View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0752-Insertion-22 (Length: 462)
Name: NF0752-Insertion-22
Description: NF0752
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF0752-Insertion-22 |
 |  |
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[»] chr1 (10 HSPs) |
 |  |
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[»] chr2 (6 HSPs) |
 |  |
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[»] chr4 (11 HSPs) |
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[»] chr8 (11 HSPs) |
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[»] chr6 (4 HSPs) |
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[»] scaffold0007 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 395; Significance: 0; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 395; E-Value: 0
Query Start/End: Original strand, 8 - 451
Target Start/End: Complemental strand, 40644527 - 40644084
Alignment:
Q |
8 |
atgcaatgagaacatctcagctcaagatgatgaatacaaggtatcatttcagtttcaaaagtcaaattaaagatacttgttacattttggatatcattta |
107 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
40644527 |
atgcaatgagaacatctcagctcaagatgatgaatacaaggtatcatttcagtttcaaaagtcaaattaaagatacttgttacattttggatatcattta |
40644428 |
T |
 |
Q |
108 |
ctcacatgtacatgcttcatgcaggacgctatggagaaattgttgaaattcgatgttgacaatggtgacttgaaccnnnnnnncgaggatatattctgca |
207 |
Q |
|
|
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
T |
40644427 |
ctcacatacacatgtttcatgcaggacgctatggagaaattgttgaaattcgatgttgacaatggtgacttgaacctttttttcgaggatatattctgca |
40644328 |
T |
 |
Q |
208 |
gttcctgatacatcataagttcataaccaaggcatttgcttatagttttcaacaaggagtgaatatatatgctttccttattgacttttttatttcctct |
307 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
T |
40644327 |
attcctgatacatcataagttcataaccaaggcatttgcttatagttttcaacaaggagtgtatatatatgctttccttattgacttttttatttcctct |
40644228 |
T |
 |
Q |
308 |
gtctattttgtttactgcttggattcatatattaacttgtatgtttggttttttatggtatttctcgatggattttggaggggaggacttacttttctct |
407 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
T |
40644227 |
gtctattttgtttactgcttggattcatatattaacttgtatgtttggttttttatggtatttcttgatggattttggaggggaggacttacttttctct |
40644128 |
T |
 |
Q |
408 |
tttgaattacggacactataaaatattttttaaaatcaattaag |
451 |
Q |
|
|
|||||||||||||||||||||||| ||||||||||||||||||| |
|
|
T |
40644127 |
tttgaattacggacactataaaatcttttttaaaatcaattaag |
40644084 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 462
Target Start/End: Original strand, 10650464 - 10650543
Alignment:
Q |
384 |
ggaggggaggacttacttttctcttttgaattacggacactataaaatattttt-taaaatcaattaagtttgattgaag |
462 |
Q |
|
|
||||||||||| |||||||| |||| ||||||||||||||| |||| ||||| |||||| |||||||| ||||||||| |
|
|
T |
10650464 |
ggaggggaggatttactttttatttttaaattacggacactatgaaatgtttttctaaaataaattaagtgtgattgaag |
10650543 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 442
Target Start/End: Complemental strand, 1658022 - 1657964
Alignment:
Q |
384 |
ggaggggaggacttacttttctcttttgaattacggacactataaaatattttttaaaa |
442 |
Q |
|
|
|||||||||| ||||||||| |||| |||||||||||||||||||| |||||||||| |
|
|
T |
1658022 |
ggaggggagggtttacttttcatttttaaattacggacactataaaatgttttttaaaa |
1657964 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 439
Target Start/End: Original strand, 14245123 - 14245178
Alignment:
Q |
384 |
ggaggggaggacttacttttctcttttgaattacggacactataaaatatttttta |
439 |
Q |
|
|
||||||||||| |||||||||| |||| ||||||||||||| | |||| ||||||| |
|
|
T |
14245123 |
ggaggggaggatttacttttcttttttaaattacggacactgtgaaatgtttttta |
14245178 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 34981019 - 34980972
Alignment:
Q |
384 |
