View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0752-Insertion-2 (Length: 1137)
Name: NF0752-Insertion-2
Description: NF0752
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0752-Insertion-2 |
 | |
|
| [»] scaffold0294 (1 HSPs) |
| | |
|
| [»] scaffold0373 (1 HSPs) |
| | |
|
| [»] scaffold0552 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 274; Significance: 1e-152; HSPs: 27)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 274; E-Value: 1e-152
Query Start/End: Original strand, 18 - 484
Target Start/End: Complemental strand, 5434116 - 5433658
Alignment:
| Q |
18 |
ttattgcagtgttatctgcaagcagggtggttaaggattccatttgatcctagtccttttccaacttgtcgatatttaaacaaccagaaagaatgagagt |
117 |
Q |
| |
|
||||||||||||||| ||||||||| |||||||| |||||||| || ||| |||| | |||||| ||||| || |||||||| |||| ||| |||||||| |
|
|
| T |
5434116 |
ttattgcagtgttatttgcaagcagagtggttaaagattccatatgttccaagtcatcttccaaattgtcaatctttaaacagccagtaaggatgagagt |
5434017 |
T |
|
| Q |
118 |
tttcaaagattttaacttatatatgcttcttgggaggttatgtaggccaatacaatcttccaaatttatcagaagaattttgttgagatgtccaatgcta |
217 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |
|
|
| T |
5434016 |
tttcaaagatttcaacttatatatgcttcttgggaggttacataggccaatacaatcttccaaatttatcagaagaatttcattgagatggccaatgcta |
5433917 |
T |
|
| Q |
218 |
ggagaaatctcggaaagacttggacaatctaagagtactagcttttcaagattaggcaaatttgaaaagtcaggggtttgtgtcagaaaatgacagtgac |
317 |
Q |
| |
|
||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| || |||||||||||| ||||||| |||| |
|
|
| T |
5433916 |
ggagaaatctcagaaagacttggacaatctgtgagtactaacttttcaagattaggcaaatttgaaaagtctggtgtttgtgtcagataatgacaatgac |
5433817 |
T |
|
| Q |
318 |
taagtttaagaattttcagcttctccatcctctgcaagaacatatacattaaagagaagacatagggaagaagctttaaataataaacgaatgcaactac |
417 |
Q |
| |
|
|||| ||||||||||||||||||||||| ||||||||||||| | | || ||||||||||||||||||| |||| |||||||||||||||| |||||||| |
|
|
| T |
5433816 |
taaggttaagaattttcagcttctccattctctgcaagaacacaaaaataaaagagaagacatagggaataagcattaaataataaacgaaagcaactac |
5433717 |
T |
|
| Q |
418 |
tatgtatcactaaccttaaacgttgaaagtaatatatttacattagatttgtctctatttatttcta |
484 |
Q |
| |
|
||||||||||||||||| ||||||| | ||||||||||||||||| | |||||||||||| |
|
|
| T |
5433716 |
tatgtatcactaacctt--------aaagtaagacatttacattagatttgtatttatttatttcta |
5433658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 237; E-Value: 1e-130
Query Start/End: Original strand, 590 - 834
Target Start/End: Complemental strand, 5444543 - 5444299
Alignment:
| Q |
590 |
tagtccttaaattatatcgcttactagcaaattagtccatacaagttaagagaaagaccaagctgcaagttgcttggtgtcattcaaactctgggccttt |
689 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
5444543 |
tagtccttaaattatatcgcttactagcaaattagtccatacaagttaagagaaagaccaagctgcaagttgcttggtgtcattgaaactctgggccttt |
5444444 |
T |
|
| Q |
690 |
ttggcctacttgaaaatctgaaaagaagtagttgttgaatgaaattacccggacttcactattggaaaccctgcgatgtttgctgcctcacgaagagcct |
789 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5444443 |
ttggcctacttgaaaatctgaaaagaagtagttgttgaatgaaattacccggacttcactattggaaaccctgcgatgtttgctgcctcacgaagagcct |
5444344 |
T |
|
| Q |
790 |
ttttccaacttagcaccaatttctccttgtttggaactttcttca |
834 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
5444343 |
ttttccaacttagcaccaatttctccttttttggaactttcttca |
5444299 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 179; E-Value: 5e-96
Query Start/End: Original strand, 18 - 360
Target Start/End: Original strand, 5128417 - 5128759
Alignment:
| Q |
18 |
ttattgcagtgttatctgcaagcagggtggttaaggattccatttgatcctagtccttttccaacttgtcgatatttaaacaaccagaaagaatgagagt |
117 |
Q |
| |
|
||||||||||||||| ||||||||| || ||||| ||||||||||| ||| |||||| |||||||||||| || ||| ||||||||||||||||||||| |
|
|
| T |
5128417 |
ttattgcagtgttatttgcaagcagagttgttaatgattccatttgttccaagtcctcttccaacttgtcaatcattatacaaccagaaagaatgagagt |
5128516 |
T |
|
| Q |
118 |
tttcaaagattttaacttatatatgcttcttgggaggttatgtaggccaatacaatcttccaaatttatcagaagaattttgttgagatgtccaatgcta |
217 |
Q |
| |
|
|||||||||||| |||||||| ||||||||||||||| || ||||| ||| ||||||||||||||||||||||||||||| ||||||||||| |||||| |
|
|
| T |
5128517 |
tttcaaagatttcaacttatagatgcttcttgggaggctacataggctaatgcaatcttccaaatttatcagaagaattttattgagatgtccgatgcta |
5128616 |
T |
|
| Q |
218 |
ggagaaatctcggaaagacttggacaatctaagagtactagcttttcaagattaggcaaatttgaaaagtcaggggtttgtgtcagaaaatgacagtgac |
317 |
Q |
| |
|
| ||||| ||| || | ||| ||||||| |||||||||||||||||||||||| |||| ||||||||| ||||| ||||||||| ||||| | |||| |
|
|
| T |
5128617 |
gtagaaacctcagacaacattgaacaatctttgagtactagcttttcaagattaggtaaatatgaaaagtctggggtgtgtgtcagacaatgagaatgac |
5128716 |
T |
|
| Q |
318 |
taagtttaagaattttcagcttctccatcctctgcaagaacat |
360 |
Q |
| |
|
|| | || ||||||||||||||||||||| ||||||||||||| |
|
|
| T |
5128717 |
tatgattgagaattttcagcttctccatcatctgcaagaacat |
5128759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 179; E-Value: 5e-96
Query Start/End: Original strand, 17 - 359
Target Start/End: Complemental strand, 5447669 - 5447327
Alignment:
| Q |
17 |
gttattgcagtgttatctgcaagcagggtggttaaggattccatttgatcctagtccttttccaacttgtcgatatttaaacaaccagaaagaatgagag |
116 |
Q |
| |
|
||||||| ||| |||| ||||||||| |||||||| |||||||| || ||| |||||| ||||| |||||| || ||||||||||||||||||||||||| |
|
|
| T |
5447669 |
gttattgaagtattatttgcaagcagagtggttaaagattccatctgttccaagtcctcttccagcttgtcaatctttaaacaaccagaaagaatgagag |
5447570 |
T |
|
| Q |
117 |
ttttcaaagattttaacttatatatgcttcttgggaggttatgtaggccaatacaatcttccaaatttatcagaagaattttgttgagatgtccaatgct |
216 |
Q |
| |
|
||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
5447569 |
ttttcaaagatttcaacttatagatgcttcttgggaggttacctaggccaatacaatcttccaaatttatcagaagaattttattgagatgtccaatgct |
5447470 |
T |
|
| Q |
217 |
aggagaaatctcggaaagacttggacaatctaagagtactagcttttcaagattaggcaaatttgaaaagtcaggggtttgtgtcagaaaatgacagtga |
316 |
Q |
| |
|
|||||||| ||| || | ||||||||||| ||||||||||||||||||||||||||| ||||||||| ||| | | ||||||| |||| | ||| |
|
|
| T |
5447469 |
aggagaaacctcagacaacattggacaatctttgagtactagcttttcaagattaggcaagcatgaaaagtccgggatgtttgtcagacgatgagaatga |
5447370 |
T |
|
| Q |
317 |
ctaagtttaagaattttcagcttctccatcctctgcaagaaca |
359 |
Q |
| |
|
||||| || ||| ||||||| || ||||||||||||||||||| |
|
|
| T |
5447369 |
ctaagattgagatttttcagattttccatcctctgcaagaaca |
5447327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 159; E-Value: 4e-84
Query Start/End: Original strand, 17 - 383
Target Start/End: Complemental strand, 5278648 - 5278282
Alignment:
| Q |
17 |
gttattgcagtgttatctgcaagcagggtggttaaggattccatttgatcctagtccttttccaacttgtcgatatttaaacaaccagaaagaatgagag |
116 |
Q |
| |
|
|||||||||||||||| ||||||||| || ||||| ||||||||||| ||| |||||| |||||||||||| || | |||| |||||||||||||| | |
|
|
| T |
5278648 |
gttattgcagtgttatttgcaagcagagtagttaaagattccatttgttccaagtcctcttccaacttgtcaatcatcgaacacccagaaagaatgagtg |
5278549 |
T |
|
| Q |
117 |
ttttcaaagattttaacttatatatgcttcttgggaggttatgtaggccaatacaatcttccaaatttatcagaagaattttgttgagatgtccaatgct |
216 |
Q |
| |
|
||||||||||||| |||||||| || |||||||| || | || |||| ||||||||||||||| ||||||||||||||||| | ||||| ||||||||| |
|
|
| T |
5278548 |
ttttcaaagatttcaacttatagatacttcttggaagactctgaaggctaatacaatcttccaagtttatcagaagaattttatcgagatatccaatgct |
5278449 |
T |
|
| Q |
217 |
aggagaaatctcggaaagacttggacaatctaagagtactagcttttcaagattaggcaaatttgaaaagtcaggggtttgtgtcagaaaatgacagtga |
316 |
Q |
| |
|
| |||||| ||| | | ||||| ||||||| ||||| ||||||||||||||||||| ||||||||||| ||||| | ||||||| ||||| | ||| |
|
|
| T |
5278448 |
atgagaaacctcacacaaccttgggcaatctatgagtataagcttttcaagattaggcatgtttgaaaagtctggggtctctgtcagataatgagaatga |
5278349 |
T |
|
| Q |
317 |
ctaagtttaagaattttcagcttctccatcctctgcaagaacatatacattaaagagaagacatagg |
383 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||| | | |||||| ||||||| |||| |
|
|
| T |
5278348 |
ctaagattaagaattttcagcttctccatcctctgcaagaacaaaaatattaaatagaagacttagg |
5278282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 157; E-Value: 7e-83
Query Start/End: Original strand, 17 - 361
Target Start/End: Complemental strand, 5383408 - 5383064
Alignment:
| Q |
17 |
gttattgcagtgttatctgcaagcagggtggttaaggattccatttgatcctagtccttttccaacttgtcgatatttaaacaaccagaaagaatgagag |
116 |
Q |
| |
|
||||||||||||||||||||||||| || ||||| ||||||||||| || ||||| |||||||||| || ||||||||||||||||||||||||| |
|
|
| T |
5383408 |
gttattgcagtgttatctgcaagcaaagtagttaaagattccatttgttctatgtcctcttccaacttggtaatctttaaacaaccagaaagaatgagag |
5383309 |
T |
|
| Q |
117 |
