175-1566211)
[»] chr4 (76 HSPs)
chr4 (205-337)||(47769138-47769271)
chr4 (31-150)||(48076733-48076852)
chr4 (33-150)||(12795493-12795610)
chr4 (205-337)||(23952292-23952425)
chr4 (33-150)||(32010482-32010599)
chr4 (29-150)||(36639720-36639845)
chr4 (28-150)||(47769326-47769448)
chr4 (31-150)||(37325267-37325386)
chr4 (28-150)||(8478509-8478631)
chr4 (205-337)||(36639531-36639665)
chr4 (31-125)||(54652880-54652974)
chr4 (30-150)||(2479029-2479150)
chr4 (32-141)||(23952123-23952231)
chr4 (31-150)||(47427774-47427894)
chr4 (205-332)||(21581004-21581131)
chr4 (31-125)||(52688587-52688681)
chr4 (33-150)||(29968535-29968652)
chr4 (31-150)||(14989313-14989432)
chr4 (45-150)||(24050908-24051013)
chr4 (30-125)||(28379292-28379387)
chr4 (30-125)||(28813899-28813994)
chr4 (30-128)||(8119275-8119373)
chr4 (36-108)||(44500945-44501017)
chr4 (38-125)||(2177814-2177901)
chr4 (275-337)||(8397604-8397666)
chr4 (275-337)||(12795977-12796039)
chr4 (30-108)||(18000250-18000328)
chr4 (275-337)||(29967319-29967381)
chr4 (33-108)||(4942394-4942468)
chr4 (209-319)||(32962746-32962857)
chr4 (275-337)||(8479004-8479066)
chr4 (275-337)||(21581135-21581197)
chr4 (275-337)||(24049468-24049530)
chr4 (275-337)||(24049749-24049811)
chr4 (275-337)||(52689277-52689339)
chr4 (275-332)||(47631781-47631838)
chr4 (61-124)||(22293666-22293729)
chr4 (61-147)||(41850895-41850982)
chr4 (31-108)||(8396882-8396960)
chr4 (275-337)||(12899739-12899801)
chr4 (275-337)||(52689478-52689540)
chr4 (275-332)||(8397484-8397541)
chr4 (275-332)||(8478944-8479001)
chr4 (49-125)||(53143031-53143107)
chr4 (47-150)||(21580846-21580949)
chr4 (275-337)||(22293079-22293141)
chr4 (275-337)||(54653510-54653572)
chr4 (28-125)||(7822290-7822392)
chr4 (279-332)||(53144712-53144765)
chr4 (276-332)||(12795917-12795973)
chr4 (280-336)||(41852009-41852065)
chr4 (65-125)||(52688741-52688801)
chr4 (31-105)||(15464994-15465068)
chr4 (85-133)||(32962629-32962677)
chr4 (227-266)||(12899982-12900021)
chr4 (275-317)||(7821706-7821748)
chr4 (217-266)||(8478698-8478748)
chr4 (275-333)||(47631718-47631776)
chr4 (277-317)||(7809712-7809752)
chr4 (227-266)||(4942209-4942248)
chr4 (227-266)||(8397123-8397162)
chr4 (89-145)||(10466991-10467049)
chr4 (205-263)||(12795665-12795724)
chr4 (227-266)||(28813731-28813770)
chr4 (28-72)||(7812861-7812905)
chr4 (227-266)||(2177644-2177683)
chr4 (227-266)||(8119116-8119155)
chr4 (227-266)||(18001776-18001815)
chr4 (227-266)||(22293495-22293534)
chr4 (227-266)||(24050200-24050239)
chr4 (227-266)||(28379523-28379562)
chr4 (275-333)||(4941864-4941917)
chr4 (307-337)||(22292866-22292896)
chr4 (307-337)||(28379869-28379899)
chr4 (307-336)||(8118567-8118596)
chr4 (234-266)||(7812644-7812676)
[»] chr5 (54 HSPs)
chr5 (30-150)||(16529324-16529444)
chr5 (28-150)||(43394561-43394683)
chr5 (30-150)||(7672741-7672861)
chr5 (33-148)||(10409897-10410012)
chr5 (30-150)||(41092265-41092385)
chr5 (33-150)||(14164205-14164324)
chr5 (30-150)||(16538163-16538283)
chr5 (31-125)||(41511677-41511771)
chr5 (205-333)||(43394738-43394868)
chr5 (205-337)||(7672916-7673048)
chr5 (27-150)||(19123472-19123593)
chr5 (33-128)||(19322760-19322855)
chr5 (28-150)||(23141338-23141463)
chr5 (207-332)||(26522888-26523014)
chr5 (205-335)||(35159890-35160018)
chr5 (45-150)||(38004046-38004150)
chr5 (205-337)||(10409709-10409840)
chr5 (30-150)||(7129171-7129293)
chr5 (38-125)||(20563299-20563386)
chr5 (31-150)||(26522707-26522826)
chr5 (275-337)||(16305532-16305594)
chr5 (276-337)||(38110046-38110107)
chr5 (33-125)||(38110580-38110672)
chr5 (51-125)||(9487349-9487423)
chr5 (275-337)||(13035059-13035121)
chr5 (275-337)||(13105033-13105095)
chr5 (275-337)||(41511086-41511148)
chr5 (279-332)||(13104976-13105029)
chr5 (275-334)||(14166043-14166102)
chr5 (275-337)||(23138182-23138244)
chr5 (31-124)||(12441616-12441709)
chr5 (279-332)||(13035002-13035055)
chr5 (276-336)||(26523019-26523079)
chr5 (30-125)||(16306099-16306194)
chr5 (276-337)||(7127756-7127817)
chr5 (275-332)||(41092695-41092752)
chr5 (275-337)||(19122424-19122486)
chr5 (275-333)||(41092756-41092814)
chr5 (207-266)||(13034811-13034871)
chr5 (100-149)||(35160074-35160123)
chr5 (275-337)||(38004524-38004588)
chr5 (207-266)||(13104784-13104844)
chr5 (229-266)||(9487555-9487592)
chr5 (208-263)||(41092443-41092499)
chr5 (227-266)||(38110410-38110449)
chr5 (275-309)||(24326319-24326353)
chr5 (275-309)||(24347416-24347450)
chr5 (275-335)||(9487925-9487979)
chr5 (33-78)||(24270607-24270652)
chr5 (33-78)||(24347233-24347278)
chr5 (301-337)||(19122088-19122124)
chr5 (277-309)||(24270797-24270829)
chr5 (221-264)||(38004227-38004271)
chr5 (230-266)||(41511508-41511544)
[»] chr6 (35 HSPs)
chr6 (31-150)||(9829291-9829410)
chr6 (31-150)||(25068563-25068682)
chr6 (205-337)||(25068375-25068508)
chr6 (31-150)||(29202765-29202884)
chr6 (205-337)||(9829105-9829238)
chr6 (33-150)||(17905478-17905595)
chr6 (205-337)||(4810854-4810987)
chr6 (30-149)||(1394331-1394451)
chr6 (33-125)||(34294597-34294689)
chr6 (30-125)||(17203568-17203663)
chr6 (31-149)||(4810679-4810798)
chr6 (31-125)||(4099553-4099647)
chr6 (275-337)||(29201727-29201789)
chr6 (276-337)||(26832377-26832438)
chr6 (275-328)||(4100175-4100228)
chr6 (278-337)||(17906665-17906724)
chr6 (276-337)||(1393732-1393793)
chr6 (275-322)||(23622425-23622472)
chr6 (275-333)||(809017-809075)
chr6 (29-79)||(6036584-6036634)
chr6 (29-108)||(23622964-23623043)
chr6 (227-266)||(29202001-29202040)
chr6 (61-125)||(26831809-26831873)
chr6 (227-266)||(17203398-17203437)
chr6 (301-337)||(17203033-17203069)
chr6 (36-108)||(32207911-32207983)
chr6 (306-337)||(808655-808686)
chr6 (227-266)||(4099781-4099820)
chr6 (227-266)||(17906290-17906329)
chr6 (30-81)||(23902752-23902803)
chr6 (227-262)||(34294432-34294467)
chr6 (307-336)||(17201779-17201808)
chr6 (307-336)||(17202813-17202842)
chr6 (302-335)||(23622387-23622420)
chr6 (229-266)||(32208125-32208162)
[»] chr2 (56 HSPs)
chr2 (205-337)||(12896214-12896347)
chr2 (28-149)||(12898607-12898728)
chr2 (205-335)||(6348258-6348389)
chr2 (28-150)||(12896037-12896159)
chr2 (30-148)||(44543359-44543477)
chr2 (31-150)||(6348444-6348563)
chr2 (31-148)||(29550703-29550820)
chr2 (205-337)||(627766-627899)
chr2 (30-125)||(833279-833374)
chr2 (28-125)||(2131969-2132066)
chr2 (33-125)||(11658235-11658327)
chr2 (31-125)||(37130759-37130853)
chr2 (31-150)||(44257020-44257139)
chr2 (31-125)||(11736844-11736938)
chr2 (30-128)||(20709588-20709686)
chr2 (30-125)||(14335826-14335921)
chr2 (31-125)||(10128782-10128876)
chr2 (31-125)||(41327152-41327246)
chr2 (33-125)||(8430566-8430657)
chr2 (30-108)||(20639778-20639856)
chr2 (31-125)||(28611522-28611616)
chr2 (275-337)||(41995613-41995675)
chr2 (28-125)||(17370664-17370761)
chr2 (275-337)||(12898201-12898263)
chr2 (275-337)||(28611669-28611731)
chr2 (28-148)||(27351504-27351625)
chr2 (275-336)||(37131347-37131408)
chr2 (275-337)||(44256658-44256720)
chr2 (46-150)||(627954-628056)
chr2 (275-332)||(12898267-12898324)
chr2 (31-128)||(19640511-19640608)
chr2 (31-128)||(19839104-19839201)
chr2 (276-337)||(41326550-41326611)
chr2 (275-332)||(44256724-44256781)
chr2 (275-337)||(29550323-29550385)
chr2 (205-266)||(29550584-29550646)
chr2 (60-150)||(11131708-11131800)
chr2 (28-125)||(30556834-30556931)
chr2 (276-337)||(10129365-10129422)
chr2 (227-266)||(14336050-14336089)
chr2 (279-337)||(11657632-11657689)
chr2 (217-266)||(12898489-12898539)
chr2 (227-266)||(11658061-11658100)
chr2 (227-266)||(11736611-11736650)
chr2 (276-337)||(14336585-14336642)
chr2 (228-263)||(10129011-10129046)
chr2 (227-266)||(17370494-17370533)
chr2 (227-266)||(20641304-20641343)
chr2 (227-262)||(20709422-20709457)
chr2 (307-337)||(28611916-28611946)
chr2 (307-337)||(28612341-28612371)
chr2 (307-337)||(28612553-28612583)
chr2 (307-337)||(28612763-28612793)
chr2 (227-265)||(41995247-41995285)
chr2 (33-125)||(41995020-41995113)
chr2 (309-337)||(11736097-11736125)
[»] chr1 (72 HSPs)
chr1 (33-150)||(27296693-27296810)
chr1 (30-150)||(28949504-28949624)
chr1 (30-147)||(48411580-48411697)
chr1 (209-337)||(24595397-24595525)
chr1 (33-149)||(1155675-1155791)
chr1 (205-337)||(1155847-1155982)
chr1 (30-121)||(12116073-12116164)
chr1 (31-125)||(16165188-16165282)
chr1 (30-125)||(21618804-21618899)
chr1 (52-150)||(44099244-44099341)
chr1 (32-149)||(318981-319096)
chr1 (31-144)||(24595594-24595707)
chr1 (45-150)||(51114278-51114383)
chr1 (33-128)||(18913109-18913204)
chr1 (205-337)||(28949679-28949813)
chr1 (205-333)||(48411755-48411885)
chr1 (30-150)||(5429625-5429746)
chr1 (33-125)||(44264518-44264610)
chr1 (30-125)||(1648260-1648355)
chr1 (30-125)||(4099889-4099984)
chr1 (31-106)||(52407478-52407553)
chr1 (31-150)||(42491591-42491711)
chr1 (31-128)||(44451664-44451761)
chr1 (28-125)||(47791410-47791507)
chr1 (277-337)||(38684203-38684263)
chr1 (33-125)||(39282396-39282488)
chr1 (277-337)||(42492020-42492080)
chr1 (205-332)||(44099396-44099527)
chr1 (30-125)||(25931331-25931426)
chr1 (275-337)||(318739-318801)
chr1 (53-150)||(38685717-38685815)
chr1 (275-337)||(51272348-51272410)
chr1 (33-125)||(3226481-3226573)
chr1 (277-337)||(45417462-45417522)
chr1 (275-337)||(3227082-3227144)
chr1 (275-337)||(21617940-21618002)
chr1 (275-337)||(44099531-44099593)
chr1 (275-333)||(47790832-47790890)
chr1 (276-337)||(1647728-1647789)
chr1 (276-337)||(30084145-30084206)
chr1 (275-337)||(5428713-5428775)
chr1 (31-125)||(6537105-6537199)
chr1 (275-337)||(21618142-21618204)
chr1 (275-337)||(44262849-44262911)
chr1 (275-337)||(44263493-44263555)
chr1 (278-333)||(16165551-16165606)
chr1 (33-108)||(52741035-52741110)
chr1 (275-333)||(18912541-18912599)
chr1 (61-150)||(21882746-21882836)
chr1 (205-337)||(27296519-27296638)
chr1 (205-264)||(318865-318925)
chr1 (65-125)||(21618684-21618744)
chr1 (275-337)||(4100451-4100512)
chr1 (279-333)||(25931810-25931864)
chr1 (30-105)||(46533409-46533484)
chr1 (279-337)||(12115491-12115549)
chr1 (75-125)||(23480701-23480751)
chr1 (33-125)||(45416854-45416946)
chr1 (227-266)||(1648091-1648130)
chr1 (227-266)||(6537329-6537368)
chr1 (227-266)||(12115896-12115935)
chr1 (227-266)||(44264346-44264385)
chr1 (37-96)||(51271753-51271812)
chr1 (227-266)||(52407698-52407737)
chr1 (227-264)||(38684625-38684662)
chr1 (227-263)||(3226705-3226741)
chr1 (227-263)||(6537393-6537429)
chr1 (227-263)||(51271960-51271996)
chr1 (227-262)||(4100115-4100150)
chr1 (205-259)||(42491768-42491823)
chr1 (228-265)||(25931557-25931594)
chr1 (308-337)||(44263057-44263086)
[»] chr3 (48 HSPs)
chr3 (31-146)||(36642738-36642853)
chr3 (46-150)||(53046926-53047030)
chr3 (30-150)||(37760852-37760972)
chr3 (31-146)||(47501155-47501271)
chr3 (30-150)||(24365922-24366042)
chr3 (205-337)||(43017454-43017586)
chr3 (31-150)||(836816-836934)
chr3 (31-150)||(23777218-23777337)
chr3 (208-337)||(46452363-46452493)
chr3 (31-125)||(38886834-38886928)
chr3 (31-147)||(11454754-11454871)
chr3 (207-337)||(836991-837124)
chr3 (30-128)||(860675-860773)
chr3 (205-337)||(36642912-36643048)
chr3 (275-337)||(20877076-20877138)
chr3 (33-125)||(20876491-20876583)
chr3 (60-150)||(46452551-46452641)
chr3 (275-337)||(51654204-51654266)
chr3 (31-125)||(51654730-51654824)
chr3 (31-128)||(45514224-45514321)
chr3 (277-337)||(53047451-53047511)
chr3 (30-125)||(10267370-10267465)
chr3 (33-150)||(2702434-2702548)
chr3 (31-108)||(11523324-11523401)
chr3 (275-337)||(18095141-18095203)
chr3 (205-266)||(35560509-35560570)
chr3 (75-150)||(43017641-43017715)
chr3 (275-337)||(35560289-35560351)
chr3 (79-139)||(35560636-35560696)
chr3 (33-96)||(2730927-2730990)
chr3 (291-337)||(11522718-11522764)
chr3 (219-318)||(37760691-37760784)
chr3 (77-150)||(11454126-11454201)
chr3 (75-150)||(17757972-17758050)
chr3 (75-150)||(19059292-19059370)
chr3 (275-337)||(860247-860313)
chr3 (275-337)||(40051039-40051101)
chr3 (60-125)||(25916720-25916785)
chr3 (230-266)||(2730738-2730774)
chr3 (227-263)||(11523140-11523176)
chr3 (227-263)||(51654563-51654599)
chr3 (227-266)||(860511-860550)
chr3 (227-266)||(10267194-10267233)
chr3 (227-266)||(20876717-20876756)
chr3 (307-337)||(38887473-38887503)
chr3 (113-150)||(35960257-35960294)
chr3 (275-303)||(47502921-47502949)
chr3 (275-318)||(49677242-49677286)
[»] chr8 (47 HSPs)
chr8 (205-337)||(3458923-3459056)
chr8 (37-150)||(42046033-42046146)
chr8 (30-150)||(37197291-37197411)
chr8 (30-150)||(30436839-30436960)
chr8 (32-150)||(39921841-39921959)
chr8 (205-337)||(37197466-37197598)
chr8 (30-150)||(32063187-32063306)
chr8 (45-150)||(603876-603982)
chr8 (75-150)||(3458793-3458868)
chr8 (30-150)||(3990770-3990896)
chr8 (30-125)||(14683404-14683499)
chr8 (37-144)||(44434583-44434690)
chr8 (30-125)||(38111705-38111800)
chr8 (33-150)||(1199818-1199935)
chr8 (33-128)||(30206515-30206610)
chr8 (205-337)||(42045846-42045977)
chr8 (275-337)||(1198062-1198124)
chr8 (31-125)||(9389495-9389589)
chr8 (275-333)||(30438902-30438960)
chr8 (275-332)||(3990399-3990456)
chr8 (276-337)||(27853535-27853596)
chr8 (276-337)||(30205964-30206025)
chr8 (29-125)||(23959898-23959994)
chr8 (31-107)||(27852982-27853058)
chr8 (38-122)||(35618017-35618101)
chr8 (30-125)||(23086374-23086469)
chr8 (275-337)||(34947657-34947719)
chr8 (275-335)||(3990335-3990395)
chr8 (29-125)||(34948237-34948333)
chr8 (278-337)||(13797610-13797669)
chr8 (205-337)||(32063002-32063132)
chr8 (276-334)||(23960439-23960497)
chr8 (275-336)||(27854279-27854340)
chr8 (64-150)||(44015105-44015192)
chr8 (30-125)||(34588430-34588519)
chr8 (275-334)||(9388948-9389007)
chr8 (227-266)||(30206342-30206381)
chr8 (227-266)||(38111534-38111573)
chr8 (205-266)||(3990653-3990715)
chr8 (227-266)||(9389326-9389365)
chr8 (275-318)||(40399374-40399417)
chr8 (79-123)||(13461328-13461372)
chr8 (227-262)||(27853201-27853236)
chr8 (298-333)||(35617871-35617906)
chr8 (60-125)||(14841021-14841086)
chr8 (308-337)||(23960696-23960725)
chr8 (278-318)||(44014634-44014675)
[»] scaffold0504 (1 HSPs)
scaffold0504 (30-150)||(1331-1452)
[»] scaffold0240 (2 HSPs)
scaffold0240 (205-337)||(13441-13574)
scaffold0240 (33-150)||(13629-13747)
[»] scaffold0018 (3 HSPs)
scaffold0018 (30-150)||(163383-163504)
scaffold0018 (275-332)||(163595-163652)
scaffold0018 (275-337)||(163656-163722)
[»] scaffold0097 (2 HSPs)
scaffold0097 (30-128)||(13427-13525)
scaffold0097 (227-262)||(13260-13295)
[»] scaffold0013 (2 HSPs)
scaffold0013 (30-150)||(104948-105069)
scaffold0013 (30-147)||(127600-127719)
[»] scaffold0320 (1 HSPs)
scaffold0320 (217-337)||(14377-14498)
[»] scaffold0059 (1 HSPs)
scaffold0059 (30-143)||(70579-70693)
[»] scaffold0294 (2 HSPs)
scaffold0294 (36-125)||(12134-12223)
scaffold0294 (227-262)||(12346-12381)
[»] scaffold0090 (1 HSPs)
scaffold0090 (30-150)||(11969-12090)
[»] scaffold0167 (1 HSPs)
scaffold0167 (60-109)||(16593-16642)


Alignment Details
Target: chr7 (Bit Score: 115; Significance: 2e-58; HSPs: 81)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 8 - 150
Target Start/End: Original strand, 2852804 - 2852946
Alignment:
Q  8 taaagaagaaagtaaattgctaaactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataa 107  Q
    |||||||||||||||||||| ||||||||||||||| | |||||||| || ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2852804 taaagaagaaagtaaattgcaaaactagatttttgacctgtgctccgttcaagtttattgtaaagggattgacatacgaataataaaatgcaatatataa 2852903  T
Q  108 taggcaacggtgaaaaaataacacgtggtaatccatagtagac 150  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  2852904 taggcaacggtgaaaaaataacacgtgataatccatagtagac 2852946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 205 - 337
Target Start/End: Original strand, 2853001 - 2853134
Alignment:
Q  205 tcggtaatcctttcaataattcgg-tatatataaccaagtttacatgaaaattagggtagccgnnnnnnnngtataaaatagaaggcatcaaacgtgatc 303  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||        |||||||||||||||||||||||||||||    
T  2853001 tcggtaatcctatcaataattcgggtatatataaccaagtttacatggaaattagggtagccgaaaaaaaagtataaaatagaaggcatcaaacgtgatc 2853100  T
Q  304 attgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||||||||||||||||||||||||||    
T  2853101 attgatatgctcatagtttctagaacaaacgtgc 2853134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 29 - 150
Target Start/End: Original strand, 4681236 - 4681356
Alignment:
Q  29 aaactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataa 128  Q
    ||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  4681236 aaactagattttttatccgtgctccgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataataggtaacggtg-aaaaataa 4681334  T
Q  129 cacgtggtaatccatagtagac 150  Q
    |||||| |||||||||||||||    
T  4681335 cacgtgataatccatagtagac 4681356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 33 - 150
Target Start/End: Original strand, 2354042 - 2354159
Alignment:
Q  33 tagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataacacg 132  Q
    ||||||||||| |||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |    
T  2354042 tagatttttgacccgtgctccgcttgggtttattgtaaagggattgacatacgaataataaaatgcaatatataataggtaacggtgaaaaaataacatg 2354141  T
Q  133 tggtaatccatagtagac 150  Q
    || |||||||||||||||    
T  2354142 tgataatccatagtagac 2354159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 29 - 150
Target Start/End: Original strand, 22773516 - 22773637
Alignment:
Q  29 aaactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataa 128  Q
    |||||||||||||||  |||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  22773516 aaactagatttttgacacgtgctccgctcgaatttattgtaaaaggattgacatacgaataataaaatgcaatatataataggtaacggtgaaaaaataa 22773615  T
Q  129 cacgtggtaatccatagtagac 150  Q
    |||||| |||| ||||||||||    
T  22773616 cacgtgataattcatagtagac 22773637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 29 - 150
Target Start/End: Complemental strand, 9396455 - 9396334
Alignment:
Q  29 aaactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataa 128  Q
    ||||||||||||||| |||||||||||||| ||||| |||||| | |||||||||||||||||||||| |||||||||||||  ||||||||||||||||    
T  9396455 aaactagatttttgacccgtgctccgctcgggtttaatgtaaaaggattgacatacgaataataaaatacaatatataatagttaacggtgaaaaaataa 9396356  T
Q  129 cacgtggtaatccatagtagac 150  Q
    || |||||||||||||||||||    
T  9396355 catgtggtaatccatagtagac 9396334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 12140468 - 12140587
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataaca 130  Q
    |||||||||||||||||||||||| ||| ||| |||||||||| |||||||||  |||||||||||||||||||||||||| ||||||||||||||||||    
T  12140468 actagatttttgatccgtgctccggtcgggttcattgtaaagggattgacatataaataataaaatgcaatatataataggtaacggtgaaaaaataaca 12140567  T
Q  131 cgtggtaatccatagtagac 150  Q
    |||| ||||| |||||||||    
T  12140568 cgtgataatctatagtagac 12140587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 30991767 - 30991648
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataaca 130  Q
    ||||||||||||| ||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||    
T  30991767 actagatttttgacccgtgctccgctcggatttattgtaaagggattgacatacgaataataaaatgcaatatatgataggtaacggtaaaaaaataaca 30991668  T
Q  131 cgtggtaatccatagtagac 150  Q
    |||| ||||||||| |||||    
T  30991667 cgtgataatccataatagac 30991648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 29 - 150
Target Start/End: Complemental strand, 11650278 - 11650157
Alignment:
Q  29 aaactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataa 128  Q
    ||||||||||| ||| ||||||| ||||||  ||||||||||||| ||||||||||||||||||||||||||||||| ||||  ||||||||||||||||    
T  11650278 aaactagatttctgacccgtgcttcgctcggatttattgtaaagggattgacatacgaataataaaatgcaatatatgatagataacggtgaaaaaataa 11650179  T
Q  129 cacgtggtaatccatagtagac 150  Q
    |||||| |||| ||||||||||    
T  11650178 cacgtgataattcatagtagac 11650157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 9140988 - 9141108
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtg-aaaaaataac 129  Q
    |||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||  | ||||||| ||||||||||    
T  9140988 actagatttttgatccgtgctctgctcgggtttattgtaaagggattgacatacgaataataaaatgaaatatataattagtaacggtgaaaaaaataac 9141087  T
Q  130 acgtggtaatccatagtagac 150  Q
    ||| |||||| ||||||||||    
T  9141088 acgcggtaattcatagtagac 9141108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 29 - 145
Target Start/End: Original strand, 40409170 - 40409285
Alignment:
Q  29 aaactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataa 128  Q
    ||||||||||| ||| || |||||||||||  ||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  40409170 aaactagatttatgacccatgctccgctcggatttattgtaaagggattgacatacgaa-aataaaatgcaatatataataggtaacggtgaaaaaataa 40409268  T
Q  129 cacgtggtaatccatag 145  Q
    |||||| ||||||||||    
T  40409269 cacgtgataatccatag 40409285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 4680512 - 4680631
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataaca 130  Q
    |||| |||||||| ||||| ||| |||| |||||||||||||  ||||||||||||||||||||||||||||||||||||| || ||||||||||||| |    
T  4680512 actatatttttgacccgtgatccactcgggtttattgtaaagagattgacatacgaataataaaatgcaatatataataggtaaaggtgaaaaaataaga 4680611  T
Q  131 cgtggtaatccatagtagac 150  Q
    |||| |||||||||||||||    
T  4680612 cgtgataatccatagtagac 4680631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 30 - 128
Target Start/End: Original strand, 32277648 - 32277746
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataa 128  Q
    |||||||||||| | |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  32277648 aactagattttttacccgtgctccgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataattggtaacggtgaaaaaataa 32277746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 16673997 - 16673877
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaa-aaaataac 129  Q
    |||||||||||||  | |||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||| || ||||||||| ||||||||    
T  16673997 actagatttttgactcatgctccactcgagtttattgtaaagggattgacatacaaataataaaatgcaatatataattggtaacggtgaaaaaaataac 16673898  T
Q  130 acgtggtaatccatagtagac 150  Q
    ||||| |||| ||||||||||    
T  16673897 acgtgataattcatagtagac 16673877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 17648365 - 17648245
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaa-aaaataac 129  Q
    |||||||||||||  | |||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||| || ||||||||| ||||||||    
T  17648365 actagatttttgactcatgctccactcgagtttattgtaaagggattgacatacaaataataaaatgcaatatataattggtaacggtgaaaaaaataac 17648266  T
Q  130 acgtggtaatccatagtagac 150  Q
    ||||| |||| ||||||||||    
T  17648265 acgtgataattcatagtagac 17648245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 205 - 337
Target Start/End: Original strand, 12140642 - 12140776
Alignment:
Q  205 tcggtaatcctttcaataattcgg-tatatataaccaagtttacatgaaaattagggtagccgnnnnnnnn-gtataaaatagaaggcatcaaacgtgat 302  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||  |||||||||||||||         ||||||||||||||| ||||||||||||    
T  12140642 tcggtaatcctatcaataattcgggtatatataaccaagtttacatagaaattagggtagccgaaaaaaaaagtataaaatagaaggtatcaaacgtgat 12140741  T
Q  303 cattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||| ||||||||| ||||||||||    
T  12140742 cattgatatgctcaaagtttctaggacaaacgtgc 12140776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 32 - 150
Target Start/End: Original strand, 45418298 - 45418416
Alignment:
Q  32 ctagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataacac 131  Q
    |||||||||||| ||||||||| |||   ||||||||||||| |||||||||| ||||||||||||||||||||||| |  ||||||||||||||||||     
T  45418298 ctagatttttgacccgtgctccactcagttttattgtaaagggattgacatacaaataataaaatgcaatatataattgataacggtgaaaaaataacat 45418397  T
Q  132 gtggtaatccatagtagac 150  Q
    ||| |||||||||||||||    
T  45418398 gtgataatccatagtagac 45418416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 33 - 150
Target Start/End: Original strand, 16362175 - 16362292
Alignment:
Q  33 tagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataacacg 132  Q
    |||||||||||  |||  |||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||| ||| |||||||| |||    
T  16362175 tagatttttgactcgtattccgctcgggtttattgtaaagggattgacatacgaataataaaatgcactatataataggtaactgtggaaaaataatacg 16362274  T
Q  133 tggtaatccatagtagac 150  Q
    || |||||||||||||||    
T  16362275 tgataatccatagtagac 16362292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 22325111 - 22325016
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    |||||||||||||| || |||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||| || |||||||||||||    
T  22325111 aactagatttttgacccatgctccgctcgagtttattgaaaagagattgacatacgaataataaaatgcaatatataattggtaacggtgaaaaaa 22325016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 219 - 332
Target Start/End: Original strand, 4680700 - 4680814
Alignment:
Q  219 aataattcgg-tatatataaccaagtttacatgaaaattagggtagccgnnnnnnnngtataaaatagaaggcatcaaacgtgatcattgatatgctcat 317  Q