ggaggggaggacttacttttctcttttgaattacggacactataaaat |
431 |
Q |
|
|
|||||||||||||||||||||| |||| ||||| ||||| |||||||| |
|
|
T |
34981019 |
ggaggggaggacttacttttcttttttaaattatggacattataaaat |
34980972 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 461
Target Start/End: Original strand, 14953937 - 14953985
Alignment:
Q |
412 |
aattacggacactataaaatattttttaaaatcaattaagtttgattgaa |
461 |
Q |
|
|
||||||||||||||||| || |||| ||||||||||||||| |||||||| |
|
|
T |
14953937 |
aattacggacactataagatgtttt-taaaatcaattaagtgtgattgaa |
14953985 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 452
Target Start/End: Original strand, 25627770 - 25627826
Alignment:
Q |
396 |
ttacttttctcttttgaattacggacactataaaatattttttaaaatcaattaagt |
452 |
Q |
|
|
|||| |||||||||| ||||| | | |||||||||| ||||||||||||||||||| |
|
|
T |
25627770 |
ttacctttctcttttaaattatgaatactataaaatgatttttaaaatcaattaagt |
25627826 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 50; Significance: 2e-19; HSPs: 10)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 381 - 462
Target Start/End: Original strand, 27739084 - 27739165
Alignment:
Q |
381 |
tttggaggggaggacttacttttctcttttgaattacggacactataaaatattttttaaaatcaattaagtttgattgaag |
462 |
Q |
|
|
||||||||||||| |||||||||||||||| ||||| | |||||||||| |||||||||||||||||||| ||||||||| |
|
|
T |
27739084 |
tttggaggggagggcttacttttctcttttaaattataaatactataaaatgttttttaaaatcaattaagtgtgattgaag |
27739165 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 374 - 439
Target Start/End: Original strand, 525127 - 525190
Alignment:
Q |
374 |
gatggattttggaggggaggacttacttttctcttttgaattacggacactataaaatatttttta |
439 |
Q |
|
|
||||||||| ||||||||||| |||||||||| |||| ||||||||||| ||||||||| |||||| |
|
|
T |
525127 |
gatggatttaggaggggagga-ttacttttcttttttaaattacggaca-tataaaataattttta |
525190 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 391 - 448
Target Start/End: Complemental strand, 18373891 - 18373834
Alignment:
Q |
391 |
aggacttacttttctcttttgaattacggacactataaaatattttttaaaatcaatt |
448 |
Q |
|
|
|||||||||||||||||| | |||||||||| |||||||| ||||||||| |||||| |
|
|
T |
18373891 |
aggacttacttttctcttatatattacggacagtataaaatgttttttaaagtcaatt |
18373834 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 452
Target Start/End: Original strand, 25541939 - 25541990
Alignment:
Q |
400 |
ttttctcttttgaattacggacactataaaatattttttaaaatcaattaagt |
452 |
Q |
|
|
||||||||||| ||||| |||||||||||||| ||||||||||||||||||| |
|
|
T |
25541939 |
ttttctcttttaaattatagacactataaaata-tttttaaaatcaattaagt |
25541990 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 462
Target Start/End: Complemental strand, 42742483 - 42742440
Alignment:
Q |
419 |
gacactataaaatattttttaaaatcaattaagtttgattgaag |
462 |
Q |
|
|
||||||||||||| ||||||||||| |||||||| ||||||||| |
|
|
T |
42742483 |
gacactataaaatgttttttaaaataaattaagtgtgattgaag |
42742440 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 442
Target Start/End: Complemental strand, 8529996 - 8529950
Alignment:
Q |
396 |
ttacttttctcttttgaattacggacactataaaatattttttaaaa |
442 |
Q |
|
|
||||||||| |||| ||||||||||||||| ||||||||||||||| |
|
|
T |
8529996 |
ttacttttcatttttaaattacggacactatgaaatattttttaaaa |
8529950 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 442
Target Start/End: Complemental strand, 41498613 - 41498555
Alignment:
Q |
384 |
ggaggggaggacttacttttctcttttgaattacggacactataaaatattttttaaaa |
442 |
Q |
|
|
||||||||||| ||||||||| |||| ||||||||||||||| |||| |||| ||||| |
|
|
T |
41498613 |
ggaggggaggatttacttttcatttttaaattacggacactatgaaatgttttataaaa |
41498555 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 461
