View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0752-Insertion-15 (Length: 324)

Name: NF0752-Insertion-15
Description: NF0752
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0752-Insertion-15
NF0752-Insertion-15
[»] chr6 (30 HSPs)
chr6 (8-307)||(26861269-26861567)
chr6 (8-121)||(31284126-31284239)
chr6 (8-127)||(27593256-27593375)
chr6 (8-127)||(27677850-27677969)
chr6 (8-121)||(27678784-27678897)
chr6 (8-121)||(27706638-27706751)
chr6 (8-121)||(26622814-26622927)
chr6 (8-121)||(26728792-26728905)
chr6 (8-99)||(26884023-26884114)
chr6 (8-139)||(27338301-27338432)
chr6 (8-139)||(27399041-27399172)
chr6 (8-129)||(26655819-26655940)
chr6 (8-129)||(26761790-26761911)
chr6 (8-121)||(27229070-27229183)
chr6 (8-129)||(28786108-28786229)
chr6 (8-129)||(28792229-28792350)
chr6 (8-138)||(27698730-27698860)
chr6 (8-138)||(27725081-27725211)
chr6 (8-121)||(26802280-26802393)
chr6 (8-121)||(28780977-28781090)
chr6 (8-241)||(26823571-26823791)
chr6 (8-138)||(27718615-27718745)
chr6 (8-121)||(27611238-27611351)
chr6 (8-97)||(27604941-27605030)
chr6 (8-97)||(28325343-28325432)
chr6 (55-121)||(26018770-26018836)
chr6 (55-121)||(26139474-26139540)
chr6 (12-61)||(2184186-2184235)
chr6 (8-61)||(28242702-28242755)
chr6 (9-61)||(28234462-28234514)
[»] scaffold0277 (2 HSPs)
scaffold0277 (8-129)||(4907-5028)
scaffold0277 (8-121)||(13868-13981)
[»] scaffold0349 (3 HSPs)
scaffold0349 (8-138)||(3658-3788)
scaffold0349 (8-138)||(14591-14721)
scaffold0349 (32-138)||(8061-8167)
[»] scaffold1254 (1 HSPs)
scaffold1254 (8-129)||(153-274)
[»] scaffold0419 (1 HSPs)
scaffold0419 (8-129)||(7355-7476)
[»] chr4 (5 HSPs)
chr4 (8-129)||(18699623-18699744)
chr4 (8-129)||(18724308-18724429)
chr4 (8-121)||(18731727-18731840)
chr4 (8-121)||(18655700-18655813)
chr4 (8-121)||(18679790-18679903)
[»] chr1 (3 HSPs)
chr1 (33-129)||(28164610-28164706)
chr1 (8-98)||(28127903-28127993)
chr1 (8-126)||(268580-268698)
[»] scaffold0038 (3 HSPs)
scaffold0038 (8-97)||(116658-116747)
scaffold0038 (8-61)||(42864-42917)
scaffold0038 (9-61)||(34623-34675)
[»] chr8 (1 HSPs)
chr8 (8-121)||(29274006-29274119)
[»] scaffold0713 (1 HSPs)
scaffold0713 (55-121)||(5916-5982)
[»] scaffold0781 (1 HSPs)
scaffold0781 (12-61)||(91-140)
[»] scaffold0019 (1 HSPs)
scaffold0019 (8-97)||(58518-58607)


Alignment Details
Target: chr6 (Bit Score: 272; Significance: 1e-152; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 8 - 307
Target Start/End: Complemental strand, 26861567 - 26861269
Alignment:
Q  8 gtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggt 107  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  26861567 gtagagattaccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacctggtatttgaatccataggaaatggaagaggaagagcaaggt 26861468  T
Q  108 gattgcatagccatcagaattgggataaataattggatgagaaaaaatagtttgggaatgcaaactatgaacaaataagtaactgtggtctgtgaagtct 207  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  26861467 gattgcatagccatcagaattgg-ataaataattggatgagaaaaaatagtttaggaatgcaaactatgaacaaataagtaactgtggtctgtgaagtct 26861369  T
Q  208 ctaatatatgtaactataaaaggagaaatcttatcttatgatattaatggtaattgtgcaatcttatccttgtgaaccaatcacacaataatatcattta 307  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  26861368 ctaatatatgtaactataaaaggagaaatcttatcttatgataataatggtaattgtgaaatcttatccttgtgaaccaatcacacaataatatcattta 26861269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 31284239 - 31284126
Alignment:
Q  8 gtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggt 107  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||| |||||||||||| ||| |    
T  31284239 gtagagattgccggtgaaaccataccgagtgtcacttcccctgaaactaaggaatacttggtatttgaatacataggaaattgaagaggaagaggaagat 31284140  T
Q  108 gattgcatagccat 121  Q
    ||||||||||||||    
T  31284139 gattgcatagccat 31284126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 27593256 - 27593375
Alignment:
Q  8 gtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggt 107  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||| |||| ||||||| |||||    
T  27593256 gtagagattgccggtgaaaccgtaccgagtgtcacttcctctgaaactgaggaatacttggtatttgtaatcataggaaattgaagtggaagaggaaggt 27593355  T
Q  108 gattgcatagccatcagaat 127  Q
    |||||||||||||| |||||    
T  27593356 gattgcatagccatgagaat 27593375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 27677850 - 27677969
Alignment:
Q  8 gtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggt 107  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||| |  |||||||||| |||| ||||||| |||||    
T  27677850 gtagagattgccggtgaaaccgtaccgagtgtcacttcctctgaaattgaggaatacttggtatttgtactcataggaaattgaagtggaagaggaaggt 27677949  T
Q  108 gattgcatagccatcagaat 127  Q
    |||||||||||||| |||||    
T  27677950 gattgcatagccatgagaat 27677969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 27678897 - 27678784
Alignment:
Q  8 gtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggt 107  Q
    ||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||| |||| ||||||| |||||    
T  27678897 gtagagattcccggtgaaaccgtaccgagtgtcacttcctctgaaactgaggaatacttggtatttgtactcataggaaattgaagtggaagaggaaggt 27678798  T
Q  108 gattgcatagccat 121  Q
    ||||||||||||||    
T  27678797 gattgcatagccat 27678784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 27706638 - 27706751
Alignment:
Q  8 gtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggt 107  Q
    |||||||||||| || ||||| ||||||||||||| ||||||||||||||||||||||||||||||| |  |||||||||| |||| ||||||| |||||    
T  27706638 gtagagattgcctgtgaaaccgtaccgagtgtcacctcctctgaaactgaggaatacttggtatttgtactcataggaaattgaagtggaagagaaaggt 27706737  T
Q  108 gattgcatagccat 121  Q
    ||||||||||||||    
T  27706738 gattgcatagccat 27706751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 26622927 - 26622814
Alignment:
Q  8 gtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggt 107  Q
    ||||||||| || || ||||| |||||||||||||| ||||||||||| ||||| |||||||||||||||  ||||||||| |||||||||||| | |||    
T  26622927 gtagagatttccagtgaaaccgtaccgagtgtcactgcctctgaaacttaggaacacttggtatttgaattgataggaaattgaagaggaagaggatggt 26622828  T
Q  108 gattgcatagccat 121  Q
    ||||||||||||||    
T  26622827 gattgcatagccat 26622814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 26728905 - 26728792
Alignment:
Q  8 gtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggt 107  Q
    ||||||||| || || ||||| |||||||||||||| ||||||||||| ||||| |||||||||||||||  ||||||||| |||||||||||| | |||    
T  26728905 gtagagatttccagtgaaaccgtaccgagtgtcactgcctctgaaacttaggaacacttggtatttgaattgataggaaattgaagaggaagaggatggt 26728806  T
Q  108 gattgcatagccat 121  Q
    ||||||||||||||    
T  26728805 gattgcatagccat 26728792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 26884114 - 26884023
Alignment:
Q  8 gtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagaggaag 99  Q
    ||||||||| || || |||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||  ||||||||||    
