View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0752-Insertion-4 (Length: 892)

Name: NF0752-Insertion-4
Description: NF0752
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0752-Insertion-4
NF0752-Insertion-4
[»] chr1 (11 HSPs)
chr1 (8-892)||(16294197-16295086)
chr1 (769-844)||(16294049-16294124)
chr1 (770-835)||(7473792-7473857)
chr1 (794-883)||(17606568-17606659)
chr1 (794-844)||(34749407-34749458)
chr1 (798-829)||(43539376-43539407)
chr1 (794-879)||(17606329-17606422)
chr1 (794-879)||(4907226-4907315)
chr1 (813-883)||(20995928-20996001)
chr1 (20-65)||(32965332-32965377)
chr1 (794-835)||(42510327-42510368)
[»] chr2 (7 HSPs)
chr2 (769-883)||(33290049-33290167)
chr2 (769-834)||(13284726-13284791)
chr2 (794-879)||(26135842-26135931)
chr2 (794-844)||(15106369-15106418)
chr2 (794-844)||(17850612-17850662)
chr2 (783-844)||(21482182-21482243)
chr2 (794-879)||(30390484-30390573)
[»] chr8 (10 HSPs)
chr8 (794-883)||(10108630-10108723)
chr8 (769-843)||(22848549-22848624)
chr8 (794-883)||(14820554-14820647)
chr8 (794-879)||(30789533-30789621)
chr8 (794-843)||(42113010-42113059)
chr8 (794-844)||(2583345-2583396)
chr8 (794-883)||(21147961-21148055)
chr8 (769-843)||(40486629-40486703)
chr8 (794-883)||(5555129-5555222)
chr8 (794-883)||(21144765-21144858)
[»] chr4 (8 HSPs)
chr4 (794-879)||(9516635-9516724)
chr4 (794-844)||(9397001-9397051)
chr4 (794-880)||(13132204-13132292)
chr4 (794-835)||(43312234-43312275)
chr4 (794-879)||(38573994-38574082)
chr4 (794-883)||(3018272-3018363)
chr4 (763-879)||(36888944-36889062)
chr4 (794-883)||(37012732-37012825)
[»] chr3 (8 HSPs)
chr3 (794-883)||(14262061-14262154)
chr3 (794-883)||(30500068-30500159)
chr3 (758-843)||(36990963-36991047)
chr3 (758-843)||(37016403-37016487)
chr3 (794-883)||(14162131-14162223)
chr3 (794-879)||(30500305-30500393)
chr3 (794-883)||(19112789-19112883)
chr3 (794-883)||(5800865-5800957)
[»] chr5 (6 HSPs)
chr5 (794-883)||(7125943-7126035)
chr5 (769-879)||(22571077-22571191)
chr5 (794-844)||(41001655-41001705)
chr5 (794-883)||(14144161-14144254)
chr5 (793-835)||(18336491-18336533)
chr5 (793-883)||(31799664-31799758)
[»] chr6 (2 HSPs)
chr6 (794-844)||(3230164-3230215)
chr6 (793-879)||(18500339-18500428)
[»] chr7 (6 HSPs)
chr7 (794-844)||(10409676-10409726)
chr7 (794-844)||(12006566-12006616)
chr7 (793-879)||(20419560-20419650)
chr7 (794-844)||(20963796-20963846)
chr7 (794-879)||(12006804-12006893)
chr7 (794-879)||(38879988-38880074)
[»] scaffold0361 (2 HSPs)
scaffold0361 (794-879)||(4827-4915)
scaffold0361 (794-835)||(4587-4628)
[»] scaffold0220 (1 HSPs)
scaffold0220 (769-844)||(26479-26553)
[»] scaffold0352 (1 HSPs)
scaffold0352 (795-879)||(5942-6031)


Alignment Details
Target: chr1 (Bit Score: 802; Significance: 0; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 802; E-Value: 0
Query Start/End: Original strand, 8 - 892
Target Start/End: Complemental strand, 16295086 - 16294197
Alignment:
Q  8 ggtataactcttagtttctcatcttcttgaaactcactcaaacaaaaagcacattcactagagattcctaattcaccataatctttctctagtttgtaat 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16295086 ggtataactcttagtttctcatcttcttgaaactcactcaaacaaaaagcacattcactagagattcctaattcaccataatctttctctagtttgtaat 16294987  T
Q  108 gaatcaccggaattgaattaatcaccgattgttctaatcctctatgatccgatgtcatcgagtatgacgtagattgttcttcatgttgtcttgaaaaaga 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16294986 gaatcaccggaattgaattaatcaccgattgttctaatcctctatgatccgatgtcatcgagtatgacgtagattgttcttcatgttgtcttgaaaaaga 16294887  T
Q  208 aaaacgtcttcctctatcaagatcaatattgttccaattgaagcagcatttgataacaaaggtgtagtatgccattagcaagaaagatgttaccatcatt 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16294886 aaaacgtcttcctctatcaagatcaatattgttccaattgaagcagcatttgataacaaaggtgtagtatgccattagcaagaaagatgttaccatcatt 16294787  T
Q  308 cctactacaatgactactattggaaaatttgtactagaatcatgatgattttggataggtggatgagcttgtgacacattatagatgatcaagtgatgtt 407  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  16294786 cctactacaatgattactattggaaaatttgtactagaatcatgatgattttggataggtggatgagcttgtgacacaggatagatgatcaagtgatgtt 16294687  T