Target Start/End: Complemental strand, 51303769 - 51303707
Alignment:
Q |
399 |
cttttctcttttgaattacggacactataaaatattttttaaaatcaattaagtttgattgaa |
461 |
Q |
|
|
||||||| ||| ||||| | |||||||||||| |||||| ||||||||||||| |||||||| |
|
|
T |
51303769 |
cttttctttttaaaattatgaacactataaaatgtttttttaaatcaattaagtgtgattgaa |
51303707 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 438
Target Start/End: Complemental strand, 41676489 - 41676436
Alignment:
Q |
385 |
gaggggaggacttacttttctcttttgaattacggacactataaaatatttttt |
438 |
Q |
|
|
||||||||| ||||||||| |||| |||||||||||||||||||| |||||| |
|
|
T |
41676489 |
gaggggagggtttacttttcatttttaaattacggacactataaaatgtttttt |
41676436 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 461
Target Start/End: Original strand, 46218055 - 46218121
Alignment:
Q |
393 |
gacttacttttctcttttgaattacggacactataaaatattttttaaaatcaattaagtttgattgaa |
461 |
Q |
|
|
||||||||||||| || | |||||| || |||||||||||||||| ||||||||||||| | |||||| |
|
|
T |
46218055 |
gacttacttttcttttataaattacagagactataaaatattttt--aaatcaattaagtgtaattgaa |
46218121 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 47; Significance: 1e-17; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 388 - 462
Target Start/End: Complemental strand, 21662413 - 21662339
Alignment:
Q |
388 |
gggaggacttacttttctcttttgaattacggacactataaaatattttttaaaatcaattaagtttgattgaag |
462 |
Q |
|
|
|||||| |||||||||||||||| || || |||||| |||||| |||||||||||||||||||||||||||||| |
|
|
T |
21662413 |
gggaggccttacttttctcttttaaagtatagacactgtaaaatgttttttaaaatcaattaagtttgattgaag |
21662339 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 383 - 452
Target Start/End: Complemental strand, 14196879 - 14196810
Alignment:
Q |
383 |
tggaggggaggacttacttttctcttttgaattacggacactataaaatattttttaaaatcaattaagt |
452 |
Q |
|
|
||||||||||| ||||||||||| |||| ||||||| |||||||||||| ||||||||||| || ||||| |
|
|
T |
14196879 |
tggaggggagggcttacttttcttttttaaattacgaacactataaaatgttttttaaaataaactaagt |
14196810 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 461
Target Start/End: Original strand, 18811363 - 18811441
Alignment:
Q |
383 |
tggaggggaggacttacttttctcttttgaattacggacactataaaatattttttaaaatcaattaagtttgattgaa |
461 |
Q |
|
|
||||||| | ||||||||||||| |||| |||||| | |||||||| | ||||||||||| |||||||| |||||||| |
|
|
T |
18811363 |
tggagggaatgacttacttttcttttttaaattacagtaactataaagtgttttttaaaataaattaagtgtgattgaa |
18811441 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 442
Target Start/End: Original strand, 31795804 - 31795863
Alignment:
Q |
384 |
ggaggggaggacttacttttctcttttgaattacggacactat-aaaatattttttaaaa |
442 |
Q |
|
|
||||||||||||||||||||| |||| ||||||||||||||| |||| |||||||||| |
|
|
T |
31795804 |
ggaggggaggacttacttttcgtttttaaattacggacactatgaaaagtttttttaaaa |
31795863 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 462
Target Start/End: Original strand, 31086553 - 31086619
Alignment:
Q |
396 |
ttacttttctcttttgaattacggacactataaaatattttttaaaatcaattaagtttgattgaag |
462 |
Q |
|
|
||||||||||||||| |||||| | | | |||||| |||||||||||||| ||||| ||||||||| |
|
|
T |
31086553 |
ttacttttctcttttaaattacatatattttaaaatgttttttaaaatcaactaagtgtgattgaag |
31086619 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 462
Target Start/End: Original strand, 12541813 - 12541880
Alignment:
Q |
397 |
tacttttctcttttgaattacggacactataaaatattttt--taaaatcaattaagtttgattgaag |
462 |
Q |
|
|
||||||||| |||| |||||||||| |||||||||||||| |||||| |||||||| |||||||| |
|
|
T |
12541813 |
tacttttcttttttaaattacggactatataaaatattttttctaaaataaattaagtgcgattgaag |
12541880 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 45; Significance: 2e-16; HSPs: 11)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 462