T  26884114 gtagagatttccagtgaaaccataccgagtgtcacttcctctgaaactgaggaacacttggtaagtgaatccataggaaaatgaagaggaag 26884023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 27338301 - 27338432
Alignment:
Q  8 gtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggt 107  Q
    ||||||||||||||||||||| ||  |||||||| |  | || ||||||||||| || ||||||||||| ||| ||||||| |||||||||||| || ||    
T  27338301 gtagagattgccggtaaaaccgtaaagagtgtcaatgtccctaaaactgaggaacacatggtatttgaacccagaggaaattgaagaggaagaggaaagt 27338400  T
Q  108 gattgcatagccatcagaattgggataaataa 139  Q
    |||||||||||||| ||||||| || ||||||    
T  27338401 gattgcatagccatgagaattgagagaaataa 27338432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 27399041 - 27399172
Alignment:
Q  8 gtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggt 107  Q
    ||||||||||||||||||||| ||  |||||||| |  | || ||||||||||| || ||||||||||| ||| ||||||| |||||||||||| || ||    
T  27399041 gtagagattgccggtaaaaccgtaaagagtgtcaatgtccctaaaactgaggaacacatggtatttgaacccagaggaaattgaagaggaagaggaaagt 27399140  T
Q  108 gattgcatagccatcagaattgggataaataa 139  Q
    |||||||||||||| ||||||| || ||||||    
T  27399141 gattgcatagccatgagaattgagagaaataa 27399172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 129
Target Start/End: Complemental strand, 26655940 - 26655819
Alignment:
Q  8 gtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggt 107  Q
    ||||||||||||||||||||| | ||| |||||| | || || ||||||||||| ||||||||||| || ||||||||||  |||||||| ||| |||||    
T  26655940 gtagagattgccggtaaaaccgtgccgggtgtcaatgcccctaaaactgaggaacacttggtatttaaacccataggaaaatgaagaggatgaggaaggt 26655841  T
Q  108 gattgcatagccatcagaattg 129  Q
    ||||| |||||||| |||||||    
T  26655840 gattgtatagccatgagaattg 26655819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 129
Target Start/End: Complemental strand, 26761911 - 26761790
Alignment:
Q  8 gtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggt 107  Q
    ||||||||||||||||||||| | ||| |||||| | || || ||||||||||| ||||||||||| || ||||||||||  |||||||| ||| |||||    
T  26761911 gtagagattgccggtaaaaccgtgccgggtgtcaatgcccctaaaactgaggaacacttggtatttaaacccataggaaaatgaagaggatgaggaaggt 26761812  T
Q  108 gattgcatagccatcagaattg 129  Q
    ||||| |||||||| |||||||    
T  26761811 gattgtatagccatgagaattg 26761790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 27229183 - 27229070
Alignment:
Q  8 gtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggt 107  Q
    ||||||||||||||||||||| | |||||||||| | || || ||||| ||||| ||||||||  |||||||| ||||||  |||||||||||| |||||    
T  27229183 gtagagattgccggtaaaaccgtgccgagtgtcagtgcccctaaaactaaggaacacttggtaagtgaatccaaaggaaaatgaagaggaagaggaaggt 27229084  T
Q  108 gattgcatagccat 121  Q
    ||||| ||||||||    
T  27229083 gattgtatagccat 27229070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 8 - 129
Target Start/End: Complemental strand, 28786229 - 28786108
Alignment:
Q  8 gtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggt 107  Q
    ||||||||| ||||||||||| |  ||||||||| | || || ||||||||||| ||||||||  |||||||||||||||  |||||||| ||| |||||    
T  28786229 gtagagatttccggtaaaaccgtggcgagtgtcagtgcccctaaaactgaggaacacttggtaagtgaatccataggaaaatgaagaggatgaggaaggt 28786130  T
Q  108 gattgcatagccatcagaattg 129  Q
    ||||| |||||||| |||||||    
T  28786129 gattgtatagccataagaattg 28786108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 8 - 129
Target Start/End: Complemental strand, 28792350 - 28792229
Alignment:
Q  8 gtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggt 107  Q