ttttcaaagattttaacttatatatgcttcttgggaggttatgtaggccaatacaatcttccaaatttatcagaagaattttgttgagatgtccaatgct |
216 |
Q |
| |
|
|||||| |||||| |||||||| ||||||||||||||| || ||||| || ||| ||||||||||| |||||||||||||| ||||||| ||||||||| |
|
|
| T |
5383308 |
ttttcagagatttcaacttataaatgcttcttgggaggctacataggctaacacagtcttccaaattaatcagaagaattttcttgagatctccaatgct |
5383209 |
T |
|
| Q |
217 |
aggagaaatctcggaaagacttggacaatctaagagtactagcttttcaagattaggcaaatttgaaaagtcaggggtttgtgtcagaaaatgacagtga |
316 |
Q |
| |
|
|||||||| |||||| | || ||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||| || ||| ||||| | ||| |
|
|
| T |
5383208 |
aggagaaacctcggacaacctcggacaatctgcgagtactagcttttcaagattaggcaaatttgagaagtctggggtctgcaccaggtaatgagaatga |
5383109 |
T |
|
| Q |
317 |
ctaagtttaagaattttcagcttctccatcctctgcaagaacata |
361 |
Q |
| |
|
||||| || || |||||||| ||||||||||||||||||||||| |
|
|
| T |
5383108 |
ctaaggtttaggattttcagtatctccatcctctgcaagaacata |
5383064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 156; E-Value: 3e-82
Query Start/End: Original strand, 17 - 404
Target Start/End: Original strand, 5690158 - 5690544
Alignment:
| Q |
17 |
gttattgcagtgttatctgcaagcagggtggttaaggattccatttgatcctagtccttttccaacttgtcgatatttaaacaaccagaaagaatgagag |
116 |
Q |
| |
|
|||||| |||||| || ||||||||| |||||||| ||||||||||| ||| |||||| ||||||||||| || || |||| || ||||||||||||| |
|
|
| T |
5690158 |
gttattccagtgtcatttgcaagcagagtggttaaagattccatttgttccaagtcctcttccaacttgttaatcattgaacacccggaaagaatgagag |
5690257 |
T |
|
| Q |
117 |
ttttcaaagattttaacttatatatgcttcttgggaggttatgtaggccaatacaatcttccaaatttatcagaagaattttgttgagatgtccaatgct |
216 |
Q |
| |
|
|||||| |||||| |||||||| ||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
5690258 |
ttttcagagatttcaacttatagatgcttcttggaaggttagaaaggctaatacaatcttccaaatttatcagaagaattttgtcgagatgtccaatgct |
5690357 |
T |
|
| Q |
217 |
aggagaaatctcggaaagacttggacaatctaagagtactagcttttcaagattaggcaaatttgaaaagtcaggggtttgtgtcagaaaatgacagtga |
316 |
Q |
| |
|
| | |||| ||| | |||||||||||| ||||| |||||||||||||||||||| |||||||||| ||||| ||||||||| ||||| ||||| |
|
|
| T |
5690358 |
atgggaaacctcacgcaaccttggacaatctttgagtattagcttttcaagattaggcatgattgaaaagtctggggtctgtgtcagataatgagagtga |
5690457 |
T |
|
| Q |
317 |
ctaagtttaagaattttcagcttctccatcctctgcaagaacatatacattaaagagaagacatagggaagaagctttaaataataaa |
404 |
Q |
| |
|
||||| || |||||||| |||||||||||| ||| |||||| ||| | ||||||||||| || || | ||||||||| ||| |||||| |
|
|
| T |
5690458 |
ctaagattgagaattttaagcttctccatcatctacaagaatataaatattaaagagaa-acttatgtaagaagcttcaaaaaataaa |
5690544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 155; E-Value: 1e-81
Query Start/End: Original strand, 17 - 383
Target Start/End: Complemental strand, 5176821 - 5176455
Alignment:
| Q |
17 |
gttattgcagtgttatctgcaagcagggtggttaaggattccatttgatcctagtccttttccaacttgtcgatatttaaacaaccagaaagaatgagag |
116 |
Q |
| |
|
|||||||||||||||| ||||||||| || ||||| ||||||||||| ||| |||||| |||||||||||| || | |||| |||||||||||||| | |
|
|
| T |
5176821 |
gttattgcagtgttatttgcaagcagagtagttaaagattccatttgttccaagtcctcttccaacttgtcaatcatcgaacacccagaaagaatgagtg |
5176722 |
T |
|
| Q |
117 |
ttttcaaagattttaacttatatatgcttcttgggaggttatgtaggccaatacaatcttccaaatttatcagaagaattttgttgagatgtccaatgct |
216 |
Q |
| |
|
||||||||||||| |||||||| || |||||||| || | || |||| ||||||||||||||| ||||||||||||||||| | ||||||||||||||| |
|
|
| T |
5176721 |
ttttcaaagatttcaacttatagatacttcttggaagactctgaaggctaatacaatcttccaagtttatcagaagaattttatcgagatgtccaatgct |
5176622 |
T |
|
| Q |
217 |
aggagaaatctcggaaagacttggacaatctaagagtactagcttttcaagattaggcaaatttgaaaagtcaggggtttgtgtcagaaaatgacagtga |
316 |
Q |
| |
|
| | |||| ||| | ||||| ||||||| ||||| ||||||||||||||||||| ||||||||||| ||||| | ||||||| ||||| | ||| |
|
|
| T |
5176621 |
atgggaaacctcacgcaaccttgggcaatctatgagtataagcttttcaagattaggcatgtttgaaaagtctggggtctctgtcagataatgagaatga |
5176522 |
T |
|
| Q |
317 |
ctaagtttaagaattttcagcttctccatcctctgcaagaacatatacattaaagagaagacatagg |
383 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||| | | |||||| ||||||| |||| |
|
|
| T |
5176521 |
ctaagattaagaattttcagcttctccatcctctgcaagaacaaaaatattaaatagaagacttagg |
5176455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 147; E-Value: 6e-77
Query Start/End: Original strand, 17 - 375
Target Start/End: Original strand, 5354613 - 5354971
Alignment:
| Q |
17 |
gttattgcagtgttatctgcaagcagggtggttaaggattccatttgatcctagtccttttccaacttgtcgatatttaaacaaccagaaagaatgagag |
116 |
Q |
| |
|
||||||||||||| || |||||||||||||||||| ||||||| ||| ||| |||||| |||||||||||| | ||| |||||||||||||||||||| |
|
|
| T |
5354613 |
gttattgcagtgtcatttgcaagcagggtggttaaagattccaattgttccaagtcctcttccaacttgtctaactttttacaaccagaaagaatgagag |
5354712 |
T |
|
| Q |
117 |
ttttcaaagattttaacttatatatgcttcttgggaggttatgtaggccaatacaatcttccaaatttatcagaagaattttgttgagatgtccaatgct |
216 |
Q |
| |
|
||||||||||||| ||||| || ||||||||||||||| || ||| ||| || |||| |||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
5354713 |
ttttcaaagatttcaacttgtagatgcttcttgggaggctagaaaggttaatgcagtctttgaaatttatcagaagaattttattgagatgtccaatgct |
5354812 |
T |
|
| Q |
217 |
aggagaaatctcggaaagacttggacaatctaagagtactagcttttcaagattaggcaaatttgaaaagtcaggggtttgtgtcagaaaatgacagtga |
316 |
Q |
| |
|
||||||| || || | ||||||||||| |||||| ||||||||||||||||||| | |||||||||||||| ||||||||| |||| | ||| |
|
|
| T |
5354813 |
tggagaaacttcagataacattggacaatctttgagtacaagcttttcaagattaggcatgtaagaaaagtcaggggtatgtgtcagacaatgtgaatga |
5354912 |
T |
|
| Q |
317 |
ctaagtttaagaattttcagcttctccatcctctgcaagaacatatacattaaagagaa |
375 |
Q |
| |
|
||||| || ||||||||||| | |||||| ||||||||||||||| | ||||||||||| |
|
|
| T |
5354913 |
ctaagattgagaattttcagatgctccattctctgcaagaacatacatattaaagagaa |
5354971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 17 - 361
Target Start/End: Complemental strand, 5344943 - 5344599
Alignment:
| Q |
17 |
gttattgcagtgttatctgcaagcagggtggttaaggattccatttgatcctagtccttttccaacttgtcgatatttaaacaaccagaaagaatgagag |
116 |
Q |
| |
|
|||||||||||||||| ||| | ||| ||||||| |||| |||||| || |||||| |||||||||||| || ||||||||||| ||||||||||||| |
|
|
| T |
5344943 |
gttattgcagtgttatttgcgatcagaatggttaaagatttcatttgttctaagtcctcttccaacttgtcaatctttaaacaacccgaaagaatgagag |
5344844 |
T |
|
| Q |
117 |
ttttcaaagattttaacttatatatgcttcttgggaggttatgtaggccaatacaatcttccaaatttatcagaagaattttgttgagatgtccaatgct |
216 |
Q |
| |
|
|||| | ||| || |||||||| ||||||||||| ||| || ||||| |||||| ||||||||||| || ||||||||||| ||||||| ||||||||| |
|
|
| T |
5344843 |
tttttagagaattcaacttatagatgcttcttggcaggctacataggctaatacagtcttccaaattaatgagaagaattttcttgagatctccaatgct |
5344744 |
T |
|
| Q |
217 |
aggagaaatctcggaaagacttggacaatctaagagtactagcttttcaagattaggcaaatttgaaaagtcaggggtttgtgtcagaaaatgacagtga |
316 |
Q |
| |
|
| |||||||||| | | |||||||||||| | |||||||| ||||||||||||||| || | |||||||| ||||||||| |||| ||||| | ||| |
|
|
| T |
5344743 |
atgagaaatctcacacaaacttggacaatccacgagtactaacttttcaagattaggtaagtaagaaaagtccggggtttgtatcaggtaatgagaatga |
5344644 |
T |
|
| Q |
317 |
ctaagtttaagaattttcagcttctccatcctctgcaagaacata |
361 |
Q |
| |
|
||||| || ||||||||||||||||||||| |||| ||||||||| |
|
|
| T |
5344643 |
ctaagattgagaattttcagcttctccatcatctgtaagaacata |
5344599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 130; E-Value: 9e-67
Query Start/End: Original strand, 18 - 359
Target Start/End: Original strand, 5066694 - 5067035
Alignment:
| Q |
18 |
ttattgcagtgttatctgcaagcagggtggttaaggattccatttgatcctagtccttttccaacttgtcgatatttaaacaaccagaaagaatgagagt |
117 |
Q |
| |
|
|||||||||| |||| ||||||||| |||||||| ||||||||||| || ||||| ||| |||||||| || ||| ||| ||||||||||||||||| |
|
|
| T |
5066694 |
ttattgcagttttatgtgcaagcagagtggttaaagattccatttgttctatgtcctcttctaacttgtcaatcattatacacccagaaagaatgagagt |
5066793 |
T |
|
| Q |
118 |
tttcaaagattttaacttatatatgcttcttgggaggttatgtaggccaatacaatcttccaaatttatcagaagaattttgttgagatgtccaatgcta |
217 |
Q |
| |
|
||| | |||||| |||||||| ||||||||||| |||||| | |||| || |||||||||||||| ||| |||||||||| |||| | ||| || || |
|
|
| T |
5066794 |
tttaagagatttcaacttatagatgcttcttggaaggttacgaaggctaacacaatcttccaaatctattagaagaatttcactgagttttcctattgta |
5066893 |
T |
|
| Q |
218 |
ggagaaatctcggaaagacttggacaatctaagagtactagcttttcaagattaggcaaatttgaaaagtcaggggtttgtgtcagaaaatgacagtgac |
317 |
Q |
| |
|
||||||| |||||| | ||||||||||| |||||||||||||||||||||||||| || ||||||||||||||| || ||||| ||||| | || | |
|
|
| T |
5066894 |
ggagaaacctcggacaatattggacaatctttgagtactagcttttcaagattaggcatatatgaaaagtcaggggtgtgcatcagacaatgagaatggc |
5066993 |
T |
|
| Q |
318 |