Target Start/End: Original strand, 11842346 - 11842421
Alignment:
Q |
386 |
aggggaggacttacttttctcttttgaattacggacactataaaatattttttaaaatcaattaagtttgattgaag |
462 |
Q |
|
|
|||||||||||||||||||| ||| |||||| |||||||||||||||||||| |||| |||||||| ||||||||| |
|
|
T |
11842346 |
aggggaggacttacttttctttttcaaattacagacactataaaatatttttt-aaatgaattaagtctgattgaag |
11842421 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 379 - 450
Target Start/End: Original strand, 45904580 - 45904650
Alignment:
Q |
379 |
attttggaggggaggacttacttttctcttttgaattacggacactataaaatattttttaaaatcaattaa |
450 |
Q |
|
|
|||||| ||||||||||||| |||||||||| ||||||||| ||||||||||| |||||||||||||||| |
|
|
T |
45904580 |
attttgtaggggaggacttatatttctcttttaaattacggatactataaaata-cttttaaaatcaattaa |
45904650 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 384 - 461
Target Start/End: Original strand, 49936194 - 49936271
Alignment:
Q |
384 |
ggaggggaggacttacttttctcttttgaattacggacactataaaatattttttaaaatcaattaagtttgattgaa |
461 |
Q |
|
|
||||||||| ||| ||||||| |||| |||||||||||||||| || |||||| ||||||||||||| |||||||| |
|
|
T |
49936194 |
ggaggggagtgcttgcttttcttttttaaattacggacactatatgatgtttttttaaatcaattaagtgtgattgaa |
49936271 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 380 - 443
Target Start/End: Original strand, 23813132 - 23813195
Alignment:
Q |
380 |
ttttggaggggaggacttacttttctcttttgaattacggacactataaaatattttttaaaat |
443 |
Q |
|
|
||||||||| ||||||||||||||| | || |||||||||||||||||||| ||||| ||||| |
|
|
T |
23813132 |
ttttggaggagaggacttacttttcattgttaaattacggacactataaaatgtttttgaaaat |
23813195 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 384 - 452
Target Start/End: Original strand, 47694384 - 47694453
Alignment:
Q |
384 |
ggaggggaggacttactttt-ctcttttgaattacggacactataaaatattttttaaaatcaattaagt |
452 |
Q |
|
|
|||||||||| ||||||||| ||||||| ||||||||||||||| |||| ||| |||||||||| |||| |
|
|
T |
47694384 |
ggaggggagggcttactttttctcttttaaattacggacactatgaaatgctttctaaaatcaatcaagt |
47694453 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 440
Target Start/End: Original strand, 21694929 - 21694981
Alignment:
Q |
388 |
gggaggacttacttttctcttttgaattacggacactataaaatattttttaa |
440 |
Q |
|
|
|||||| ||||||||||| |||| |||||||||||||||||||| ||||||| |
|
|
T |
21694929 |
gggagggcttacttttcttttttaaattacggacactataaaatggtttttaa |
21694981 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 452
Target Start/End: Complemental strand, 42201257 - 42201217
Alignment:
Q |
412 |
aattacggacactataaaatattttttaaaatcaattaagt |
452 |
Q |
|
|
||||| |||||||||||||||||||||||||| |||||||| |
|
|
T |
42201257 |
aattatggacactataaaatattttttaaaataaattaagt |
42201217 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 450
Target Start/End: Original strand, 45911325 - 45911380
Alignment:
Q |
394 |
acttacttttctcttttgaattacggacactataaaatattttttaaaatcaattaa |
450 |
Q |
|
|
|||||||||||| |||| ||||||||| ||||||||||| |||||||||| |||||| |
|
|
T |
45911325 |
acttacttttcttttttaaattacggatactataaaata-tttttaaaattaattaa |
45911380 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 439
Target Start/End: Complemental strand, 55080784 - 55080733
Alignment:
Q |
388 |
gggaggacttacttttctcttttgaattacggacactataaaatatttttta |
439 |
Q |
|
|
|||||||||||||||||| |||| ||||||| ||| ||||||||| |||||| |
|
|
T |
55080784 |
gggaggacttacttttcttttttaaattacgaacattataaaataattttta |
55080733 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 431
Target Start/End: Complemental strand, 22186926 - 22186881
Alignment:
Q |
386 |
aggggaggacttacttttctcttttgaattacggacactataaaat |