    ||||||||| ||||||||||| |  ||||||||| | || || ||||||||||| ||||||||  |||||||||||||||  |||||||| ||| |||||    
T  28792350 gtagagatttccggtaaaaccgtggcgagtgtcagtgcccctaaaactgaggaacacttggtaagtgaatccataggaaaatgaagaggatgaggaaggt 28792251  T
Q  108 gattgcatagccatcagaattg 129  Q
    ||||| |||||||| |||||||    
T  28792250 gattgtatagccataagaattg 28792229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 27698730 - 27698860
Alignment:
Q  8 gtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggt 107  Q
    ||||||||| ||||||||||| | |||||||||| | || || ||||||| ||| ||||||||  |||||||||||||||  |||| ||| ||| |||||    
T  27698730 gtagagatttccggtaaaaccgtgccgagtgtcagtgcccctaaaactgatgaacacttggtaagtgaatccataggaaaatgaagtggatgaggaaggt 27698829  T
Q  108 gattgcatagccatcagaattgggataaata 138  Q
    ||||| |||||||| ||||||| || |||||    
T  27698830 gattgtatagccatgagaattgagagaaata 27698860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 27725081 - 27725211
Alignment:
Q  8 gtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggt 107  Q
    ||||||||| ||||||||||| | |||||||||| | || || ||||| ||||| ||||||||  |||||||||||||||  |||||||| ||| |||||    
T  27725081 gtagagatttccggtaaaaccgtgccgagtgtcagtgcccctaaaactaaggaacacttggtaagtgaatccataggaaaatgaagaggatgaggaaggt 27725180  T
Q  108 gattgcatagccatcagaattgggataaata 138  Q
    ||||| |||||||| | ||||| || |||||    
T  27725181 gattgtatagccatgacaattgagagaaata 27725211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 26802393 - 26802280
Alignment:
Q  8 gtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggt 107  Q
    |||||||||||| |||||||| |||||||||||| | || || ||||||||||| ||||||||  |||||||||| ||||  |||||||| ||| ||||     
T  26802393 gtagagattgcccgtaaaaccgtaccgagtgtcagtgcccctaaaactgaggaacacttggtaagtgaatccataagaaaatgaagaggatgaggaagga 26802294  T
Q  108 gattgcatagccat 121  Q
    || |||||||||||    
T  26802293 gactgcatagccat 26802280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 28781090 - 28780977
Alignment:
Q  8 gtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggt 107  Q
    ||||||||||||||||||||| |  ||||||||| | || || ||||||||||| ||||||||  ||||| || ||||||  |||||||||||| |||||    
T  28781090 gtagagattgccggtaaaaccgtggcgagtgtcagtgcccctaaaactgaggaacacttggtaagtgaatgcagaggaaaatgaagaggaagaggaaggt 28780991  T
Q  108 gattgcatagccat 121  Q
     |||||||||||||    
T  28780990 aattgcatagccat 28780977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 8 - 241
Target Start/End: Complemental strand, 26823791 - 26823571
Alignment:
Q  8 gtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggt 107  Q
    ||||||||||||||||||  ||||||||||||||   ||||| |||||||| || ||||||||||||||  |||| ||||  |||||||      ||| |    
T  26823791 gtagagattgccggtaaattcataccgagtgtcagcgcctctaaaactgagaaacacttggtatttgaaatcatatgaaactgaagagg------aagtt 26823698  T
Q  108 gattgcatagccatcagaattgggataaataattggatgagaaaaaatagtttgggaatgcaaactatgaacaaataagtaactgtggtctgtgaagtct 207  Q
    || ||||||||||| ||||||| || |   |||||||   ||| ||| |||||| ||||||| | ||||||  | || || |||||||| |||| |||||    
T  26823697 gactgcatagccatgagaattgagaga---aattgga--cgaagaaagagtttgagaatgcagaatatgaatgagtatgttactgtggtgtgtggagtct 26823603  T
Q  208 ctaatatatgtaactataaaaggagaaatcttat 241  Q
    |||  ||||||||||||||||||||||| |||||    
T  26823602 cta--atatgtaactataaaaggagaaaccttat 26823571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 27718615 - 27718745
Alignment:
Q  8 gtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggt 107  Q