taagtttaagaattttcagcttctccatcctctgcaagaaca |
359 |
Q |
| |
|
|||| || |||||||||||||| ||||||||||||||||||| |
|
|
| T |
5066994 |
taagatttagaattttcagcttttccatcctctgcaagaaca |
5067035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 127; E-Value: 5e-65
Query Start/End: Original strand, 17 - 359
Target Start/End: Original strand, 5102613 - 5102955
Alignment:
| Q |
17 |
gttattgcagtgttatctgcaagcagggtggttaaggattccatttgatcctagtccttttccaacttgtcgatatttaaacaaccagaaagaatgagag |
116 |
Q |
| |
|
|||||||||||||| | ||| || || |||||||| ||||||||||| ||| |||| | |||||||||||| || ||||||| |||||||||||||| |
|
|
| T |
5102613 |
gttattgcagtgttgtttgctagaagagtggttaatgattccatttgttccaagtcgtcttccaacttgtcaatcattaaacacccagaaagaatgagta |
5102712 |
T |
|
| Q |
117 |
ttttcaaagattttaacttatatatgcttcttgggaggttatgtaggccaatacaatcttccaaatttatcagaagaattttgttgagatgtccaatgct |
216 |
Q |
| |
|
||||||||||||| |||||||| ||||||||||| ||| || | |||| || |||||||||||||| ||| ||||| |||| |||||| ||||||| | |
|
|
| T |
5102713 |
ttttcaaagatttcaacttatagatgcttcttggaaggctacgaaggctaacacaatcttccaaatctattagaagtatttcagtgagatctccaatggt |
5102812 |
T |
|
| Q |
217 |
aggagaaatctcggaaagacttggacaatctaagagtactagcttttcaagattaggcaaatttgaaaagtcaggggtttgtgtcagaaaatgacagtga |
316 |
Q |
| |
|
|||| ||| ||| || | ||||||||||| |||||| ||||| |||||||||||||| | ||||||||||||||| || |||||| ||||| | ||| |
|
|
| T |
5102813 |
aggacaaacctcagacaacattggacaatctttgagtaccagcttctcaagattaggcaagtatgaaaagtcaggggtgtgcgtcagacaatgagaatga |
5102912 |
T |
|
| Q |
317 |
ctaagtttaagaattttcagcttctccatcctctgcaagaaca |
359 |
Q |
| |
|
||||| || |||||||||||||| |||| |||||||||||||| |
|
|
| T |
5102913 |
ctaagatttagaattttcagcttttccaacctctgcaagaaca |
5102955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 127; E-Value: 5e-65
Query Start/End: Original strand, 17 - 359
Target Start/End: Complemental strand, 5447239 - 5446897
Alignment:
| Q |
17 |
gttattgcagtgttatctgcaagcagggtggttaaggattccatttgatcctagtccttttccaacttgtcgatatttaaacaaccagaaagaatgagag |
116 |
Q |
| |
|
||||||| |||||||| |||||| || |||||||| |||||||||| || |||||| ||||| |||||| || ||||||||||||||||||| ||||| |
|
|
| T |
5447239 |
gttattgaagtgttatttgcaagaagagtggttaaagattccattttctcgaagtcctcttccaccttgtcaatctttaaacaaccagaaagaacgagag |
5447140 |
T |
|
| Q |
117 |
ttttcaaagattttaacttatatatgcttcttgggaggttatgtaggccaatacaatcttccaaatttatcagaagaattttgttgagatgtccaatgct |
216 |
Q |
| |
|
||||||||||||| |||||||| |||||| |||||||| || ||||| ||| || |||||||| ||||||||||||||||| |||||||||| ||||| |
|
|
| T |
5447139 |
ttttcaaagatttcaacttatagatgctttttgggaggctacataggctaatgcagtcttccaagtttatcagaagaattttattgagatgtctgatgct |
5447040 |
T |
|
| Q |
217 |
aggagaaatctcggaaagacttggacaatctaagagtactagcttttcaagattaggcaaatttgaaaagtcaggggtttgtgtcagaaaatgacagtga |
316 |
Q |
| |
|
||| |||| ||| || | ||| |||||| ||||||||| |||| |||||||||| ||||||||||||||| ||||||| ||| | || | || |
|
|
| T |
5447039 |
aggtgaaacctcagacaacagtgggcaatctttgagtactagtttttgaagattaggcgtgtttgaaaagtcagggctttgtgtgagatagtgcgaatgg |
5446940 |
T |
|
| Q |
317 |
ctaagtttaagaattttcagcttctccatcctctgcaagaaca |
359 |
Q |
| |
|
||||| || |||||||| ||||||||||||||||||||||||| |
|
|
| T |
5446939 |
ctaagattgagaatttttagcttctccatcctctgcaagaaca |
5446897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 122; E-Value: 5e-62
Query Start/End: Original strand, 18 - 359
Target Start/End: Complemental strand, 5096789 - 5096448
Alignment:
| Q |
18 |
ttattgcagtgttatctgcaagcagggtggttaaggattccatttgatcctagtccttttccaacttgtcgatatttaaacaaccagaaagaatgagagt |
117 |
Q |
| |
|
||||| ||||||||| ||||||||| ||||||| ||||||||||| || ||||| |||||||| ||| || ||| ||| ||||||||||||||||| |
|
|
| T |
5096789 |
ttattccagtgttatttgcaagcagaatggttaatgattccatttgttctatgtcctcttccaactcgtcaatcattatacacccagaaagaatgagagt |
5096690 |
T |
|
| Q |
118 |
tttcaaagattttaacttatatatgcttcttgggaggttatgtaggccaatacaatcttccaaatttatcagaagaattttgttgagatgtccaatgcta |
217 |
Q |
| |
|
||||| |||||| |||||||| ||||||| ||| ||| || | |||| || |||||||||||||| ||| |||||||||| |||||| |||||||||| |
|
|
| T |
5096689 |
tttcagagatttcaacttatagatgcttcctggaaggctacgaaggctaacacaatcttccaaatctattagaagaatttcactgagatttccaatgcta |
5096590 |
T |
|
| Q |
218 |
ggagaaatctcggaaagacttggacaatctaagagtactagcttttcaagattaggcaaatttgaaaagtcaggggtttgtgtcagaaaatgacagtgac |
317 |
Q |
| |
|
||||||| ||| || | ||||||||||| ||||| ||||| ||||||||||||| | ||||||||| ||||| ||||||||| ||||| | |||| |
|
|
| T |
5096589 |
ggagaaacctcagacaacattggacaatctttaagtaccagcttctcaagattaggcatgtatgaaaagtctggggtgtgtgtcagacaatgagaatgac |
5096490 |
T |
|
| Q |
318 |
taagtttaagaattttcagcttctccatcctctgcaagaaca |
359 |
Q |
| |
|
|||| || ||||||||||| || ||||||||||||||||||| |
|
|
| T |
5096489 |
taagatttagaattttcagtttttccatcctctgcaagaaca |
5096448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 17 - 351
Target Start/End: Original strand, 5073907 - 5074241
Alignment:
| Q |
17 |
gttattgcagtgttatctgcaagcagggtggttaaggattccatttgatcctagtccttttccaacttgtcgatatttaaacaaccagaaagaatgagag |
116 |
Q |
| |
|
|||||||| ||||||| ||| | ||| |||||||| ||| ||| || || |||||| |||||||||||| || || |||| || ||||||||||||| |
|
|
| T |
5073907 |
gttattgcggtgttatttgctatcagagtggttaaagatgtcatctgttctaagtcctcttccaacttgtcaatcattgaacacccggaaagaatgagag |
5074006 |
T |
|
| Q |
117 |
ttttcaaagattttaacttatatatgcttcttgggaggttatgtaggccaatacaatcttccaaatttatcagaagaattttgttgagatgtccaatgct |
216 |
Q |
| |
|
|||| | |||||| |||||||| || |||||||| ||| | || || ||||||||||||||||||||||||||||||||||| ||||||||| |||| || |
|
|
| T |
5074007 |
tttttagagatttcaacttatagatacttcttggaaggctctgaagaccaatacaatcttccaaatttatcagaagaattttattgagatgttcaatact |
5074106 |
T |
|
| Q |
217 |
aggagaaatctcggaaagacttggacaatctaagagtactagcttttcaagattaggcaaatttgaaaagtcaggggtttgtgtcagaaaatgacagtga |
316 |
Q |
| |
|
| |||||| ||| || | |||||||||||| ||||||||| | ||||||||||||||| |||||||| || || ||||| |||||| ||||| | ||| |
|
|
| T |
5074107 |
atgagaaacctctgacaaccttggacaatctgtgagtactagttgttcaagattaggcaagtttgaaaaatctggagtttgcgtcagataatgagaatga |
5074206 |
T |
|
| Q |
317 |
ctaagtttaagaattttcagcttctccatcctctg |
351 |
Q |
| |
|
||||| || || |||||||||||||||| |||||| |
|
|
| T |
5074207 |
ctaagattgagtattttcagcttctccaacctctg |
5074241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 18 - 359
Target Start/End: Complemental strand, 5425991 - 5425650
Alignment:
| Q |
18 |
ttattgcagtgttatctgcaagcagggtggttaaggattccatttgatcctagtccttttccaacttgtcgatatttaaacaaccagaaagaatgagagt |
117 |
Q |
| |
|
|||||||||| |||| ||||| ||| |||||||| ||||||||||| || ||||| |||||||||||| || ||| ||| ||||||||||||||||| |
|
|
| T |
5425991 |
ttattgcagttttatgtgcaatcagagtggttaaagattccatttgttctatgtcctcttccaacttgtcaatcattacacacccagaaagaatgagagt |
5425892 |
T |
|
| Q |
118 |
tttcaaagattttaacttatatatgcttcttgggaggttatgtaggccaatacaatcttccaaatttatcagaagaattttgttgagatgtccaatgcta |
217 |
Q |
| |
|
||||| |||||| |||||||| ||| ||||||| ||| | || |||| || ||||||||| |||||||| |||||||||| |||||| |||||||||| |
|
|
| T |
5425891 |
tttcagagatttcaacttatagatgtttcttggaaggctttgaaggcgaacacaatcttctaaatttattagaagaatttctctgagatttccaatgcta |
5425792 |
T |
|
| Q |
218 |
ggagaaatctcggaaagacttggacaatctaagagtactagcttttcaagattaggcaaatttgaaaagtcaggggtttgtgtcagaaaatgacagtgac |
317 |
Q |
| |
|
||||||||||| || | ||||||||||| ||| || ||||||||||||||||||| || |||||||||||| | |||||| ||||| | |||| |
|
|
| T |
5425791 |
ggagaaatctcagacaacattggacaatctttgagcaccagcttttcaagattaggcatgaatgtaaagtcaggggtgcgcgtcagacaatgagaatgac |
5425692 |
T |
|
| Q |
318 |
taagtttaagaattttcagcttctccatcctctgcaagaaca |
359 |
Q |
| |
|
|||| || |||||||||||||| ||||||| |||||| |||| |
|
|
| T |
5425691 |
taagatttagaattttcagcttttccatccactgcaaaaaca |
5425650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 69 - 361
Target Start/End: Original strand, 5284440 - 5284732
Alignment:
| Q |
69 |
agtccttttccaacttgtcgatatttaaacaaccagaaagaatgagagttttcaaagattttaacttatatatgcttcttgggaggttatgtaggccaat |
168 |
Q |
| |
|
|||||| |||||||||||| || || |||| ||| ||||||||| |||||| | |||||| |||||||| ||||||| ||||||| || || || ||| |
|
|
| T |
5284440 |
agtcctcttccaacttgtcaatcattgaacacccaaaaagaatgaaagtttttagagatttcaacttatagatgcttcgtgggaggctacataagctaat |
5284539 |
T |
|
| Q |
169 |
acaatcttccaaatttatcagaagaattttgttgagatgtccaatgctaggagaaatctcggaaagacttggacaatctaagagtactagcttttcaaga |
268 |
Q |
| |
|
|||| |||| |||||||||| | |||||| ||||||| |||||||||||| |||| ||| || || |||||||||||| ||| ||||||||||||||| |
|
|
| T |
5284540 |
acaaccttcaaaatttatcaaagcaattttattgagatttccaatgctaggtgaaacctcagatagccttggacaatctttgagcactagcttttcaaga |