431 |
Q |
|
|
||||||||||| |||||||| |||| ||||||||||| |||||||| |
|
|
T |
22186926 |
aggggaggactcacttttcttttttaaattacggacattataaaat |
22186881 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 460
Target Start/End: Complemental strand, 56427085 - 56427032
Alignment:
Q |
407 |
ttttgaattacggacactataaaatattttttaaaatcaattaagtttgattga |
460 |
Q |
|
|
|||| |||||||||||||||| ||| ||| || ||||||||||||| ||||||| |
|
|
T |
56427085 |
ttttaaattacggacactatagaatgtttgtttaaatcaattaagtgtgattga |
56427032 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 44; Significance: 7e-16; HSPs: 11)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 383 - 462
Target Start/End: Complemental strand, 38198258 - 38198179
Alignment:
Q |
383 |
tggaggggaggacttacttttctcttttgaattacggacactataaaatattttttaaaatcaattaagtttgattgaag |
462 |
Q |
|
|
|||| ||||||||||||||||| |||| |||||| ||||||||||| | ||||||||||| |||||||| ||||||||| |
|
|
T |
38198258 |
tggatgggaggacttacttttcatttttaaattacagacactataaagtgttttttaaaatgaattaagtgtgattgaag |
38198179 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 377 - 442
Target Start/End: Complemental strand, 22591623 - 22591558
Alignment:
Q |
377 |
ggattttggaggggaggacttacttttctcttttgaattacggacactataaaatattttttaaaa |
442 |
Q |
|
|
||||||||||||||| |||||||||||| ||| ||||| |||||||||||||||||||| |||| |
|
|
T |
22591623 |
ggattttggaggggattacttacttttcttgtttaaattaaggacactataaaatatttttaaaaa |
22591558 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 442
Target Start/End: Complemental strand, 1281352 - 1281294
Alignment:
Q |
384 |
ggaggggaggacttacttttctcttttgaattacggacactataaaatattttttaaaa |
442 |
Q |
|
|
||||||||||| ||| ||||| |||| ||||||||||||||| ||||||||||||||| |
|
|
T |
1281352 |
ggaggggaggatttagttttcatttttaaattacggacactatgaaatattttttaaaa |
1281294 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 412 - 461
Target Start/End: Complemental strand, 36166270 - 36166221
Alignment:
Q |
412 |
aattacggacactataaaatattttttaaaatcaattaagtttgattgaa |
461 |
Q |
|
|
||||||||||| |||||||||||||| ||||||||| |||| |||||||| |
|
|
T |
36166270 |
aattacggacattataaaatatttttaaaaatcaatcaagtgtgattgaa |
36166221 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 384 - 461
Target Start/End: Complemental strand, 44114282 - 44114205
Alignment:
Q |
384 |
ggaggggaggacttacttttctcttttgaattacggacactataaaatattttttaaaatcaattaagtttgattgaa |
461 |
Q |
|
|
|||||||||||||| |||||| |||| ||||| | |||||||||| | |||| | ||||||||||||| |||||||| |
|
|
T |
44114282 |
ggaggggaggacttcattttcttttttaaattatgaacactataaactgttttcttaaatcaattaagtgtgattgaa |
44114205 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 451
Target Start/End: Original strand, 34552608 - 34552664
Alignment:
Q |
395 |
cttacttttctcttttgaattacggacactataaaatattttttaaaatcaattaag |
451 |
Q |
|
|
|||||||||||||||| ||||| ||||||||| ||| ||||||||||| ||||||| |
|
|
T |
34552608 |
cttacttttctcttttaaattattgacactatataatgttttttaaaattaattaag |
34552664 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 442
Target Start/End: Original strand, 29358398 - 29358433
Alignment:
Q |
407 |
ttttgaattacggacactataaaatattttttaaaa |
442 |
Q |
|
|
|||| ||||||||||||||||||||||||||||||| |
|
|
T |
29358398 |
ttttaaattacggacactataaaatattttttaaaa |
29358433 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 450
Target Start/End: Complemental strand, 42919909 - 42919871
Alignment:
Q |
412 |
aattacggacactataaaatattttttaaaatcaattaa |
450 |
Q |
|
|
||||||||| |||||||||||||||||||||| |||||| |
|
|
T |
42919909 |
aattacggatactataaaatattttttaaaataaattaa |
42919871 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 438