    ||||||||| ||||||||||  | |||||||||| | || || ||||||||||| ||||||||  ||||||||| ||| |  |||||||| ||| |||||    
T  27718615 gtagagatttccggtaaaactgtgccgagtgtcagtgcccctaaaactgaggaacacttggtaagtgaatccatgggagaatgaagaggatgaggaaggt 27718714  T
Q  108 gattgcatagccatcagaattgggataaata 138  Q
    ||||| |||||||| ||||||| || |||||    
T  27718715 gattgtatagccatgagaattgagagaaata 27718745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 27611238 - 27611351
Alignment:
Q  8 gtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggt 107  Q
    ||||||||| ||||||||||| |  ||||||||| | || || ||||||||||| ||||||||  |||||||||||||||  ||||| |||||| ||| |    
T  27611238 gtagagatttccggtaaaaccgtggcgagtgtcagtgcccctaaaactgaggaacacttggtaagtgaatccataggaaaatgaagaagaagaggaagct 27611337  T
Q  108 gattgcatagccat 121  Q
     |||||||||||||    
T  27611338 aattgcatagccat 27611351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 27604941 - 27605030
Alignment:
Q  8 gtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagagga 97  Q
    ||||||||||||||||||||| || ||||||||| | || || ||||| ||||| ||||||||  ||||| |||||||||  ||||||||    
T  27604941 gtagagattgccggtaaaaccgtatcgagtgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaaatgaagagga 27605030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 28325432 - 28325343
Alignment:
Q  8 gtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagagga 97  Q
    ||||||||| || ||||||||||| ||||||||||| ||||| ||||| ||||| || |  ||  ||||||||||||||| |||||||||    
T  28325432 gtagagatttccagtaaaaccataacgagtgtcactacctctaaaactaaggaacacgtcataggtgaatccataggaaaaggaagagga 28325343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 121
Target Start/End: Original strand, 26018770 - 26018836
Alignment:
Q  55 tgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccat 121  Q
    ||||||| ||||||||| ||| ||||||||||| ||| |||| |||  |||||||||| ||||||||    
T  26018770 tgaggaacacttggtatgtgagtccataggaaaaggatgaggtagacgaaggtgattgaatagccat 26018836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 121
Target Start/End: Original strand, 26139474 - 26139540
Alignment:
Q  55 tgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccat 121  Q
    ||||||| ||||||||| ||| ||||||||||| ||| |||| |||| |||||||||| ||| ||||    
T  26139474 tgaggaacacttggtatgtgagtccataggaaaaggatgaggtagaggaaggtgattgaataaccat 26139540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 2184235 - 2184186
Alignment:
Q  12 agattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaa 61  Q
    |||||||||||||||||||  |||||||||  |||||||||||| |||||    
T  2184235 agattgccggtaaaaccatggcgagtgtcagctcctctgaaacttaggaa 2184186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 28242755 - 28242702
Alignment:
Q  8 gtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaa 61  Q
    ||||||||| || ||||||||||| ||||||||||| ||||| ||||| |||||    
T  28242755 gtagagatttccagtaaaaccataacgagtgtcactacctctaaaactaaggaa 28242702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 28234514 - 28234462
Alignment:
Q  9 tagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaa 61  Q
    ||||||||  ||||||||||||| ||||||||||| ||||| ||||| |||||    
T  28234514 tagagattttcggtaaaaccatagcgagtgtcactacctctaaaactaaggaa 28234462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 8 - 129
Target Start/End: Original strand, 4907 - 5028
Alignment:
Q  8 gtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggt 107  Q