Q  408 gtttgttaacaaaattcatactagattctagagataaaatggttgtcttagatgaagaaatggtacttttcctttgaagatttatttatagtgtgatgaa 507  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16294686 gtttgttaacaaaattcatactagattctagagataaaatggttgtcttagatgaagaaatggtacttttcctttgaagatttatttatagtgtgatgaa 16294587  T
Q  508 tgcattaattgaaagaaagtatgatttttctccaaaagtaattagagaaaaacatagaatatgagaaattagttagagtgagtgaagagaaatgaaagat 607  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16294586 tgcattaattgaaagaaagtatgatttttctccaaaagtaattagagaaaaacatagaatatgagaaattagttagagtgagtgaagagaaatgaaagat 16294487  T
Q  608 ggagaaaagtaaaaccgtgaggtggtttataaatgaggatggtggtggtgagtggacttagggttgaaaaattcaataagaagtgctgtctaacgtgttt 707  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  16294486 ggagaaaagtaaaaccgtgaggtggtttataaatgaggatggtggtggtgagtggacttagggttgaaaaattcaataagaagtgttgtctaacgtgttt 16294387  T
Q  708 tcttcgaagttcatagatgagtttatagatcaatttccattttagaaaacattaattataggggttaatactgtttttggtctcgataatattagcaaat 807  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||    
T  16294386 tcttcgaagttcatacatgagtttatagatcaatttccattttagagaacattaattataggggttaatactgtttttggtctatgtaatattagcaaat 16294287  T
Q  808 tccgattttagtccttgtaaaata-aaaatttaga-tttgtcc-tgtaattccatattcct-cacttttggtccctta-ttaaccatgtc 892  Q
    | |||||||||||| ||||||||| |||||||||| ||||||| ||||||| ||||||||| |||||||||||||||| |||||||||||    
T  16294286 ttcgattttagtccctgtaaaataaaaaatttagattttgtccttgtaatttcatattcctccacttttggtcccttatttaaccatgtc 16294197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 769 - 844
Target Start/End: Original strand, 16294049 - 16294124
Alignment:
Q  769 gggttaatactgtttttggtctcgataatattagcaaattccgattttagtccttgtaaaataaaaatttagattt 844  Q
    |||||||||| | |||||||| |  |||||||||| |||| |||||||||| ||||||||| || |||||||||||    
T  16294049 gggttaataccgattttggtccctgtaatattagcgaatttcgattttagttcttgtaaaaaaataatttagattt 16294124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 770 - 835
Target Start/End: Original strand, 7473792 - 7473857
Alignment:
Q  770 ggttaatactgtttttggtctcgataatattagcaaattccgattttagtccttgtaaaataaaaa 835  Q
    |||||||||||||||||||| | |||||||||||||| |||  |||||| || ||||||| |||||    
T  7473792 ggttaatactgtttttggtccctataatattagcaaactccagttttagcccctgtaaaaaaaaaa 7473857  T

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Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 794 - 883
Target Start/End: Complemental strand, 17606659 - 17606568
Alignment:
Q  794 taatattagcaaattccgattttagtccttgtaaaataaaaatttagattt-gtcct-gtaattccatattcctc-acttttggtcccttatt 883  Q
    |||||||||| ||||||| ||||||||| ||||||| ||| |||||||||| ||||| |||||| || |||| || |||||||||||||||||    
T  17606659 taatattagcgaattccggttttagtccctgtaaaa-aaagatttagattttgtccttgtaatttcagattcttccacttttggtcccttatt 17606568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 794 - 844
Target Start/End: Complemental strand, 34749458 - 34749407
Alignment:
Q  794 taatattagcaaattccgattttagtccttgtaaaataaaa-atttagattt 844  Q
    |||||||| | ||||||||||||||||||||||||| |||| ||||||||||    
T  34749458 taatattatcgaattccgattttagtccttgtaaaaaaaaagatttagattt 34749407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 798 - 829
Target Start/End: Original strand, 43539376 - 43539407
Alignment:
Q  798 attagcaaattccgattttagtccttgtaaaa 829  Q
    ||||||||||||||||||||||||||||||||    
T  43539376 attagcaaattccgattttagtccttgtaaaa 43539407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 794 - 879
Target Start/End: Original strand, 17606329 - 17606422
Alignment:
Q  794 taatattagcaaattccgattttagtccttgtaaaataaaa-----atttagattt--gtcctgtaattccatattcct-cacttttggtccct 879  Q
    |||||||||| ||||||||||||||||| ||||||| ||||     ||||||||||   |||||||||| ||||||| | ||||||||||||||    
T  17606329 taatattagcgaattccgattttagtccctgtaaaaaaaaaaaaagatttagattttgttcctgtaatttcatattcttccacttttggtccct 17606422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 794 - 879