    |||||||||| |||||||||| ||||||||||| |||||||||||||||        ||||||||||||||||||||||||||||| ||||||||||| |    
T  4680700 aataattcgggtatatataactaagtttacatggaaattagggtagccgaaaaaaaagtataaaatagaaggcatcaaacgtgatccttgatatgctcgt 4680799  T
Q  318 agtttctagaacaaa 332  Q
    |||||||||||||||    
T  4680800 agtttctagaacaaa 4680814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 207 - 337
Target Start/End: Original strand, 22773693 - 22773823
Alignment:
Q  207 ggtaatcctttcaataattcgg-tatatataaccaagtttacatgaaaattagggtagccgnnnnnnnngtataaaatagaaggcatcaaacgtgatcat 305  Q
    ||||||| | |||||||||||| |||||||||||||||||||||  |||||||||||||||        ||||||| || |||| |||||||||||||||    
T  22773693 ggtaatcatatcaataattcgggtatatataaccaagtttacatagaaattagggtagccgaaaaaaa-gtataaagtataaggtatcaaacgtgatcat 22773791  T
Q  306 tgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||||||||||||||||||||||||    
T  22773792 tgatatgctcatagtttctagaacaaacgtgc 22773823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 29 - 125
Target Start/End: Original strand, 1565947 - 1566043
Alignment:
Q  29 aaactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    |||||| |||||||| |||||||||||||| |||||||||||||| ||||||||||||| | |||||||||||||||||| || |||||||||||||    
T  1565947 aaactatatttttgacccgtgctccgctcgggtttattgtaaagggattgacatacgaacagtaaaatgcaatatataattgggaacggtgaaaaaa 1566043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 9395975 - 9395913
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9395975 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 9395913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 31 - 128
Target Start/End: Complemental strand, 34838348 - 34838251
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataa 128  Q
    |||| |||||||| ||||| || ||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |  ||||||||||||||||    
T  34838348 actaaatttttgacccgtgttctgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataattgataacggtgaaaaaataa 34838251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 31 - 128
Target Start/End: Original strand, 40449363 - 40449460
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataa 128  Q
    ||||||||||| | |||||| ||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||| |  ||||||||||||||||    
T  40449363 actagatttttaacccgtgccccgatcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataattgataacggtgaaaaaataa 40449460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 27711937 - 27712013
Alignment:
Q  32 ctagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataat 108  Q
    |||||||||||| |||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||    
T  27711937 ctagatttttgacccgtgctccgctcgagtttattataaagatattgacatacgaataataaaatgcaatatataat 27712013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 205 - 337
Target Start/End: Original strand, 4681411 - 4681549
Alignment:
Q  205 tcggtaatcctttcaataattcgg-----tatatataaccaagtttacatgaaaattagggtagccgnnnnnnnn-gtataaaatagaaggcatcaaacg 298  Q
    ||||||||||| ||||||||||||     |||||||||| ||||||||||  |||||||| ||||||         ||||||||||||||||||||||||    
T  4681411 tcggtaatcctatcaataattcgggtatatatatataacgaagtttacatagaaattaggatagccgaaaaaaaaagtataaaatagaaggcatcaaacg 4681510  T
Q  299 tgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    | || ||||||||||||||||||||||||||||||||||    
T  4681511 tcattattgatatgctcatagtttctagaacaaacgtgc 4681549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 21128288 - 21128226
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  21128288 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatggtttctagaacaaacgtgc 21128226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 275 - 332
Target Start/End: Original strand, 11649750 - 11649807
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaa 332  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11649750 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaa 11649807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 275 - 336
Target Start/End: Complemental strand, 22324527 - 22324466
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtg 336  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22324527 gtataaaatagaaggcatcaaacatgatcattgatatgctcatagtttctagaacaaacgtg 22324466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 21128890 - 21128795
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    ||||||||||||||    ||||||| | | |||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  21128890 aactagatttttgacttatgctccgtttgggtttattggaaaggaattgacatacgaataataaaatgcaatatataattggtaacggtgaaaaaa 21128795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 2354523 - 2354585
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  2354523 gtataaaatagaagacatcaaacgtgatcattgatatgctcatagtttttagaacaaacgtgc 2354585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 16492397 - 16492459
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  16492397 gtataaaatagaaggcatcaaatgtgatcattgatatgctcatagtttttagaacaaacgtgc 16492459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 16671850 - 16671788
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  16671850 gtataaaatagaaggcatcaaacgtgatcattgatatgctcaaaatttctagaacaaacgtgc 16671788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 17646218 - 17646156
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  17646218 gtataaaatagaaggcatcaaacgtgatcattgatatgctcaaaatttctagaacaaacgtgc 17646156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 275 - 333
Target Start/End: Complemental strand, 19222357 - 19222299
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaac 333  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  19222357 gtataaaatagaaggcatcaaacgtgatcattgatatactcatagtttctagaacaaac 19222299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 275 - 333
Target Start/End: Original strand, 27712411 - 27712469
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaac 333  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  27712411 gtataaaatagaaggcatcaaacgtgatcatcgatatgctcatagtttctagaacaaac 27712469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 150
Target Start/End: Complemental strand, 35125599 - 35125481
Alignment:
Q  33 tagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtg-aaaaaataacac 131  Q
    |||||||||||  ||||||| |||||||||||||||||||| ||| | ||| | |||||||||||||||||||||| || ||||||| |||||||||||     
T  35125599 tagatttttgactcgtgctctgctcgagtttattgtaaagggattaatatatggataataaaatgcaatatataattggtaacggtgtaaaaaataacat 35125500  T
Q  132 gtggtaatccatagtagac 150  Q
    ||| ||||  |||||||||    
T  35125499 gtgataatttatagtagac 35125481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 275 - 332
Target Start/End: Original strand, 11649811 - 11649868
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaa 332  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  11649811 gtataaaatagaagccatcaaacgtgatcattgatatgctcatagtttctagaacaaa 11649868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 36 - 125
Target Start/End: Complemental strand, 18488008 - 18487919
Alignment:
Q  36 atttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    |||||||| |||||||||||||| |||||| ||||||| |||||||||||||||||||||||||| || |||| || ||| |||||||||    
T  18488008 atttttgacccgtgctccgctcgggtttatagtaaagggattgacatacgaataataaaatgcaaaatgtaattggtaacagtgaaaaaa 18487919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 276 - 336
Target Start/End: Original strand, 1566361 - 1566421
Alignment:
Q  276 tataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtg 336  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  1566361 tataaaatagaaggtatcaaacgtgatcattgatatgctcatagtttctagaacaagcgtg 1566421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 275 - 335
Target Start/End: Complemental strand, 34837762 - 34837702
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgt 335  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  34837762 gtataaaatagaaggcataaaacgtgatcattgatatgctcatagtttctggaacaaacgt 34837702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 205 - 337
Target Start/End: Original strand, 40409294 - 40409427
Alignment:
Q  205 tcggtaatcctttcaataattcgg-tatatataaccaagtttacatgaaaattagggtagccgnnnnnnnngtataaaatagaaggcatcaaacgtgatc 303  Q
    |||||| |||| |||||||||| | |||||||||| ||||||||||  |||||||| ||| ||        |||||||||||||||||||||| ||||||    
T  40409294 tcggtactcctatcaataattcagatatatataacaaagtttacatagaaattaggatagtcgaaaaaaaagtataaaatagaaggcatcaaatgtgatc 40409393  T
Q  304 attgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||| ||| ||| |||||| |||||||    
T  40409394 attgatatgcttatattttatagaacgaacgtgc 40409427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 276 - 337
Target Start/End: Original strand, 45419495 - 45419556
Alignment:
Q  276 tataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||    
T  45419495 tataaaatagaaggcatcaaacgtgatcattgatatgctcatgatttttagaacaaacgtgc 45419556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 6250540 - 6250421
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaa-aaaataac 129  Q
    ||||||||||||| ||| ||||||| |  |||||||||||||| |||||||||  |||||||||||| |||||||||| || ||||||||| ||||||||    
T  6250540 actagatttttgacccg-gctccgcccaggtttattgtaaagggattgacatataaataataaaatgtaatatataattggtaacggtgaaaaaaataac 6250442  T
Q  130 acgtggtaatccatagtagac 150  Q
    || || |||| |||| |||||    
T  6250441 acatgataattcataatagac 6250421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 9141820 - 9141882
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||| ||||    
T  9141820 gtataaaatagaaggtatcaaacgtaatcattgatatgttcatagtttctagaacaaatgtgc 9141882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 11649872 - 11649934
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||| ||||||||||||||||||||||||| || |||||| ||||||||||||    
T  11649872 gtataaaatagaagccatcaaacgtgatcattgatatgcttatggtttctggaacaaacgtgc 11649934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 22967792 - 22967882
Alignment:
Q  61 tttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtg-aaaaaataacacgtggtaatccatagtagac 150  Q
    |||||||| |||| |||||||||| ||||||||||||||||||||||| || || |||| |||||| |||| ||| |||||||||||||||    
T  22967792 tttattgttaagggattgacatacaaataataaaatgcaatatataattggtaagggtgaaaaaaagaacaggtgataatccatagtagac 22967882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 48639025 - 48639134
Alignment:
Q  40 ttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataacacgtggtaat 139  Q
    |||| ||||||||||||||  ||||||| |||   |||||||||| |||||||||||| |||||||||| |  ||||||| |||||||||||||| ||||    
T  48639025 ttgacccgtgctccgctcggatttattgcaaatagattgacatacaaataataaaatgtaatatataattgataacggtg-aaaaataacacgtgataat 48639123  T
Q  140 ccatagtagac 150  Q
     ||||||||||    
T  48639124 tcatagtagac 48639134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 60 - 125
Target Start/End: Original strand, 40686184 - 40686249
Alignment:
Q  60 gtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||| || ||| |||||||||    
T  40686184 gtttattataaaggaattgacatgcgaataataaaatgcaatatataattggtaacagtgaaaaaa 40686249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 125
Target Start/End: Original strand, 11642147 - 11642235
Alignment:
Q  38 ttttgatccgtgctccgctcgag-tttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    |||| |||||||||||||||| | ||||||||||| ||||||| ||||||| |||||||||||||||||||  || || ||||||||||    
T  11642147 ttttcatccgtgctccgctcggggtttattgtaaaagaattgatatacgaaaaataaaatgcaatatataaatggtaatggtgaaaaaa 11642235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 9396279 - 9396217
Alignment:
Q  205 tcggtaatcctttcaataattcgg-tatatataaccaagtttacatgaaaattagggtagccg 266  Q
    ||||||||| | |||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  9396279 tcggtaatcatatcaataattcgggtatatataaccaagtttacatggaaattagggtagccg 9396217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 291 - 337
Target Start/End: Original strand, 16362565 - 16362611
Alignment:
Q  291 atcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||    
T  16362565 atcaaacgtgatcattaatatgctcatagtttctagaacaaacgtgc 16362611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 125
Target Start/End: Original strand, 16491612 - 16491706
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    ||||||||||| | ||||  ||| ||  |||||||||||||||||||||  ||| ||||||||||| ||||||||||| || |||||||||||||    
T  16491612 actagatttttcacccgtattccacttaagtttattgtaaaggaattgatttacaaataataaaatacaatatataattggtaacggtgaaaaaa 16491706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 16671492 - 16671431
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||| ||||| ||| |||||||||||||||||||||| |||||||||||||||||||||    
T  16671492 gtataaaagagaag-cattaaacgtgatcattgatatgctcgtagtttctagaacaaacgtgc 16671431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 17645860 - 17645799
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||| ||||| ||| |||||||||||||||||||||| |||||||||||||||||||||    
T  17645860 gtataaaagagaag-cattaaacgtgatcattgatatgctcgtagtttctagaacaaacgtgc 17645799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 275 - 332
Target Start/End: Complemental strand, 9396036 - 9395979
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaa 332  Q
    |||||||||||||| |||||||||| |||||||| ||||||||||||| |||||||||    
T  9396036 gtataaaatagaagtcatcaaacgtcatcattgacatgctcatagtttttagaacaaa 9395979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 275 - 328
Target Start/End: Complemental strand, 18487396 - 18487343
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaa 328  Q
    |||||||||||||| ||||||||||||||||||||||||||  |||||||||||    
T  18487396 gtataaaatagaagccatcaaacgtgatcattgatatgctcgaagtttctagaa 18487343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 266
Target Start/End: Original strand, 48640512 - 48640551
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtagccg 266  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  48640512 ggtatatataaccaagtttacatgaaaattagggtagccg 48640551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 35 - 125
Target Start/End: Complemental strand, 21225146 - 21225056
Alignment:
Q  35 gatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    ||||||||| ||||| |||| | | |||||||  ||||  ||||||||| |||||||||| ||||||||||||| || |||||||||||||    
T  21225146 gatttttgacccgtgttccgtttgggtttatttcaaagagattgacatatgaataataaattgcaatatataattggtaacggtgaaaaaa 21225056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 325
Target Start/End: Original strand, 40449963 - 40450013
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttcta 325  Q
    |||||||||||||| |||||||  |||||||||||||||||||||||||||    
T  40449963 gtataaaatagaagacatcaaatttgatcattgatatgctcatagtttcta 40450013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 5553562 - 5553639
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataat 108  Q
    |||||||| |||| ||||||  |||  ||||||||||| |||| ||||||||| ||||||||||||| ||||||||||    
T  5553562 actagattgttgacccgtgcgacgcatgagtttattgttaagggattgacatatgaataataaaatgaaatatataat 5553639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 125
Target Start/End: Original strand, 16375464 - 16375529
Alignment:
Q  60 gtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    ||||||||| |||| ||| |||||||| |||||||||| |||||||||| || |||||||||||||    
T  16375464 gtttattgttaagggattaacatacgagtaataaaatgtaatatataattggtaacggtgaaaaaa 16375529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 330
Target Start/End: Original strand, 2354462 - 2354517
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaaca 330  Q
    |||||||||||||||| ||||||||||||| |||| || |||||||||||| ||||    
T  2354462 gtataaaatagaaggcgtcaaacgtgatcactgatgtgatcatagtttctaaaaca 2354517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 266
Target Start/End: Complemental strand, 19222734 - 19222695
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtagccg 266  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  19222734 ggtatatataaccaagtttacatggaaattagggtagccg 19222695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 266
Target Start/End: Complemental strand, 21128665 - 21128626
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtagccg 266  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  21128665 ggtatatataaccaagtttacatggaaattagggtagccg 21128626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 266
Target Start/End: Complemental strand, 22324884 - 22324845
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtagccg 266  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  22324884 ggtatatataaccaagtttacatggaaattagggtagccg 22324845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 266
Target Start/End: Original strand, 27712162 - 27712201
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtagccg 266  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  27712162 ggtatatataaccaagtttacatgaaaattaggttagccg 27712201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 2354226 - 2354276
Alignment:
Q  217 tcaataattcgg-tatatataaccaagtttacatgaaaattagggtagccg 266  Q
    |||||||||||| |||||||||||||||||| ||| |||||||||||||||    
T  2354226 tcaataattcgggtatatataaccaagtttatatggaaattagggtagccg 2354276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 266
Target Start/End: Complemental strand, 16672141 - 16672103
Alignment:
Q  228 gtatatataaccaagtttacatgaaaattagggtagccg 266  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  16672141 gtatatataaccaagtttacatggaaattagggtagccg 16672103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 266
Target Start/End: Complemental strand, 17646509 - 17646471
Alignment:
Q  228 gtatatataaccaagtttacatgaaaattagggtagccg 266  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  17646509 gtatatataaccaagtttacatggaaattagggtagccg 17646471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 108
Target Start/End: Original strand, 24787353 - 24787431
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataat 108  Q
    ||||||||| |||| ||||||  ||| | |||||||| | |||| |||||||||  |||||||||||||||||||||||    
T  24787353 aactagattgttgacccgtgcgtcgcacaagtttattattaagggattgacataaaaataataaaatgcaatatataat 24787431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 16362349 - 16362406
Alignment:
Q  207 ggtaatcctttcaataattcgg-tatatataaccaagtttacatgaaaattagggtag 263  Q
    ||||||| | ||||||||| || |||||||||||||||||||||| ||||||||||||    
T  16362349 ggtaatcatatcaataatttgggtatatataaccaagtttacatggaaattagggtag 16362406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 32277870 - 32277907
Alignment:
Q  229 tatatataaccaagtttacatgaaaattagggtagccg 266  Q
    |||||||||||||||||||||| |||||||||||||||    
T  32277870 tatatataaccaagtttacatggaaattagggtagccg 32277907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 40449584 - 40449625
Alignment:
Q  225 tcggtatatataaccaagtttacatgaaaattagggtagccg 266  Q
    |||||||| ||||||||||||||||| |||||||||||||||    
T  40449584 tcggtataaataaccaagtttacatggaaattagggtagccg 40449625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 318
Target Start/End: Complemental strand, 6250071 - 6250027
Alignment:
Q  275 gtataaaatagaaggcatca-aacgtgatcattgatatgctcata 318  Q
    |||||||||||||||||||| || |||||||||||||||||||||    
T  6250071 gtataaaatagaaggcatcataaggtgatcattgatatgctcata 6250027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 266
Target Start/End: Original strand, 16491833 - 16491872
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtagccg 266  Q
    ||||||||||| |||||||||||| |||||||||||||||    
T  16491833 ggtatatataatcaagtttacatggaaattagggtagccg 16491872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 266
Target Start/End: Complemental strand, 28170483 - 28170444
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtagccg 266  Q
    |||||||||||| ||||||||||| |||||||||||||||    
T  28170483 ggtatatataacgaagtttacatggaaattagggtagccg 28170444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 337
Target Start/End: Original strand, 23591521 - 23591551
Alignment:
Q  307 gatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||||||||||||||||||||    
T  23591521 gatatgctcatagtttctagaacaaacgtgc 23591551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 337
Target Start/End: Complemental strand, 34837653 - 34837623
Alignment:
Q  307 gatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||||||||||||||||||||    
T  34837653 gatatgctcatagtttctagaacaaacgtgc 34837623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 263
Target Start/End: Original strand, 1566175 - 1566211
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtag 263  Q
    |||||||||||||||||||||||| |||||| |||||    
T  1566175 ggtatatataaccaagtttacatggaaattatggtag 1566211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 3e-48; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 205 - 337
Target Start/End: Complemental strand, 47769271 - 47769138
Alignment:
Q  205 tcggtaatcctttcaataattcgg-tatatataaccaagtttacatgaaaattagggtagccgnnnnnnnngtataaaatagaaggcatcaaacgtgatc 303  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  47769271 tcggtaatcctatcaataattcgggtatatataaccaagtttacatgaaaattagggtagccgaaaaaaaagtataaaatagaaggcatcaaacgtgatc 47769172  T
Q  304 attgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||||||||||||||||||||||||||    
T  47769171 attgatatgctcatagtttctagaacaaacgtgc 47769138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 48076852 - 48076733
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataaca 130  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||    
T  48076852 actagatttttgacccgtgctccgctcgagtttattgtaaagggattgacatacgaataataaaatgcaatatatgataggtaacggagaaaaaataaca 48076753  T
Q  131 cgtggtaatccatagtagac 150  Q
     ||| |||||||||||||||    
T  48076752 tgtgataatccatagtagac 48076733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 33 - 150
Target Start/End: Original strand, 12795493 - 12795610
Alignment:
Q  33 tagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataacacg 132  Q
    ||||||||||| ||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  12795493 tagatttttgacccgtgcttcgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataataggtaatggtgaaaaaataacacg 12795592  T
Q  133 tggtaatccatagtagac 150  Q
    || |||| ||||||||||    
T  12795593 tgataattcatagtagac 12795610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 205 - 337
Target Start/End: Original strand, 23952292 - 23952425
Alignment:
Q  205 tcggtaatcctttcaataattcg-gtatatataaccaagtttacatgaaaattagggtagccgnnnnnnnngtataaaatagaaggcatcaaacgtgatc 303  Q
    ||||||||||| ||||||||| | ||||||||| ||||||||||||  |||||||||||||||        |||||||||||||||||||||||||||||    
T  23952292 tcggtaatcctatcaataattagagtatatatacccaagtttacatagaaattagggtagccgaaaaaaaagtataaaatagaaggcatcaaacgtgatc 23952391  T
Q  304 attgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||||||||||||||||||||||||||    
T  23952392 attgatatgctcatagtttctagaacaaacgtgc 23952425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 33 - 150
Target Start/End: Original strand, 32010482 - 32010599
Alignment:
Q  33 tagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataacacg 132  Q
    ||||||||||| |||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||    
T  32010482 tagatttttgacccgtgctccgcttgggtttattgtaaagggattgacatacgaataataaaatgcaatatattataggtaacgatgaaaaaataacacg 32010581  T
Q  133 tggtaatccatagtagac 150  Q
    || |||| ||||||||||    
T  32010582 tgataattcatagtagac 32010599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 29 - 150
Target Start/End: Complemental strand, 36639845 - 36639720
Alignment:
Q  29 aaactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaa---- 124  Q
    ||||||||||||||| |||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||        
T  36639845 aaactagatttttgacccgtacttcgctcgggtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggtaacggtgaaaaaataa 36639746  T
Q  125 ataacacgtggtaatccatagtagac 150  Q
    |||||||||| ||||| |||||||||    
T  36639745 ataacacgtgataatctatagtagac 36639720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 28 - 150
Target Start/End: Complemental strand, 47769448 - 47769326
Alignment:
Q  28 taaactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaata 127  Q
    ||||||||||||||||   ||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  47769448 taaactagatttttgacttgtgctccgctcggatttattgtaaagggattgacatacgaataataaaatgcaatatataataggtaatggtgaaaaaata 47769349  T
Q  128 acacgtggtaatccatagtagac 150  Q
    ||||||  ||||||||| |||||    
T  47769348 acacgttataatccataatagac 47769326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 37325386 - 37325267
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataaca 130  Q
    ||||||||||||| ||||||||| |||| ||||||||||||   ||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||    