    ||||||||| ||||||||||| |  ||||||||| | || || ||||||||||| ||||||||  |||||||||||||||  |||||||| ||| |||||    
T  4907 gtagagatttccggtaaaaccgtggcgagtgtcaatgcccctaaaactgaggaacacttggtaagtgaatccataggaaaatgaagaggatgaggaaggt 5006  T
Q  108 gattgcatagccatcagaattg 129  Q
    ||||| |||||||| |||||||    
T  5007 gattgtatagccataagaattg 5028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 13868 - 13981
Alignment:
Q  8 gtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggt 107  Q
    ||||||||||||||||||||| |  ||||||||| | || || ||||||||||| ||||||||  ||||| || ||||||  |||||||||||| |||||    
T  13868 gtagagattgccggtaaaaccgtggcgagtgtcagtgcccctaaaactgaggaacacttggtaagtgaatgcagaggaaaatgaagaggaagaggaaggt 13967  T
Q  108 gattgcatagccat 121  Q
     |||||||||||||    
T  13968 aattgcatagccat 13981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 51; Significance: 3e-20; HSPs: 3)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 3658 - 3788
Alignment:
Q  8 gtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggt 107  Q
    ||||||||| ||||||||||| | |||||||||| | || || ||||| ||||| ||||||||  |||||||||||||||  |||||||| ||| |||||    
T  3658 gtagagatttccggtaaaaccgtgccgagtgtcagtgcccctaaaactaaggaacacttggtaagtgaatccataggaaaatgaagaggatgaggaaggt 3757  T
Q  108 gattgcatagccatcagaattgggataaata 138  Q
    ||||| |||||||| | ||||| || |||||    
T  3758 gattgtatagccatgacaattgagagaaata 3788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 14591 - 14721
Alignment:
Q  8 gtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggt 107  Q
    ||||||||| ||||||||||| | |||||||||| | || || ||||||| ||| ||||||||  |||||||||||||||  |||| ||| ||| |||||    
T  14591 gtagagatttccggtaaaaccgtgccgagtgtcagtgcccctaaaactgatgaacacttggtaagtgaatccataggaaaatgaagtggatgaggaaggt 14690  T
Q  108 gattgcatagccatcagaattgggataaata 138  Q
    ||||| |||||||| ||||||| || |||||    
T  14691 gattgtatagccatgagaattgagagaaata 14721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 32 - 138
Target Start/End: Original strand, 8061 - 8167
Alignment:
Q  32 ccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccatcagaattggg 131  Q
    |||||||||| | || || ||||||||||| ||||||||  ||||||||| ||| |  |||||||| ||| |||||||||| |||||||| ||||||| |    
T  8061 ccgagtgtcagtgcccctaaaactgaggaacacttggtaagtgaatccatgggagaatgaagaggatgaggaaggtgattgtatagccatgagaattgag 8160  T
Q  132 ataaata 138  Q
    | |||||    
T  8161 agaaata 8167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1254 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 129
Target Start/End: Original strand, 153 - 274
Alignment:
Q  8 gtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggt 107  Q
    ||||||||||||||||||||| |  ||||||||| | || || ||||| ||||| ||||||||  ||||| |||| ||||  ||||||||||||  ||||    
T  153 gtagagattgccggtaaaaccgtggcgagtgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcatatgaaaatgaagaggaagagggaggt 252  T
Q  108 gattgcatagccatcagaattg 129  Q
    |||||||||||||| |||||||    
T  253 gattgcatagccatgagaattg 274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 129
Target Start/End: Complemental strand, 7476 - 7355
Alignment:
Q  8 gtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggt 107  Q
    ||||||||||||||||||||| |  ||||||||| | || || ||||| ||||| ||||||||  ||||| |||| ||||  ||||||||||||  ||||    
T  7476 gtagagattgccggtaaaaccgtggcgagtgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcatatgaaaatgaagaggaagagggaggt 7377  T
Q  108 gattgcatagccatcagaattg 129  Q
    |||||||||||||| |||||||    