Target Start/End: Complemental strand, 4907315 - 4907226
Alignment:
Q  794 taatattagcaaattccgattttagtccttgtaaaataaaa-atttaga-tttgt-cctgtaattccatattcct-cacttttggtccct 879  Q
    |||||||||| ||||||  ||||||||| |||||||||||| ||||||| ||||| ||||||||| || |||| | ||||||||||||||    
T  4907315 taatattagcgaattccagttttagtccctgtaaaataaaagatttagattttgtccctgtaatttcagattcttccacttttggtccct 4907226  T

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Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 813 - 883
Target Start/End: Complemental strand, 20996001 - 20995928
Alignment:
Q  813 ttttagtccttgtaaaataaaaatttagattt-gtc-ctgtaattccatattcctc-acttttggtcccttatt 883  Q
    ||||||||| ||||||| ||| |||||||||| ||| |||||||| ||||||| || |||||||||||||||||    
T  20996001 ttttagtccatgtaaaaaaaagatttagattttgtctctgtaatttcatattcttccacttttggtcccttatt 20995928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 32965332 - 32965377
Alignment:
Q  20 agtttctcatcttcttgaaactcactcaaacaaaaagcacattcac 65  Q
    ||||| ||||||| |||||||||| ||||||||| |||||||||||    
T  32965332 agtttttcatcttgttgaaactcattcaaacaaacagcacattcac 32965377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 794 - 835
Target Start/End: Complemental strand, 42510368 - 42510327
Alignment:
Q  794 taatattagcaaattccgattttagtccttgtaaaataaaaa 835  Q
    |||||||||| ||||||| ||||||||||||||||| |||||    
T  42510368 taatattagcgaattccggttttagtccttgtaaaaaaaaaa 42510327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 9e-20; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 769 - 883
Target Start/End: Original strand, 33290049 - 33290167
Alignment:
Q  769 gggttaatactgtttttggtctcgataatattagcaaattccgattttagtccttgtaaaat-aaaaatttagatt-tgtcc-tgtaattccatattcct 865  Q
    ||||||||||||||||||||| |  |||||||||| ||||||  ||||||||| |||||||| ||||||||||||| ||||| ||||||| |||| ||||    
T  33290049 gggttaatactgtttttggtccctgtaatattagcgaattccagttttagtccctgtaaaataaaaaatttagattctgtccttgtaatttcatactcct 33290148  T
Q  866 -cacttttggtcccttatt 883  Q
     ||||||||||||||||||    
T  33290149 ccacttttggtcccttatt 33290167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 769 - 834
Target Start/End: Complemental strand, 13284791 - 13284726
Alignment:
Q  769 gggttaatactgtttttggtctcgataatattagcaaattccgattttagtccttgtaaaataaaa 834  Q
    |||||||||||| |||||||| |  |||||||||| |||| || ||||||||| ||||||||||||    
T  13284791 gggttaatactgcttttggtccctgtaatattagcgaatttcggttttagtccctgtaaaataaaa 13284726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 794 - 879
Target Start/End: Original strand, 26135842 - 26135931
Alignment:
Q  794 taatattagcaaattccgattttagtccttgtaaaataaaa-atttaga-tttgt-cctgtaattccatattcctc-acttttggtccct 879  Q
    |||||||||| ||||||||||||||||| ||||||| |||| ||||||| ||||| ||||||||| || |||| || |||||||||||||    
T  26135842 taatattagcgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttctacttttggtccct 26135931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 794 - 844
Target Start/End: Complemental strand, 15106418 - 15106369
Alignment:
Q  794 taatattagcaaattccgattttagtccttgtaaaataaaaatttagattt 844  Q
    |||||||||| |||| |||||||||||| ||||||| ||||||||||||||    
T  15106418 taatattagcgaatttcgattttagtccctgtaaaa-aaaaatttagattt 15106369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 794 - 844
Target Start/End: Original strand, 17850612 - 17850662
Alignment:
Q  794 taatattagcaaattccgattttagtccttgtaaaataaaaatttagattt 844  Q
    |||||||||| ||||||||||||||||| | ||||| ||| ||||||||||    
T  17850612 taatattagcgaattccgattttagtccctataaaaaaaagatttagattt 17850662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 783 - 844
Target Start/End: Complemental strand, 21482243 - 21482182
Alignment:
Q  783 tttggtctcgataatattagcaaattccgattttagtccttgtaaaataaaaatttagattt 844  Q
    |||||||||  |||||||||| ||||||  ||||||||||||||||| || | |||||||||    
T  21482243 tttggtctctgtaatattagcgaattccagttttagtccttgtaaaaaaatagtttagattt 21482182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 794 - 879