T  37325386 actagatttttgacccgtgctccactcgggtttattgtaaatagattgacataagaataataaaatgcaatatataataggtaaccgtgaaaaaataaca 37325287  T
Q  131 cgtggtaatccatagtagac 150  Q
    || | |||||||||||||||    
T  37325286 cgcgataatccatagtagac 37325267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 28 - 150
Target Start/End: Original strand, 8478509 - 8478631
Alignment:
Q  28 taaactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaata 127  Q
    |||| |||||||||||  |||||||||||   |||||||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  8478509 taaattagatttttgactcgtgctccgcttatgtttattgtaaagggattgacatacaaataataaaatgcaatatataataggtaacggtgaaaaaata 8478608  T
Q  128 acacgtggtaatccatagtagac 150  Q
    ||| ||| ||||| |||||||||    
T  8478609 acatgtgataatctatagtagac 8478631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 205 - 337
Target Start/End: Complemental strand, 36639665 - 36639531
Alignment:
Q  205 tcggtaatcctttcaataattcgg-tatatataaccaagtttacatgaaaattagggtagccgnnnnnnnn-gtataaaatagaaggcatcaaacgtgat 302  Q
    ||||||||||| |||||||||||| |||||||||||||| ||||||| |||||||||||||||         ||||||||||||||||||| ||||||||    
T  36639665 tcggtaatcctatcaataattcgggtatatataaccaagcttacatggaaattagggtagccgaaaaaaaaagtataaaatagaaggcatctaacgtgat 36639566  T
Q  303 cattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||||||| ||||||||||||||||    
T  36639565 cattgatatgctcatagtgtctagaacaaacgtgc 36639531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 31 - 125
Target Start/End: Original strand, 54652880 - 54652974
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    ||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||    
T  54652880 actagattttttatccgtgctccgttcgagtttattgtaaagggattgacatacgaataataaaatgcaatatataattggtaacggtgaaaaaa 54652974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 30 - 150
Target Start/End: Original strand, 2479029 - 2479150
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtg-aaaaaataa 128  Q
    |||||||||||||| |||||||| ||||| |||||||||||||| ||||||||| |||| ||||||||||||||||||| || ||||||| |||||||||    
T  2479029 aactagatttttgacccgtgctctgctcgggtttattgtaaagggattgacatatgaatgataaaatgcaatatataattggtaacggtgaaaaaaataa 2479128  T
Q  129 cacgtggtaatccatagtagac 150  Q
    |||||| |||| ||||||||||    
T  2479129 cacgtgataattcatagtagac 2479150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 32 - 141
Target Start/End: Original strand, 23952123 - 23952231
Alignment:
Q  32 ctagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataacac 131  Q
    |||||||| | | |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  23952123 ctagatttatcacccgtgctccgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataataggtaa-ggtgaaaaaataacac 23952221  T
Q  132 gtggtaatcc 141  Q
    ||| ||||||    
T  23952222 gtgataatcc 23952231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 47427774 - 47427894
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtg-aaaaaataac 129  Q
    ||||||||||| ||||||||||||||||  ||||||||||| | ||||||||| |||||||||||||||||||||||| || ||||||| ||||||||||    
T  47427774 actagattttttatccgtgctccgctcggatttattgtaaaaggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaaataac 47427873  T
Q  130 acgtggtaatccatagtagac 150  Q
    | ||| |||||||||||||||    
T  47427874 atgtgataatccatagtagac 47427894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 205 - 332
Target Start/End: Original strand, 21581004 - 21581131
Alignment:
Q  205 tcggtaatcctttcaataattcgg-tatatataaccaagtttacatgaaaattagggtagccgnnnnnnnngtataaaatagaaggcatcaaacgtgatc 303  Q
    ||||||||||| ||||||||| || ||||||||||||| |||||||| |||||||||||||||        |||||||||||||||||||||||||||||    
T  21581004 tcggtaatcctatcaataatttggatatatataaccaattttacatggaaattagggtagccgaaaaaaa-gtataaaatagaaggcatcaaacgtgatc 21581102  T
Q  304 attgatatgctcatagtttctagaacaaa 332  Q
    ||||| |||||||||||||||||||||||    
T  21581103 attgacatgctcatagtttctagaacaaa 21581131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 31 - 125
Target Start/End: Original strand, 52688587 - 52688681
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    ||||||||||||| |||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||| || |||||||||||||    
T  52688587 actagatttttgacccgtgctccgctcgggtttattgtaaagggattgacatacaaataataaaatgcaatatataattggtaacggtgaaaaaa 52688681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 33 - 150
Target Start/End: Complemental strand, 29968652 - 29968535
Alignment:
Q  33 tagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataacacg 132  Q
    |||||||| ||  ||||||||||||| |||||||||| ||| ||||||||||||||||| |||||||||||||||| || |||||||||||||||||||     
T  29968652 tagattttagactcgtgctccgctcgggtttattgtatagggattgacatacgaataatgaaatgcaatatataattggtaacggtgaaaaaataacact 29968553  T
Q  133 tggtaatccatagtagac 150  Q
    || |||| ||||||||||    
T  29968552 tgataatacatagtagac 29968535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 14989432 - 14989313
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataaca 130  Q
    ||||||||||||| ||||||| || ||| |||||| ||||||  ||||||||||||||| |||||| |||||||||||||  ||||||||||||| ||||    
T  14989432 actagatttttgacccgtgcttcgttcgggtttatcgtaaagagattgacatacgaatactaaaattcaatatataatagttaacggtgaaaaaaaaaca 14989333  T
Q  131 cgtggtaatccatagtagac 150  Q
    |||| |||||||||||||||    
T  14989332 cgtgataatccatagtagac 14989313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 45 - 150
Target Start/End: Complemental strand, 24051013 - 24050908
Alignment:
Q  45 ccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataacacgtggtaatccata 144  Q
    |||||||||||||| ||||||||||||   ||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||| ||||  |||    
T  24051013 ccgtgctccgctcgggtttattgtaaaaagattgacatacgaataataaaatgcaatatataattagtaacggtgaaaaaataacacgtgataatttata 24050914  T
Q  145 gtagac 150  Q
    ||||||    
T  24050913 gtagac 24050908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 28379292 - 28379387
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    |||||||||||||| ||||||||| ||||  ||||||||||||| |||||||||||||||||||||||||||||||||| || || ||||||||||    
T  28379292 aactagatttttgacccgtgctccactcggatttattgtaaagggattgacatacgaataataaaatgcaatatataattggtaatggtgaaaaaa 28379387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 28813994 - 28813899
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    |||||||||||||| |||||||||| |||  |||||||| |||||||||||||||||||| |||||||||||||||||| || |||||||||||||    
T  28813994 aactagatttttgacccgtgctccgatcggatttattgtgaaggaattgacatacgaatattaaaatgcaatatataattggtaacggtgaaaaaa 28813899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 30 - 128
Target Start/End: Complemental strand, 8119373 - 8119275
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataa 128  Q
    |||||||||||| | |||||||| ||||| |||||||| ||||| |||||||||||||||||||||||||||||||||| |  ||||||||||||||||    
T  8119373 aactagattttttacccgtgctctgctcgggtttattgcaaagggattgacatacgaataataaaatgcaatatataattgttaacggtgaaaaaataa 8119275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 44501017 - 44500945
Alignment:
Q  36 atttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataat 108  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  44501017 atttttgacccgtgctccgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataat 44500945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 125
Target Start/End: Complemental strand, 2177901 - 2177814
Alignment:
Q  38 ttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    |||||| ||||| |||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||| || |||||||||||||    
T  2177901 ttttgacccgtgttccgctcgggtttattgtaaagggattggcatacgaataataaaatgcaatatataattggtaacggtgaaaaaa 2177814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 8397604 - 8397666
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  8397604 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttgtagaacaaacgtgc 8397666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 12795977 - 12796039
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  12795977 gtataaaatagaaagcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 12796039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 30 - 108
Target Start/End: Original strand, 18000250 - 18000328
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataat 108  Q
    |||||||||||| | |||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  18000250 aactagattttttacccgtgctccgctcgggtttattgtaaagggattgacaaacgaataataaaatgcaatatataat 18000328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 29967381 - 29967319
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  29967381 gtataaaatagaaggcatcaaacgtgatcatcgatatgctcatagtttctagaacaaacgtgc 29967319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 33 - 108
Target Start/End: Complemental strand, 4942468 - 4942394
Alignment:
Q  33 tagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataat 108  Q
    ||||||||| ||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  4942468 tagattttt-atccgcgctccgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataat 4942394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 209 - 319
Target Start/End: Original strand, 32962746 - 32962857
Alignment:
Q  209 taatcctttcaataattcgg-tatatataaccaagtttacatgaaaattagggtagccgnnnnnnnngtataaaatagaaggcatcaaacgtgatcattg 307  Q
    ||||||| |||||||||||| |||||||||  |||||||||| ||||||||||||||||        |||||||||||||||||||||||||||| || |    
T  32962746 taatcctatcaataattcgggtatatataattaagtttacataaaaattagggtagccgaaaaaaaagtataaaatagaaggcatcaaacgtgataatcg 32962845  T
Q  308 atatgctcatag 319  Q
    ||||||||||||    
T  32962846 atatgctcatag 32962857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 8479004 - 8479066
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8479004 gtatagaatagaagacatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 8479066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 21581135 - 21581197
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21581135 gtataaaataaaagacatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 21581197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 24049530 - 24049468
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24049530 gtataaaatagaggacatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 24049468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 24049811 - 24049749
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  24049811 gtataaagtagaatgcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 24049749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 52689277 - 52689339
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  52689277 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagagaaaacgtgc 52689339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 275 - 332
Target Start/End: Complemental strand, 47631838 - 47631781
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaa 332  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  47631838 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttttagaacaaa 47631781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 61 - 124
Target Start/End: Complemental strand, 22293729 - 22293666
Alignment:
Q  61 tttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaa 124  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||    
T  22293729 tttattgtaaagggattgacatacgaataataaaatgcaatatataattggtaacggtgaaaaa 22293666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 61 - 147
Target Start/End: Original strand, 41850895 - 41850982
Alignment:
Q  61 tttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtga-aaaaataacacgtggtaatccatagta 147  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |  |||||||| |||||||||| ||  ||||||||||||    
T  41850895 tttatcgtaaaggaattgacatacgaataataaaatgcaatatataattgataacggtgagaaaaataacatgttataatccatagta 41850982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 8396882 - 8396960
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaag-gaattgacatacgaataataaaatgcaatatataat 108  Q
    ||||||||||||| |||||||||||||| |||||||| |||  | ||||||||||||||||||||||||||||||||||    
T  8396882 actagatttttgacccgtgctccgctcgggtttattgcaaaaaggattgacatacgaataataaaatgcaatatataat 8396960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 12899801 - 12899739
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  12899801 gtataaaatagaagacatcaaatgtgattattgatatgctcatagtttctagaacaaacgtgc 12899739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 52689478 - 52689540
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  52689478 gtataaaatagaagacatcaaacgtgatcattgatatgctcatagtttttaggacaaacgtgc 52689540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 275 - 332
Target Start/End: Original strand, 8397484 - 8397541
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaa 332  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  8397484 gtataaaatagaagacatcaaacgtgatcattgatatgttcatagtttctagaacaaa 8397541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 275 - 332
Target Start/End: Original strand, 8478944 - 8479001
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaa 332  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  8478944 gtataaaatagaaggcatcaaacgtgatctttgatatgctcatagtttttagaacaaa 8479001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 49 - 125
Target Start/End: Original strand, 53143031 - 53143107
Alignment:
Q  49 gctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    |||| ||||| |||||||||||||| |||||||||| ||||||||||||||||||||||| |  |||||||||||||    
T  53143031 gctctgctcgggtttattgtaaagggattgacatacaaataataaaatgcaatatataattgataacggtgaaaaaa 53143107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 150
Target Start/End: Original strand, 21580846 - 21580949
Alignment:
Q  47 gtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataacacgtggtaatccatagt 146  Q
    ||||||||||||  ||||||||||||| |||||| ||| ||||||||||||  ||||||||||   || ||||||||||||||||||| ||||  |||||    
T  21580846 gtgctccgctcggatttattgtaaagggattgacttacaaataataaaatgtcatatataataattaatggtgaaaaaataacacgtgataatttatagt 21580945  T
Q  147 agac 150  Q
    ||||    
T  21580946 agac 21580949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 22293141 - 22293079
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||| ||||||| |||||| ||||| |||||||||||||||||||||||||||    
T  22293141 gtataaaatagaagccatcaaaagtgatcgttgatttgctcatagtttctagaacaaacgtgc 22293079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 54653510 - 54653572
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||| ||||||||||| |||||||||| |||||||||||||| ||||||||||||||    
T  54653510 gtataaaatataaggcatcaaatgtgatcattgttatgctcatagtttatagaacaaacgtgc 54653572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 125
Target Start/End: Complemental strand, 7822392 - 7822290
Alignment:
Q  28 taaactagattttt-gatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataat----aaaatgcaatatataataggcaacggtgaaa 122  Q
    |||||||||||||| || |||||||||||||| |||||||||||||| |||||| ||| ||||||    ||||||||||||||||| || |||| |||||    
T  7822392 taaactagattttttgacccgtgctccgctcgggtttattgtaaagggattgacgtacaaataataaaaaaaatgcaatatataattggtaacgatgaaa 7822293  T
Q  123 aaa 125  Q
    |||    
T  7822292 aaa 7822290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 279 - 332
Target Start/End: Original strand, 53144712 - 53144765
Alignment:
Q  279 aaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaa 332  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  53144712 aaaatagaaggcatcaaacgttatcattgatatgctcatagtttctcgaacaaa 53144765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 276 - 332
Target Start/End: Original strand, 12795917 - 12795973
Alignment:
Q  276 tataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaa 332  Q
    ||||||||||||| |||||||||||||||||||||| || |||||||||||||||||    
T  12795917 tataaaatagaagacatcaaacgtgatcattgatatacttatagtttctagaacaaa 12795973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 280 - 336
Target Start/End: Original strand, 41852009 - 41852065
Alignment:
Q  280 aaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtg 336  Q
    |||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  41852009 aaataggaggcgtcaaacgtgaccattgatatgctcatagtttctagaacaaacgtg 41852065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 52688741 - 52688801
Alignment:
Q  65 ttgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    ||||||||| |||||||||| ||||||||||||||||||||||| || |||||||||||||    
T  52688741 ttgtaaagggattgacatacaaataataaaatgcaatatataattggtaacggtgaaaaaa 52688801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 15465068 - 15464994
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatat 105  Q
    ||||||||||||| |||||||||||||| ||||||||||||||  |||||| || |||||| ||||||| |||||    
T  15465068 actagatttttgacccgtgctccgctcgggtttattgtaaagggcttgacagacaaataatcaaatgcattatat 15464994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 32962629 - 32962677
Alignment:
Q  85 gaataataaaatgcaatatataataggcaacggtgaaaaaataacacgt 133  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  32962629 gaataatagaatgcaatatataatagacaacggtgaaaaaataacacgt 32962677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 266
Target Start/End: Complemental strand, 12900021 - 12899982
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtagccg 266  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  12900021 ggtatatataaccaagtttacatgaaaattagggtagccg 12899982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 317
Target Start/End: Complemental strand, 7821748 - 7821706
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcat 317  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  7821748 gtataaaataaaaggcatcaaacgtgatcattgatatgctcat 7821706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 8478698 - 8478748
Alignment:
Q  217 tcaataattcgg-tatatataaccaagtttacatgaaaattagggtagccg 266  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  8478698 tcaataattcgggtatatataaccaagtttacatgaaaattagtgtagccg 8478748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 333
Target Start/End: Complemental strand, 47631776 - 47631718
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaac 333  Q
    ||||||||| |||| ||||||||||||||||||||| || ||| |||||||||||||||    
T  47631776 gtataaaattgaagacatcaaacgtgatcattgataggcccattgtttctagaacaaac 47631718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 7809752 - 7809712
Alignment:
Q  277 ataaaatagaaggcatcaaacgtgatcattgatatgctcat 317  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  7809752 ataaaatagaaggcatcaaacgtggtcattgatatgctcat 7809712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 266
Target Start/End: Complemental strand, 4942248 - 4942209
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtagccg 266  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  4942248 ggtatatataaccaagtttacatggaaattagggtagccg 4942209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 266
Target Start/End: Original strand, 8397123 - 8397162
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtagccg 266  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  8397123 ggtatatataaccaagtttacatggaaattagggtagccg 8397162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 10467049 - 10466991
Alignment:
Q  89 aataaaatgcaatatataataggcaacggtgaa--aaaataacacgtggtaatccatag 145  Q
    |||||||||||||||||||| || |||||||||  ||||||||||||| ||||||||||    
T  10467049 aataaaatgcaatatataattggtaacggtgaaaaaaaataacacgtgataatccatag 10466991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 12795665 - 12795724
Alignment:
Q  205 tcggtaatcctttcaataattcgg-tatatataaccaagtttacatgaaaattagggtag 263  Q
    ||||||||| | |||||||||||| ||||||||||||| |||||||| ||||||||||||    
T  12795665 tcggtaatcatatcaataattcgggtatatataaccaaatttacatggaaattagggtag 12795724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 266
Target Start/End: Complemental strand, 28813770 - 28813731
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtagccg 266  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  28813770 ggtatatataaccaagtttacatggaaattagggtagccg 28813731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 7812905 - 7812861
Alignment:
Q  28 taaactagatttttgatccgtgctccgctcgagtttattgtaaag 72  Q
    |||||||||||||||| |||||||||||||| |||| ||||||||    
T  7812905 taaactagatttttgacccgtgctccgctcgggttttttgtaaag 7812861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 266
Target Start/End: Complemental strand, 2177683 - 2177644
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtagccg 266  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  2177683 ggtatatataaccaagtttacatggagattagggtagccg 2177644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 266
Target Start/End: Complemental strand, 8119155 - 8119116
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtagccg 266  Q
    |||||||||||||||||||||||  |||||||||||||||    
T  8119155 ggtatatataaccaagtttacatagaaattagggtagccg 8119116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 266
Target Start/End: Original strand, 18001776 - 18001815
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtagccg 266  Q
    |||||| ||||||||||||||||| |||||||||||||||    
T  18001776 ggtatacataaccaagtttacatggaaattagggtagccg 18001815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 266
Target Start/End: Complemental strand, 22293534 - 22293495
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtagccg 266  Q
    |||||||||||||||||||||||| |||||||| ||||||    
T  22293534 ggtatatataaccaagtttacatggaaattaggatagccg 22293495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 266
Target Start/End: Complemental strand, 24050239 - 24050200
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtagccg 266  Q
    |||||||||||||||||||||||| |||||||| ||||||    
T  24050239 ggtatatataaccaagtttacatggaaattaggatagccg 24050200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 266
Target Start/End: Original strand, 28379523 - 28379562
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtagccg 266  Q
    ||||||| |||||||||||||||| |||||||||||||||    
T  28379523 ggtatatgtaaccaagtttacatggaaattagggtagccg 28379562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 333
Target Start/End: Complemental strand, 4941917 - 4941864
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaac 333  Q
    |||||||||| ||| ||||||||||||||     |||||||||||||||||||||||||    
T  4941917 gtataaaataaaagccatcaaacgtgatc-----tatgctcatagtttctagaacaaac 4941864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 337
Target Start/End: Complemental strand, 22292896 - 22292866
Alignment:
Q  307 gatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||||||||||||||||||||    
T  22292896 gatatgctcatagtttctagaacaaacgtgc 22292866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 337
Target Start/End: Original strand, 28379869 - 28379899
Alignment:
Q  307 gatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||||||||||||||||||||    
T  28379869 gatatgctcatagtttctagaacaaacgtgc 28379899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 336
Target Start/End: Complemental strand, 8118596 - 8118567
Alignment:
Q  307 gatatgctcatagtttctagaacaaacgtg 336  Q
    ||||||||||||||||||||||||||||||    
T  8118596 gatatgctcatagtttctagaacaaacgtg 8118567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 266
Target Start/End: Complemental strand, 7812676 - 7812644
Alignment:
Q  234 ataaccaagtttacatgaaaattagggtagccg 266  Q
    ||||||||||||||||| |||||||||||||||    
T  7812676 ataaccaagtttacatggaaattagggtagccg 7812644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 97; Significance: 1e-47; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 30 - 150
Target Start/End: Complemental strand, 16529444 - 16529324
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataac 129  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||    
T  16529444 aactggatttttgatccgtgctccgctcgagtttattgtaaagggattgacatacgaataatgaaatgcaatatatgataggtaacggtgaaaaaataac 16529345  T
Q  130 acgtggtaatccatagtagac 150  Q
    ||||| |||||||||||||||    
T  16529344 acgtgataatccatagtagac 16529324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 28 - 150
Target Start/End: Original strand, 43394561 - 43394683
Alignment:
Q  28 taaactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaata 127  Q
    |||||||||||||||||||||| | |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  43394561 taaactagatttttgatccgtgtttcgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataataggtaacggtgaaaaaata 43394660  T
Q  128 acacgtggtaatccatagtagac 150  Q
    ||||||| ||||||| |||||||    
T  43394661 acacgtgataatccaaagtagac 43394683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 30 - 150
Target Start/End: Original strand, 7672741 - 7672861