T  7376 gattgcatagccatgagaattg 7355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 1e-19; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 129
Target Start/End: Original strand, 18699623 - 18699744
Alignment:
Q  8 gtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggt 107  Q
    |||||||| ||| |||||||| |  ||||||||| | || ||||| |||||||| ||||||||  |||||| ||||||||  |||||||| ||| |||||    
T  18699623 gtagagatggccagtaaaaccgtcacgagtgtcagtgcccctgaagctgaggaacacttggtaagtgaatcgataggaaaatgaagaggatgaggaaggt 18699722  T
Q  108 gattgcatagccatcagaattg 129  Q
    |||||||||||||| |||||||    
T  18699723 gattgcatagccatgagaattg 18699744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 129
Target Start/End: Original strand, 18724308 - 18724429
Alignment:
Q  8 gtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggt 107  Q
    ||||||||  || |||||||| |  ||||||||||| || ||||| |||||||| ||||||||  |||||| ||||||||  |||||||| ||| |||||    
T  18724308 gtagagatgaccagtaaaaccgttacgagtgtcactgcccctgaagctgaggaacacttggtaagtgaatcgataggaaaatgaagaggatgaggaaggt 18724407  T
Q  108 gattgcatagccatcagaattg 129  Q
    |||||||||||||| |||||||    
T  18724408 gattgcatagccatgagaattg 18724429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 18731727 - 18731840
Alignment:
Q  8 gtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggt 107  Q
    |||||||| ||| |||||||| |  ||||||||||| || ||||| |||||||| ||||||||  |||||| ||||||||  |||||||| ||| |||||    
T  18731727 gtagagatggccagtaaaaccgtcacgagtgtcactgcccctgaagctgaggaacacttggtaagtgaatcgataggaaaatgaagaggatgaggaaggt 18731826  T
Q  108 gattgcatagccat 121  Q
    ||||||||||||||    
T  18731827 gattgcatagccat 18731840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 18655700 - 18655813
Alignment:
Q  8 gtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggt 107  Q
    ||||||||  || |||||||| |  ||||||||||| || ||||| |||||||| ||||||||  |||||| ||||||||  |||||||| ||| |||||    
T  18655700 gtagagatgcccagtaaaaccgttacgagtgtcactgcccctgaagctgaggaacacttggtaagtgaatcgataggaaaatgaagaggatgaggaaggt 18655799  T
Q  108 gattgcatagccat 121  Q
    |||||| |||||||    
T  18655800 gattgcctagccat 18655813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 18679790 - 18679903
Alignment:
Q  8 gtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggt 107  Q
    ||||||||  || |||||||| |  ||||||||||| || ||||| |||||||| ||||||||  |||||| ||||||||  |||||| | ||| |||||    
T  18679790 gtagagatgaccagtaaaaccgttacgagtgtcactgcccctgaagctgaggaacacttggtaagtgaatcgataggaaaatgaagagaatgaggaaggt 18679889  T
Q  108 gattgcatagccat 121  Q
    ||||||||||||||    
T  18679890 gattgcatagccat 18679903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 5e-19; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 33 - 129
Target Start/End: Original strand, 28164610 - 28164706
Alignment:
Q  33 cgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccatcagaattg 129  Q
    ||||||||||| || || ||||||||||| ||||||||| |||||||||||||||| |||||||||||| || | ||| | |||||||| |||||||    
T  28164610 cgagtgtcactgcccctaaaactgaggaacacttggtatgtgaatccataggaaattgaagaggaagaggaatgcgatcgtatagccatgagaattg 28164706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 28127903 - 28127993
Alignment:
Q  8 gtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagaggaa 98  Q
    |||||||| ||| || ||||| |  ||||||||||| || ||||| |||||||| ||||||||| |||||||||||||||| |||||||||    
T  28127903 gtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaagctgaggaacacttggtatgtgaatccataggaaattgaagaggaa 28127993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 268580 - 268698