Target Start/End: Original strand, 30390484 - 30390573
Alignment:
Q  794 taatattagcaaattccgattttagtccttgt-aaaataaaaatttaga-tttgt-cctgtaattccatattcct-cacttttggtccct 879  Q
    |||||||||| ||||||||||||| ||| ||| |||| ||||| ||||| ||||| ||||||||| ||||||| | ||||||||||||||    
T  30390484 taatattagcgaattccgattttaatccctgtaaaaaaaaaaaattagattttgtccctgtaatttcatattcttccacttttggtccct 30390573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 794 - 883
Target Start/End: Complemental strand, 10108723 - 10108630
Alignment:
Q  794 taatattagcaaattccgattttagtccttgtaaaataaaa-atttaga-tttgt-cctgtaattccatattcct-cacttttggtcccttatt 883  Q
    |||||||||||||||||| ||||||||| ||||||| |||| ||||||| ||||| ||||||||| ||||||| | ||||||||||||||||||    
T  10108723 taatattagcaaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccacttttggtcccttatt 10108630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 769 - 843
Target Start/End: Complemental strand, 22848624 - 22848549
Alignment:
Q  769 gggttaatactgtttttggtctcgataatattagcaaattccgattttagtccttgtaaaata-aaaatttagatt 843  Q
    |||||||||||| | | |||| |  |||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  22848624 gggttaatactgctctgggtcaccgtaatattagcgaattccgattttagtccttgtaaaataaaaaatttagatt 22848549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 794 - 883
Target Start/End: Complemental strand, 14820647 - 14820554
Alignment:
Q  794 taatattagcaaattccgattttagtccttgtaaaataaaa-atttagattt-gtcc-tgtaattccatattcctc-acttttggtcccttatt 883  Q
    |||||||||| ||||||| ||||||||| ||||||| |||| |||||||||| |||| ||||||| ||||||| || |||||||||||||||||    
T  14820647 taatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccacttttggtcccttatt 14820554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 794 - 879
Target Start/End: Original strand, 30789533 - 30789621
Alignment:
Q  794 taatattagcaaattccgattttagtccttgtaaaataaaaatttaga-tttgtc-ctgtaattccatattcct-cacttttggtccct 879  Q
    |||||||||| ||||||||||||||||| ||||||| ||| ||||||| |||||| |||||||| || |||||| |||||||| |||||    
T  30789533 taatattagcgaattccgattttagtccctgtaaaaaaaagatttagattttgtctctgtaatttcagattcctccacttttgatccct 30789621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 794 - 843
Target Start/End: Original strand, 42113010 - 42113059
Alignment:
Q  794 taatattagcaaattccgattttagtccttgtaaaataaaaatttagatt 843  Q
    |||||||||| ||||||||||||||||| ||||||| ||| |||||||||    
T  42113010 taatattagcgaattccgattttagtccctgtaaaaaaaagatttagatt 42113059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 794 - 844
Target Start/End: Original strand, 2583345 - 2583396
Alignment:
Q  794 taatattagcaaattccgattttagtccttgtaaaataaaa-atttagattt 844  Q
    |||||||||| |||| |||||||||| |||||||||||||| ||||||||||    
T  2583345 taatattagcgaatttcgattttagttcttgtaaaataaaagatttagattt 2583396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 794 - 883
Target Start/End: Original strand, 21147961 - 21148055
Alignment:
Q  794 taatattagcaaattccgattttagtccttgtaaaataaaaa--tttagattt-gtcc-tgtaattccatattcctc-acttttggtcccttatt 883  Q
    |||||||||| ||||||| ||||||||| ||||||| |||||  ||||||||| |||| ||||||| || |||| || |||||||||||||||||    
T  21147961 taatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattcttccacttttggtcccttatt 21148055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 769 - 843
Target Start/End: Original strand, 40486629 - 40486703
Alignment:
Q  769 gggttaatactgtttttggtctcgataatattagcaaattccgattttagtccttgtaaaataaaaatttagatt 843  Q
    |||||||||||  |||||||| |  |||||||| | ||||||||||||||||| || |||| |||| ||||||||    
T  40486629 gggttaatactacttttggtccctgtaatattaacgaattccgattttagtccctgcaaaaaaaaagtttagatt 40486703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 794 - 883
Target Start/End: Complemental strand, 5555222 - 5555129
Alignment:
Q  794 taatattagcaaattccgattttagtccttgtaaaataaaa-atttagattt-gtcc-tgtaattccatattcctc-acttttggtcccttatt 883  Q
    |||||||||| |||| || ||||||||  ||||||| |||| |||||||||| |||| ||||||| ||||||| || |||||||||||||||||    