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataac 129  Q
    ||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||| |||||||||||||||||||||| || ||||||||||||||    
T  7672741 aactagatttttgatccgtgctccgctcgggtttattgtatagggattgacatacgaatgataaaatgcaatatataataggtaatggtgaaaaaataac 7672840  T
Q  130 acgtggtaatccatagtagac 150  Q
    ||||| |||||||||||||||    
T  7672841 acgtgataatccatagtagac 7672861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 33 - 148
Target Start/End: Complemental strand, 10410012 - 10409897
Alignment:
Q  33 tagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataacacg 132  Q
    ||||||||||| ||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  10410012 tagatttttgacccgtgctccactcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataatagataacggtgaaaaaataacacg 10409913  T
Q  133 tggtaatccatagtag 148  Q
    || |||||||||||||    
T  10409912 tgataatccatagtag 10409897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 30 - 150
Target Start/End: Original strand, 41092265 - 41092385
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataac 129  Q
    |||||||||||||| | |||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  41092265 aactagatttttgaccagtgctccgctcgggtttattgtaaagtgattgacatacgaataataaaatgcaatatataataggtaacggtgagaaaataac 41092364  T
Q  130 acgtggtaatccatagtagac 150  Q
    ||||| |||| ||||||||||    
T  41092365 acgtgataattcatagtagac 41092385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 33 - 150
Target Start/End: Original strand, 14164205 - 14164324
Alignment:
Q  33 tagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtg--aaaaaataaca 130  Q
    |||||||||||||||||||||| ||| |||||||||||| | ||||||||| |||||||||||||||||||||||| || |||||||  |||||||||||    
T  14164205 tagatttttgatccgtgctccgttcgggtttattgtaaaaggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaaaataaca 14164304  T
Q  131 cgtggtaatccatagtagac 150  Q
    |||| |||||||||||||||    
T  14164305 cgtgataatccatagtagac 14164324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 30 - 150
Target Start/End: Complemental strand, 16538283 - 16538163
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataac 129  Q
    ||||||||||||||  ||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||| ||||| || |||||||||||||     
T  16538283 aactagatttttgacgcgtgctccgctcgggtttattgtagagggattgacatacgaataataaaatgcaatatatgataggtaatggtgaaaaaataat 16538184  T
Q  130 acgtggtaatccatagtagac 150  Q
    ||||| |||| ||||||||||    
T  16538183 acgtgataattcatagtagac 16538163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 31 - 125
Target Start/End: Complemental strand, 41511771 - 41511677
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    ||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||    
T  41511771 actagatttttgacccgtgctccgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataattggtaacggtgaaaaaa 41511677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 205 - 333
Target Start/End: Original strand, 43394738 - 43394868
Alignment:
Q  205 tcggtaatcctttcaataattc-ggtatatataaccaagtttacatgaaaattagggtagccgnnnnnnnn-gtataaaatagaaggcatcaaacgtgat 302  Q
    ||||||||||  |||||||||| |||||||||||||||||||||||| |||||||||||| ||         ||||||||||||||||||||||||||||    
T  43394738 tcggtaatccaatcaataattcaggtatatataaccaagtttacatggaaattagggtagacgaaaaaaaaagtataaaatagaaggcatcaaacgtgat 43394837  T
Q  303 cattgatatgctcatagtttctagaacaaac 333  Q
    |||||||||||||||||||||||||||||||    
T  43394838 cattgatatgctcatagtttctagaacaaac 43394868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 205 - 337
Target Start/End: Original strand, 7672916 - 7673048
Alignment:
Q  205 tcggtaatcctttcaataattcgg-tatatataaccaagtttacatgaaaattagggtagccgnnnnnnnngtataaaatagaaggcatcaaacgtgatc 303  Q
    |||||||| || |||||||||||| |||| ||||||||||||||||  |||||||||||||||         |||||| |||||||||||||||||||||    
T  7672916 tcggtaattctatcaataattcgggtatagataaccaagtttacatagaaattagggtagccgaaaaaaac-tataaagtagaaggcatcaaacgtgatc 7673014  T
Q  304 attgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||||||||||||||||||||||||||    
T  7673015 attgatatgctcatagtttctagaacaaacgtgc 7673048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 27 - 150
Target Start/End: Complemental strand, 19123593 - 19123472
Alignment:
Q  27 ctaaactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaat 126  Q
    ||||||||||||||||| ||||||||  ||||  ||||||||||||| |||||||||| |||||||||||| |||||||||| || ||||||||||||      
T  19123593 ctaaactagatttttgacccgtgctctactcggatttattgtaaagggattgacatacaaataataaaatgtaatatataattggtaacggtgaaaaa-- 19123496  T
Q  127 aacacgtggtaatccatagtagac 150  Q
    |||||||| |||||||||||||||    
T  19123495 aacacgtgataatccatagtagac 19123472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 128
Target Start/End: Complemental strand, 19322855 - 19322760
Alignment:
Q  33 tagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataa 128  Q
    ||||||||||| ||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||| |  ||||||||||||||||    
T  19322855 tagatttttgacccgtgctccacttgagtttattgtaaaggaattgacatacggataataaaatgcaatatataattgataacggtgaaaaaataa 19322760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 28 - 150
Target Start/End: Complemental strand, 23141463 - 23141338
Alignment:
Q  28 taaactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataata--ggcaacggtg-aaaaa 124  Q
    ||||||||||||| || ||||||||||| |  |||||||||||||| |||||||||||||||||||||||||||||||||||  |  || |||| |||||    
T  23141463 taaactagattttagacccgtgctccgcacaggtttattgtaaagggattgacatacgaataataaaatgcaatatataatattgataatggtgaaaaaa 23141364  T
Q  125 ataacacgtggtaatccatagtagac 150  Q
    |||||||||| |||||||||||||||    
T  23141363 ataacacgtgataatccatagtagac 23141338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 207 - 332
Target Start/End: Original strand, 26522888 - 26523014
Alignment:
Q  207 ggtaatcctttcaataattcgg-tatatataaccaagtttacatgaaaattagggtagccgnnnnnnnngtataaaatagaaggcatcaaacgtgatcat 305  Q
    ||||||||| ||||||||| || |||||||||||||||||||||| ||||||||||| |||        ||||| |||||||||||||||| ||||||||    
T  26522888 ggtaatcctatcaataatttgggtatatataaccaagtttacatggaaattagggtacccgaaaaaaaagtatataatagaaggcatcaaatgtgatcat 26522987  T
Q  306 tgatatgctcatagtttctagaacaaa 332  Q
    ||||||| |||||||||||||||||||    
T  26522988 tgatatgttcatagtttctagaacaaa 26523014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 205 - 335
Target Start/End: Complemental strand, 35160018 - 35159890
Alignment:
Q  205 tcggtaatcctttcaataattc-ggtatatataaccaagtttacatgaaaattagggtagccgnnnnnnnngtataaaatagaaggcatcaaacgtgatc 303  Q
    ||||||||||| |||||||||| ||||| |||||||||||||||||| |||||||||||||||           ||||||||||||||||||| ||||||    
T  35160018 tcggtaatcctatcaataattccggtatttataaccaagtttacatggaaattagggtagccgaaaaaaag---taaaatagaaggcatcaaatgtgatc 35159922  T
Q  304 attgatatgctcatagtttctagaacaaacgt 335  Q
    ||||||||||||||||| ||||||||||||||    
T  35159921 attgatatgctcatagtctctagaacaaacgt 35159890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 45 - 150
Target Start/End: Original strand, 38004046 - 38004150
Alignment:
Q  45 ccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataacacgtggtaatccata 144  Q
    |||||||||||||| |||||||||||||  ||| ||||| ||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||    
T  38004046 ccgtgctccgctcgggtttattgtaaagagatttacatatgaaaaataaaatgcaatatataataggtaac-gtgaaaaaataacacgtggtaattcata 38004144  T
Q  145 gtagac 150  Q
    ||||||    
T  38004145 gtagac 38004150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 205 - 337
Target Start/End: Complemental strand, 10409840 - 10409709
Alignment:
Q  205 tcggtaatcctttcaataattcgg-tatatataaccaagtttacatgaaaattagggtagccgnnnnnnnngtataaaatagaaggcatcaaacgtgatc 303  Q
    |||||||| || |||||||||||| |||||||||| ||||| ||||| |||||||||||||||        |||||||||||| ||||||||| ||||||    
T  10409840 tcggtaattctatcaataattcgggtatatataactaagttaacatggaaattagggtagccgaaaaaa--gtataaaatagacggcatcaaatgtgatc 10409743  T
Q  304 attgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||||||||||||||||||||| ||||    
T  10409742 attgatatgctcatagtttctagaacaaatgtgc 10409709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 30 - 150
Target Start/End: Complemental strand, 7129293 - 7129171
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtg--aaaaaata 127  Q
    ||||||||||||||  | |||| |||||  |||||||||||||| ||||||||||||||||||||||||||||||||||  | || ||||  ||||||||    
T  7129293 aactagatttttgactcatgcttcgctcaggtttattgtaaagggattgacatacgaataataaaatgcaatatataattagtaatggtgaaaaaaaata 7129194  T
Q  128 acacgtggtaatccatagtagac 150  Q
    ||||||| |||||||||||||||    
T  7129193 acacgtgataatccatagtagac 7129171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 38 - 125
Target Start/End: Complemental strand, 20563386 - 20563299
Alignment:
Q  38 ttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    |||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| || ||| |||||||||    
T  20563386 ttttgacccgtgctccgctcgagtttattgtaaagggattgacatgcgaataataaaatgcaatatataattggtaacagtgaaaaaa 20563299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 26522707 - 26522826
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataaca 130  Q
    |||| ||||||||  |||| ||||||||  ||||||||||||  ||||||||||||||||||||||||||||||||||||| ||| || |||||||||||    
T  26522707 actatatttttgactcgtgttccgctcggatttattgtaaagagattgacatacgaataataaaatgcaatatataataggtaacagtaaaaaaataaca 26522806  T
Q  131 cgtggtaatccatagtagac 150  Q
    |||| ||||  |||||||||    
T  26522807 cgtgataatatatagtagac 26522826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 16305594 - 16305532
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16305594 gtataaaatagaagacatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 16305532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 276 - 337
Target Start/End: Complemental strand, 38110107 - 38110046
Alignment:
Q  276 tataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38110107 tatataatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 38110046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 33 - 125
Target Start/End: Complemental strand, 38110672 - 38110580
Alignment:
Q  33 tagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    ||||||||||| | |||||||| ||| |||||||||||||| |||||||||| ||||||||||||||||||||| | || |||||||||||||    
T  38110672 tagatttttgacctgtgctccgttcgggtttattgtaaagggattgacatacaaataataaaatgcaatatatatttggtaacggtgaaaaaa 38110580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 9487349 - 9487423
Alignment:
Q  51 tccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |  |||||||||||||    
T  9487349 tccgctcgaatttattgtaaaggaattgacatacaaataataaaatgcaatatataattgataacggtgaaaaaa 9487423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 13035059 - 13035121
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  13035059 gtataaaatagaagacatcaaacgtgatcattgatatgctcatagtttctaaaacaaacgtgc 13035121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 13105033 - 13105095
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  13105033 gtataaaatagaaggcatcaaacgtgattattgatatgctcatagtttctaaaacaaacgtgc 13105095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 41511148 - 41511086
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  41511148 gtataaaatagaaagtatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 41511086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 279 - 332
Target Start/End: Original strand, 13104976 - 13105029
Alignment:
Q  279 aaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaa 332  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13104976 aaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaa 13105029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 275 - 334
Target Start/End: Original strand, 14166043 - 14166102
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacg 334  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  14166043 gtataaaatagaagacattaaacgtgatcattgatatgctcatagtttctagaacaaacg 14166102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 23138244 - 23138182
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  23138244 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctgcaacaaatgtgc 23138182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 12441616 - 12441709
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaa 124  Q
    ||||||||||||| |||||||||||||  |||||||||||||| |||| |||||||||||||||||  | |||||||| |  ||||||||||||    
T  12441616 actagatttttgacccgtgctccgctcaggtttattgtaaagggattggcatacgaataataaaatatagtatataattgataacggtgaaaaa 12441709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 279 - 332
Target Start/End: Original strand, 13035002 - 13035055
Alignment:
Q  279 aaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaa 332  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  13035002 aaaatagaaggtatcaaacgtgatcattgatatgctcatagtttctagaacaaa 13035055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 276 - 336
Target Start/End: Original strand, 26523019 - 26523079
Alignment:
Q  276 tataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtg 336  Q
    ||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||    
T  26523019 tataaaatagaagacatcaaaggtgatcattgagatgctcatagtttctagaacaaacgtg 26523079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 16306194 - 16306099
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    |||||||||||||| |   |||||| ||| |||||||||||| | ||||||||||||||||||||||| |||||||||| || |||||||| ||||    
T  16306194 aactagatttttgacctccgctccgttcgggtttattgtaaaaggattgacatacgaataataaaatgtaatatataattggtaacggtgagaaaa 16306099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 276 - 337
Target Start/End: Complemental strand, 7127817 - 7127756
Alignment:
Q  276 tataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||| ||||    
T  7127817 tataaaatagaaggcatcaaacgtgatcatcgatatactcatagtttttagaacaaatgtgc 7127756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 275 - 332
Target Start/End: Original strand, 41092695 - 41092752
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaa 332  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||    
T  41092695 gtataaaatagaagacatcaaacgtgatcattgatatgcttatagtttttagaacaaa 41092752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 19122486 - 19122424
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||||  ||||||||| |||||||||||| |||||||||||||| |||||||||||    
T  19122486 gtataaaatagattgcatcaaacatgatcattgatacgctcatagtttctaaaacaaacgtgc 19122424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 333
Target Start/End: Original strand, 41092756 - 41092814
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaac 333  Q
    ||||||||| |||| |||||||||||||||||||||  |||||||||||||||||||||    
T  41092756 gtataaaatggaagacatcaaacgtgatcattgatagactcatagtttctagaacaaac 41092814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 266
Target Start/End: Original strand, 13034811 - 13034871
Alignment:
Q  207 ggtaatcctttcaataattcgg-tatatataaccaagtttacatgaaaattagggtagccg 266  Q
    ||||||| | |||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  13034811 ggtaatcatctcaataattcgggtatatataaccaagtttacatggaaattagggtagccg 13034871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 149
Target Start/End: Complemental strand, 35160123 - 35160074
Alignment:
Q  100 atatataataggcaacggtgaaaaaataacacgtggtaatccatagtaga 149  Q
    |||||||||||| |||||||||||||||||||||| ||||| ||||||||    
T  35160123 atatataataggtaacggtgaaaaaataacacgtgataatctatagtaga 35160074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 38004524 - 38004588
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatat--gctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||| || |||||||||||||| ||||  ||||||||||| ||||||||||||||    
T  38004524 gtataaaatagaagacagcaaacgtgatcatttatatatgctcatagtttttagaacaaacgtgc 38004588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 207 - 266
Target Start/End: Original strand, 13104784 - 13104844
Alignment:
Q  207 ggtaatcctttcaataattcgg-tatatataaccaagtttacatgaaaattagggtagccg 266  Q
    ||||||| | || ||||||||| |||||||||||||||||||||| |||||||||||||||    
T  13104784 ggtaatcatatcgataattcggatatatataaccaagtttacatggaaattagggtagccg 13104844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 9487555 - 9487592
Alignment:
Q  229 tatatataaccaagtttacatgaaaattagggtagccg 266  Q
    |||||||||||||||||||||| |||||||||||||||    
T  9487555 tatatataaccaagtttacatggaaattagggtagccg 9487592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 263
Target Start/End: Original strand, 41092443 - 41092499
Alignment:
Q  208 gtaatcctttcaataattcgg-tatatataaccaagtttacatgaaaattagggtag 263  Q
    |||||| | |||||||||||| |||||||||||||||||||||  ||||||||||||    
T  41092443 gtaatcatatcaataattcgggtatatataaccaagtttacatagaaattagggtag 41092499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 266
Target Start/End: Complemental strand, 38110449 - 38110410
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtagccg 266  Q
    ||||||||||| |||||||||||| |||||||||||||||    
T  38110449 ggtatatataatcaagtttacatggaaattagggtagccg 38110410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 309
Target Start/End: Complemental strand, 24326353 - 24326319
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgat 309  Q
    |||||||| ||||||||||||||||||||||||||    
T  24326353 gtataaaacagaaggcatcaaacgtgatcattgat 24326319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 309
Target Start/End: Original strand, 24347416 - 24347450
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgat 309  Q
    |||||||| ||||||||||||||||||||||||||    
T  24347416 gtataaaacagaaggcatcaaacgtgatcattgat 24347450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 335
Target Start/End: Original strand, 9487925 - 9487979
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgt 335  Q
    |||||||||||||| ||||||||      |||||||||||||||||||||| |||||||||    
T  9487925 gtataaaatagaagacatcaaac------attgatatgctcatagtttctaaaacaaacgt 9487979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 24270607 - 24270652
Alignment:
Q  33 tagatttttgatccgtgctccgctcgagtttattgtaaaggaattg 78  Q
    |||||| || ||||||| ||||||||||||||||||||||| ||||    
T  24270607 tagattcttcatccgtgttccgctcgagtttattgtaaagggattg 24270652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 24347233 - 24347278
Alignment:
Q  33 tagatttttgatccgtgctccgctcgagtttattgtaaaggaattg 78  Q
    |||||| || ||||||| ||||||||||||||||||||||| ||||    
T  24347233 tagattcttcatccgtgttccgctcgagtttattgtaaagggattg 24347278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 19122124 - 19122088
Alignment:
Q  301 atcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||| |||||||||||||| |||||||||||    
T  19122124 atcattgatacgctcatagtttctaaaacaaacgtgc 19122088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 309
Target Start/End: Original strand, 24270797 - 24270829
Alignment:
Q  277 ataaaatagaaggcatcaaacgtgatcattgat 309  Q
    |||||| ||||||||||||||||||||||||||    
T  24270797 ataaaacagaaggcatcaaacgtgatcattgat 24270829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 264
Target Start/End: Original strand, 38004227 - 38004271
Alignment:
Q  221 taattcgg-tatatataaccaagtttacatgaaaattagggtagc 264  Q
    |||||||| |||||||||||||||||||||| ||||||| |||||    
T  38004227 taattcggatatatataaccaagtttacatggaaattagtgtagc 38004271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 266
Target Start/End: Complemental strand, 41511544 - 41511508
Alignment:
Q  230 atatataaccaagtttacatgaaaattagggtagccg 266  Q
    ||||||||| ||||||||||| |||||||||||||||    
T  41511544 atatataacaaagtttacatggaaattagggtagccg 41511508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 5e-47; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 9829410 - 9829291
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataaca 130  Q
    ||||||||||||| |||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  9829410 actagatttttgacccgtgctccgctcgggtttattgtaaagggattgatatacgaataataaaatgcaatatataataggtaacggtgaaaaaataaca 9829311  T
Q  131 cgtggtaatccatagtagac 150  Q
    |||| |||||||||||||||    
T  9829310 cgtgataatccatagtagac 9829291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 25068682 - 25068563
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataaca 130  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||    
T  25068682 actagatttttgatccgtgctccgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataatagataacagtgaaaaaataaca 25068583  T
Q  131 cgtggtaatccatagtagac 150  Q
     ||| |||||||||||||||    
T  25068582 tgtgataatccatagtagac 25068563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 205 - 337
Target Start/End: Complemental strand, 25068508 - 25068375
Alignment:
Q  205 tcggtaatcctttcaataattcgg-tatatataaccaagtttacatgaaaattagggtagccgnnnnnnnngtataaaatagaaggcatcaaacgtgatc 303  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||||| ||        |||||||||||||||||||||||||||||    
T  25068508 tcggtaatcctgtcaataattcgggtatatataaccaagtttacatggaaattagggtagtcgaaaaaaaagtataaaatagaaggcatcaaacgtgatc 25068409  T
Q  304 attgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||||||||||||||||||||||||||    
T  25068408 attgatatgctcatagtttctagaacaaacgtgc 25068375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 29202884 - 29202765
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataaca 130  Q
    ||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||||| || ||||||||||||||||||    
T  29202884 actagatttttgacccgtgctccgctcgggtttattgtaaagggattgacatacggataataaaatgtaatatataattggtaacggtgaaaaaataaca 29202785  T
Q  131 cgtggtaatccatagtagac 150  Q
    |||| |||||||||||||||    
T  29202784 cgtgataatccatagtagac 29202765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 205 - 337
Target Start/End: Complemental strand, 9829238 - 9829105
Alignment:
Q  205 tcggtaatcctttcaataattcgg-tatatataaccaagtttacatgaaaattagggtagccgnnnnnnnngtataaaatagaaggcatcaaacgtgatc 303  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||  |||||||||||||||        |||||||||||||||||||||||||||||    
T  9829238 tcggtaatcctatcaataattcgggtatatataaccaagtttacatagaaattagggtagccgaaacaaaagtataaaatagaaggcatcaaacgtgatc 9829139  T
Q  304 attgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||||||||||||||||| ||||||||    
T  9829138 attgatatgctcatagtttctagaagaaacgtgc 9829105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 33 - 150
Target Start/End: Original strand, 17905478 - 17905595
Alignment:
Q  33 tagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataacacg 132  Q
    ||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||    
T  17905478 tagatttttgacccgtgctccgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataattggtaacagtgaaaaaataacacg 17905577  T
Q  133 tggtaatccatagtagac 150  Q
    || |||| ||||||||||    
T  17905578 tgataatacatagtagac 17905595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 205 - 337
Target Start/End: Original strand, 4810854 - 4810987
Alignment:
Q  205 tcggtaatcctttcaataattcgg-tatatataaccaagtttacatgaaaattagggtagccgnnnnnnnngtataaaatagaaggcatcaaacgtgatc 303  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||        ||||||||| | ||||||||||| | |||    
T  4810854 tcggtaatcctatcaataattcgggtatatataaccaagtttacatggaaattagggtagccgaaaaaaaagtataaaatcgtaggcatcaaacttaatc 4810953  T
Q  304 attgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||||||||||||||||||||||||||    
T  4810954 attgatatgctcatagtttctagaacaaacgtgc 4810987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 30 - 149
Target Start/End: Complemental strand, 1394451 - 1394331
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaa-aaaataa 128  Q
    ||||| |||||||| ||||||||| |||  |||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||| |||||||    
T  1394451 aactaaatttttgacccgtgctcctctcaggtttattgtaaagggattgacatacgaataataaaatgcaatatataattggtaacggtgaaaaaaataa 1394352  T
Q  129 cacgtggtaatccatagtaga 149  Q
    |||||| ||||||||||||||    
T  1394351 cacgtgataatccatagtaga 1394331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 33 - 125
Target Start/End: Complemental strand, 34294689 - 34294597
Alignment:
Q  33 tagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |  |||||||||||||    
T  34294689 tagatttttgacccgtgctccgctcgggtttattgtaaaggaattgacgtacgaataataaaatgcaatatataattgataacggtgaaaaaa 34294597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 17203663 - 17203568
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    |||||||||||| | ||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||    
T  17203663 aactagattttttacccgtgctccactcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataattggtaacggtgaaaaaa 17203568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 31 - 149
Target Start/End: Original strand, 4810679 - 4810798
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtg-aaaaaataac 129  Q