Alignment:
Q  8 gtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggt 107  Q
    |||||||| |||  ||||||| |  ||||||||||  ||||||||  ||||||| || |||||    |||||||| || || |||||||||||| |||||    
T  268580 gtagagatggccaataaaaccctcacgagtgtcaccgcctctgaagttgaggaagacctggtaggcaaatccatatgagattgaagaggaagaggaaggt 268679  T
Q  108 gattgcatagccatcagaa 126  Q
    |||||||||||||| ||||    
T  268680 gattgcatagccatgagaa 268698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 116747 - 116658
Alignment:
Q  8 gtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagagga 97  Q
    ||||||||| || ||||||||||| ||||||||||| ||||| ||||| ||||| || |  ||  ||||||||||||||| |||||||||    
T  116747 gtagagatttccagtaaaaccataacgagtgtcactacctctaaaactaaggaacacgtcataggtgaatccataggaaaaggaagagga 116658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 42917 - 42864
Alignment:
Q  8 gtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaa 61  Q
    ||||||||| || ||||||||||| ||||||||||| ||||| ||||| |||||    
T  42917 gtagagatttccagtaaaaccataacgagtgtcactacctctaaaactaaggaa 42864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 34675 - 34623
Alignment:
Q  9 tagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaa 61  Q
    ||||||||  ||||||||||||| ||||||||||| ||||| ||||| |||||    
T  34675 tagagattttcggtaaaaccatagcgagtgtcactacctctaaaactaaggaa 34623  T

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Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 29274006 - 29274119
Alignment:
Q  8 gtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggt 107  Q
    |||||||| |||  ||||||| |  ||||||||||  ||||| ||  ||||||| || |||||  |||||||||| || || |||||||||||| |||||    
T  29274006 gtagagatggccaataaaaccgtcacgagtgtcaccgcctctaaagttgaggaagacctggtaagtgaatccatatgagattgaagaggaagaggaaggt 29274105  T
Q  108 gattgcatagccat 121  Q
    ||||||||||||||    
T  29274106 gattgcatagccat 29274119  T

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Target: scaffold0713 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0713
Description:

Target: scaffold0713; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 121
Target Start/End: Complemental strand, 5982 - 5916
Alignment:
Q  55 tgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccat 121  Q
    ||||||| ||||||||| ||| ||||||||||| ||| |||| |||| |||||||||| ||| ||||    
T  5982 tgaggaacacttggtatgtgagtccataggaaaaggatgaggtagaggaaggtgattgaataaccat 5916  T

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Target: scaffold0781 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0781
Description:

Target: scaffold0781; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 91 - 140
Alignment:
Q  12 agattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaa 61  Q
    |||||||||||||||||||  |||||||||  |||||||||||| |||||    
T  91 agattgccggtaaaaccatggcgagtgtcagctcctctgaaacttaggaa 140  T

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Target: scaffold0019 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 58518 - 58607
Alignment:
Q  8 gtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagagga 97  Q
    ||||||||| || ||||||||||| ||||||||||  ||||| || || ||||| || || ||  ||||||||||||| | |||||||||    
T  58518 gtagagatttccagtaaaaccatagcgagtgtcacaacctctaaagctaaggaacacgtgataggtgaatccataggagaaggaagagga 58607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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