View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0753_high_29 (Length: 233)
Name: NF0753_high_29
Description: NF0753
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0753_high_29 |
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Alignment Details
Target: chr3 (Bit Score: 110; Significance: 1e-55; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 51840520 - 51840641
Alignment:
| Q |
1 |
caaggatcattctaagaagagaaactttcaccattacataggcgacaacccaaactaacctcaaatcaacctctctcccgcacacctactccctatctaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51840520 |
caaggatcattctaagaagagaaactttcaccattacataggcgacaacccaaactaacctcaaatcaacctctctcccgcacacctactccctatctaa |
51840619 |
T |
|
| Q |
101 |
ctccagaataatctacccacca |
122 |
Q |
| |
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||||||| |||||| |||||| |
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| T |
51840620 |
ctccagataaatctatccacca |
51840641 |
T |
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