Target Start/End: Complemental strand, 10028331 - 10028278
Alignment:
Q |
385 |
gaggggaggacttacttttctcttttgaattacggacactataaaatatttttt |
438 |
Q |
|
|
||||||||| |||||||| ||||| ||||||||||||||| ||||||||||| |
|
|
T |
10028331 |
gaggggagggtttactttttacttttaaattacggacactatgaaatatttttt |
10028278 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 462
Target Start/End: Complemental strand, 30582022 - 30581940
Alignment:
Q |
384 |
ggaggggaggacttacttttctcttttgaatt----acggacactataaaatattttttaaaatcaattaagtttgattgaag |
462 |
Q |
|
|
|||||||||| ||||||||||| |||| |||| |||||||||||| ||| | |||||||| |||||||| ||||||||| |
|
|
T |
30582022 |
ggaggggagggcttacttttcttttttaaattacggacggacactatataatgtgttttaaaacaaattaagtgtgattgaag |
30581940 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 383 - 443
Target Start/End: Original strand, 26167791 - 26167851
Alignment:
Q |
383 |
tggaggggaggacttacttttctcttttgaattacggacactataaaatattttttaaaat |
443 |
Q |
|
|
|||||| || |||||| |||||| |||| ||||||||||| || |||||| |||||||||| |
|
|
T |
26167791 |
tggaggagatgacttaattttcttttttaaattacggacagtaaaaaataatttttaaaat |
26167851 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 38; Significance: 0.000000000003; HSPs: 15)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 391 - 452
Target Start/End: Complemental strand, 42283184 - 42283123
Alignment:
Q |
391 |
aggacttacttttctcttttgaattacggacactataaaatattttttaaaatcaattaagt |
452 |
Q |
|
|
|||||||||||||| ||||||||||||||||||||| |||||||| | |||||||| |||| |
|
|
T |
42283184 |
aggacttacttttcatttttgaattacggacactatagaatattttcttaaatcaatcaagt |
42283123 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 450
Target Start/End: Original strand, 44040810 - 44040859
Alignment:
Q |
401 |
tttctcttttgaattacggacactataaaatattttttaaaatcaattaa |
450 |
Q |
|
|
|||||||||| ||||||||| ||||||||||| ||||||||||||||||| |
|
|
T |
44040810 |
tttctcttttaaattacggatactataaaatagtttttaaaatcaattaa |
44040859 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 395 - 450
Target Start/End: Original strand, 33224136 - 33224191
Alignment:
Q |
395 |
cttacttttctcttttgaattacggacactataaaatattttttaaaatcaattaa |
450 |
Q |
|
|
|||||||||||||||| |||| |||||||||||||||||||| ||||||||||| |
|
|
T |
33224136 |
cttacttttctctttttaatttttgacactataaaatatttttttaaatcaattaa |
33224191 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 439
Target Start/End: Complemental strand, 48094109 - 48094047
Alignment:
Q |
377 |
ggattttggaggggaggacttacttttctcttttgaattacggacactataaaatatttttta |
439 |
Q |
|
|
|||||| ||||||||||| |||||||||| |||| ||||||| || ||||||||| ||||||| |
|
|
T |
48094109 |
ggatttaggaggggaggatttacttttcttttttaaattacgaacgctataaaatctttttta |
48094047 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 380 - 417
Target Start/End: Original strand, 1013955 - 1013992
Alignment:
Q |
380 |
ttttggaggggaggacttacttttctcttttgaattac |
417 |
Q |
|
|
||||||||||||||||||||||||||||||| |||||| |
|
|
T |
1013955 |
ttttggaggggaggacttacttttctcttttaaattac |
1013992 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 458
Target Start/End: Complemental strand, 22599957 - 22599898
Alignment:
Q |
400 |
ttttctcttttgaattacggacactataaaatatttttt-aaaatcaattaagtttgatt |
458 |
Q |
|
|
|||||| ||||||| || ||||| ||||||||||||||| |||||||||||||| ||||| |
|
|
T |
22599957 |
ttttcttttttgaactatggacattataaaatattttttaaaaatcaattaagtgtgatt |
22599898 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 462
Target Start/End: Complemental strand, 19262051 - 19261969
Alignment:
Q |
380 |
ttttggaggggaggacttacttttctcttttgaattacggacactataaaatattttttaaaatcaattaagtttgattgaag |
462 |
Q |
|
|
|||||||||||||| |||||||||| |||| |||||| ||| || |||||| |||| ||||| |||||| | ||||||||| |