    ||||||||||||| | |||||   |||| |||||||||||||  ||||||||||||||||||||||||||||||||||||| ||  ||| ||||||||||    
T  4810679 actagatttttgacctgtgctttactcgggtttattgtaaagagattgacatacgaataataaaatgcaatatataataggtaatagtgaaaaaaataac 4810778  T
Q  130 acgtggtaatccatagtaga 149  Q
    ||||| ||||||||||||||    
T  4810779 acgtgataatccatagtaga 4810798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 125
Target Start/End: Original strand, 4099553 - 4099647
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    ||||||||||  | |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||  | |||||||||||||    
T  4099553 actagattttaaacccgtgctccgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataattagtaacggtgaaaaaa 4099647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 29201789 - 29201727
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29201789 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 29201727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 276 - 337
Target Start/End: Original strand, 26832377 - 26832438
Alignment:
Q  276 tataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26832377 tataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 26832438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 275 - 328
Target Start/End: Original strand, 4100175 - 4100228
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaa 328  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4100175 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaa 4100228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 278 - 337
Target Start/End: Original strand, 17906665 - 17906724
Alignment:
Q  278 taaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  17906665 taaaatagaaggcatcaaacttgatcattgatatgctcatggtttctagaacaaacgtgc 17906724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 276 - 337
Target Start/End: Complemental strand, 1393793 - 1393732
Alignment:
Q  276 tataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  1393793 tataagattgaaggcatcaaacgtgatcattgatatgctcatagtttctaaaacaaacgtgc 1393732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 275 - 322
Target Start/End: Complemental strand, 23622472 - 23622425
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagttt 322  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  23622472 gtataaaatagaaggcatcaaacgtggtcattgatatgctcatagttt 23622425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 333
Target Start/End: Complemental strand, 809075 - 809017
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaac 333  Q
    ||||||||||||||||||||||| | |||||||||||||| ||| ||||||||||||||    
T  809075 gtataaaatagaaggcatcaaacattatcattgatatgctgataatttctagaacaaac 809017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 6036584 - 6036634
Alignment:
Q  29 aaactagatttttgatccgtgctccgctcgagtttattgtaaaggaattga 79  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  6036584 aaactagatttttgacccgtgctccgctcgagtttattgtaaagggattga 6036634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 108
Target Start/End: Complemental strand, 23623043 - 23622964
Alignment:
Q  29 aaactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataat 108  Q
    ||||||||||||||| |  ||||||||||||||||||| ||||   |||||||||| |||||||||||| |||| |||||    
T  23623043 aaactagatttttgacctttgctccgctcgagtttattataaaatgattgacataccaataataaaatgtaatacataat 23622964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 266
Target Start/End: Complemental strand, 29202040 - 29202001
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtagccg 266  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  29202040 ggtatatataaccaagtttacatgaaaattagggtagccg 29202001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 61 - 125
Target Start/End: Original strand, 26831809 - 26831873
Alignment:
Q  61 tttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    |||||||||||  |||| |||||||||||||||||| ||||||||||| |  |||||||||||||    
T  26831809 tttattgtaaaaaaattaacatacgaataataaaatacaatatataattgataacggtgaaaaaa 26831873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 266
Target Start/End: Complemental strand, 17203437 - 17203398
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtagccg 266  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  17203437 ggtatatataaccaagtttacatggaaattagggtagccg 17203398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 17203069 - 17203033
Alignment:
Q  301 atcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||||||||||||||||||||| ||||    
T  17203069 atcattgatatgctcatagtttctagaacaaatgtgc 17203033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 32207911 - 32207983
Alignment:
Q  36 atttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataat 108  Q
    |||||| | ||||||| |||||||||||||||  ||   |||||||||  |||||||||||||||||||||||    
T  32207911 atttttaaaccgtgcttcgctcgagtttattgcgaaatgattgacatagaaataataaaatgcaatatataat 32207983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 306 - 337
Target Start/End: Complemental strand, 808686 - 808655
Alignment:
Q  306 tgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||||||||||||||||||||||||    
T  808686 tgatatgctcatagtttctagaacaaacgtgc 808655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 266
Target Start/End: Original strand, 4099781 - 4099820
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtagccg 266  Q
    |||||||||||||||||||||||| |||||||| ||||||    
T  4099781 ggtatatataaccaagtttacatggaaattaggttagccg 4099820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 266
Target Start/End: Original strand, 17906290 - 17906329
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtagccg 266  Q
    |||||||||||||||||||||||| ||||| |||||||||    
T  17906290 ggtatatataaccaagtttacatggaaattcgggtagccg 17906329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 81
Target Start/End: Complemental strand, 23902803 - 23902752
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgaca 81  Q
    |||||| ||||||| ||||||||||| | ||||||||||||||| |||||||    
T  23902803 aactaggtttttgacccgtgctccgcacaagtttattgtaaagggattgaca 23902752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 262
Target Start/End: Complemental strand, 34294467 - 34294432
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggta 262  Q
    ||||||||||||||||||| ||||||||||||||||    
T  34294467 ggtatatataaccaagtttgcatgaaaattagggta 34294432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 336
Target Start/End: Complemental strand, 17201808 - 17201779
Alignment:
Q  307 gatatgctcatagtttctagaacaaacgtg 336  Q
    ||||||||||||||||||||||||||||||    
T  17201808 gatatgctcatagtttctagaacaaacgtg 17201779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 336
Target Start/End: Complemental strand, 17202842 - 17202813
Alignment:
Q  307 gatatgctcatagtttctagaacaaacgtg 336  Q
    ||||||||||||||||||||||||||||||    
T  17202842 gatatgctcatagtttctagaacaaacgtg 17202813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 335
Target Start/End: Complemental strand, 23622420 - 23622387
Alignment:
Q  302 tcattgatatgctcatagtttctagaacaaacgt 335  Q
    ||||||||||||||||||||||| ||||||||||    
T  23622420 tcattgatatgctcatagtttctggaacaaacgt 23622387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 32208125 - 32208162
Alignment:
Q  229 tatatataaccaagtttacatgaaaattagggtagccg 266  Q
    |||||||||||||||||||||| | |||||||||||||    
T  32208125 tatatataaccaagtttacatggagattagggtagccg 32208162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 94; Significance: 7e-46; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 205 - 337
Target Start/End: Original strand, 12896214 - 12896347
Alignment:
Q  205 tcggtaatcctttcaataattcgg-tatatataaccaagtttacatgaaaattagggtagccgnnnnnnnngtataaaatagaaggcatcaaacgtgatc 303  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  12896214 tcggtaatcctatcaataattcgggtatatataaccaagtttacatgaaaattagggtagccgaaaaaaaagtataaaatagaaggcatcaaacgtgatc 12896313  T
Q  304 attgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||||||||||||||| ||||||||||    
T  12896314 attgatatgctcatagtttctaggacaaacgtgc 12896347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 28 - 149
Target Start/End: Complemental strand, 12898728 - 12898607
Alignment:
Q  28 taaactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaata 127  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||| |||||||| ||||||||||||| |||||||||||||| |||||||||||||||    
T  12898728 taaactagatttttgacccgtgctccgctcaagtttattgtaaagggattgacatgcgaataataaaatacaatatataataggtaacggtgaaaaaata 12898629  T
Q  128 acacgtggtaatccatagtaga 149  Q
    ||||||| ||||||||| ||||    
T  12898628 acacgtgataatccataataga 12898607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 205 - 335
Target Start/End: Complemental strand, 6348389 - 6348258
Alignment:
Q  205 tcggtaatcctttcaataattcgg-tatatataaccaagtttacatgaaaattagggtagccgnnnnnnnngtataaaatagaaggcatcaaacgtgatc 303  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||        |||||||||||||| ||||||||||||||    
T  6348389 tcggtaatcctatcaataattcgggtatatataaccaagtttacatgaaaattagggtagccgaaaaaaaagtataaaatagaagacatcaaacgtgatc 6348290  T
Q  304 attgatatgctcatagtttctagaacaaacgt 335  Q
    |||||||||||||||||||||| |||||||||    
T  6348289 attgatatgctcatagtttctaaaacaaacgt 6348258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 28 - 150
Target Start/End: Original strand, 12896037 - 12896159
Alignment:
Q  28 taaactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaata 127  Q
    |||| ||||||||||| || ||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  12896037 taaaatagatttttgacccatgctccgctcgggtttatcgtaaagggattgacatacgaataataaaatgcaatatataataggtaacggtgaaaaaata 12896136  T
Q  128 acacgtggtaatccatagtagac 150  Q
    | ||||| |||||||||||||||    
T  12896137 atacgtgataatccatagtagac 12896159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 44543359 - 44543477
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataac 129  Q
    |||||||||||||| |||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||     
T  44543359 aactagatttttgacccgtgctccgctcgggtttattgtaaatggattgacatacgaataataaaatgcaatatataataggtaacggtgaaaaaataat 44543458  T
Q  130 acgtggtaatccatagtag 148  Q
    ||||| ||||| |||||||    
T  44543459 acgtgataatctatagtag 44543477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 6348563 - 6348444
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataaca 130  Q
    |||| |||||||| ||| ||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||| || |||||||||||||||    
T  6348563 actaaatttttgacccgcgctccgctcgagtttattgtaaagggattgatatacgaaaaataaaatgcaatatataataggtaaaggtgaaaaaataaca 6348464  T
Q  131 cgtggtaatccatagtagac 150  Q
    |||| |||||||||||||||    
T  6348463 cgtgataatccatagtagac 6348444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 29550820 - 29550703
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataaca 130  Q
    ||||||||||||| | ||||||||||||||||||||||||| | |||||||||||||||||||||| || ||||||||||| ||||||||||||||||||    
T  29550820 actagatttttgacctgtgctccgctcgagtttattgtaaatggattgacatacgaataataaaatacagtatataataggtaacggtgaaaaaataaca 29550721  T
Q  131 cgtggtaatccatagtag 148  Q
    |||| |||| ||||||||    
T  29550720 cgtgataattcatagtag 29550703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 205 - 337
Target Start/End: Complemental strand, 627899 - 627766
Alignment:
Q  205 tcggtaatcctttcaataattcgg-tatatataaccaagtttacatgaaaattagggtagccgnnnnnnnngtataaaatagaaggcatcaaacgtgatc 303  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||| | |||||||||||||        |||||||||| ||||||||||||||||||    
T  627899 tcggtaatcctatcaataattcgggtatatataaccaagtttacatggagattagggtagccgaaaaaaaagtataaaatataaggcatcaaacgtgatc 627800  T
Q  304 attgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||||||||||| ||||| ||||||||    
T  627799 attgatatgctcatagtttatagaataaacgtgc 627766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 833279 - 833374
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    |||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||    
T  833279 aactagatttttgacccgtgctccgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataattggtaacggtgaaaaaa 833374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 28 - 125
Target Start/End: Original strand, 2131969 - 2132066
Alignment:
Q  28 taaactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    |||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| || ||| |||||||||    
T  2131969 taaactagatttttgacccgtgctccgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataattggtaaccgtgaaaaaa 2132066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 33 - 125
Target Start/End: Complemental strand, 11658327 - 11658235
Alignment:
Q  33 tagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    ||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||    
T  11658327 tagatttttgacccgtgctccgctcgggtttattgtaaaggcattgacatacgaataataaaatgcaatatataattggtaacggtgaaaaaa 11658235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 31 - 125
Target Start/End: Original strand, 37130759 - 37130853
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    |||||||||||||  ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||    
T  37130759 actagatttttgactcgtgctccgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataattggtaacggtgaaaaaa 37130853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 44257139 - 44257020
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataaca 130  Q
    |||| |||||| ||||||||||||||| | ||||||||||||  ||||| ||||||||||||||||||||||||||||||  ||  ||||||||||||||    
T  44257139 actatatttttaatccgtgctccgctcaaatttattgtaaagagattgatatacgaataataaaatgcaatatataatagataatagtgaaaaaataaca 44257040  T
Q  131 cgtggtaatccatagtagac 150  Q
    |||| |||||||| ||||||    
T  44257039 cgtgataatccattgtagac 44257020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 31 - 125
Target Start/End: Complemental strand, 11736938 - 11736844
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    ||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||  || ||| |||||||||    
T  11736938 actagatttttgatccgtgctccgctcggatttattgtaaagggattgacatacgaataataaaatgcaatatataactggtaacagtgaaaaaa 11736844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 30 - 128
Target Start/End: Complemental strand, 20709686 - 20709588
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataa 128  Q
    |||||||||||||| | ||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||    
T  20709686 aactagatttttgacctgtgatccgcttgagtttatcgtaaaggaattgacatacgaataataaaatgcaatatataattggtaacagtgaaaaaataa 20709588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 14335826 - 14335921
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    ||||||||||||||  ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |  ||| |||||||||    
T  14335826 aactagatttttgactcgtgctccgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataattgataacagtgaaaaaa 14335921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 125
Target Start/End: Original strand, 10128782 - 10128876
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    ||||||||||||| | |||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||| || | |||||||||||    
T  10128782 actagatttttgacctgtgctccgctcgggtttattgtaaagggattgacatacgaataataaaatgaaatatataattggtagcggtgaaaaaa 10128876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 125
Target Start/End: Complemental strand, 41327246 - 41327152
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    ||||||||||| | ||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||| |  |||||||||||||    
T  41327246 actagatttttaacccgtgctccgctcggatttattgtaaagggattgacatacgaataataaaatgcaatatataattgataacggtgaaaaaa 41327152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 33 - 125
Target Start/End: Original strand, 8430566 - 8430657
Alignment:
Q  33 tagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    |||||||||||  ||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||    
T  8430566 tagatttttgactcgtgctccgcttgggtttattgtaaagga-ttgacatacgaataataaaatgcaatatataattggtaacggtgaaaaaa 8430657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 30 - 108
Target Start/End: Original strand, 20639778 - 20639856
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataat 108  Q
    |||||||||||| | |||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  20639778 aactagattttttacccgtgctccgctcgggtttattgtaaagggattgacaaacgaataataaaatgcaatatataat 20639856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 31 - 125
Target Start/End: Original strand, 28611522 - 28611616
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    ||||||||||||||| ||| |||||| | |||||||||||||| |||||||||| ||||||||||||||||||||||| || ||| |||||||||    
T  28611522 actagatttttgatcagtgttccgcttgggtttattgtaaagggattgacatacaaataataaaatgcaatatataattggtaacagtgaaaaaa 28611616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 41995613 - 41995675
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  41995613 gtataaaatagaaggcatcaaacatgatcattgatatgctcatagtttctagaacaaacgtgc 41995675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 125
Target Start/End: Complemental strand, 17370761 - 17370664
Alignment:
Q  28 taaactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    |||||||||||||||| |||| |||||||||  ||||||||||||  |||||||||||||||||||||| ||||||||||| || ||| |||||||||    
T  17370761 taaactagatttttgacccgtactccgctcggatttattgtaaagagattgacatacgaataataaaatacaatatataattggtaacagtgaaaaaa 17370664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 12898263 - 12898201
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  12898263 gtataaaatagaagacatcaaacttgatcattgatatgctcatagtttctagaacaaacgtgc 12898201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 28611669 - 28611731
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  28611669 gtataaaatagaaggaatcaaacgtgatcattgatatgttcatagtttctagaacaaacgtgc 28611731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 28 - 148
Target Start/End: Original strand, 27351504 - 27351625
Alignment:
Q  28 taaactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtga-aaaaat 126  Q
    ||||||||||| |||| ||||||  ||| || ||||||||  |||| |||||||||||||||||||||||||||||||||| || |||||||| |||||     
T  27351504 taaactagattgttgacccgtgcgtcgcacgggtttattgataagggattgacatacgaataataaaatgcaatatataattggtaacggtgacaaaaag 27351603  T
Q  127 aacacgtggtaatccatagtag 148  Q
    || | ||| |||||||||||||    
T  27351604 aataagtgataatccatagtag 27351625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 275 - 336
Target Start/End: Original strand, 37131347 - 37131408
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtg 336  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  37131347 gtataaaatagaaggtatcaaacatgatcattgatatgctcatagtttctagaacaaacgtg 37131408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 44256720 - 44256658
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  44256720 gtataaaataaaatgcatcaaacgtgatcattgatatgttcatagtttctagaacaaacgtgc 44256658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 628056 - 627954
Alignment:
Q  46 cgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataacacgtggtaatccatag 145  Q
    ||||||||| |||  ||||||||||||  ||||| ||||||||||||||||| ||||||||||  | |||||| ||||||||||||||| ||||||||||    
T  628056 cgtgctccgttcggatttattgtaaagagattgagatacgaataataaaatgtaatatataat--gtaacggtaaaaaaataacacgtgataatccatag 627959  T
Q  146 tagac 150  Q
     ||||    
T  627958 cagac 627954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 275 - 332
Target Start/End: Complemental strand, 12898324 - 12898267
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaa 332  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  12898324 gtataaaatagaaggtatcaaacatgatcattgatatgctcatagtttctagaacaaa 12898267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 128
Target Start/End: Complemental strand, 19640608 - 19640511
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataa 128  Q
    |||||||||||||||  | ||||||||| |||||| ||||||| ||||| |||||||| |||||||||||||||| ||||  |||||| |||||||||    
T  19640608 actagatttttgatctatactccgctcgggtttatagtaaagggattgatatacgaatgataaaatgcaatatatgatagataacggttaaaaaataa 19640511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 128
Target Start/End: Complemental strand, 19839201 - 19839104
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataa 128  Q
    |||||||||||||||  | ||||||||| |||||| ||||||| ||||| |||||||| |||||||||||||||| ||||  |||||| |||||||||    
T  19839201 actagatttttgatctatactccgctcgggtttatagtaaagggattgatatacgaatgataaaatgcaatatatgatagataacggttaaaaaataa 19839104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 276 - 337
Target Start/End: Complemental strand, 41326611 - 41326550
Alignment:
Q  276 tataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||    
T  41326611 tataaaatagaaggcatcaaaggtgatcattgatatgctcataatttctagaacaaatgtgc 41326550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 275 - 332
Target Start/End: Complemental strand, 44256781 - 44256724
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaa 332  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||    
T  44256781 gtataaaatagaaggcattaaacgtgatcattgatatgctcatggtttctaaaacaaa 44256724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 29550385 - 29550323
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||| |||||||| |||||||||||||| ||||||||| ||||||||| ||||    
T  29550385 gtataaaatagaagacatcaaacatgatcattgatatgttcatagtttttagaacaaatgtgc 29550323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 29550646 - 29550584
Alignment:
Q  205 tcggtaatcctttcaataattcgg-tatatataaccaagtttacatgaaaattagggtagccg 266  Q
    ||||||||| | |||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  29550646 tcggtaatcatatcaataattcgggtatatataaccaagtttacatggaaattagggtagccg 29550584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 60 - 150
Target Start/End: Complemental strand, 11131800 - 11131708
Alignment:
Q  60 gtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaa--aaaataacacgtggtaatccatagtagac 150  Q
    ||||||||| |||  ||||||| |||||||||||||||||||||||||| |  |||||||||  |||| |||| ||| |||||||||||||||    
T  11131800 gtttattgttaagagattgacaaacgaataataaaatgcaatatataattgataacggtgaaaaaaaagaacaggtgataatccatagtagac 11131708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 28 - 125
Target Start/End: Original strand, 30556834 - 30556931
Alignment:
Q  28 taaactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    ||||||||||| |||||||||||  | | || ||||||||| || | ||||| |||  ||||||||||||||||||||||| || |||||||||||||    
T  30556834 taaactagattgttgatccgtgcgtcacacgtgtttattgttaaaggattgaaatataaataataaaatgcaatatataattggtaacggtgaaaaaa 30556931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 276 - 337
Target Start/End: Original strand, 10129365 - 10129422
Alignment:
Q  276 tataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||||||||    ||||||||||||||||||||||||||| ||||||||||||||    
T  10129365 tataaaatagaaggca----acgtgatcattgatatgctcatagtttttagaacaaacgtgc 10129422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 266
Target Start/End: Original strand, 14336050 - 14336089
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtagccg 266  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  14336050 ggtatatataaccaagtttacatgaaaattagggtagccg 14336089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 279 - 337
Target Start/End: Complemental strand, 11657689 - 11657632
Alignment:
Q  279 aaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||||||||||| ||||||| |||||||| ||||||||||||||||| ||||    
T  11657689 aaaatagaaggcatcaaacatgatcat-gatatgcttatagtttctagaacaaatgtgc 11657632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 12898539 - 12898489
Alignment:
Q  217 tcaataattcgg-tatatataaccaagtttacatgaaaattagggtagccg 266  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  12898539 tcaataattcgggtatatataaccaagtttacatggaaattagggtagccg 12898489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 266
Target Start/End: Complemental strand, 11658100 - 11658061
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtagccg 266  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  11658100 ggtatatataaccaagtttacatggaaattagggtagccg 11658061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 266
Target Start/End: Complemental strand, 11736650 - 11736611
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtagccg 266  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  11736650 ggtatatataaccaagtttacatggaaattagggtagccg 11736611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 337
Target Start/End: Original strand, 14336585 - 14336642
Alignment:
Q  276 tataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||  |||||||||||||||    || |||||||||||||||||||||||||    