5284639 |
T |
|
| Q |
269 |
ttaggcaaatttgaaaagtcaggggtttgtgtcagaaaatgacagtgactaagtttaagaattttcagcttctccatcctctgcaagaacata |
361 |
Q |
| |
|
||||||| || |||||||||||| || |||| ||| |||| | |||||||| || |||||||||||||||||||||||||||||||||||| |
|
|
| T |
5284640 |
ttaggcatgttcgaaaagtcagggcttcgtgtgagataatgggaatgactaagattgagaattttcagcttctccatcctctgcaagaacata |
5284732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 112; E-Value: 5e-56
Query Start/End: Original strand, 17 - 359
Target Start/End: Original strand, 5181926 - 5182268
Alignment:
| Q |
17 |
gttattgcagtgttatctgcaagcagggtggttaaggattccatttgatcctagtccttttccaacttgtcgatatttaaacaaccagaaagaatgagag |
116 |
Q |
| |
|
|||||||||||||||| ||||| || |||||||| |||| |||||| ||| | |||| |||||||||||| || ||||||| |||||||||||||||| |
|
|
| T |
5181926 |
gttattgcagtgttatttgcaatcaatgtggttaaagatttcatttgttccaaatcctcttccaacttgtcaatcattaaacacccagaaagaatgagag |
5182025 |
T |
|
| Q |
117 |
ttttcaaagattttaacttatatatgcttcttgggaggttatgtaggccaatacaatcttccaaatttatcagaagaattttgttgagatgtccaatgct |
216 |
Q |
| |
|
| || || ||||| || ||||| ||||||||||| ||| | || |||| ||| ||||||||||||||||||| ||| ||||| ||||||| |||||| || |
|
|
| T |
5182026 |
tgtttaatgatttcaaattatagatgcttcttggaaggctttgaaggctaatgcaatcttccaaatttatcaaaagtattttattgagatctccaatact |
5182125 |
T |
|
| Q |
217 |
aggagaaatctcggaaagactt-ggacaatctaagagtactagcttttcaagattaggcaaatttgaaaagtcaggggtttgtgtcagaaaatgacagtg |
315 |
Q |
| |
|
| |||| || || | |||| ||||||||| |||||||| || |||||| |||||||| ||||||||||| || || | || |||||||||| | || |
|
|
| T |
5182126 |
ttgggaaacttcagaca-acttcggacaatctgtgagtactaactgttcaaggttaggcaagtttgaaaagtctggagtctttgacagaaaatgagaatg |
5182224 |
T |
|
| Q |
316 |
actaagtttaagaattttcagcttctccatcctctgcaagaaca |
359 |
Q |
| |
|
|||||| || ||||||||||||||||||| |||||||||||||| |
|
|
| T |
5182225 |
actaagattgagaattttcagcttctccagcctctgcaagaaca |
5182268 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 18 - 347
Target Start/End: Complemental strand, 5350475 - 5350148
Alignment:
| Q |
18 |
ttattgcagtgttatctgcaagcagggtggttaaggattccatttgatcctagtccttttccaacttgtcgatatttaaacaaccagaaagaatgagagt |
117 |
Q |
| |
|
|||||||||| |||| ||||||||| |||||||| ||||||||||| || ||||| |||||||||||| || ||| ||| || |||||||||||||| |
|
|
| T |
5350475 |
ttattgcagttttatgtgcaagcagagtggttaaagattccatttgttctatgtcctcttccaacttgtcaatcattatacaccctgaaagaatgagagt |
5350376 |
T |
|
| Q |
118 |
tttcaaagattttaacttatatatgcttcttgggaggttatgtaggccaatacaatcttccaaatttatcagaagaattttgttgagatgtccaatgcta |
217 |
Q |
| |
|
||| | |||||| |||||| | ||||||||||| ||| | || |||| || |||||| ||||||| ||| |||||||||| |||||| |||||||||| |
|
|
| T |
5350375 |
tttgagagatttcaacttaaagatgcttcttggaaggctttgaaggctaacacaatcctccaaatctattagaagaatttcactgagatctccaatgcta |
5350276 |
T |
|
| Q |
218 |
ggagaaatctcggaaagacttggacaatctaagagtactagcttttcaagattaggcaaatttgaaaagtcaggggtttgtgtcagaaaatgacagtgac |
317 |
Q |
| |
|
||||||| |||||| | ||||||||||| |||||||||||||||||||||||||| | ||||||||| |||| ||||||||| || | | |||| |
|
|
| T |
5350275 |
ggagaaacctcggacaacattggacaatctttgagtactagcttttcaagattaggcatgtatgaaaagtc--gggtgtgtgtcagacaacaagaatgac |
5350178 |
T |
|
| Q |
318 |
taagtttaagaattttcagcttctccatcc |
347 |
Q |
| |
|
|||| || |||||||||||||| ||||||| |
|
|
| T |
5350177 |
taagatttagaattttcagcttttccatcc |
5350148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 17 - 361
Target Start/End: Original strand, 5257333 - 5257677
Alignment:
| Q |
17 |
gttattgcagtgttatctgcaagcagggtggttaaggattccatttgatcctagtccttttccaacttgtcgatatttaaacaaccagaaagaatgagag |
116 |
Q |
| |
|
|||||||||||||||| ||||| || |||||||| ||| ||| || || |||||| |||||||||||| || || |||| ||||||||||||| || |
|
|
| T |
5257333 |
gttattgcagtgttatttgcaattagagtggttaaagatgtcatctgttctaagtcctcttccaacttgtcaatcattgaacacccagaaagaatgaaag |
5257432 |
T |
|
| Q |
117 |
ttttcaaagattttaacttatatatgcttcttgggaggttatgtaggccaatacaatcttccaaatttatcagaagaattttgttgagatgtccaatgct |
216 |
Q |
| |
|
|||| | |||||| |||||||| |||||||||||||| | || || ||||||||||||||||||||||| || |||||| ||||||| ||||||||| |
|
|
| T |
5257433 |
tttttagagatttcaacttatagatgcttcttgggagttcgcataagctaatacaatcttccaaatttatcaaaacaattttcttgagatttccaatgct |
5257532 |
T |
|
| Q |
217 |
aggagaaatctcggaaagacttggacaatctaagagtactagcttttcaagattaggcaaatttgaaaagtcaggggtttgtgtcagaaaatgacagtga |
316 |
Q |
| |
|
| ||||| | || || ||||||||||| |||||||| ||||||||||||||||| || |||||||||||| || ||| ||| || | | ||| |
|
|
| T |
5257533 |
tgaagaaaccctagatagcattggacaatctttgagtactaacttttcaagattaggcatgttggaaaagtcagggcttcttgtgagacaacgggaatga |
5257632 |
T |
|
| Q |
317 |
ctaagtttaagaattttcagcttctccatcctctgcaagaacata |
361 |
Q |
| |
|
||||| || |||||||||||||||||||||||||||||||||||| |
|
|
| T |
5257633 |
ctaagattgagaattttcagcttctccatcctctgcaagaacata |
5257677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 18 - 359
Target Start/End: Complemental strand, 5370652 - 5370311
Alignment:
| Q |
18 |
ttattgcagtgttatctgcaagcagggtggttaaggattccatttgatcctagtccttttccaacttgtcgatatttaaacaaccagaaagaatgagagt |
117 |
Q |
| |
|
||||||||||||||| ||||||||| |||||||| |||||||| || || |||| ||||||||| || || ||| ||| || |||||||| ||||| |
|
|
| T |
5370652 |
ttattgcagtgttatttgcaagcagagtggttaatgattccatctgttctatatcctcttccaacttctcaatcattacacaccctgaaagaataagagt |
5370553 |
T |
|
| Q |
118 |
tttcaaagattttaacttatatatgcttcttgggaggttatgtaggccaatacaatcttccaaatttatcagaagaattttgttgagatgtccaatgcta |
217 |
Q |
| |
|
|| | |||||| |||||||| ||||||||||| |||||| | |||| || ||||||||| |||| ||| |||||||||| | ||||| ||||||||| |
|
|
| T |
5370552 |
ctttagagatttcaacttataaatgcttcttggaaggttacgaaggctaacacaatcttcaaaatctattagaagaatttcgccgagattcccaatgcta |
5370453 |
T |
|
| Q |
218 |
ggagaaatctcggaaagacttggacaatctaagagtactagcttttcaagattaggcaaatttgaaaagtcaggggtttgtgtcagaaaatgacagtgac |
317 |
Q |
| |
|
||||||| ||| || || ||| ||||||| |||||||| ||||||||| |||||||| | ||||||||| ||||| || |||||| ||||| | |||| |
|
|
| T |
5370452 |
ggagaaacctcagacagcattgaacaatctttgagtactaacttttcaagcttaggcaagtatgaaaagtctggggtgtgcgtcagacaatgagaatgac |
5370353 |
T |
|
| Q |
318 |
taagtttaagaattttcagcttctccatcctctgcaagaaca |
359 |
Q |
| |
|
|||| || |||||||| ||||| |||||| |||||||||||| |
|
|
| T |
5370352 |
taagatttagaatttttagcttttccatcatctgcaagaaca |
5370311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 18 - 359
Target Start/End: Original strand, 5157628 - 5157969
Alignment:
| Q |
18 |
ttattgcagtgttatctgcaagcagggtggttaaggattccatttgatcctagtccttttccaacttgtcgatatttaaacaaccagaaagaatgagagt |
117 |
Q |
| |
|
|||||||||||| | ||||||||| |||||||| |||||||| || || ||||| |||||||||||| || ||| ||| || |||||||| | | | |
|
|
| T |
5157628 |
ttattgcagtgtcgtgtgcaagcagagtggttaaagattccatctgttctatgtcctcttccaacttgtcaatcattatacaccctgaaagaattaaaat |
5157727 |
T |
|
| Q |
118 |
tttcaaagattttaacttatatatgcttcttgggaggttatgtaggccaatacaatcttccaaatttatcagaagaattttgttgagatgtccaatgcta |
217 |
Q |
| |
|
||||| |||||| |||||||| ||||||||||| ||| | | |||| || |||||||||||||| ||| |||||||||| |||||| |||||||||| |
|
|
| T |
5157728 |
tttcagagatttcaacttatagatgcttcttggaaggcttcgaaggctaacacaatcttccaaatctattagaagaatttcactgagatttccaatgcta |
5157827 |
T |
|
| Q |
218 |
ggagaaatctcggaaagacttggacaatctaagagtactagcttttcaagattaggcaaatttgaaaagtcaggggtttgtgtcagaaaatgacagtgac |
317 |
Q |
| |
|
||||||| ||| || | ||||||||||| |||||| ||||| ||||||||||||| | ||||||||| ||||| || |||||| ||||| | |||| |
|
|
| T |
5157828 |
ggagaaacctcagacaacattggacaatctttgagtaccagcttctcaagattaggcatgtatgaaaagtctggggtgtgcgtcagacaatgagaatgac |
5157927 |
T |
|
| Q |
318 |
taagtttaagaattttcagcttctccatcctctgcaagaaca |
359 |
Q |
| |
|
|||| || |||||||| ||||| |||||| |||||||||||| |
|
|
| T |
5157928 |
taagatttagaatttttagcttttccatcatctgcaagaaca |
5157969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 168 - 361
Target Start/End: Original strand, 5147046 - 5147239
Alignment:
| Q |
168 |
tacaatcttccaaatttatcagaagaattttgttgagatgtccaatgctaggagaaatctcggaaagacttggacaatctaagagtactagcttttcaag |
267 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||| |||||| ||| |||||| || || | |||||||||| |||||||||| | |||||| |
|
|
| T |
5147046 |
tacaatcttccaaatttatcagaagaattttattgagatatccaatactatgagaaacttcagacaacattggacaatcagagagtactagttgttcaag |
5147145 |
T |
|
| Q |
268 |
attaggcaaatttgaaaagtcaggggtttgtgtcagaaaatgacagtgactaagtttaagaattttcagcttctccatcctctgcaagaacata |
361 |
Q |
| |
|
||||||||| ||| |||||| ||||| ||||||| | ||||| |||||||||| || |||||||| ||||||||||||||||||||||||||| |
|
|
| T |
5147146 |