T  5555222 taatattagcgaatttcggttttagtctctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccacttttggtcccttatt 5555129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 794 - 883
Target Start/End: Complemental strand, 21144858 - 21144765
Alignment:
Q  794 taatattagcaaattccgattttagtccttgtaaaata-aaaatttaga-tttgtcc-tgtaattccatattcct-cacttttggtcccttatt 883  Q
    |||||||| | ||||||||||||||||| | ||||||| |||||||||| ||||||| ||||||| || |||||| || |||| ||||||||||    
T  21144858 taatattaacgaattccgattttagtccctataaaataaaaaatttagattttgtccttgtaatttcagattcctccatttttcgtcccttatt 21144765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000005; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 794 - 879
Target Start/End: Original strand, 9516635 - 9516724
Alignment:
Q  794 taatattagcaaattccgattttagtccttgtaaaataaaa-atttaga-tttgtcc-tgtaattccatattcct-cacttttggtccct 879  Q
    |||||||||| ||||||| ||||||||||||||||| |||| ||||||| ||||||| ||||||| ||||||| | ||||||||||||||    
T  9516635 taatattagcgaattccggttttagtccttgtaaaaaaaaagatttagattttgtccttgtaatttcatattcttccacttttggtccct 9516724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 794 - 844
Target Start/End: Complemental strand, 9397051 - 9397001
Alignment:
Q  794 taatattagcaaattccgattttagtccttgtaaaataaaaatttagattt 844  Q
    |||||||||||||||||| ||||||||| ||||||| ||| ||||||||||    
T  9397051 taatattagcaaattccggttttagtccctgtaaaaaaaagatttagattt 9397001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 794 - 880
Target Start/End: Complemental strand, 13132292 - 13132204
Alignment:
Q  794 taatattagcaaattccgattttagtccttgtaaaataaaaatttagatt-tgt-cctgtaattccatattcct-cacttttggtccctt 880  Q
    |||||||||| |||| |||||||||||| ||||||| ||| ||||||||| ||| ||||||||| ||||||| | |||||||||||||||    
T  13132292 taatattagcgaatttcgattttagtcc-tgtaaaaaaaagatttagattctgtccctgtaatttcatattcttccacttttggtccctt 13132204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 794 - 835
Target Start/End: Original strand, 43312234 - 43312275
Alignment:
Q  794 taatattagcaaattccgattttagtccttgtaaaataaaaa 835  Q
    |||||||||||||||||||||||||||| ||||||| |||||    
T  43312234 taatattagcaaattccgattttagtccctgtaaaaaaaaaa 43312275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 794 - 879
Target Start/End: Original strand, 38573994 - 38574082
Alignment:
Q  794 taatattagcaaattccgattttagtccttgtaaaataaaaatttaga-tttgt-cctgtaattccatattcct-cacttttggtccct 879  Q
    |||||||||  ||||||||||||| ||| ||||||| ||| ||||||| ||||| ||||||||| ||||||| | ||||||||||||||    
T  38573994 taatattagtgaattccgattttaatccctgtaaaaaaaagatttagattttgtccctgtaatttcatattcttccacttttggtccct 38574082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 794 - 883
Target Start/End: Complemental strand, 3018363 - 3018272
Alignment:
Q  794 taatattagcaaattccgattttagtccttgtaaaataaaaatttagatttgtcc-tgtaattccatattc-ctcacttttggtcccttatt 883  Q
    |||||||| | |||| || ||||||||| ||||||| ||| |||||||||||||| ||||||| || ||||   ||||||||||||||||||    
T  3018363 taatattaacgaatttcggttttagtccctgtaaaaaaaagatttagatttgtccgtgtaatttcagattctaccacttttggtcccttatt 3018272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 763 - 879
Target Start/End: Complemental strand, 36889062 - 36888944
Alignment:
Q  763 ttataggggttaatactgtttttggtctcgataatattagcaaattccgattttagtccttgtaaaataaaaatttagatt-tgt-cctgtaattccata 860  Q
    ||||| ||||||||||   |||||||| | ||||||||||| ||||  | ||||||||| ||||||| ||||||||||||| ||| ||||||||| || |    
T  36889062 ttataagggttaataccacttttggtccctataatattagcgaattttggttttagtcc-tgtaaaaaaaaaatttagattatgtccctgtaatttcaga 36888964  T
Q  861 ttcct-cacttttggtccct 879  Q
    ||||| ||||||| ||||||    
T  36888963 ttcctccacttttagtccct 36888944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 794 - 883
Target Start/End: Original strand, 37012732 - 37012825
Alignment:
Q  794 taatattagcaaattccgattttagtccttgtaaaataaaa-atttaga-tttgt-cctgtaattccatattcct-cacttttggtcccttatt 883  Q