T  14336585 tataaaatagaagatatcaaacgtgatcat----atcctcatagtttctagaacaaacgtgc 14336642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 263
Target Start/End: Original strand, 10129011 - 10129046
Alignment:
Q  228 gtatatataaccaagtttacatgaaaattagggtag 263  Q
    ||||||||||||||||||||||| ||||||||||||    
T  10129011 gtatatataaccaagtttacatggaaattagggtag 10129046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 266
Target Start/End: Complemental strand, 17370533 - 17370494
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtagccg 266  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  17370533 ggtatatataaccaagtttacatggaaattagagtagccg 17370494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 266
Target Start/End: Original strand, 20641304 - 20641343
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtagccg 266  Q
    |||||| ||||||||||||||||| |||||||||||||||    
T  20641304 ggtataaataaccaagtttacatggaaattagggtagccg 20641343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 262
Target Start/End: Complemental strand, 20709457 - 20709422
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggta 262  Q
    |||||||||||||||||||||||| |||||||||||    
T  20709457 ggtatatataaccaagtttacatggaaattagggta 20709422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 337
Target Start/End: Original strand, 28611916 - 28611946
Alignment:
Q  307 gatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||||||||||||||||||||    
T  28611916 gatatgctcatagtttctagaacaaacgtgc 28611946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 337
Target Start/End: Original strand, 28612341 - 28612371
Alignment:
Q  307 gatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||||||||||||||||||||    
T  28612341 gatatgctcatagtttctagaacaaacgtgc 28612371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 337
Target Start/End: Original strand, 28612553 - 28612583
Alignment:
Q  307 gatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||||||||||||||||||||    
T  28612553 gatatgctcatagtttctagaacaaacgtgc 28612583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 337
Target Start/End: Original strand, 28612763 - 28612793
Alignment:
Q  307 gatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||||||||||||||||||||    
T  28612763 gatatgctcatagtttctagaacaaacgtgc 28612793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 265
Target Start/End: Original strand, 41995247 - 41995285
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtagcc 265  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  41995247 ggtatatataaccaagtttacatagaaattagggtagcc 41995285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 125
Target Start/End: Original strand, 41995020 - 41995113
Alignment:
Q  33 tagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatac-gaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    ||||||||||| ||||  ||||||||  |||||| |||||| ||||| | || ||||||| ||||||| |||||||| || |||| ||||||||    
T  41995020 tagatttttgacccgtattccgctcggatttattataaagggattgatagacggaataatgaaatgcactatataattggtaacgatgaaaaaa 41995113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 337
Target Start/End: Complemental strand, 11736125 - 11736097
Alignment:
Q  309 tatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||||||||||||||||||    
T  11736125 tatgctcatagtttctagaacaaacgtgc 11736097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 94; Significance: 7e-46; HSPs: 72)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 33 - 150
Target Start/End: Complemental strand, 27296810 - 27296693
Alignment:
Q  33 tagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataacacg 132  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |    
T  27296810 tagatttttgacccgtgctccgctcgagtttattgtaaagggattgacatacgaataataaaatgcaatatataataggtaacggtgaaaaaataacatg 27296711  T
Q  133 tggtaatccatagtagac 150  Q
    || |||| ||||||||||    
T  27296710 tgataattcatagtagac 27296693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 30 - 150
Target Start/End: Original strand, 28949504 - 28949624
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataac 129  Q
    |||||||||||||| |||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||     
T  28949504 aactagatttttgacccgtgctccgctcgggtttattgtaaaaggattgacatacgaataataaaatgcaatatataataggtaacggtgaaaaaataat 28949603  T
Q  130 acgtggtaatccatagtagac 150  Q
    ||||| |||||||||||||||    
T  28949604 acgtgataatccatagtagac 28949624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 30 - 147
Target Start/End: Original strand, 48411580 - 48411697
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataac 129  Q
    |||||||||||| | |||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||| |||||||||||    
T  48411580 aactagatttttaacccgtgccccgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataatagataacggcgaaaaaataac 48411679  T
Q  130 acgtggtaatccatagta 147  Q
    ||||| ||||||||||||    
T  48411680 acgtgataatccatagta 48411697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 209 - 337
Target Start/End: Complemental strand, 24595525 - 24595397
Alignment:
Q  209 taatcctttcaataattcgg-tatatataaccaagtttacatgaaaattagggtagccgnnnnnnnngtataaaatagaaggcatcaaacgtgatcattg 307  Q
    ||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||         |||||||||||||||||||||||||||||||||    
T  24595525 taatcctatcaataattcgggtatatataaccaagtttacatggaaattagggtagcc-aaaaaaaggtataaaatagaaggcatcaaacgtgatcattg 24595427  T
Q  308 atatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||||||||||||||||| ||||    
T  24595426 atatgctcatagtttctagaacaaatgtgc 24595397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 33 - 149
Target Start/End: Original strand, 1155675 - 1155791
Alignment:
Q  33 tagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataacacg 132  Q
    |||||||||||  | ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  1155675 tagatttttgactcatgctccgctcgagtttattataaagggattgacatacgaataataaaatgcaatatataataggtaatggtgaaaaaataacacg 1155774  T
Q  133 tggtaatccatagtaga 149  Q
    || |||| ||| |||||    
T  1155775 tgataattcattgtaga 1155791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 205 - 337
Target Start/End: Original strand, 1155847 - 1155982
Alignment:
Q  205 tcggtaatcctttcaataattcgg-tatatataaccaagtttacatgaaaattagggtagccgnnnnnnnng--tataaaatagaaggcatcaaacgtga 301  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||        |  |||||||||||||||||||||| |||    
T  1155847 tcggtaatcctatcaataattcgggtatatataaccaagtttacatggaaattagggtagccgaaaaaaaagagtataaaatagaaggcatcaaacatga 1155946  T
Q  302 tcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    | ||||||||||||||||||||||||||||||||||    
T  1155947 ttattgatatgctcatagtttctagaacaaacgtgc 1155982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 30 - 121
Target Start/End: Complemental strand, 12116164 - 12116073
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaa 121  Q
    |||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  12116164 aactagatttttgacccgtgctccgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataataggtaacggtgaa 12116073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 31 - 125
Target Start/End: Original strand, 16165188 - 16165282
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| || |||||||||||||    
T  16165188 actagatttttgacccgtgctccgctcgagtttattgtaaagggattgacatacgaataatgaaatgcaatatataattggtaacggtgaaaaaa 16165282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 21618899 - 21618804
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    |||||||||||||| |||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||| || |||||||||||||    
T  21618899 aactagatttttgacccgtgctccgctcgggtttattgtaaagggattgacatacaaataataaaatgcaatatataattggtaacggtgaaaaaa 21618804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 52 - 150
Target Start/End: Original strand, 44099244 - 44099341
Alignment:
Q  52 ccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataacacgtggtaatccatagtagac 150  Q
    ||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||    
T  44099244 ccgctcgggcttattgtaaagggattgacatacgaataataaaatgcaatatataataggtaacggtg-aaaaataacacgtgataatccatagtagac 44099341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 32 - 149
Target Start/End: Complemental strand, 319096 - 318981
Alignment:
Q  32 ctagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataacac 131  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||  || |||||||||||    
T  319096 ctagatttttga-ccgtgctccgctcaagtttattgtaaaggaattgacatacgaataataaaatataatatataataggtaacaatg-aaaaataacac 318999  T
Q  132 gtggtaatccatagtaga 149  Q
    ||| |||| |||||||||    
T  318998 gtgataattcatagtaga 318981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 31 - 144
Target Start/End: Complemental strand, 24595707 - 24595594
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataaca 130  Q
    |||||| ||||||  ||||||||| ||| |||||||||||||  ||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||    
T  24595707 actagaattttgactcgtgctccgatcgggtttattgtaaagagattgacatatgcataataaaatgcaatatataataggtaacggtgaaaaaataaca 24595608  T
Q  131 cgtggtaatccata 144  Q
    |||| |||||||||    
T  24595607 cgtgataatccata 24595594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 45 - 150
Target Start/End: Complemental strand, 51114383 - 51114278
Alignment:
Q  45 ccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataacacgtggtaatccata 144  Q
    ||||||||||||||  ||||||||||||  ||||| ||||||||||||||||||||||||| ||||| ||| |||||||||||||||||| |||||||||    
T  51114383 ccgtgctccgctcggatttattgtaaagagattgatatacgaataataaaatgcaatatatgataggtaacagtgaaaaaataacacgtgataatccata 51114284  T
Q  145 gtagac 150  Q
    ||||||    
T  51114283 gtagac 51114278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 128
Target Start/End: Complemental strand, 18913204 - 18913109
Alignment:
Q  33 tagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataa 128  Q
    ||||||||||||||||||||||||| | ||||||||||||| ||||| |||||||||||||||||||||||||||| ||  |||||||||||||||    
T  18913204 tagatttttgatccgtgctccgctcaaatttattgtaaagggattgatatacgaataataaaatgcaatatataattggtcacggtgaaaaaataa 18913109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 205 - 337
Target Start/End: Original strand, 28949679 - 28949813
Alignment:
Q  205 tcggtaatcctttcaataattcgg-tatatataaccaagtttacatgaaaattagggtagccgnnnnnnnn-gtataaaatagaaggcatcaaacgtgat 302  Q
    |||| |||||| |||||||||||| |||||||||||||||||||||| |||||| ||||||||         |||||||||||||| |||||||| ||||    
T  28949679 tcggcaatcctatcaataattcgggtatatataaccaagtttacatggaaattaaggtagccgaaaaaaaaagtataaaatagaagacatcaaacatgat 28949778  T
Q  303 cattgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||||||||||||||| |||||||||||    
T  28949779 cattgatatgctcatagtttctataacaaacgtgc 28949813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 205 - 333
Target Start/End: Original strand, 48411755 - 48411885
Alignment:
Q  205 tcggtaatcctttcaataattcgg-tatatataaccaagtttacatgaaaattagggtagccgnnnnnnnng-tataaaatagaaggcatcaaacgtgat 302  Q
    |||| |||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||          |||||||||||||||||||||||| ||    
T  48411755 tcggaaatcctatcaataattcgggtatatataaccaagtttacatggaaattagggtagccgaaaaaaaaaatataaaatagaaggcatcaaacgtaat 48411854  T
Q  303 cattgatatgctcatagtttctagaacaaac 333  Q
    |||||||||||||| ||||||||||||||||    
T  48411855 cattgatatgctcacagtttctagaacaaac 48411885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 30 - 150
Target Start/End: Complemental strand, 5429746 - 5429625
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaa-aaaataa 128  Q
    |||||||||||||| ||||||||||||||  ||||| ||||||| |||||||| |||||||||||||| |||||||||| |  ||||||||| |||||||    
T  5429746 aactagatttttgacccgtgctccgctcggatttatggtaaagggattgacatgcgaataataaaatgtaatatataattgataacggtgaaaaaaataa 5429647  T
Q  129 cacgtggtaatccatagtagac 150  Q
    |||||| ||||| |||||||||    
T  5429646 cacgtgataatctatagtagac 5429625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 33 - 125
Target Start/End: Complemental strand, 44264610 - 44264518
Alignment:
Q  33 tagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    ||||||||||| |||||||||||| | ||||||||||||||| || |||||||||||||||||||||||||||||| || |||||||||||||    
T  44264610 tagatttttgacccgtgctccgctagggtttattgtaaaggatttaacatacgaataataaaatgcaatatataattggtaacggtgaaaaaa 44264518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 1648355 - 1648260
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    |||||||||||||| | |||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||| || || ||||||||||    
T  1648355 aactagatttttgacctgtgctccgctcgggtttattgtaaagggattggcatacgaataataaaatgcaatatataattggtaatggtgaaaaaa 1648260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 4099889 - 4099984
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    |||||||||||| | | |||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||| || |||||||||||||    
T  4099889 aactagattttttaccagtgctccgctcgggtttattgtaaagggattgacatacgaataataaaattcaatatataattggtaacggtgaaaaaa 4099984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 31 - 106
Target Start/End: Original strand, 52407478 - 52407553
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatata 106  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  52407478 actagatttttgacccgtgctccgctcgagtttattgtaaagggattgccatacgaataataaaatgcaatatata 52407553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 42491591 - 42491711
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagt--ttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataa 128  Q
    ||||||||||||| |||||||||||||| ||  ||||| |||| || |||||||||||||||||||||||||||||||||||| |||  |||||||||||    
T  42491591 actagatttttgacccgtgctccgctcgtgtgtttattttaaaaga-ttgacatacgaataataaaatgcaatatataataggtaacaatgaaaaaataa 42491689  T
Q  129 cacgtggtaatccatagtagac 150  Q
      |||| |||||||||||||||    
T  42491690 atcgtgataatccatagtagac 42491711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 31 - 128
Target Start/End: Original strand, 44451664 - 44451761
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataa 128  Q
    ||||||||||||| |||||||||||| | ||||||| |||||| ||||| |||||||||||||||||||||||||||| || ||| ||||||||||||    
T  44451664 actagatttttgacccgtgctccgctagggtttattataaagggattgatatacgaataataaaatgcaatatataattggtaacagtgaaaaaataa 44451761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 28 - 125
Target Start/End: Complemental strand, 47791507 - 47791410
Alignment:
Q  28 taaactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    |||||||||||||||| |||| |||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||| || |||  ||||||||    
T  47791507 taaactagatttttgacccgtactccgctcggatttattgtaaaggaattgacatatgaataataaaatgcaatatataattggtaacaatgaaaaaa 47791410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 277 - 337
Target Start/End: Complemental strand, 38684263 - 38684203
Alignment:
Q  277 ataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38684263 ataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 38684203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 33 - 125
Target Start/End: Complemental strand, 39282488 - 39282396
Alignment:
Q  33 tagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    ||||||||||| |||||||||||||   ||||||||||||| |||||||||||||||||||||||||||||||||| || ||| |||||||||    
T  39282488 tagatttttgacccgtgctccgctcagatttattgtaaagggattgacatacgaataataaaatgcaatatataattggtaacagtgaaaaaa 39282396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 277 - 337
Target Start/End: Original strand, 42492020 - 42492080
Alignment:
Q  277 ataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42492020 ataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 42492080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 205 - 332
Target Start/End: Original strand, 44099396 - 44099527
Alignment:
Q  205 tcggtaatcctttcaataattcgg-tatatataaccaagtttacatgaaaattagggtag-ccgnnnnnnnng--tataaaatagaaggcatcaaacgtg 300  Q
    ||||||||||| |||||||||||| ||||||||||||||||| |||| |||||||||||| |||           |||||||||||||||||||||||||    
T  44099396 tcggtaatcctatcaataattcgggtatatataaccaagtttgcatggaaattagggtagaccgaaaaaaaaaaatataaaatagaaggcatcaaacgtg 44099495  T
Q  301 atcattgatatgctcatagtttctagaacaaa 332  Q
    ||||||| ||||||||||||||||||||||||    
T  44099496 atcattgttatgctcatagtttctagaacaaa 44099527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 25931331 - 25931426
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    |||||||||||||| |||| |||||||   |||||||||||||  |||||||||||||||||||||||||||||||||| || |||||||||||||    
T  25931331 aactagatttttgacccgtactccgcttaggtttattgtaaagtgattgacatacgaataataaaatgcaatatataattggtaacggtgaaaaaa 25931426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 318801 - 318739
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  318801 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttatagaacaaacgtgc 318739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 38685815 - 38685717
Alignment:
Q  53 cgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaa-aaaataacacgtggtaatccatagtagac 150  Q
    |||||||||||||| |||||| ||| ||||| |||||||||||||||||||||||| || ||||||||| ||||||||||||| ||||| |||||||||    
T  38685815 cgctcgagtttattttaaagggattaacataagaataataaaatgcaatatataattggtaacggtgaaaaaaataacacgtgataatctatagtagac 38685717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 51272348 - 51272410
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  51272348 gtataaaatagaaggcatcaaacatgatcattgatatgctcatagtttctagaacaaacgtgc 51272410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 33 - 125
Target Start/End: Original strand, 3226481 - 3226573
Alignment:
Q  33 tagatttttgatccgtgctccgct-cgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    ||||||||||| |||||||||||| || |||||||||||||| ||||||||||||||||| |||||||||||||||| || |||||||||||||    
T  3226481 tagatttttgacccgtgctccgcttcgggtttattgtaaagggattgacatacgaataat-aaatgcaatatataattggtaacggtgaaaaaa 3226573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 277 - 337
Target Start/End: Original strand, 45417462 - 45417522
Alignment:
Q  277 ataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  45417462 ataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaataaacgtgc 45417522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 3227082 - 3227144
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  3227082 gtataaaatagaaggcatcaaacgtgatcattgatatactcatagtttctagaataaacgtgc 3227144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 21618002 - 21617940
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  21618002 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttttaggacaaacgtgc 21617940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 44099531 - 44099593
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  44099531 gtataaaatagaatgcatcaaacgtcatcattgatatgctcatagtttctagaacaaacgtgc 44099593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 275 - 333
Target Start/End: Complemental strand, 47790890 - 47790832
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaac 333  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  47790890 gtataaaatagaaggcatcaaacatgatcattgatatgctcatagtttctagaacaaac 47790832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 276 - 337
Target Start/End: Complemental strand, 1647789 - 1647728
Alignment:
Q  276 tataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1647789 tataaaatagaagacatcaaatgtgatcattgatatgctcatagtttctagaacaaacgtgc 1647728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 276 - 337
Target Start/End: Complemental strand, 30084206 - 30084145
Alignment:
Q  276 tataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  30084206 tataagatagaaggcattaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 30084145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 5428775 - 5428713
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||    
T  5428775 gtataaaatagaaggcatcaaacgtgatcaatgatatgctcataatttatagaacaaacgtgc 5428713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 125
Target Start/End: Original strand, 6537105 - 6537199
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    ||||||||||||| |||||||| |||||  ||||||||||||   ||||||||||||||||||||||||||||||||| |  |||||| ||||||    
T  6537105 actagatttttgaaccgtgctctgctcggatttattgtaaagaggttgacatacgaataataaaatgcaatatataattgataacggtaaaaaaa 6537199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 21618204 - 21618142
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||    
T  21618204 gtataaaatagaaggcatcaaacgtgataattgatatgctcatagtttctagagaaaacgtgc 21618142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 44262911 - 44262849
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  44262911 gtataaaataaaaggcatcaaacgtgatcattgatatgcttatagtttatagaacaaacgtgc 44262849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 44263555 - 44263493
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||    
T  44263555 gtataaaatagaaggcattaaacgtgatcattgatatgcttatcgtttctagaacaaacgtgc 44263493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 278 - 333
Target Start/End: Original strand, 16165551 - 16165606
Alignment:
Q  278 taaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaac 333  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  16165551 taaaatagaagacatcaaatgtgatcattgatatgctcatagtttctagaacaaac 16165606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 108
Target Start/End: Complemental strand, 52741110 - 52741035
Alignment:
Q  33 tagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataat 108  Q
    ||||||||| | ||||| || | ||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  52741110 tagattttttacccgtgttctgttcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataat 52741035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 275 - 333
Target Start/End: Complemental strand, 18912599 - 18912541
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaac 333  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||    
T  18912599 gtataaaatagaaggcatcaaacgtgataattgatatgttcatagtctctagaacaaac 18912541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 21882836 - 21882746
Alignment:
Q  61 tttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtg-aaaaaataacacgtggtaatccatagtagac 150  Q
    |||||||| |||| |||||||||| ||||||||||||||||||||||| || || |||| |||||| |||| ||| |||||||||||||||    
T  21882836 tttattgttaagggattgacatacaaataataaaatgcaatatataattggtaagggtgaaaaaaagaacaggtgataatccatagtagac 21882746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 205 - 337
Target Start/End: Complemental strand, 27296638 - 27296519
Alignment:
Q  205 tcggtaatcctttcaataattcgg-tatatataaccaagtttacatgaaaattagggtagccgnnnnnnnngtataaaatagaaggcatcaaacgtgatc 303  Q
    |||| |||||| |||||||||||| ||||||||||||| |||||||| ||||||| |||||||             ||||||||||||||||||||||||    
T  27296638 tcggaaatcctatcaataattcgggtatatataaccaaatttacatggaaattagcgtagccgc------------aaatagaaggcatcaaacgtgatc 27296551  T
Q  304 attgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||| ||||||||  ||||||||||||||||||||    
T  27296550 attcatatgctc--agtttctagaacaaacgtgc 27296519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 205 - 264
Target Start/End: Complemental strand, 318925 - 318865
Alignment:
Q  205 tcggtaatcctttcaataattcgg-tatatataaccaagtttacatgaaaattagggtagc 264  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||    
T  318925 tcggtaatcctatcaataattcgggtatatataaccaagtttacatggaaattagggtagc 318865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 21618744 - 21618684
Alignment:
Q  65 ttgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    ||||||||| |||||||||| ||||||||||||||||||||||| || |||||||||||||    
T  21618744 ttgtaaagggattgacatacaaataataaaatgcaatatataattggtaacggtgaaaaaa 21618684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 4100451 - 4100512
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||||||||||   ||||||||||||||| |||||||||||||||||||||||    
T  4100451 gtataaaatagaaggcatcaata-tgatcattgatatgcccatagtttctagaacaaacgtgc 4100512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 279 - 333
Target Start/End: Original strand, 25931810 - 25931864
Alignment:
Q  279 aaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaac 333  Q
    |||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||    
T  25931810 aaaatagaaggcatcaaacgtgataattgatatgctcataatttttagaacaaac 25931864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 105
Target Start/End: Complemental strand, 46533484 - 46533409
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatat 105  Q
    ||||||||| |||| ||||||  ||| |||||||||||| |||| ||| ||||||||||||||||||| |||||||    
T  46533484 aactagattgttgacccgtgcgtcgcacgagtttattgttaagggattaacatacgaataataaaatgtaatatat 46533409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 279 - 337