attaggcaagtttaaaaagtttggggtctgtgtcaaataatgagagtgactaagcttgagaatttttagcttctccatcctctgcaagaacata |
5147239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 69 - 359
Target Start/End: Original strand, 5243918 - 5244208
Alignment:
| Q |
69 |
agtccttttccaacttgtcgatatttaaacaaccagaaagaatgagagttttcaaagattttaacttatatatgcttcttgggaggttatgtaggccaat |
168 |
Q |
| |
|
|||||| ||||||||| || || ||| ||| || || ||||||| |||||||| |||||| |||||||| ||||||||||| ||| | | |||| || |
|
|
| T |
5243918 |
agtcctcttccaacttctcaatcattatacaccctgagagaatgaaagttttcagagatttcaacttatagatgcttcttggaaggcttcgaaggctaac |
5244017 |
T |
|
| Q |
169 |
acaatcttccaaatttatcagaagaattttgttgagatgtccaatgctaggagaaatctcgga-aagacttggacaatctaagagtactagcttttcaag |
267 |
Q |
| |
|
|||||||||||||| ||| |||||||||| |||||| ||||||||||||||||||||||| || || || ||||||| |||||||||||||||||| |
|
|
| T |
5244018 |
acaatcttccaaatctattagaagaatttcactgagattcccaatgctaggagaaatctcggacaacac-tgaacaatctttgagtactagcttttcaag |
5244116 |
T |
|
| Q |
268 |
attaggcaaatttgaaaagtcaggggtttgtgtcagaaaatgacagtgactaagtttaagaattttcagcttctccatcctctgcaagaaca |
359 |
Q |
| |
|
||| | || | ||||||||| ||||| || |||||| ||||| | |||||||| || |||||||| ||||| |||||| || |||||||| |
|
|
| T |
5244117 |
atttgacatgtatgaaaagtctggggtgtgcgtcagacaatgagaatgactaagatttagaatttttagcttttccatcatccacaagaaca |
5244208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 18 - 361
Target Start/End: Complemental strand, 5397031 - 5396688
Alignment:
| Q |
18 |
ttattgcagtgttatctgcaagcagggtggttaaggattccatttgatcctagtccttttccaacttgtcgatatttaaacaaccagaaagaatgagagt |
117 |
Q |
| |
|
||||||||||||||| ||||| || ||||||||| |||||||| || ||| | || | |||||| ||||| || |||||| |||||||||| ||||| |
|
|
| T |
5397031 |
ttattgcagtgttatttgcaaccaaggtggttaaagattccatctgttccaaatcttcttccaatttgtcaatcagtaaacacccagaaagaagaagagt |
5396932 |
T |
|
| Q |
118 |
tttcaaagattttaacttatatatgcttcttgggaggttatgtaggccaatacaatcttccaaatttatcagaagaattttgttgagatgtccaatgcta |
217 |
Q |
| |
|
|| | ||||| |||||||| || |||||||| ||| | || || |||||||| ||||||||||| ||||| ||||| || |||| |||||| || |
|
|
| T |
5396931 |
ttgtagtgatttcaacttataaatacttcttggaaggctttgaagcttaatacaattctccaaatttattagaagtatttttttcagatctccaatatta |
5396832 |
T |
|
| Q |
218 |
ggagaaatctcggaaagacttggacaatctaagagtactagcttttcaagattaggcaaatttgaaaagtcaggggtttgtgtcagaaaatgacagtgac |
317 |
Q |
| |
|
| |||| || || | |||||||||| || |||||| | |||||||||||||| ||||||||||| ||||| ||||||| | ||||| | |||| |
|
|
| T |
5396831 |
tgggaaacttctgacaactttggacaatcagtgactactagttgttcaagattaggcatgtttgaaaagtctggggtctgtgtcaaataatgagaatgac |
5396732 |
T |
|
| Q |
318 |
taagtttaagaattttcagcttctccatcctctgcaagaacata |
361 |
Q |
| |
|
|||| || ||||||||||||||||||| |||||||||||||||| |
|
|
| T |
5396731 |
taagattgagaattttcagcttctccagcctctgcaagaacata |
5396688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 5179625 - 5179521
Alignment:
| Q |
15 |
tagttattgcagtgttatctgcaagcagggtggttaaggattccatttgatcctagtccttttccaacttgtcgatatttaaacaaccagaaagaatgag |
114 |
Q |
| |
|
||||||||||||||| || |||| |||||| |||||||||||||||| ||| |||||| ||||||||||| || ||| |||| ||||||||||| || |
|
|
| T |
5179625 |
tagttattgcagtgtcattagcaatcagggtcgttaaggattccatttcttccaagtcctcttccaacttgttaatctttgaacacccagaaagaatcag |
5179526 |
T |
|
| Q |
115 |
agttt |
119 |
Q |
| |
|
||||| |
|
|
| T |
5179525 |
agttt |
5179521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 5281382 - 5281280
Alignment:
| Q |
17 |
gttattgcagtgttatctgcaagcagggtggttaaggattccatttgatcctagtccttttccaacttgtcgatatttaaacaaccagaaagaatgagag |
116 |
Q |
| |
|
||||||||||||| || |||| |||||| ||||||||||||||||| ||| |||||| ||| ||||||| || || |||| ||||||||||| |||| |
|
|
| T |
5281382 |
gttattgcagtgtcattagcaatcagggtcgttaaggattccatttgttccaagtcctcttctaacttgttaatcattgaacacccagaaagaatcagag |
5281283 |
T |
|
| Q |
117 |
ttt |
119 |
Q |
| |
|
||| |
|
|
| T |
5281282 |
ttt |
5281280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 154; Significance: 4e-81; HSPs: 13)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 154; E-Value: 4e-81
Query Start/End: Original strand, 17 - 358
Target Start/End: Complemental strand, 4344728 - 4344387
Alignment:
| Q |
17 |
gttattgcagtgttatctgcaagcagggtggttaaggattccatttgatcctagtccttttccaacttgtcgatatttaaacaaccagaaagaatgagag |
116 |
Q |
| |
|
||||| |||||||||| ||||| ||| |||||||| ||||||||||| ||| |||||| |||||||||||| || ||||||| ||||| |||||||||| |
|
|
| T |
4344728 |
gttatagcagtgttatttgcaatcagagtggttaaagattccatttgttccaagtcctcttccaacttgtcaatcattaaacatccagatagaatgagag |
4344629 |
T |
|
| Q |
117 |
ttttcaaagattttaacttatatatgcttcttgggaggttatgtaggccaatacaatcttccaaatttatcagaagaattttgttgagatgtccaatgct |
216 |
Q |
| |
|
|||||| |||||| ||| |||| ||| ||||||| |||||| |||| |||||||| || ||||||||||| |||||||||||||||||||||||| || |
|
|
| T |
4344628 |
ttttcagagatttcaacgtatagatgtttcttggaaggttacaaaggctaatacaatttttcaaatttatcaaaagaattttgttgagatgtccaatact |
4344529 |
T |
|
| Q |
217 |
aggagaaatctcggaaagacttggacaatctaagagtactagcttttcaagattaggcaaatttgaaaagtcaggggtttgtgtcagaaaatgacagtga |
316 |
Q |
| |
|
| |||||||| || || |||||||||||| ||||||||||||||||||||||||||| | |||||||||||| || ||||||||| ||||| | ||| |
|
|
| T |
4344528 |
ttgggaaatctcagacagccttggacaatctttgagtactagcttttcaagattaggcaagtatgaaaagtcaggcgtctgtgtcagacaatgagaatga |
4344429 |
T |
|
| Q |
317 |
ctaagtttaagaattttcagcttctccatcctctgcaagaac |
358 |
Q |
| |
|
|| || || ||||||||||||| |||||||||||||||||| |
|
|
| T |
4344428 |
ctgagattgagaattttcagctgatccatcctctgcaagaac |
4344387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 130; E-Value: 9e-67
Query Start/End: Original strand, 24 - 361
Target Start/End: Complemental strand, 4361152 - 4360815
Alignment:
| Q |
24 |
cagtgttatctgcaagcagggtggttaaggattccatttgatcctagtccttttccaacttgtcgatatttaaacaaccagaaagaatgagagttttcaa |
123 |
Q |
| |
|
||||||||| ||||| ||| |||||||| ||||||||||| ||| |||||| ||||||| |||| || || |||| ||||| |||||||||||||||| |
|
|
| T |
4361152 |
cagtgttatttgcaatcagagtggttaaagattccatttgttccaagtcctcttccaacgtgtcaatcattgaacatccagatagaatgagagttttcag |
4361053 |
T |
|
| Q |
124 |
agattttaacttatatatgcttcttgggaggttatgtaggccaatacaatcttccaaatttatcagaagaattttgttgagatgtccaatgctaggagaa |
223 |
Q |
| |
|
|||||| ||| |||| ||| ||||||| |||||| |||| ||| ||||||| ||||||||||| ||||||||| |||||||||||||| || | ||| |
|
|
| T |
4361052 |
agatttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaagaattttcttgagatgtccaatactttgggaa |
4360953 |
T |
|
| Q |
224 |
atctcggaaagacttggacaatctaagagtactagcttttcaagattaggcaaatttgaaaagtcaggggtttgtgtcagaaaatgacagtgactaagtt |
323 |
Q |
| |
|
||||| || || |||||||||||| |||||||||||||||||||||||||| | |||||||||||| || ||||||||| | ||| | |||||||| | |
|
|
| T |
4360952 |
atctcagacagccttggacaatctttaagtactagcttttcaagattaggcaagtatgaaaagtcaggcgtctgtgtcagatattgagaatgactaagat |
4360853 |
T |
|
| Q |
324 |
taagaattttcagcttctccatcctctgcaagaacata |
361 |
Q |
| |
|
| ||||||||||||| |||||||| ||| || |||||| |
|
|
| T |
4360852 |
tgagaattttcagctgctccatcccctgaaataacata |
4360815 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 17 - 359
Target Start/End: Original strand, 4123938 - 4124280
Alignment:
| Q |
17 |
gttattgcagtgttatctgcaagcagggtggttaaggattccatttgatcctagtccttttccaacttgtcgatatttaaacaaccagaaagaatgagag |
116 |
Q |
| |
|
||||| ||||| |||| ||||| ||| |||||||| ||||||||||| ||| | |||| |||||||||||| || ||||||| || || |||||||||| |
|
|
| T |
4123938 |
gttatagcagtattatttgcaatcagagtggttaaagattccatttgttccaactcctcttccaacttgtcaatcattaaacatcccgatagaatgagag |
4124037 |
T |
|
| Q |
117 |
ttttcaaagattttaacttatatatgcttcttgggaggttatgtaggccaatacaatcttccaaatttatcagaagaattttgttgagatgtccaatgct |
216 |
Q |
| |
|
|||||| |||||| ||| ||| ||| ||||||| |||||| |||| | ||||||||| ||||||||||| ||||| ||| || ||||||||||| | |
|
|
| T |
4124038 |
ttttcagagatttcaacgaataaatgtttcttggaaggttagaaaggctagtacaatctttcaaatttatcaaaagaactttcttaagatgtccaattgt |
4124137 |
T |
|
| Q |
217 |
aggagaaatctcggaaagacttggacaatctaagagtactagcttttcaagattaggcaaatttgaaaagtcaggggtttgtgtcagaaaatgacagtga |
316 |
Q |
| |
|
| | || | ||| || || |||||||||||| |||||| ||||||||||| |||||||| | ||||||||||||||| ||||||||| ||||| | ||| |
|
|
| T |
4124138 |
atgggatacctcagacagccttggacaatctttgagtaccagcttttcaaggttaggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatga |
4124237 |
T |
|
| Q |
317 |
ctaagtttaagaattttcagcttctccatcctctgcaagaaca |
359 |
Q |
| |
|
||||| || ||||||||||||| |||||| ||||||||||||| |
|
|
| T |
4124238 |
ctaagattgagaattttcagctgctccattctctgcaagaaca |
4124280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 115; E-Value: 8e-58