    |||||||||| |||||  |||| ||||||||||||| |||| ||||||| ||||| ||||||||| || |||| | ||||||||||||||||||    
T  37012732 taatattagcgaattctaatttcagtccttgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttccacttttggtcccttatt 37012825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000005; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 794 - 883
Target Start/End: Original strand, 14262061 - 14262154
Alignment:
Q  794 taatattagcaaattccgattttagtccttgtaaaataaaa-atttaga-tttgt-cctgtaattccatattcct-cacttttggtcccttatt 883  Q
    |||||||||| ||||||| ||||||||||||||||| |||| ||||||| ||||| ||||||||| || |||| | ||||||||||||||||||    
T  14262061 taatattagcgaattccggttttagtccttgtaaaaaaaaatatttagattttgtccctgtaatttcagattcttccacttttggtcccttatt 14262154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 794 - 883
Target Start/End: Original strand, 30500068 - 30500159
Alignment:
Q  794 taatattagcaaattccgattttagtccttgtaaaataaaaatttagattt-gtcc-tgtaattccatattcctc-acttttggtcccttatt 883  Q
    |||||||||| |||| || ||||||||| ||||||| |||||||||||||| |||| ||||||| ||||||| || |||||||||||||||||    
T  30500068 taatattagcgaatttcggttttagtccctgtaaaa-aaaaatttagattttgtccctgtaatttcatattcttccacttttggtcccttatt 30500159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 758 - 843
Target Start/End: Complemental strand, 36991047 - 36990963
Alignment:
Q  758 attaattataggggttaatactgtttttggtctcgataatattagcaaattccgattttagtccttgtaaaataaaaatttagatt 843  Q
    ||||||||||||| ||||||||  |||||||| |  |||||||||| |||| || ||||||||| ||||||| |||| ||||||||    
T  36991047 attaattataggg-ttaatactacttttggtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagtttagatt 36990963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 758 - 843
Target Start/End: Complemental strand, 37016487 - 37016403
Alignment:
Q  758 attaattataggggttaatactgtttttggtctcgataatattagcaaattccgattttagtccttgtaaaataaaaatttagatt 843  Q
    ||||||||||||| ||||||||  |||||||| |  |||||||||| |||| || ||||||||| ||||||| |||| ||||||||    
T  37016487 attaattataggg-ttaatactacttttggtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagtttagatt 37016403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 794 - 883
Target Start/End: Complemental strand, 14162223 - 14162131
Alignment:
Q  794 taatattagcaaattccgattttagtccttgtaaaataaaaatttagattt-gtcct-gtaattccatattcctc-acttttggtcccttatt 883  Q
    |||||||||| ||||||| ||||||||| ||||||| | | |||||||||| ||||| |||||| || |||| || |||||||||||||||||    
T  14162223 taatattagcgaattccggttttagtccctgtaaaaaagagatttagattttgtccttgtaatttcagattcttccacttttggtcccttatt 14162131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 794 - 879
Target Start/End: Complemental strand, 30500393 - 30500305
Alignment:
Q  794 taatattagcaaattccgattttagtccttgtaaaataaaaatttaga-tttgt-cctgtaattccatattcct-cacttttggtccct 879  Q
    |||||||||| ||||||  ||||||||| ||||||| ||||||||||| ||||| ||||||||| ||||||  | ||||||||||||||    
T  30500393 taatattagcgaattccagttttagtccctgtaaaaaaaaaatttagattttgtccctgtaatttcatattgttccacttttggtccct 30500305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 794 - 883
Target Start/End: Original strand, 19112789 - 19112883
Alignment:
Q  794 taatattagcaaattccgattttagtccttgtaaaataaaaa--tttagattt-gtcc-tgtaattccatattcctc-acttttggtcccttatt 883  Q
    |||||||||| ||||||| ||||||||| ||||||| |||||  ||||||||| |||| || |||| ||||||| || |||||||||||||||||    
T  19112789 taatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctggaatttcatattcttccacttttggtcccttatt 19112883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 794 - 883
Target Start/End: Complemental strand, 5800957 - 5800865
Alignment:
Q  794 taatattagcaaattccgattttagtccttgtaaaataaaa-atttagattt-gtcct-gtaattccatattcctc-acttttggtcccttatt 883  Q
    |||||||||| ||||||| ||| ||||| ||||||| |||| |||||||||| ||||| |||||| ||||||| || |||||||||||||||||    
T  5800957 taatattagcgaattccggttt-agtccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattcttccacttttggtcccttatt 5800865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.00000000002; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 794 - 883