Target Start/End: Complemental strand, 12115549 - 12115491
Alignment:
Q  279 aaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||||||   |||||||| |||||||||||||||||||| |||||||||    
T  12115549 aaaatagaaggcatcaactatgatcattaatatgctcatagtttctagaccaaacgtgc 12115491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 75 - 125
Target Start/End: Original strand, 23480701 - 23480751
Alignment:
Q  75 attgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    |||||||||||||||||||||| ||||||||||| || |||||||||||||    
T  23480701 attgacatacgaataataaaatacaatatataattggtaacggtgaaaaaa 23480751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 33 - 125
Target Start/End: Original strand, 45416854 - 45416946
Alignment:
Q  33 tagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    |||| |||||| ||||||| | |||  ||||||| |||| | ||||||||||||||||||||||||||||  |||| |  |||||||||||||    
T  45416854 tagaattttgacccgtgctacactcaggtttattataaaaggattgacatacgaataataaaatgcaataagtaattgataacggtgaaaaaa 45416946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 266
Target Start/End: Complemental strand, 1648130 - 1648091
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtagccg 266  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  1648130 ggtatatataaccaagtttacatggaaattagggtagccg 1648091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 266
Target Start/End: Original strand, 6537329 - 6537368
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtagccg 266  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  6537329 ggtatatataaccaagtttacatggaaattagggtagccg 6537368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 266
Target Start/End: Complemental strand, 12115935 - 12115896
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtagccg 266  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  12115935 ggtatatataaccaagtttacatggaaattagggtagccg 12115896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 266
Target Start/End: Complemental strand, 44264385 - 44264346
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtagccg 266  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  44264385 ggtatatataaccaagtttacatggaaattagggtagccg 44264346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 51271753 - 51271812
Alignment:
Q  37 tttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaat 96  Q
    ||||| ||||||||||||||||  ||||||||||  | ||||||||||||||||||||||    
T  51271753 ttttttatccgtgctccgctcggatttattgtaataggattgacatacgaataataaaat 51271812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 266
Target Start/End: Original strand, 52407698 - 52407737
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtagccg 266  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  52407698 ggtatatataaccaagtttacatggaaattagggtagccg 52407737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 264
Target Start/End: Complemental strand, 38684662 - 38684625
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtagc 264  Q
    |||||||||||||||||||||||| |||||||||||||    
T  38684662 ggtatatataaccaagtttacatggaaattagggtagc 38684625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 263
Target Start/End: Original strand, 3226705 - 3226741
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtag 263  Q
    |||||||||||||||||||||||| ||||||||||||    
T  3226705 ggtatatataaccaagtttacatggaaattagggtag 3226741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 263
Target Start/End: Original strand, 6537393 - 6537429
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtag 263  Q
    |||||||||||||||||||||||| ||||||||||||    
T  6537393 ggtatatataaccaagtttacatggaaattagggtag 6537429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 263
Target Start/End: Original strand, 51271960 - 51271996
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtag 263  Q
    |||||||||||||||||||||||| ||||||||||||    
T  51271960 ggtatatataaccaagtttacatggaaattagggtag 51271996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 262
Target Start/End: Original strand, 4100115 - 4100150
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggta 262  Q
    |||||||||||||||||||||||||||||| |||||    
T  4100115 ggtatatataaccaagtttacatgaaaatttgggta 4100150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 205 - 259
Target Start/End: Original strand, 42491768 - 42491823
Alignment:
Q  205 tcggtaatcctttcaataattcgg-tatatataaccaagtttacatgaaaattagg 259  Q
    ||||||||| | |||||||||||| ||||| |||||||||||||||| ||||||||    
T  42491768 tcggtaatcatatcaataattcgggtatatgtaaccaagtttacatggaaattagg 42491823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 265
Target Start/End: Original strand, 25931557 - 25931594
Alignment:
Q  228 gtatatataaccaagtttacatgaaaattagggtagcc 265  Q
    ||||||||||||||||||||||| |||||| |||||||    
T  25931557 gtatatataaccaagtttacatggaaattacggtagcc 25931594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 337
Target Start/End: Complemental strand, 44263086 - 44263057
Alignment:
Q  308 atatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||||||||||||||||||||||    
T  44263086 atatgctcatagtttctagaacaaacgtgc 44263057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 1e-44; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 36642738 - 36642853
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataaca 130  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||    
T  36642738 actagatttttgatccgtgctccgctcgagtttgttgtaaagggattgacatacggataataaaatgcaatatataataggtaacagtgaaaaaataaca 36642837  T
Q  131 cgtggtaatccatagt 146  Q
    |||| |||||||||||    
T  36642838 cgtgataatccatagt 36642853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 53046926 - 53047030
Alignment:
Q  46 cgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataacacgtggtaatccatag 145  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||    
T  53046926 cgtgctccgctcgagtttattgtaaatgaattgacatacgaataataaaatgcaatatataattggtaacggtgaaaaaataacacgtgataatccatag 53047025  T
Q  146 tagac 150  Q
    |||||    
T  53047026 tagac 53047030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 30 - 150
Target Start/End: Complemental strand, 37760972 - 37760852
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataac 129  Q
    |||||||||||||| |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  37760972 aactagatttttgacccgtgctctgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataataggtaacggtgaaaaaataac 37760873  T
Q  130 acgtggtaatccatagtagac 150  Q
    ||||  ||||  |||||||||    
T  37760872 acgtaataatttatagtagac 37760852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 47501155 - 47501271
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtg-aaaaaataac 129  Q
    ||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||| ||||||||||    
T  47501155 actagatttttgacccgtgctccgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataattggtaacggtgaaaaaaataac 47501254  T
Q  130 acgtggtaatccatagt 146  Q
    ||||| |||||||||||    
T  47501255 acgtgataatccatagt 47501271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 30 - 150
Target Start/End: Complemental strand, 24366042 - 24365922
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataac 129  Q
    |||||||||||||| |||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||    
T  24366042 aactagatttttgacccgtgctccgctcgggtttattgtaaagagattgacatacgaataataaaatgcaatatatgataggtaacagtgaaaaaataac 24365943  T
Q  130 acgtggtaatccatagtagac 150  Q
    | ||| |||| ||||||||||    
T  24365942 aggtgataatacatagtagac 24365922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 205 - 337
Target Start/End: Complemental strand, 43017586 - 43017454
Alignment:
Q  205 tcggtaatcctttcaataattcgg-tatatataaccaagtttacatgaaaattagggtagccgnnnnnnnngtataaaatagaaggcatcaaacgtgatc 303  Q
    ||||||||| | |||||||||||| |||||||||||||||||||||  |||||||| ||||||        |||||||||||||||||||||||||||||    
T  43017586 tcggtaatcatatcaataattcgggtatatataaccaagtttacatagaaattaggttagccgaaaaaaa-gtataaaatagaaggcatcaaacgtgatc 43017488  T
Q  304 attgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||||||||||||||||||||||||||    
T  43017487 attgatatgctcatagtttctagaacaaacgtgc 43017454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 836816 - 836934
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataaca 130  Q
    |||||||||||||  |||| |||||| |||||||||||||||  |||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||    
T  836816 actagatttttgactcgtggtccgcttgagtttattgtaaagtgattgacatacaaataataaaatgcaatatataataggtaacggtg-aaaaataaca 836914  T
Q  131 cgtggtaatccatagtagac 150  Q
    |||| |||||||||||||||    
T  836915 cgtgataatccatagtagac 836934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 23777337 - 23777218
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataaca 130  Q
    ||||||||||||| |||||||||||||| |||||||||||||  ||||||||| ||||||||||||||||||||||||||| || ||||||||||||| |    
T  23777337 actagatttttgacccgtgctccgctcgggtttattgtaaagagattgacatatgaataataaaatgcaatatataataggtaatggtgaaaaaataata 23777238  T
Q  131 cgtggtaatccatagtagac 150  Q
    |||  |||||||| ||||||    
T  23777237 cgtaataatccatggtagac 23777218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 208 - 337
Target Start/End: Complemental strand, 46452493 - 46452363
Alignment:
Q  208 gtaatcctttcaataattcgg-tatatataaccaagtttacatgaaaattagggtagccgnnnnnnnngtataaaatagaaggcatcaaacgtgatcatt 306  Q
    |||||||| ||||||| |||| |||||||||||||||||||||  |||||||||||||||        ||||||||||||||||||||||||||||||||    
T  46452493 gtaatcctatcaataagtcgggtatatataaccaagtttacatagaaattagggtagccgaaaaaaaagtataaaatagaaggcatcaaacgtgatcatt 46452394  T
Q  307 gatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||||||||||  |||||||||||    
T  46452393 gatatgctcatagtttctgaaacaaacgtgc 46452363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 31 - 125
Target Start/End: Original strand, 38886834 - 38886928
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||  ||||||||||||||||||||||| || |||||||||||||    
T  38886834 actagatttttgatccgtgctccgctcgagtttattgcaaagggattgacatataaataataaaatgcaatatataattggtaacggtgaaaaaa 38886928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 31 - 147
Target Start/End: Complemental strand, 11454871 - 11454754
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtg-aaaaaataac 129  Q
    ||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||| | ||  ||| ||| ||||||||||    
T  11454871 actagatttttgatccgtgctccgctcggatttattgtaaagggattgacatacgaataataaaatgcaatatatgaaagataacagtgaaaaaaataac 11454772  T
Q  130 acgtggtaatccatagta 147  Q
    || || ||||||||||||    
T  11454771 acatgataatccatagta 11454754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 207 - 337
Target Start/End: Original strand, 836991 - 837124
Alignment:
Q  207 ggtaatcctttcaataattcgg-tatatataaccaagtttacatgaaaattagggtagccgnnnnnnnn--gtataaaatagaaggcatcaaacgtgatc 303  Q
    ||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||| |          |||||||| |||| |||||||||||||||    
T  836991 ggtaatcctatcaataattcgggtatatataaccaagtttacatggaaattagggtagctgaaaaaaaaaagtataaaacagaatgcatcaaacgtgatc 837090  T
Q  304 attgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||||||||||| |||||||||||    
T  837091 attgatatgctcatagtttctaaaacaaacgtgc 837124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 30 - 128
Target Start/End: Complemental strand, 860773 - 860675
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataa 128  Q
    |||||||||||| | |||||||||||||  |||||||||||||  |||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  860773 aactagattttttacccgtgctccgctctggtttattgtaaagagattgacatacgaataataaaatgcaatatataattggtaacggtgaaaaaataa 860675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 205 - 337
Target Start/End: Original strand, 36642912 - 36643048
Alignment:
Q  205 tcggtaatcctttcaataattcgg-tatatataaccaagtttacatgaaaattagggtagccgnnnnnnnn---gtataaaatagaaggcatcaaacgtg 300  Q
    |||||||| || |||||||||||| ||||||||| |||||||||||| ||| |||||||||||           ||||||||||||||||||||||| ||    
T  36642912 tcggtaatgctatcaataattcgggtatatataatcaagtttacatggaaaatagggtagccgaaaaaaaaagagtataaaatagaaggcatcaaacatg 36643011  T
Q  301 atcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||||||||||||||||||||||||||    
T  36643012 atcattgatatgctcatagtttctagaacaaacgtgc 36643048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 20877076 - 20877138
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20877076 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 20877138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 33 - 125
Target Start/End: Original strand, 20876491 - 20876583
Alignment:
Q  33 tagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    ||||||||||| ||||| ||||||||  ||||||||||| | |||||||||||||||||||||||||||||||||| || |||||||||||||    
T  20876491 tagatttttgacccgtgttccgctcggatttattgtaaaaggattgacatacgaataataaaatgcaatatataattggtaacggtgaaaaaa 20876583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 60 - 150
Target Start/End: Complemental strand, 46452641 - 46452551
Alignment:
Q  60 gtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataacacgtggtaatccatagtagac 150  Q
    ||||||| |||||| ||||| |||||||||||||||||||||||||||| || || ||||||||||||||||||| |||| ||||||||||    
T  46452641 gtttattttaaagggattgatatacgaataataaaatgcaatatataatcggtaatggtgaaaaaataacacgtgataatacatagtagac 46452551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 51654266 - 51654204
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  51654266 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaaagtgc 51654204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 31 - 125
Target Start/End: Complemental strand, 51654824 - 51654730
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    ||||||||||||| | |||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||| |  ||| |||||||||    
T  51654824 actagatttttgaccggtgctccgctcgggtttattgtaaagggattgacatacaaataataaaatgcaatatataattgataaccgtgaaaaaa 51654730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 128
Target Start/End: Original strand, 45514224 - 45514321
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataa 128  Q
    ||||||||||||| ||||| |||||||| |||||| ||||| | ||||| ||||||||||||||||||||||||| ||||| |||||| |||||||||    
T  45514224 actagatttttgacccgtgttccgctcgtgtttatcgtaaaaggattgatatacgaataataaaatgcaatatatgataggtaacggttaaaaaataa 45514321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 277 - 337
Target Start/End: Original strand, 53047451 - 53047511
Alignment:
Q  277 ataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  53047451 ataaaatagaaggcatcaaacatgatcattgatatgctcatagtttctagaacaaacgtgc 53047511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 10267465 - 10267370
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    |||||||||||||| |||| || |||||  |||||||||||||| ||||||||||||||||||||||| |||||||||| || |||| ||||||||    
T  10267465 aactagatttttgacccgtacttcgctctggtttattgtaaagggattgacatacgaataataaaatgtaatatataattggtaacgatgaaaaaa 10267370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 33 - 150
Target Start/End: Complemental strand, 2702548 - 2702434
Alignment:
Q  33 tagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa-taacac 131  Q
    ||||||||||| ||||||||     |||||||| ||||||| |||  ||||||||||||||||| ||||||||||| || ||||||||||||| ||||||    
T  2702548 tagatttttgacccgtgctc----tgagtttatggtaaagggattaccatacgaataataaaatacaatatataattggtaacggtgaaaaaactaacac 2702453  T
Q  132 gtggtaatccatagtagac 150  Q
    ||| |||||||||||||||    
T  2702452 gtgataatccatagtagac 2702434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 31 - 108
Target Start/End: Complemental strand, 11523401 - 11523324
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataat 108  Q
    |||||||||||||  ||||||||||||| ||| |||||||||| ||||| ||||||||||||||||||||||||||||    
T  11523401 actagatttttgactcgtgctccgctcgggttgattgtaaagggattgatatacgaataataaaatgcaatatataat 11523324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 18095203 - 18095141
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  18095203 gtataagatagaaggcatcaaacgtgatcattgatatgctcatagtttcgagaccaaacgtgc 18095141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 35560570 - 35560509
Alignment:
Q  205 tcggtaatcctttcaataattcggtatatataaccaagtttacatgaaaattagggtagccg 266  Q
    ||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  35560570 tcggtaatcatatcaataattcgggatatataaccaagtttacatgaaaattagggtagccg 35560509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 75 - 150
Target Start/End: Complemental strand, 43017715 - 43017641
Alignment:
Q  75 attgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataacacgtggtaatccatagtagac 150  Q
    ||||||||||||| |||||| || ||||||||||||| |||||| ||||||||||||||| |||||||||||||||    
T  43017715 attgacatacgaaaaataaa-tgtaatatataataggtaacggtaaaaaaataacacgtgataatccatagtagac 43017641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 35560351 - 35560289
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||||||||| |||||||||||    
T  35560351 gtataaaatagaatgcatcaaatgtgatcattgatattctcatagtttctataacaaacgtgc 35560289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 139
Target Start/End: Complemental strand, 35560696 - 35560636
Alignment:
Q  79 acatacgaataataaaatgcaatatataataggcaacggtgaaaaaataacacgtggtaat 139  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||    
T  35560696 acatatgaataataaaatgcaatatataataggtaacggtgaaaaaataacgcgtgataat 35560636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 33 - 96
Target Start/End: Complemental strand, 2730990 - 2730927
Alignment:
Q  33 tagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaat 96  Q
    |||||||||||  ||||||||||||| ||||| |||||||| ||||||||||||||||||||||    
T  2730990 tagatttttgacacgtgctccgctcgggtttaatgtaaagggattgacatacgaataataaaat 2730927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 291 - 337
Target Start/End: Complemental strand, 11522764 - 11522718
Alignment:
Q  291 atcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  11522764 atcaaacgtgatcattgatatgttcatagtttctagaacaaacgtgc 11522718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 219 - 318
Target Start/End: Complemental strand, 37760784 - 37760691
Alignment:
Q  219 aataattcgg-tatatataaccaagtttacatgaaaattagggtagccgnnnnnnnngtataaaatagaaggcatcaaacgtgatcattgatatgctcat 317  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||            | |||||||||| ||||||||||||||||||||||||||||    
T  37760784 aataattcgggtatatataaccaagtttacatgaaaattagggtagc-------aaaaaaaaaaatagaagacatcaaacgtgatcattgatatgctcat 37760692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 11454201 - 11454126
Alignment:
Q  77 tgacatacgaataataaaatgcaatatata--ataggcaacggtgaaaaaataacacgtggtaatccatagtagac 150  Q
    |||||||| |||||||||||||||||| |   ||||| || ||||||||||||||||||| |||||||||||||||    
T  11454201 tgacatacaaataataaaatgcaatatgtgtgataggtaatggtgaaaaaataacacgtgataatccatagtagac 11454126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 150
Target Start/End: Complemental strand, 17758050 - 17757972
Alignment:
Q  75 attgacatacgaataataaaatgcaatatataataggcaacggtgaa---aaaataacacgtggtaatccatagtagac 150  Q
    ||||||||||||||||||||||| |||||||||| || |||||||||   |||| |||| ||| |||||||||||||||    
T  17758050 attgacatacgaataataaaatgtaatatataattggtaacggtgaaaaaaaaagaacaggtgataatccatagtagac 17757972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 150
Target Start/End: Complemental strand, 19059370 - 19059292
Alignment:
Q  75 attgacatacgaataataaaatgcaatatataataggcaacggtgaa---aaaataacacgtggtaatccatagtagac 150  Q
    ||||||||||||||||||||||| |||||||||| || |||||||||   |||| |||| ||| |||||||||||||||    
T  19059370 attgacatacgaataataaaatgtaatatataattggtaacggtgaaaaaaaaagaacaggtgataatccatagtagac 19059292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 860313 - 860247
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcatt----gatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||||| |||||||||||||||    |||||||||||||||||||||| ||| ||||    
T  860313 gtataaaatagaaggcttcaaacgtgatcattgatagatatgctcatagtttctagaataaatgtgc 860247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 40051101 - 40051039
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||| || |||||||||||||||| ||||| |||||  |||||||||||||||||| |||||    
T  40051101 gtatagaacagaaggcatcaaacgtaatcatcgatattgtcatagtttctagaacaatcgtgc 40051039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 125
Target Start/End: Original strand, 25916720 - 25916785
Alignment:
Q  60 gtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    ||||||||| || | ||||||||| ||| |||||||||||||||||||| || |||| ||||||||    
T  25916720 gtttattgttaaaggattgacatatgaaaaataaaatgcaatatataattggtaacgttgaaaaaa 25916785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 266
Target Start/End: Complemental strand, 2730774 - 2730738
Alignment:
Q  230 atatataaccaagtttacatgaaaattagggtagccg 266  Q
    ||||||||||||||||||||| |||||||||||||||    
T  2730774 atatataaccaagtttacatggaaattagggtagccg 2730738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 263
Target Start/End: Complemental strand, 11523176 - 11523140
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtag 263  Q
    |||||||||||||||||||||||| ||||||||||||    
T  11523176 ggtatatataaccaagtttacatggaaattagggtag 11523140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 263
Target Start/End: Complemental strand, 51654599 - 51654563
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtag 263  Q
    |||||||||||||||||||||||||||||| ||||||    
T  51654599 ggtatatataaccaagtttacatgaaaattggggtag 51654563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 266
Target Start/End: Complemental strand, 860550 - 860511
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtagccg 266  Q
    |||||||||||||||||||||||| ||||||||| |||||    
T  860550 ggtatatataaccaagtttacatggaaattagggaagccg 860511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 266
Target Start/End: Complemental strand, 10267233 - 10267194
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtagccg 266  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  10267233 ggtatatataactaagtttacatgaaaattaaggtagccg 10267194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 266
Target Start/End: Original strand, 20876717 - 20876756
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtagccg 266  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  20876717 ggtatatataaccaaatttaaatgaaaattagggtagccg 20876756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 337
Target Start/End: Original strand, 38887473 - 38887503
Alignment:
Q  307 gatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||||||||||||||||||||    
T  38887473 gatatgctcatagtttctagaacaaacgtgc 38887503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 150
Target Start/End: Original strand, 35960257 - 35960294
Alignment:
Q  113 aacggtgaaaaaataacacgtggtaatccatagtagac 150  Q
    |||||||||||||||||||||| |||| ||||||||||    
T  35960257 aacggtgaaaaaataacacgtgataattcatagtagac 35960294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 303
Target Start/End: Original strand, 47502921 - 47502949
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatc 303  Q
    |||||||||||||||||||||||||||||    
T  47502921 gtataaaatagaaggcatcaaacgtgatc 47502949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 318
Target Start/End: Complemental strand, 49677286 - 49677242
Alignment:
Q  275 gtataaaatagaaggcatca-aacgtgatcattgatatgctcata 318  Q
    |||||||||||||||||||  ||| ||||||||||||||||||||    
T  49677286 gtataaaatagaaggcatcttaacctgatcattgatatgctcata 49677242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 4e-41; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 205 - 337
Target Start/End: Original strand, 3458923 - 3459056
Alignment:
Q  205 tcggtaatcctttcaataattcg-gtatatataaccaagtttacatgaaaattagggtagccgnnnnnnnngtataaaatagaaggcatcaaacgtgatc 303  Q
    ||||||||||| ||||||||| | ||||||||||||||||||||||| |||||||||||| ||        |||||||||||||||||||||||||||||    
T  3458923 tcggtaatcctatcaataatttgagtatatataaccaagtttacatggaaattagggtagtcgaaaaaaaagtataaaatagaaggcatcaaacgtgatc 3459022  T
Q  304 attgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||||||||||||||||||||||||||    
T  3459023 attgatatgctcatagtttctagaacaaacgtgc 3459056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 37 - 150
Target Start/End: Complemental strand, 42046146 - 42046033
Alignment:
Q  37 tttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataacacgtggt 136  Q
    ||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |    
T  42046146 tttttgacccgtgctccgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataataggtaacagtgaaaaaataacacgtgat 42046047  T
Q  137 aatccatagtagac 150  Q
    ||| ||||||||||    
T  42046046 aattcatagtagac 42046033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 30 - 150