Query Start/End: Original strand, 24 - 354
Target Start/End: Original strand, 4320625 - 4320955
Alignment:
| Q |
24 |
cagtgttatctgcaagcagggtggttaaggattccatttgatcctagtccttttccaacttgtcgatatttaaacaaccagaaagaatgagagttttcaa |
123 |
Q |
| |
|
|||| |||| ||||| |||||||||||| ||||||||||| ||| |||||| |||||||||||| || ||||||| || || ||||||||||| |||| |
|
|
| T |
4320625 |
cagtattatttgcaatcagggtggttaaagattccatttgttccaagtcctcttccaacttgtcaatcattaaacatcccgatagaatgagagtattcag |
4320724 |
T |
|
| Q |
124 |
agattttaacttatatatgcttcttgggaggttatgtaggccaatacaatcttccaaatttatcagaagaattttgttgagatgtccaatgctaggagaa |
223 |
Q |
| |
|
|| ||| ||| |||| ||| ||||||| ||| || |||| ||||||||||| ||||||||||| || || ||| |||||||||||||||||| | ||| |
|
|
| T |
4320725 |
agttttcaacgtatagatgtttcttggaaggctacaaaggctaatacaatctttcaaatttatcaaaacaacttttttgagatgtccaatgctatgggaa |
4320824 |
T |
|
| Q |
224 |
atctcggaaagacttggacaatctaagagtactagcttttcaagattaggcaaatttgaaaagtcaggggtttgtgtcagaaaatgacagtgactaagtt |
323 |
Q |
| |
|
| || || || ||||| |||||| ||| ||||||||||||||||||||||| | ||||||||||||||| ||||||| | |||| | |||||||| | |
|
|
| T |
4320825 |
acctgagacagccttgggcaatcttcgagcactagcttttcaagattaggcaagtatgaaaagtcaggggtctgtgtcaaatgatgagaatgactaagat |
4320924 |
T |
|
| Q |
324 |
taagaattttcagcttctccatcctctgcaa |
354 |
Q |
| |
|
| ||||| ||||||| ||||||||||||||| |
|
|
| T |
4320925 |
ttagaatcttcagctgctccatcctctgcaa |
4320955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 24 - 357
Target Start/End: Complemental strand, 4335420 - 4335087
Alignment:
| Q |
24 |
cagtgttatctgcaagcagggtggttaaggattccatttgatcctagtccttttccaacttgtcgatatttaaacaaccagaaagaatgagagttttcaa |
123 |
Q |
| |
|
||||||||||||| | || |||||||| ||||||||||| ||| |||||| |||||||||||| || |||||||| || || |||||||||||||||| |
|
|
| T |
4335420 |
cagtgttatctgccatgagagtggttaaagattccatttgttccaagtcctcttccaacttgtcaatctttaaacatcctgatagaatgagagttttcag |
4335321 |
T |
|
| Q |
124 |
agattttaacttatatatgcttcttgggaggttatgtaggccaatacaatcttccaaatttatcagaagaattttgttgagatgtccaatgctaggagaa |
223 |
Q |
| |
|
||| || ||| |||| ||| ||||||| |||||| |||| ||| ||||||| ||||||||||| ||||| ||| || ||||||||||| || | || |
|
|
| T |
4335320 |
agacttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaagaactttcttaagatgtccaattgtatgggat |
4335221 |
T |
|
| Q |
224 |
atctcggaaagacttggacaatctaagagtactagcttttcaagattaggcaaatttgaaaagtcaggggtttgtgtcagaaaatgacagtgactaagtt |
323 |
Q |
| |
|
| ||| || || || ||||||||| ||||||||| ||||||||||||||||| | |||||| |||||||| ||||| ||| ||||| | |||||||| | |
|
|
| T |
4335220 |
acctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagat |
4335121 |
T |
|
| Q |
324 |
taagaattttcagcttctccatcctctgcaagaa |
357 |
Q |
| |
|
| |||||||||| || |||||||||||||||||| |
|
|
| T |
4335120 |
tgagaattttcaactgctccatcctctgcaagaa |
4335087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 17 - 359
Target Start/End: Original strand, 4133424 - 4133764
Alignment:
| Q |
17 |
gttattgcagtgttatctgcaagcagggtggttaaggattccatttgatcctagtccttttccaacttgtcgatatttaaacaaccagaaagaatgagag |
116 |
Q |
| |
|
||||||||||||||||| ||| ||| |||||||| || |||||||| ||| ||||||| |||| ||||| ||| ||||||| ||||||||||| |||| |
|
|
| T |
4133424 |
gttattgcagtgttatccacaatcagagtggttaaagactccatttgttccaagtcctt--ccaatttgtcaataattaaacagccagaaagaataagag |
4133521 |
T |
|
| Q |
117 |
ttttcaaagattttaacttatatatgcttcttgggaggttatgtaggccaatacaatcttccaaatttatcagaagaattttgttgagatgtccaatgct |
216 |
Q |
| |
|
|||||| |||||| ||| ||| ||| ||||||| |||||| | |||| | |||| |||| ||||||||| | |||| ||| | |||||| |||||| | |
|
|
| T |
4133522 |
ttttcagagatttcaacgaatagatggttcttggaaggttacgaaggctagtacagtctttcaaatttataatgagaactttatggagatgaccaatggt |
4133621 |
T |
|
| Q |
217 |
aggagaaatctcggaaagacttggacaatctaagagtactagcttttcaagattaggcaaatttgaaaagtcaggggtttgtgtcagaaaatgacagtga |
316 |
Q |
| |
|
| | |||| ||| || || |||||||||||| ||||| ||| ||||| |||||||||| | |||||| || ||||| ||| ||| ||||| | ||| |
|
|
| T |
4133622 |
atgggaaacctcagacagccttggacaatctttgagtattagtttttctagattaggcatgtgtgaaaaatctggggtctgtactagacaatgagaatga |
4133721 |
T |
|
| Q |
317 |
ctaagtttaagaattttcagcttctccatcctctgcaagaaca |
359 |
Q |
| |
|
||||| || |||| ||| || ||||||| |||||||||||||| |
|
|
| T |
4133722 |
ctaagattgagaaattttagattctccagcctctgcaagaaca |
4133764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 294
Target Start/End: Original strand, 7885396 - 7885667
Alignment:
| Q |
23 |
gcagtgttatctgcaagcagggtggttaaggattccatttgatcctagtccttttccaacttgtcgatatttaaacaaccagaaagaatgagagttttca |
122 |
Q |
| |
|
||||||| ||| |||| || ||||||||| |||| |||||| || |||| ||| |||||||| || ||| ||| ||||| |||||||| ||||||| |
|
|
| T |
7885396 |
gcagtgtcatccgcaaccaaggtggttaaagatttcatttgttctatatcctcttctaacttgtcaatttttgtacatccagacagaatgagtgttttca |
7885495 |
T |
|
| Q |
123 |
aagattttaacttatatatgcttcttgggaggttatgtaggccaatacaatcttccaaatttatcagaagaattttgttgagatgtccaatgctaggaga |
222 |
Q |
| |
|
|| | ||||||||||||||| ||||| || | | ||||| ||||||||| ||||||||| | |||||| || ||||||||||| || ||| ||| |
|
|
| T |
7885496 |
gcgagtctaacttatatatgctccttggaagttctcgaaggcctgtacaatctttcaaatttattaaaagaatctttttgagatgtcctatattagaaga |
7885595 |
T |
|
| Q |
223 |
aatctcggaaagacttggacaatctaagagtactagcttttcaagattaggcaaatttgaaaagtcaggggt |
294 |
Q |
| |
|
|| | || | ||| |||||||| |||| || |||||||||||| ||||| ||||||||||| ||||| |
|
|
| T |
7885596 |
aaccgaagacaaactgggacaatccttaagtattaacttttcaagatttggcaattttgaaaagtcgggggt |
7885667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 296
Target Start/End: Original strand, 6532392 - 6532510
Alignment:
| Q |
178 |
caaatttatcagaagaattttgttgagatgtccaatgctaggagaaatctcggaaagacttggacaatctaagagtactagcttttcaagattaggcaaa |
277 |
Q |
| |
|
||||||||||||||||| ||| | |||| |||||||||| | || | | | || | ||||||||| ||| |||||||| ||||||||||||||||| | |
|
|
| T |
6532392 |
caaatttatcagaagaagtttttggagagatccaatgctatgggagaccgcagacaaacttggacagtctttgagtactaacttttcaagattaggcata |
6532491 |
T |
|
| Q |
278 |
tttgaaaagtcaggggttt |
296 |
Q |
| |
|
| |||||||| ||||||| |
|
|
| T |
6532492 |
tatgaaaagtttggggttt |
6532510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 342
Target Start/End: Complemental strand, 6772953 - 6772861
Alignment:
| Q |
250 |
gagtactagcttttcaagattaggcaaatttgaaaagtcaggggtttgtgtcagaaaatgacagtgactaagtttaagaattttcagcttctc |
342 |
Q |
| |
|
||||||||||||||||||||| ||||| | ||||||||| ||||||| |||| | ||| | |||||||| ||||||||||| || ||||| |
|
|
| T |
6772953 |
gagtactagcttttcaagattcggcaagtatgaaaagtctggggtttcggtcaaatcatgggaatgactaagattaagaatttttagattctc |
6772861 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 296
Target Start/End: Original strand, 6545680 - 6545726
Alignment:
| Q |
250 |
gagtactagcttttcaagattaggcaaatttgaaaagtcaggggttt |
296 |
Q |
| |
|
|||||||| ||||||||||||||||| || ||||||||| ||||||| |
|
|
| T |
6545680 |
gagtactatcttttcaagattaggcatatatgaaaagtctggggttt |
6545726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 333
Target Start/End: Complemental strand, 6752824 - 6752726
Alignment:
| Q |
235 |
acttggacaatctaagagtactagcttttcaagattaggcaaatttgaaaagtcaggggtttgtgtcagaaaatgacagtgactaagtttaagaatttt |
333 |
Q |
| |
|
||||||||| ||| |||||| ||||||||||||||||||| || ||||||||| || |||| |||| | ||| | |||||||| ||||||||||| |
|
|
| T |
6752824 |
acttggacagtctttgagtacaagcttttcaagattaggcatatatgaaaagtctggagtttcggtcaaatcctgagaatgactaagattaagaatttt |
6752726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 333
Target Start/End: Complemental strand, 6837194 - 6837040
Alignment:
| Q |
179 |
aaatttatcagaagaattttgttgagatgtccaatgctaggagaaatctcggaaagacttggacaatctaagagtactagcttttcaagattaggcaaat |
278 |
Q |
| |
|
|||||||||||||||| ||| | |||| |||||||||| | || | | | || | ||||||||| ||| ||||||||||||||||||||| |||| || |
|
|
| T |
6837194 |
aaatttatcagaagaagtttatggagagatccaatgctatgggagaccgcagacaaacttggacagtctttgagtactagcttttcaagattcggcatat |
6837095 |
T |
|
| Q |
279 |
ttgaaaagtcaggggtttgtgtcagaaaatgacagtgactaagtttaagaatttt |
333 |
Q |
| |
|
||| ||||| || |||| |||| | ||| | |||||||| ||||||||||| |
|
|
| T |
6837094 |
atgagaagtctggagtttcagtcaaatcctgagaatgactaagattaagaatttt |
6837040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 296
Target Start/End: Complemental strand, 6815334 - 6815273
Alignment:
| Q |
235 |
acttggacaatctaagagtactagcttttcaagattaggcaaatttgaaaagtcaggggttt |
296 |
Q |
| |
|
||||||||||| | ||||||||||||||||||||| ||||| | || |||||| ||||||| |
|
|
| T |
6815334 |
acttggacaatttttgagtactagcttttcaagatttggcaagtatgtaaagtctggggttt |