|
|
T |
19262051 |
ttttggaggggagggcttacttttcaattttaaattacagactctttaaaatgttttgaaaaataaattaattgtgattgaag |
19261969 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 442
Target Start/End: Original strand, 24970200 - 24970258
Alignment:
Q |
384 |
ggaggggaggacttacttttctcttttgaattacggacactataaaatattttttaaaa |
442 |
Q |
|
|
|||||||| || ||||||||| |||| ||||||||| ||||| ||||||||||||||| |
|
|
T |
24970200 |
ggaggggatgatttacttttcatttttaaattacggatactatgaaatattttttaaaa |
24970258 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 30592292 - 30592346
Alignment:
Q |
388 |
gggaggacttacttttctcttttgaattacggacactataaaatattttttaaaa |
442 |
Q |
|
|
|||||| ||||||||||| |||| |||||| ||||||||||||| ||||||||| |
|
|
T |
30592292 |
gggagggcttacttttcttttttaaattacagacactataaaatgatttttaaaa |
30592346 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 442
Target Start/End: Original strand, 40196579 - 40196625
Alignment:
Q |
396 |
ttacttttctcttttgaattacggacactataaaatattttttaaaa |
442 |
Q |
|
|
||||||||| ||||||||||||||||||||||||| |||| ||||| |
|
|
T |
40196579 |
ttacttttcatttttgaattacggacactataaaatgttttataaaa |
40196625 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 442
Target Start/End: Original strand, 2087783 - 2087832
Alignment:
Q |
393 |
gacttacttttctcttttgaattacggacactataaaatattttttaaaa |
442 |
Q |
|
|
||||||||||||| |||| ||||||||| | ||||||||| ||||||||| |
|
|
T |
2087783 |
gacttacttttcttttttaaattacggatattataaaataatttttaaaa |
2087832 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 458
Target Start/End: Complemental strand, 39417576 - 39417503
Alignment:
Q |
385 |
gaggggaggacttacttttctcttttgaattacggacactataaaatattttttaaaatcaattaagtttgatt |
458 |
Q |
|
|
||||||||| |||||| ||| |||| |||||| |||||||||||| |||||| |||||||||||| ||||| |
|
|
T |
39417576 |
gaggggagggtttacttctcttttttcaattacaaacactataaaatgttttttttaatcaattaagtatgatt |
39417503 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 437
Target Start/End: Original strand, 48881593 - 48881646
Alignment:
Q |
384 |
ggaggggaggacttacttttctcttttgaattacggacactataaaatattttt |
437 |
Q |
|
|
|||||||| | ||||||||||| |||| ||||||||||| ||||||||| |||| |
|
|
T |
48881593 |
ggaggggatggcttacttttcttttttaaattacggacattataaaataatttt |
48881646 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 383 - 462
Target Start/End: Complemental strand, 34124953 - 34124877
Alignment:
Q |
383 |
tggaggggaggacttacttttctcttttgaattacggacactataaaatattttttaaaatcaattaagtttgattgaag |
462 |
Q |
|
|
||||||||||| || |||||||| ||| ||||| ||||||||||||||| ||||||||| |||||||| ||| ||||| |
|
|
T |
34124953 |
tggaggggagggctaacttttcttcttt-aattatggacactataaaata--ttttaaaattaattaagtgtgactgaag |
34124877 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 407 - 443
Target Start/End: Complemental strand, 47391042 - 47391006
Alignment:
Q |
407 |
ttttgaattacggacactataaaatattttttaaaat |
443 |
Q |
|
|
|||| ||||||||||||||||||| |||||||||||| |
|
|
T |
47391042 |
ttttaaattacggacactataaaacattttttaaaat |
47391006 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 16509322 - 16509394
Alignment:
Q |
390 |
gaggacttacttttctcttttgaattacggacactataaaatattttttaaaatcaattaagtttgattgaag |
462 |
Q |
|
|
|||| ||||||||||| |||||||||| ||||||||||||| ||||| ||||| ||| |||| ||||||||| |
|
|
T |
16509322 |
gagggcttacttttcttttttgaattaaagacactataaaatgtttttaaaaataaatcaagtgtgattgaag |
16509394 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 443
Target Start/End: Complemental strand, 10818425 - 10818366
Alignment:
Q |
384 |
ggaggggaggacttacttttctcttttgaattacggacactataaaatattttttaaaat |
443 |
Q |
|
|