Target Start/End: Original strand, 37197291 - 37197411
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataac 129  Q
    |||| ||||||||| || ||||||| ||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  37197291 aactcgatttttgacccatgctccgatcgggtttattgtaaagggattgatatacgaataataaaatgcaatatataataggtaacggtgaaaaaataac 37197390  T
Q  130 acgtggtaatccatagtagac 150  Q
    || || |||||||||||||||    
T  37197391 acatgataatccatagtagac 37197411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 30 - 150
Target Start/End: Original strand, 30436839 - 30436960
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaatt-gacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataa 128  Q
    |||||||||||||| |||||||||||||| |||||||||||||| ||| ||||||||||||||||| ||||||||||||| |  ||||||||||||||||    
T  30436839 aactagatttttgacccgtgctccgctcgggtttattgtaaagggatttgacatacgaataataaagtgcaatatataattgataacggtgaaaaaataa 30436938  T
Q  129 cacgtggtaatccatagtagac 150  Q
     ||||| |||||||||||||||    
T  30436939 tacgtgataatccatagtagac 30436960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 32 - 150
Target Start/End: Original strand, 39921841 - 39921959
Alignment:
Q  32 ctagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataacac 131  Q
    |||||||||||| |||||||  ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||  || ||||||||||||    
T  39921841 ctagatttttgacccgtgctttgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataataggtaatagttaaaaaataacac 39921940  T
Q  132 gtggtaatccatagtagac 150  Q
    ||| ||||||||| |||||    
T  39921941 gtgataatccatattagac 39921959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 205 - 337
Target Start/End: Original strand, 37197466 - 37197598
Alignment:
Q  205 tcggtaatcctttcaataattc-ggtatatataaccaagtttacatgaaaattagggtagccgnnnnnnnngtataaaatagaaggcatcaaacgtgatc 303  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||          |||||| ||||||||||||||||||||||    
T  37197466 tcggtaatcctatcaataattcaggtatatataaccaagtttacatggaaattagggtagca-aacaaaaagtataacatagaaggcatcaaacgtgatc 37197564  T
Q  304 attgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||||||||||||||||||||| ||||    
T  37197565 attgatatgctcatagtttctagaacaaatgtgc 37197598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 30 - 150
Target Start/End: Complemental strand, 32063306 - 32063187
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataac 129  Q
    ||||||||||||||  ||||||||| |||  ||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  32063306 aactagatttttgactcgtgctccg-tcggatttattgtaaagggattaacatacgaataataaaatgcaatatataataggtaacgatgaaaaaataac 32063208  T
Q  130 acgtggtaatccatagtagac 150  Q
    | ||| |||||||||||||||    
T  32063207 atgtgataatccatagtagac 32063187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 45 - 150
Target Start/End: Original strand, 603876 - 603982
Alignment:
Q  45 ccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtg-aaaaaataacacgtggtaatccat 143  Q
    ||||||||||| |||||||||||  |||| |||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||| ||||||||    
T  603876 ccgtgctccgcgcgagtttattgctaagggattgacatacgaataataaaatgcaatatataattggtaacggtgaaaaaaataacacgtgataatccat 603975  T
Q  144 agtagac 150  Q
    |||||||    
T  603976 agtagac 603982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 75 - 150
Target Start/End: Original strand, 3458793 - 3458868
Alignment:
Q  75 attgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataacacgtggtaatccatagtagac 150  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  3458793 attgacatacgaataataaaatgcaatatataataggtaacggtgaaaaaataacacgtgataatccatagtagac 3458868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 30 - 150
Target Start/End: Complemental strand, 3990896 - 3990770
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaata------tataataggcaacggtgaaaa 123  Q
    |||||||||||||| |||||||||||||| |||||||||||||   |||||||| ||||||||||||||||||      ||||||||| || ||||||||    
T  3990896 aactagatttttgacccgtgctccgctcgggtttattgtaaagaggttgacataagaataataaaatgcaatatatatatataataggtaatggtgaaaa 3990797  T
Q  124 aataacacgtggtaatccatagtagac 150  Q
    ||||||||||| |||||||||||||||    
T  3990796 aataacacgtgataatccatagtagac 3990770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 14683499 - 14683404
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    |||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||||| || ||||||| |||||    
T  14683499 aactagatttttgacccgtgctctgctcgagtttattgtaaagggattgacatacgaataataaaatgcaatacataattggtaacggtggaaaaa 14683404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 37 - 144
Target Start/End: Complemental strand, 44434690 - 44434583
Alignment:
Q  37 tttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataacacgtggt 136  Q
    ||||||||| ||||||||  ||||||||||||||||  |||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||| |    
T  44434690 tttttgatctgtgctccgtacgagtttattgtaaagcgattgacatacgaataataaaatgcaaaatataattggtaacggtgaaaaaataacacgtgat 44434591  T
Q  137 aatccata 144  Q
    ||| ||||    
T  44434590 aattcata 44434583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 38111800 - 38111705
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    |||||||||||||| | |||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||| ||||||||    
T  38111800 aactagatttttgacctgtgctctgttcgagtttattgtaaagggattgacatacgaataataaaatgcaatatataattggtaacgatgaaaaaa 38111705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 33 - 150
Target Start/End: Complemental strand, 1199935 - 1199818
Alignment:
Q  33 tagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataacacg 132  Q
    |||||||||||   |||||| ||||| |||||||||||||  ||||||||| |||||||||||||||||||  ||| |  ||||||||||||||||||||    
T  1199935 tagatttttgacaagtgctctgctcgggtttattgtaaagtgattgacatatgaataataaaatgcaatatgcaattgataacggtgaaaaaataacacg 1199836  T
Q  133 tggtaatccatagtagac 150  Q
    || |||||||||||||||    
T  1199835 tgataatccatagtagac 1199818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 33 - 128
Target Start/End: Complemental strand, 30206610 - 30206515
Alignment:
Q  33 tagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataa 128  Q
    ||||||||||| || ||||||| || | ||||||||||||| |||||||||| ||||||||||||||||||||||| || ||||||||||||||||    
T  30206610 tagatttttgacccatgctccgttcaaatttattgtaaagggattgacatacaaataataaaatgcaatatataattggtaacggtgaaaaaataa 30206515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 205 - 337
Target Start/End: Complemental strand, 42045977 - 42045846
Alignment:
Q  205 tcggtaatcctttcaataattcgg---tatatataaccaagtttacatgaaaattagggtagccgnnnnnnnngtataaaatagaaggcatcaaacgtga 301  Q
    ||||||||||| |||||||||| |   |||||||||||||||||||| | ||||||| ||||           |||||||||||||||||||||||||||    
T  42045977 tcggtaatcctatcaataattcaggtatatatataaccaagtttacagggaaattagagtag----aaaaaaagtataaaatagaaggcatcaaacgtga 42045882  T
Q  302 tcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||||||||||||| |||||||||||    
T  42045881 tcattgatatgctcatagtttctaaaacaaacgtgc 42045846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 1198124 - 1198062
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1198124 gtataaaatagaaggcaccaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 1198062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 31 - 125
Target Start/End: Complemental strand, 9389589 - 9389495
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    |||||||||||||  |||||||||||||  |||||| |||| | |||||||||||||||||||||||||||||||||| || |||||||||||||    
T  9389589 actagatttttgactcgtgctccgctcggatttattataaaaggattgacatacgaataataaaatgcaatatataattggtaacggtgaaaaaa 9389495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 275 - 333
Target Start/End: Original strand, 30438902 - 30438960
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaac 333  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30438902 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaac 30438960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 275 - 332
Target Start/End: Complemental strand, 3990456 - 3990399
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaa 332  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3990456 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaa 3990399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 276 - 337
Target Start/End: Original strand, 27853535 - 27853596
Alignment:
Q  276 tataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  27853535 tataaaatagaaggcatcaaacgtgatcattgatatgcttatagtttctagaacaaacgtgc 27853596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 276 - 337
Target Start/End: Complemental strand, 30206025 - 30205964
Alignment:
Q  276 tataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  30206025 tataaaatagaaggcatcaaacgtgatcattgatatgctcatggtttctagaacaaacgtgc 30205964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 29 - 125
Target Start/End: Original strand, 23959898 - 23959994
Alignment:
Q  29 aaactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    |||||| |||||||| |||||||||| | | ||||||| |||||| |||||||||||||||||||||||||||||||||| || |||| ||||||||    
T  23959898 aaactaaatttttgacccgtgctccgtttgggtttattataaagggattgacatacgaataataaaatgcaatatataattggtaacgatgaaaaaa 23959994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 31 - 107
Target Start/End: Original strand, 27852982 - 27853058
Alignment:
Q  31 actagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataa 107  Q
    ||||||||||||| |||||||| |||||||||||||||||||  ||| |||||||||||||||||||||||||||||    
T  27852982 actagatttttgacccgtgctctgctcgagtttattgtaaagagattaacatacgaataataaaatgcaatatataa 27853058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 38 - 122
Target Start/End: Complemental strand, 35618101 - 35618017
Alignment:
Q  38 ttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaa 122  Q
    |||||| || ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||    
T  35618101 ttttgacccatgctccgctcgggtttcttgtaaaggaattgacatacgaataataaaatgcaatatataattgataacggtgaaa 35618017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 23086469 - 23086374
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    |||||||||||||| || ||||||||||| ||||| |||||||| ||||||||||| |||||||||||||||||||||| || |||  ||||||||    
T  23086469 aactagatttttgacccatgctccgctcgggtttactgtaaagggattgacatacggataataaaatgcaatatataattggtaacaatgaaaaaa 23086374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 34947719 - 34947657
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  34947719 gtataaaatagaaggcatcaaacatgatcattgatatgctcatagtttctaaaacaaacgtgc 34947657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 275 - 335
Target Start/End: Complemental strand, 3990395 - 3990335
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgt 335  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  3990395 gtataaaatagaaagcatcaaacatgatcattgatatgctcatagtttctagaacaaacgt 3990335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 34948333 - 34948237
Alignment:
Q  29 aaactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    |||||| |||||||| ||||||| || ||| |||||||||||| | ||||||||||||||||||||||| |||||||||| || ||||| |||||||    
T  34948333 aaactacatttttgagccgtgcttcgttcgggtttattgtaaatggattgacatacgaataataaaatgtaatatataattgggaacggcgaaaaaa 34948237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 278 - 337
Target Start/End: Complemental strand, 13797669 - 13797610
Alignment:
Q  278 taaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13797669 taaaatagaagacatcaaacgtgatcattgatatgctcatagtttctagaacaaatgtgc 13797610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 205 - 337
Target Start/End: Complemental strand, 32063132 - 32063002
Alignment:
Q  205 tcggtaatcctttcaataattcgg-tatatataaccaagtttacatgaaaattagggtagccgnnnnnnnngtataaaatagaaggcatcaaacgtgatc 303  Q
    ||||||||||| |||||||||||| ||||||||||| |||||| ||| ||||||||||||||           | ||||||||| ||||||||| |||||    
T  32063132 tcggtaatcctatcaataattcgggtatatataaccgagtttagatggaaattagggtagccaaaaaagaa--aaaaaatagaacgcatcaaacttgatc 32063035  T
Q  304 attgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||| |||||||||||||||||||||    
T  32063034 attgatatgctc-tagtttctagaacaaacgtgc 32063002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 276 - 334
Target Start/End: Original strand, 23960439 - 23960497
Alignment:
Q  276 tataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacg 334  Q
    |||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||    
T  23960439 tataaaatagaaagcattaaacgtgatcatggatatgctcatagtttctagaacaaacg 23960497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 275 - 336
Target Start/End: Original strand, 27854279 - 27854340
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacgtg 336  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||| || |||||||    
T  27854279 gtataaaatagaaggcatcaaacgtgatcattgatatgttcatactttctaaaataaacgtg 27854340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 64 - 150
Target Start/End: Complemental strand, 44015192 - 44015105
Alignment:
Q  64 attgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtg-aaaaaataacacgtggtaatccatagtagac 150  Q
    |||||||||| ||||||||||||||| |||||||||||||||||  || ||  ||| ||||||||||||||| |||| ||||||||||    
T  44015192 attgtaaaggtattgacatacgaatagtaaaatgcaatatataactggtaatagtgaaaaaaataacacgtgataattcatagtagac 44015105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 34588430 - 34588519
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    |||| ||||||||| |||||||||||||| |||||||||||||| ||||      |||||||||||||||||| ||||| || ||| |||||||||    
T  34588430 aactggatttttgacccgtgctccgctcgggtttattgtaaagggattg------gaataataaaatgcaatacataattggtaacagtgaaaaaa 34588519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 275 - 334
Target Start/End: Complemental strand, 9389007 - 9388948
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaacg 334  Q
    ||||||||||||| ||||||||| |||| ||||||||||||||| |||||| ||||||||    
T  9389007 gtataaaatagaatgcatcaaacatgatgattgatatgctcataatttctacaacaaacg 9388948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 266
Target Start/End: Complemental strand, 30206381 - 30206342
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtagccg 266  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  30206381 ggtatatataaccaagtttacatgaaaattagggtagccg 30206342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 266
Target Start/End: Complemental strand, 38111573 - 38111534
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtagccg 266  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  38111573 ggtatatataaccaagtttacatgaaaattagggtagccg 38111534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 3990715 - 3990653
Alignment:
Q  205 tcggtaatcctttcaataattcgg-tatatataaccaagtttacatgaaaattagggtagccg 266  Q
    ||||||||| | |||||||||||| |||||||||| ||||||||||| |||||||||||||||    
T  3990715 tcggtaatcatatcaataattcgggtatatataactaagtttacatggaaattagggtagccg 3990653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 266
Target Start/End: Complemental strand, 9389365 - 9389326
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggtagccg 266  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  9389365 ggtatatataaccaagtttacatgaaaattaaggtagccg 9389326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 318
Target Start/End: Original strand, 40399374 - 40399417
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcata 318  Q
    |||||||||| |||||||||| ||||||||||||||||||||||    
T  40399374 gtataaaataaaaggcatcaatcgtgatcattgatatgctcata 40399417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 123
Target Start/End: Original strand, 13461328 - 13461372
Alignment:
Q  79 acatacgaataataaaatgcaatatataataggcaacggtgaaaa 123  Q
    |||||| ||||||||||||||||||||||| || |||||||||||    
T  13461328 acatacaaataataaaatgcaatatataattggtaacggtgaaaa 13461372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 262
Target Start/End: Original strand, 27853201 - 27853236
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggta 262  Q
    |||||||||||||||||||||||| |||||||||||    
T  27853201 ggtatatataaccaagtttacatggaaattagggta 27853236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 298 - 333
Target Start/End: Complemental strand, 35617906 - 35617871
Alignment:
Q  298 gtgatcattgatatgctcatagtttctagaacaaac 333  Q
    |||||||| |||||||||||||||||||||||||||    
T  35617906 gtgatcatagatatgctcatagtttctagaacaaac 35617871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 125
Target Start/End: Complemental strand, 14841086 - 14841021
Alignment:
Q  60 gtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    ||||||||| |||  | |||||||||||||| ||||| |||||| |||| || |||||||||||||    
T  14841086 gtttattgttaagagactgacatacgaataaaaaaatacaatatgtaattggtaacggtgaaaaaa 14841021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 337
Target Start/End: Original strand, 23960696 - 23960725
Alignment:
Q  308 atatgctcatagtttctagaacaaacgtgc 337  Q
    ||||||||||||||||||||||||||||||    
T  23960696 atatgctcatagtttctagaacaaacgtgc 23960725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 318
Target Start/End: Complemental strand, 44014675 - 44014634
Alignment:
Q  278 taaaatagaaggcatca-aacgtgatcattgatatgctcata 318  Q
    ||||||||||||||||| ||| ||||||||||||||||||||    
T  44014675 taaaatagaaggcatcataacctgatcattgatatgctcata 44014634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 30 - 150
Target Start/End: Original strand, 1331 - 1452
Alignment:
Q  30 aactagatttttgatcc-gtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataa 128  Q
    ||||||||||||||||| |||||||||||| |||||||||||||| ||||||| |||||||||||||| |||||||| ||||| ||| ||||||||||||    
T  1331 aactagatttttgatcccgtgctccgctcgggtttattgtaaagggattgacaaacgaataataaaatacaatatatgataggtaacagtgaaaaaataa 1430  T
Q  129 cacgtggtaatccatagtagac 150  Q
    || ||| |||||||||||||||    
T  1431 catgtgataatccatagtagac 1452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 78; Significance: 3e-36; HSPs: 2)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 205 - 337
Target Start/End: Complemental strand, 13574 - 13441
Alignment:
Q  205 tcggtaatcctttcaataattcgg-tatatataaccaagtttacatgaaaattagggtagccgnnnnnnnngtataaaatagaaggcatcaaacgtgatc 303  Q
    ||||||||||| |||||||||||| |||||||||||||||||| ||| |||||||||||||||        |||||||||||||||  ||||||||||||    
T  13574 tcggtaatcctatcaataattcgggtatatataaccaagtttagatggaaattagggtagccgaaaaaaaagtataaaatagaaggtgtcaaacgtgatc 13475  T
Q  304 attgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||||||||||||||||| |||||||||||    
T  13474 attgatatgctcatagtttctacaacaaacgtgc 13441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 150
Target Start/End: Complemental strand, 13747 - 13629
Alignment:
Q  33 tagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtg-aaaaaataacac 131  Q
    ||||||||||| |||||||| ||||| ||||| |||||||| ||||||||||  ||||||||||||| ||||||||||| || |||| ||||||||||||    
T  13747 tagatttttgacccgtgctcagctcgggtttaatgtaaagggattgacatacagataataaaatgcactatataataggtaatggtgaaaaaaataacac 13648  T
Q  132 gtggtaatccatagtagac 150  Q
    ||| || ||||||||||||    
T  13647 gtgatactccatagtagac 13629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 78; Significance: 3e-36; HSPs: 3)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 30 - 150
Target Start/End: Original strand, 163383 - 163504
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataac 129  Q
    |||||||||||||| ||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||    
T  163383 aactagatttttgacccgtgctccactcgggtttattgtaaagggattgacatacgaataataaaatgcaatatgtaataggtaacgatgaaaaaataac 163482  T
Q  130 acgtggtaat-ccatagtagac 150  Q
     |||| |||| |||||||||||    
T  163483 ccgtgataataccatagtagac 163504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 275 - 332
Target Start/End: Original strand, 163595 - 163652
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctagaacaaa 332  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  163595 gtataaaatagaaggcatcaaacgtgatcattgatatgctcatagtttctaaaacaaa 163652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 163656 - 163722
Alignment:
Q  275 gtataaaatagaaggcatcaaacgtgatca----ttgatatgctcatagtttctagaacaaacgtgc 337  Q
    |||||||| |||||||||||||||||||||    |||||||||||||||||||||||||||||||||    
T  163656 gtataaaacagaaggcatcaaacgtgatcagtcattgatatgctcatagtttctagaacaaacgtgc 163722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 30 - 128
Target Start/End: Complemental strand, 13525 - 13427
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataa 128  Q
    |||||||||||||| | ||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||    
T  13525 aactagatttttgacctgtgatccgcttgagtttatcgtaaaggaattgacatacgaataataaaatgcaatatataattggtaacagtgaaaaaataa 13427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 262
Target Start/End: Complemental strand, 13295 - 13260
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggta 262  Q
    |||||||||||||||||||||||| |||||||||||    
T  13295 ggtatatataaccaagtttacatggaaattagggta 13260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 30 - 150
Target Start/End: Complemental strand, 105069 - 104948
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtg-aaaaaataa 128  Q
    |||||||||||||| ||||||| |||||| ||||||| |||||| ||||| ||||||||||||||||||| |||||||| || ||| ||| |||||||||    
T  105069 aactagatttttgacccgtgcttcgctcgggtttattataaagggattgagatacgaataataaaatgcattatataattggtaacagtgaaaaaaataa 104970  T
Q  129 cacgtggtaatccatagtagac 150  Q
    |||||  |||||||||||||||    
T  104969 cacgttataatccatagtagac 104948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 147
Target Start/End: Complemental strand, 127719 - 127600
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtg--aaaaaata 127  Q
    |||||||||||||| |||| || || ||| |||| || ||||||  |||| ||||||||||||||||||| |||||||| || ||| |||  ||||||||    
T  127719 aactagatttttgacccgtccttcgttcgggtttgttataaaggggttgagatacgaataataaaatgcattatataattggtaacagtgaaaaaaaata 127620  T
Q  128 acacgtggtaatccatagta 147  Q
    ||||||| ||||| ||||||    
T  127619 acacgtgataatctatagta 127600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 217 - 337
Target Start/End: Original strand, 14377 - 14498
Alignment:
Q  217 tcaataattcgg-tatatataaccaagtttacatgaaaattagggtagccgnnnnnnnngtataaaatagaaggcatcaaacgtgatcattgatatgctc 315  Q
    |||||||||||| |||||||||||||||||||||  ||| |||| ||| ||        |||||||||||||| |||||| |||||||||||||||||||    
T  14377 tcaataattcgggtatatataaccaagtttacatagaaaataggatagtcggaaaaaaagtataaaatagaagacatcaatcgtgatcattgatatgctc 14476  T
Q  316 atagtttctagaacaaacgtgc 337  Q
    ||||||||||||| ||||||||    
T  14477 atagtttctagaaaaaacgtgc 14498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 30 - 143
Target Start/End: Original strand, 70579 - 70693
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtg-aaaaaataa 128  Q
    |||||||||||||| || |||| |||||| ||||||||| |||| ||||| ||||||||||||||||||| |||||||| || ||| ||| |||||||||    
T  70579 aactagatttttgacccatgcttcgctcgggtttattgttaagggattgagatacgaataataaaatgcattatataattggtaacagtgaaaaaaataa 70678  T
Q  129 cacgtggtaatccat 143  Q
    |||||  ||||||||    
T  70679 cacgttataatccat 70693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 125
Target Start/End: Original strand, 12134 - 12223
Alignment:
Q  36 atttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaa 125  Q
    |||||||| |||||||||||||| |||||||||||||  ||||||||| ||||||||||||||||||| |||| |  |||| ||||||||    
T  12134 atttttgacccgtgctccgctcgggtttattgtaaagtgattgacatatgaataataaaatgcaatatgtaattgataacgatgaaaaaa 12223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 262
Target Start/End: Original strand, 12346 - 12381
Alignment:
Q  227 ggtatatataaccaagtttacatgaaaattagggta 262  Q
    |||||||||||||||||||||||| |||||||||||    
T  12346 ggtatatataaccaagtttacatggaaattagggta 12381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 30 - 150
Target Start/End: Original strand, 11969 - 12090
Alignment:
Q  30 aactagatttttgatccgtgctccgctcgagtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggcaacggtg-aaaaaataa 128  Q
    ||||||||| |||| | ||||  ||| |||||||||| | |||| ||||||||| |||||||||||||||||||||||| |  ||| ||| |||||| ||    
T  11969 aactagattgttgacctgtgcgtcgcacgagtttattattaagggattgacatatgaataataaaatgcaatatataattgataacagtgaaaaaaagaa 12068  T
Q  129 cacgtggtaatccatagtagac 150  Q
    || ||| ||| |||||||||||    
T  12069 caggtgataaaccatagtagac 12090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 109
Target Start/End: Complemental strand, 16642 - 16593
Alignment:
Q  60 gtttattgtaaaggaattgacatacgaataataaaatgcaatatataata 109  Q
    |||||||||| |  ||||||||||||||||||||||||||||||||||||    
T  16642 gtttattgtacaataattgacatacgaataataaaatgcaatatataata 16593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 2936 times since January 2019
Visitors: 4805