6815273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 140; Significance: 9e-73; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 140; E-Value: 9e-73
Query Start/End: Original strand, 17 - 360
Target Start/End: Original strand, 47986851 - 47987194
Alignment:
| Q |
17 |
gttattgcagtgttatctgcaagcagggtggttaaggattccatttgatcctagtccttttccaacttgtcgatatttaaacaaccagaaagaatgagag |
116 |
Q |
| |
|
||||| |||||||||| ||||| || || ||||| |||| ||||| ||| ||||| ||||||||||| || |||||||| |||||||||||||||| |
|
|
| T |
47986851 |
gttatcgcagtgttatttgcaaccaaagtagttaaagatttcatttattccatgtcctcttccaacttgttaatctttaaacagccagaaagaatgagag |
47986950 |
T |
|
| Q |
117 |
ttttcaaagattttaacttatatatgcttcttgggaggttatgtaggccaatacaatcttccaaatttatcagaagaattttgttgagatgtccaatgct |
216 |
Q |
| |
|
|||| | ||||||||| || ||| |||||||||||||| || ||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
47986951 |
tttttagagattttaatttgtatgtgcttcttgggaggctacataggctaatacagtcttccaaatttatcagaagaattttgtcgagatgtccaatgct |
47987050 |
T |
|
| Q |
217 |
aggagaaatctcggaaagacttggacaatctaagagtactagcttttcaagattaggcaaatttgaaaagtcaggggtttgtgtcagaaaatgacagtga |
316 |
Q |
| |
|
|||||||||||| || | |||| |||||| ||||||||||||||| |||||||||| |||||||||||| || || |||| ||| ||||| | ||| |
|
|
| T |
47987051 |
aggagaaatctcagataacattgggcaatctttgagtactagcttttcgagattaggcatgtttgaaaagtcaaggcttcgtgtgagataatgagaatga |
47987150 |
T |
|
| Q |
317 |
ctaagtttaagaattttcagcttctccatcctctgcaagaacat |
360 |
Q |
| |
|
||||| || |||||||| ||||| |||||| ||||||||||||| |
|
|
| T |
47987151 |
ctaagattgagaatttttagcttttccatcttctgcaagaacat |
47987194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 140; E-Value: 9e-73
Query Start/End: Original strand, 17 - 360
Target Start/End: Original strand, 47996138 - 47996481
Alignment:
| Q |
17 |
gttattgcagtgttatctgcaagcagggtggttaaggattccatttgatcctagtccttttccaacttgtcgatatttaaacaaccagaaagaatgagag |
116 |
Q |
| |
|
||||| |||||||||| ||||| || || ||||| |||| ||||| ||| ||||| ||||||||||| || |||||||| |||||||||||||||| |
|
|
| T |
47996138 |
gttatcgcagtgttatttgcaaccaaagtagttaaagatttcatttattccatgtcctcttccaacttgttaatctttaaacagccagaaagaatgagag |
47996237 |
T |
|
| Q |
117 |
ttttcaaagattttaacttatatatgcttcttgggaggttatgtaggccaatacaatcttccaaatttatcagaagaattttgttgagatgtccaatgct |
216 |
Q |
| |
|
|||| | ||||||||| || ||| |||||||||||||| || ||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
47996238 |
tttttagagattttaatttgtatgtgcttcttgggaggctacataggctaatacagtcttccaaatttatcagaagaattttgtcgagatgtccaatgct |
47996337 |
T |
|
| Q |
217 |
aggagaaatctcggaaagacttggacaatctaagagtactagcttttcaagattaggcaaatttgaaaagtcaggggtttgtgtcagaaaatgacagtga |
316 |
Q |
| |
|
|||||||||||| || | |||| |||||| ||||||||||||||| |||||||||| |||||||||||| || || |||| ||| ||||| | ||| |
|
|
| T |
47996338 |
aggagaaatctcagataacattgggcaatctttgagtactagcttttcgagattaggcatgtttgaaaagtcaaggcttcgtgtgagataatgagaatga |
47996437 |
T |
|
| Q |
317 |
ctaagtttaagaattttcagcttctccatcctctgcaagaacat |
360 |
Q |
| |
|
||||| || |||||||| ||||| |||||| ||||||||||||| |
|
|
| T |
47996438 |
ctaagattgagaatttttagcttttccatcttctgcaagaacat |
47996481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 140; E-Value: 9e-73
Query Start/End: Original strand, 17 - 360
Target Start/End: Original strand, 48005425 - 48005768
Alignment:
| Q |
17 |
gttattgcagtgttatctgcaagcagggtggttaaggattccatttgatcctagtccttttccaacttgtcgatatttaaacaaccagaaagaatgagag |
116 |
Q |
| |
|
||||| |||||||||| ||||| || || ||||| |||| ||||| ||| ||||| ||||||||||| || |||||||| |||||||||||||||| |
|
|
| T |
48005425 |
gttatcgcagtgttatttgcaaccaaagtagttaaagatttcatttattccatgtcctcttccaacttgttaatctttaaacagccagaaagaatgagag |
48005524 |
T |
|
| Q |
117 |
ttttcaaagattttaacttatatatgcttcttgggaggttatgtaggccaatacaatcttccaaatttatcagaagaattttgttgagatgtccaatgct |
216 |
Q |
| |
|
|||| | ||||||||| || ||| |||||||||||||| || ||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
48005525 |
tttttagagattttaatttgtatgtgcttcttgggaggctacataggctaatacagtcttccaaatttatcagaagaattttgtcgagatgtccaatgct |
48005624 |
T |
|
| Q |
217 |
aggagaaatctcggaaagacttggacaatctaagagtactagcttttcaagattaggcaaatttgaaaagtcaggggtttgtgtcagaaaatgacagtga |
316 |
Q |
| |
|
|||||||||||| || | |||| |||||| ||||||||||||||| |||||||||| |||||||||||| || || |||| ||| ||||| | ||| |
|
|
| T |
48005625 |
aggagaaatctcagataacattgggcaatctttgagtactagcttttcgagattaggcatgtttgaaaagtcaaggcttcgtgtgagataatgagaatga |
48005724 |
T |
|
| Q |
317 |
ctaagtttaagaattttcagcttctccatcctctgcaagaacat |
360 |
Q |
| |
|
||||| || |||||||| ||||| |||||| ||||||||||||| |
|
|
| T |
48005725 |
ctaagattgagaatttttagcttttccatcttctgcaagaacat |
48005768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 140; E-Value: 9e-73
Query Start/End: Original strand, 17 - 360
Target Start/End: Original strand, 48014710 - 48015053
Alignment:
| Q |
17 |
gttattgcagtgttatctgcaagcagggtggttaaggattccatttgatcctagtccttttccaacttgtcgatatttaaacaaccagaaagaatgagag |
116 |
Q |
| |
|
||||| |||||||||| ||||| || || ||||| |||| ||||| ||| ||||| ||||||||||| || |||||||| |||||||||||||||| |
|
|
| T |
48014710 |
gttatcgcagtgttatttgcaaccaaagtagttaaagatttcatttattccatgtcctcttccaacttgttaatctttaaacagccagaaagaatgagag |
48014809 |
T |
|
| Q |
117 |
ttttcaaagattttaacttatatatgcttcttgggaggttatgtaggccaatacaatcttccaaatttatcagaagaattttgttgagatgtccaatgct |
216 |
Q |
| |
|
|||| | ||||||||| || ||| |||||||||||||| || ||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
48014810 |
tttttagagattttaatttgtatgtgcttcttgggaggctacataggctaatacagtcttccaaatttatcagaagaattttgtcgagatgtccaatgct |
48014909 |
T |
|
| Q |
217 |
aggagaaatctcggaaagacttggacaatctaagagtactagcttttcaagattaggcaaatttgaaaagtcaggggtttgtgtcagaaaatgacagtga |
316 |
Q |
| |
|
|||||||||||| || | |||| |||||| ||||||||||||||| |||||||||| |||||||||||| || || |||| ||| ||||| | ||| |
|
|
| T |
48014910 |
aggagaaatctcagataacattgggcaatctttgagtactagcttttcgagattaggcatgtttgaaaagtcaaggcttcgtgtgagataatgagaatga |
48015009 |
T |
|
| Q |
317 |
ctaagtttaagaattttcagcttctccatcctctgcaagaacat |
360 |
Q |
| |
|
||||| || |||||||| ||||| |||||| ||||||||||||| |
|
|
| T |
48015010 |
ctaagattgagaatttttagcttttccatcttctgcaagaacat |
48015053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 129
Target Start/End: Original strand, 32411278 - 32411311
Alignment:
| Q |
96 |
aacaaccagaaagaatgagagttttcaaagattt |
129 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| |
|
|
| T |
32411278 |
aacaaccagaaaggatgagagttttcaaagattt |
32411311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0294 (Bit Score: 125; Significance: 8e-64; HSPs: 1)
Name: scaffold0294
Description:
Target: scaffold0294; HSP #1
Raw Score: 125; E-Value: 8e-64
Query Start/End: Original strand, 17 - 361
Target Start/End: Original strand, 8899 - 9243
Alignment:
| Q |
17 |
gttattgcagtgttatctgcaagcagggtggttaaggattccatttgatcctagtccttttccaacttgtcgatatttaaacaaccagaaagaatgagag |
116 |
Q |
| |
|
|||| ||||||||||||||||||||| |||||||| |||||||| || || ||||| |||||||||||| || ||| ||| |||||||||||||||| |
|
|
| T |
8899 |
gttaatgcagtgttatctgcaagcagagtggttaaagattccatctgttctatgtcctcttccaacttgtcaatcattatacacccagaaagaatgagag |
8998 |
T |
|
| Q |
117 |
ttttcaaagattttaacttatatatgcttcttgggaggttatgtaggccaatacaatcttccaaatttatcagaagaattttgttgagatgtccaatgct |
216 |
Q |
| |
|
|||||| |||||| |||||||| ||||||||||| ||| || | |||| || |||||||||||||| ||| ||||| |||| ||||| ||||||| | |
|
|
| T |
8999 |
ttttcagagatttcaacttatagatgcttcttggaaggctacgaaggctaacacaatcttccaaatctattagaagtatttcaccgagatctccaatggt |
9098 |
T |
|
| Q |
217 |
aggagaaatctcggaaagacttggacaatctaagagtactagcttttcaagattaggcaaatttgaaaagtcaggggtttgtgtcagaaaatgacagtga |
316 |
Q |
| |
|
| |||||| ||||| | ||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||| || ||| | ||||| | ||| |
|
|
| T |
9099 |
atgagaaacctcggtcaacattggacaatctttgagtactagcttttcaagattaggcaaatatgaaaagtctggggtatgcatcaaataatgagaatga |
9198 |
T |
|
| Q |
317 |
ctaagtttaagaattttcagcttctccatcctctgcaagaacata |
361 |
Q |
| |
|
||||| || ||||||||||||||| ||| ||||||||||| |||| |
|
|
| T |
9199 |
ctaagattgagaattttcagcttcgccagcctctgcaagaccata |
9243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 116; Significance: 2e-58; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 18 - 361
Target Start/End: Complemental strand, 8877690 - 8877347
Alignment:
| Q |
18 |
ttattgcagtgttatctgcaagcagggtggttaaggattccatttgatcctagtccttttccaacttgtcgatatttaaacaaccagaaagaatgagagt |
117 |
Q |
| |
|
||||||||||||||| ||||||||| |||||||| |||| ||| || || |||||| ||||||||||| || || |||| |||||||||||||||| |
|
|
| T |
8877690 |
