View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0753_low_19 (Length: 313)
Name: NF0753_low_19
Description: NF0753
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0753_low_19 |
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Alignment Details
Target: chr4 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 26661787 - 26661676
Alignment:
| Q |
1 |
ttttgtaaaattgaattcaatcgcgcaaagatcttttttcttgaaacttcatcttagtttcacatcaatcggtatcatggagtcataaccaccatctttg |
100 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
26661787 |
ttttgaaaaattgaattcaatcgcgcaaagatcttttttcttgaaacttcatctta-------------cggtatcatggagtcataaccaccatctttg |
26661701 |
T |
|
| Q |
101 |
atagcaatttaaaaaattcaagaaa |
125 |
Q |
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||||||||||||||||||||||||| |
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| T |
26661700 |
atagcaatttaaaaaattcaagaaa |
26661676 |
T |
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