Target Start/End: Original strand, 7125943 - 7126035
Alignment:
Q  794 taatattagcaaattccgattttagtccttgtaaaataaaaatttaga-tttgt-cctgtaattccatattcct-cacttttggtcccttatt 883  Q
    |||||||||| ||||||||||||||||| ||||||| ||| ||||||| ||||| ||| ||||| || |||| | ||||||||||||||||||    
T  7125943 taatattagcgaattccgattttagtccctgtaaaaaaaagatttagattttgtccctataatttcagattcttccacttttggtcccttatt 7126035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 769 - 879
Target Start/End: Original strand, 22571077 - 22571191
Alignment:
Q  769 gggttaatactgtttttggtctcgataatattagcaaattccgattttagtccttgt-aaaataaaaatttagatt-tgtc-ctgtaattccatattcct 865  Q
    |||||||||||| |||| |||    |||||||||| ||||||||||||||||| ||| |||| ||||||||||||| | || |||||||| ||||||| |    
T  22571077 gggttaatactgatttttgtccttgtaatattagcgaattccgattttagtccctgtaaaaaaaaaaatttagattatatctctgtaatttcatattctt 22571176  T
Q  866 -cacttttggtccct 879  Q
     ||||||||||||||    
T  22571177 ccacttttggtccct 22571191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 794 - 844
Target Start/End: Complemental strand, 41001705 - 41001655
Alignment:
Q  794 taatattagcaaattccgattttagtccttgtaaaataaaaatttagattt 844  Q
    |||||||||| ||||||| ||||||||||||||||| ||| ||||||||||    
T  41001705 taatattagcgaattccggttttagtccttgtaaaaaaaagatttagattt 41001655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 794 - 883
Target Start/End: Complemental strand, 14144254 - 14144161
Alignment:
Q  794 taatattagcaaattccgattttagtccttgtaaaataaaa-atttaga-tttgt-cctgtaattccatattcct-cacttttggtcccttatt 883  Q
    |||||||| | ||||||||||||||||| ||||||| |||| ||||||| ||||| ||||||||| || |||| | ||||||||||||||||||    
T  14144254 taatattaacgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattcttccacttttggtcccttatt 14144161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 793 - 835
Target Start/End: Original strand, 18336491 - 18336533
Alignment:
Q  793 ataatattagcaaattccgattttagtccttgtaaaataaaaa 835  Q
    ||||||||||| ||||||||||||||||| ||||||| |||||    
T  18336491 ataatattagcgaattccgattttagtccctgtaaaaaaaaaa 18336533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 793 - 883
Target Start/End: Original strand, 31799664 - 31799758
Alignment:
Q  793 ataatattagcaaattccgattttagtccttgtaaaataaaa-atttaga-tttgt-cctgtaattccatattcct-cacttttggtcccttatt 883  Q
    ||||||||||| ||||||| ||| ||||| ||||||| |||| ||||||| ||||| ||||||||| || |||| | ||||||||||||||||||    
T  31799664 ataatattagcgaattccggtttcagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttccacttttggtcccttatt 31799758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000008; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 794 - 844
Target Start/End: Complemental strand, 3230215 - 3230164
Alignment:
Q  794 taatattagcaaattccgattttagtccttgtaaaataaaa-atttagattt 844  Q
    |||||||||| ||||||||||||||||| |||||||||||| ||||||||||    
T  3230215 taatattagcgaattccgattttagtccctgtaaaataaaagatttagattt 3230164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 793 - 879
Target Start/End: Original strand, 18500339 - 18500428
Alignment:
Q  793 ataatattagcaaattccgattttagtccttgtaaaataaaaatttaga-tttgt-cctgtaattccatattcct-cacttttggtccct 879  Q
    ||||||||||| |||| || ||||||||| ||||| | ||| ||||||| ||||| ||||||||| ||||||| | ||||||||||||||    
T  18500339 ataatattagcgaatttcggttttagtccctgtaagaaaaagatttagattttgtccctgtaatttcatattcttccacttttggtccct 18500428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000003; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 794 - 844
Target Start/End: Complemental strand, 10409726 - 10409676
Alignment:
Q  794 taatattagcaaattccgattttagtccttgtaaaataaaaatttagattt 844  Q
    |||||||||| ||||||||||||||||| ||||||| ||| ||||||||||    
T  10409726 taatattagcgaattccgattttagtccctgtaaaaaaaagatttagattt 10409676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 794 - 844
Target Start/End: Original strand, 12006566 - 12006616
Alignment:
Q  794 taatattagcaaattccgattttagtccttgtaaaataaaaatttagattt 844  Q