ttattgcagtgttatttgcaagcagagtggttaaagatttcatctgttctaagtcctcctccaacttgtcaatcattgaacacccagaaagaatgagaga |
8877591 |
T |
|
| Q |
118 |
tttcaaagattttaacttatatatgcttcttgggaggttatgtaggccaatacaatcttccaaatttatcagaagaattttgttgagatgtccaatgcta |
217 |
Q |
| |
|
||| | |||||| ||||| ||||| |||||||| ||| | | |||| ||||||||||||||||||||||| ||||| ||| || ||| |||| || || |
|
|
| T |
8877590 |
ttttagagatttcaacttgtatatacttcttggaaggctccgaaggctaatacaatcttccaaatttatcaaaagaactttattcagaagtcctatagta |
8877491 |
T |
|
| Q |
218 |
ggagaaatctcggaaagacttggacaatctaagagtactagcttttcaagattaggcaaatttgaaaagtcaggggtttgtgtcagaaaatgacagtgac |
317 |
Q |
| |
|
| |||||||| | || ||||||||| ||||||||||||||||||||||||||| ||| ||||||| || |||||||||||| |||| |||| | |
|
|
| T |
8877490 |
tgcgaaatctctatcaacctcggacaatctttgagtactagcttttcaagattaggcaagtttaaaaagtctggagtttgtgtcagatgatgagagtggc |
8877391 |
T |
|
| Q |
318 |
taagtttaagaattttcagcttctccatcctctgcaagaacata |
361 |
Q |
| |
|
|||| || |||||||| ||||||||||||||||||||||||||| |
|
|
| T |
8877390 |
taagattgagaatttttagcttctccatcctctgcaagaacata |
8877347 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 111; Significance: 2e-55; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 17 - 359
Target Start/End: Original strand, 36213828 - 36214170
Alignment:
| Q |
17 |
gttattgcagtgttatctgcaagcagggtggttaaggattccatttgatcctagtccttttccaacttgtcgatatttaaacaaccagaaagaatgagag |
116 |
Q |
| |
|
|||||||||||||||| ||||| || ||||||||| |||||||| || ||| ||||| |||||| ||||| || ||| |||| |||||||||||||||| |
|
|
| T |
36213828 |
gttattgcagtgttatttgcaatcaaggtggttaaagattccatctgttccatgtcctcttccaatttgtcaatctttgaacatccagaaagaatgagag |
36213927 |
T |
|
| Q |
117 |
ttttcaaagattttaacttatatatgcttcttgggaggttatgtaggccaatacaatcttccaaatttatcagaagaattttgttgagatgtccaatgct |
216 |
Q |
| |
|
|||| | ||||||||||||| || | | | || ||| | || |||| ||||||||||||||||||||| ||||||| ||| |||||||||||||| || |
|
|
| T |
36213928 |
ttttaagtaattttaacttatagatacctttaggaaggctttgaaggctaatacaatcttccaaatttattagaagaactttattgagatgtccaatact |
36214027 |
T |
|
| Q |
217 |
aggagaaatctcggaaagacttggacaatctaagagtactagcttttcaagattaggcaaatttgaaaagtcaggggtttgtgtcagaaaatgacagtga |
316 |
Q |
| |
|
| |||| ||| || | |||||||||||| ||||||||| |||||||| ||||||| |||||||| || || || | ||||||| ||||| | ||| |
|
|
| T |
36214028 |
gtgggaaacctcagacaatcttggacaatctgtgagtactagtttttcaaggttaggcatgtttgaaaaatctggagtctttgtcagataatgagaatga |
36214127 |
T |
|
| Q |
317 |
ctaagtttaagaattttcagcttctccatcctctgcaagaaca |
359 |
Q |
| |
|
||||| || |||||||||||||| |||| |||||||||||||| |
|
|
| T |
36214128 |
ctaagattgagaattttcagcttttccagcctctgcaagaaca |
36214170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 70 - 338
Target Start/End: Complemental strand, 18935415 - 18935147
Alignment:
| Q |
70 |
gtccttttccaacttgtcgatatttaaacaaccagaaagaatgagagttttcaaagattttaacttatatatgcttcttgggaggttatgtaggccaata |
169 |
Q |
| |
|
||||| |||||||||||| || ||| ||| ||||| | |||||||| ||| | || | ||| ||||| ||||||||||| || | | ||||| || |
|
|
| T |
18935415 |
gtcctcttccaacttgtcaatttttgtacatccagataaaatgagagctttgaccgactctaatttatagatgcttcttggaagttcacaaaggcctgta |
18935316 |
T |
|
| Q |
170 |
caatcttccaaatttatcagaagaattttgttgagatgtccaatgctaggagaaatctcggaaagacttggacaatctaagagtactagcttttcaagat |
269 |
Q |
| |
|
|| |||| ||||||||| | ||||||||| |||||| |||| || ||| |||||| | ||| | |||||| |||||| ||||| || ||||||||||| |
|
|
| T |
18935315 |
cagtctttcaaatttattaaaagaattttcttgagaagtcctatactatgagaaaccgaggacaaacttgggcaatctttgagtattaacttttcaagat |
18935216 |
T |
|
| Q |
270 |
taggcaaatttgaaaagtcaggggtttgtgtcagaaaatgacagtgactaagtttaagaattttcagct |
338 |
Q |
| |
|
| ||||| |||||||||| ||||||||| |||| |||| | |||||||| ||||||| ||||||| |
|
|
| T |
18935215 |
tcggcaagtttgaaaagttcggggtttgtctcaggttatgagaatgactaagattaagaaacttcagct |
18935147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 338
Target Start/End: Original strand, 34724638 - 34724906
Alignment:
| Q |
70 |
gtccttttccaacttgtcgatatttaaacaaccagaaagaatgagagttttcaaagattttaacttatatatgcttcttgggaggttatgtaggccaata |
169 |
Q |
| |
|
||||| |||||||||||| || ||| ||| ||||| | |||||||||||| | || || || ||||| ||||||||||| || | | ||||| || |
|
|
| T |
34724638 |
gtcctcttccaacttgtcaatttttgtacatccagacacaatgagagtttttactgacttcaatttatagatgcttcttggaagctcacaaaggcctgta |
34724737 |
T |
|
| Q |
170 |
caatcttccaaatttatcagaagaattttgttgagatgtccaatgctaggagaaatctcggaaagacttggacaatctaagagtactagcttttcaagat |
269 |
Q |
| |
|
|| |||| ||||||||||| |||||||| ||||||| ||| || ||||||||| ||| | | ||||||||||| ||||| || ||||||||||| |
|
|
| T |
34724738 |
cagtctttcaaatttatcaatagaattttcttgagatttcctatattaggagaaactgaggacaaatttggacaatctttgagtattaacttttcaagat |
34724837 |
T |
|
| Q |
270 |
taggcaaatttgaaaagtcaggggtttgtgtcagaaaatgacagtgactaagtttaagaattttcagct |
338 |
Q |
| |
|
| ||||| | ||||||||| || |||||| ||| |||| | |||||||| ||||||| |||||||| |
|
|
| T |
34724838 |
ttggcaagtatgaaaagtctggtgtttgtttcaagttatgagaatgactaagattaagaaatttcagct |
34724906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 64; Significance: 2e-27; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 22584214 - 22584401
Alignment:
| Q |
18 |
ttattgcagtgttatctgcaagcagggtggttaaggattccatttgatcctagtccttttccaacttgtcgatatttaaacaaccagaaagaatgagagt |
117 |
Q |
| |
|
|||||||||| | || ||||||||| |||||||| ||||||||||| ||| |||||| ||||||||| | | ||| |||| ||||||||||||||||| |
|
|
| T |
22584214 |
ttattgcagtttcatttgcaagcagagtggttaaagattccatttgttccaagtcctcttccaacttataaagtttttaacagccagaaagaatgagagt |
22584313 |
T |
|
| Q |
118 |
tttcaaagattttaacttatatatgcttcttgggaggttatgtaggccaatacaatcttccaaatttatcagaagaattttgttgaga |
205 |
Q |
| |
|
|||||||||||| ||||| || ||| ||||||||||| || |||| | ||| |||| ||||||||| ||||||| | |||||||| |
|
|
| T |
22584314 |
tttcaaagatttcaacttgtagatgtttcttgggaggctacaaaggcttaaacagtcttgcaaatttattagaagaactctgttgaga |
22584401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 34; Significance: 0.000000002; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 129
Target Start/End: Original strand, 3286693 - 3286746
Alignment:
| Q |
76 |
ttccaacttgtcgatatttaaacaaccagaaagaatgagagttttcaaagattt |
129 |
Q |
| |
|
|||||||||||| || ||| ||||||||||||| |||||||| ||||||||||| |
|
|
| T |
3286693 |
ttccaacttgtcaatctttgaacaaccagaaaggatgagagtgttcaaagattt |
3286746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 129
Target Start/End: Original strand, 3262804 - 3262857
Alignment:
| Q |
76 |
ttccaacttgtcgatatttaaacaaccagaaagaatgagagttttcaaagattt |
129 |
Q |
| |
|
|||||| ||||| || ||| | ||||||||||| |||||||||||||||||||| |
|
|
| T |
3262804 |
ttccaatttgtcaatctttgagcaaccagaaagtatgagagttttcaaagattt |
3262857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 141
Target Start/End: Complemental strand, 13808728 - 13808663
Alignment:
| Q |
76 |
ttccaacttgtcgatatttaaacaaccagaaagaatgagagttttcaaagattttaacttatatat |
141 |
Q |
| |
|
|||||||||||| || ||| |||||||||||| || ||||||||||| ||||| |||| |||||| |
|
|
| T |
13808728 |
ttccaacttgtcaatctttgaacaaccagaaaagattagagttttcaatgatttcaactgatatat |
13808663 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0373 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0373
Description:
Target: scaffold0373; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 333
Target Start/End: Complemental strand, 9610 - 9456
Alignment:
| Q |
179 |
aaatttatcagaagaattttgttgagatgtccaatgctaggagaaatctcggaaagacttggacaatctaagagtactagcttttcaagattaggcaaat |
278 |
Q |
| |
|
|||||||||||||||| ||| | |||| |||||||||| | || | | | || | ||||||||| ||| ||||||||||||||||||||| |||| || |
|
|
| T |
9610 |
aaatttatcagaagaagtttatggagagatccaatgctatgggagaccgcagacaaacttggacagtctttgagtactagcttttcaagattcggcatat |
9511 |
T |
|
| Q |
279 |
ttgaaaagtcaggggtttgtgtcagaaaatgacagtgactaagtttaagaatttt |
333 |
Q |
| |
|
||| ||||| || |||| |||| | ||| | |||||||| ||||||||||| |
|
|
| T |
9510 |
atgagaagtctggagtttcagtcaaatcctgagaatgactaagattaagaatttt |
9456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0552 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0552
Description:
Target: scaffold0552; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 8502 - 8563
Alignment:
| Q |
235 |
acttggacaatctaagagtactagcttttcaagattaggcaaatttgaaaagtcaggggttt |
296 |
Q |
| |
|
||||||||||| | ||||||||||||||||||||| ||||| | || |||||| ||||||| |
|
|
| T |
8502 |
acttggacaatttttgagtactagcttttcaagatttggcaagtatgtaaagtctggggttt |
8563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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