|||||||||| ||||||||| |||| ||||||||||||||| |||| ||||||||||| |
|
|
T |
10818425 |
ggaggggagggtttacttttcatttttaaattacggacactatgaaatgttttttaaaat |
10818366 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 443
Target Start/End: Original strand, 30849949 - 30850008
Alignment:
Q |
384 |
ggaggggaggacttacttttctcttttgaattacggacactataaaatattttttaaaat |
443 |
Q |
|
|
||||||||||| |||| |||| |||| ||||||| | |||||||||||||||||||||| |
|
|
T |
30849949 |
ggaggggaggatttacatttcgtttttaaattacgcatactataaaatattttttaaaat |
30850008 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 442
Target Start/End: Original strand, 19278081 - 19278127
Alignment:
Q |
396 |
ttacttttctcttttgaattacggacactataaaatattttttaaaa |
442 |
Q |
|
|
||||||||| |||| |||||| |||||||||||||||||||||||| |
|
|
T |
19278081 |
ttacttttcatttttaaattactgacactataaaatattttttaaaa |
19278127 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 37; Significance: 0.00000000001; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 430
Target Start/End: Complemental strand, 1816103 - 1816051
Alignment:
Q |
378 |
gattttggaggggaggacttacttttctcttttgaattacggacactataaaa |
430 |
Q |
|
|
|||||||||||||||||||||||||||| |||| ||||| ||||| ||||||| |
|
|
T |
1816103 |
gattttggaggggaggacttacttttctattttaaattaaggacattataaaa |
1816051 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 431
Target Start/End: Original strand, 25179926 - 25179976
Alignment:
Q |
381 |
tttggaggggaggacttacttttctcttttgaattacggacactataaaat |
431 |
Q |
|
|
|||||||||||||||||||||||| |||| ||||| |||||||||||||| |
|
|
T |
25179926 |
tttggaggggaggacttacttttcatttttaaattatggacactataaaat |
25179976 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 462
Target Start/End: Original strand, 49815453 - 49815535
Alignment:
Q |
380 |
ttttggaggggaggacttacttttctcttttgaattacggacactataaaatattttttaaaatcaattaagtttgattgaag |
462 |
Q |
|
|
|||||||||||||| ||||||||||| |||| |||||| |||||||||| ||||| ||||| ||||||| ||||||||| |
|
|
T |
49815453 |
ttttggaggggagggcttacttttcttttttaaattacaagtactataaaatgtttttaaaaataaattaagcgtgattgaag |
49815535 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 34641199 - 34641152
Alignment:
Q |
384 |
ggaggggaggacttacttttctcttttgaattacggacactataaaat |
431 |
Q |
|
|
|||||||||| ||||||||||| |||| ||||||||||| |||||||| |
|
|
T |
34641199 |
ggaggggagggcttacttttcttttttaaattacggacattataaaat |
34641152 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 462
Target Start/End: Complemental strand, 45663329 - 45663274
Alignment:
Q |
407 |
ttttgaattacggacactataaaatattttttaaaatcaattaagtttgattgaag |
462 |
Q |
|
|
|||| ||||||||||| |||||||||||||||||||| ||||| | ||||||||| |
|
|
T |
45663329 |
ttttcaattacggacaatataaaatattttttaaaataaattatatgtgattgaag |
45663274 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 418 - 462
Target Start/End: Original strand, 34938736 - 34938780
Alignment:
Q |
418 |
ggacactataaaatattttttaaaatcaattaagtttgattgaag |
462 |
Q |
|
|
||||||||||||||||||||| |||| |||||||| | ||||||| |
|
|
T |
34938736 |
ggacactataaaatatttttttaaatgaattaagtataattgaag |
34938780 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0007 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0007
Description:
Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 442
Target Start/End: Complemental strand, 242425 - 242367
Alignment:
Q |
384 |
ggaggggaggacttacttttctcttttgaattacggacactataaaatattttttaaaa |
442 |
Q |
|
|
|||||||||| |||||||||| |||| ||||||||||| |||||||| ||||||||| |
|
|
T |
242425 |
ggaggggagggtttacttttcttttttaaattacggacattataaaatgatttttaaaa |
242367 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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