    |||||||||| ||||||||||||||||| ||||||| ||||| ||||||||    
T  12006566 taatattagcgaattccgattttagtccctgtaaaaaaaaaaattagattt 12006616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 793 - 879
Target Start/End: Original strand, 20419560 - 20419650
Alignment:
Q  793 ataatattagcaaattccgattttagtccttgtaaaataaaa-atttaga-tttgt-cctgtaattccatattcct-cacttttggtccct 879  Q
    ||||||||||| ||||||| ||||||||| ||||||| |||| ||||||| ||||| ||||||||| ||||||| | || |||||||||||    
T  20419560 ataatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccatttttggtccct 20419650  T

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Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 794 - 844
Target Start/End: Complemental strand, 20963846 - 20963796
Alignment:
Q  794 taatattagcaaattccgattttagtccttgtaaaataaaaatttagattt 844  Q
    |||||||||| ||||||| ||||||||| |||||||  |||||||||||||    
T  20963846 taatattagcgaattccggttttagtccctgtaaaaataaaatttagattt 20963796  T

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Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 794 - 879
Target Start/End: Complemental strand, 12006893 - 12006804
Alignment:
Q  794 taatattagcaaattccgattttagtccttgtaaa-ataaaaatttaga-tttgt-cctgtaattccatattcct-cacttttggtccct 879  Q
    |||||||||| ||||||||||||||||| |||||| | ||| ||||||| ||||| ||||||||| || |||| | ||||||||||||||    
T  12006893 taatattagcgaattccgattttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattcttccacttttggtccct 12006804  T

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Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 794 - 879
Target Start/End: Complemental strand, 38880074 - 38879988
Alignment:
Q  794 taatattagcaaattccgattttagtccttgtaaaataaaaatttaga-tttgt-cctgtaattccatattcct-cacttttggtccct 879  Q
    |||||||||||||||||| ||||||||  | ||||| ||||||||||| ||||| ||||||||| || |||| | ||||||||||||||    
T  38880074 taatattagcaaattccggttttagtc--tttaaaaaaaaaatttagattttgtccctgtaatttcagattcttccacttttggtccct 38879988  T

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Target: scaffold0361 (Bit Score: 33; Significance: 0.000000005; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 794 - 879
Target Start/End: Complemental strand, 4915 - 4827
Alignment:
Q  794 taatattagcaaattccgattttagtccttgtaaaataaaaatttaga-tttgtcc-tgtaattccatattcct-cacttttggtccct 879  Q
    |||||||||||||||||| ||||| ||| |||||||  || ||||||| ||||||| ||||||| ||||||| | ||||||||||||||    
T  4915 taatattagcaaattccggttttaatccctgtaaaaataagatttagattttgtccttgtaatttcatattcttccacttttggtccct 4827  T

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Target: scaffold0361; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 794 - 835
Target Start/End: Original strand, 4587 - 4628
Alignment:
Q  794 taatattagcaaattccgattttagtccttgtaaaataaaaa 835  Q
    |||||||||| ||||||||||||||||| ||||||| |||||    
T  4587 taatattagcgaattccgattttagtccctgtaaaaaaaaaa 4628  T

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Target: scaffold0220 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 769 - 844
Target Start/End: Original strand, 26479 - 26553
Alignment:
Q  769 gggttaatactgtttttggtctcgataatattagcaaattccgattttagtccttgtaaaataaaaatttagattt 844  Q
    |||||||||||||||||||||    ||||||||   ||||||||||||||||||| ||||| |||| |||||||||    
T  26479 gggttaatactgtttttggtccttgtaatattactgaattccgattttagtccttataaaa-aaaagtttagattt 26553  T

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Target: scaffold0352 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 795 - 879
Target Start/End: Complemental strand, 6031 - 5942
Alignment:
Q  795 aatattagcaaattccgattttagtccttgtaaaataaaaa--tttagatt-tgt-cctgtaattccatattcct-cacttttggtccct 879  Q
    ||||||||| ||||||||||||||||| ||||||| |||||  |||||||| ||| ||||||||| || |||||| |||||||| |||||    
T  6031 aatattagcgaattccgattttagtccctgtaaaaaaaaaaagtttagattctgtccctgtaatttcagattcctccacttttgatccct 5942  T

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