View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0753_low_20 (Length: 303)
Name: NF0753_low_20
Description: NF0753
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0753_low_20 |
 | |
|
| [»] scaffold0425 (2 HSPs) |
| | |
|
| [»] scaffold1643 (2 HSPs) |
| | |
|
| [»] scaffold0958 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 160; Significance: 3e-85; HSPs: 60)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 14 - 249
Target Start/End: Original strand, 6555913 - 6556148
Alignment:
| Q |
14 |
gaatggatatgtgtaaggtttcctctgcttaaagagctttatataagtgattgttccaaattgaaaagagtattgcctcaacatcttccatctttacaaa |
113 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6555913 |
gaatggatatgtgtaaggtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaagagtattgcctcaacatcttccatctttacaaa |
6556012 |
T |
|
| Q |
114 |
aactgaagattagtgattgcaacgagttggaggaattgttatgccttggagagtttcctttgcttaaagagttttctataagaaattgtcccgaattgaa |
213 |
Q |
| |
|
| || ||| | |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
6556013 |
atttgtggatcaatgattgcaacatgttggaggaatgtttatgccttggagagtttcctttgcttaaagagtttttaataagaaattgtcccgaattgaa |
6556112 |
T |
|
| Q |
214 |
aagggctctgcctcaacaccttccttctttacaaaa |
249 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||| |
|
|
| T |
6556113 |
aagggctcttcctcaacaccttccttctttacaaaa |
6556148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 14 - 275
Target Start/End: Original strand, 6521601 - 6521862
Alignment:
| Q |
14 |
gaatggatatgtgtaaggtttcctctgcttaaagagctttatataagtgattgttccaaattgaaaagagtattgcctcaacatcttccatctttacaaa |
113 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||| |||||||||| ||| | |||||||||| |
|
|
| T |
6521601 |
gaatggatatgtgtaaggtttcctctgcttaaagagctttatataaaaaattgtcctaaattgaaaagcaccctgcctcaacacctttcttctttacaaa |
6521700 |
T |
|
| Q |
114 |
aactgaagattagtgattgcaacgagttggaggaattgttatgccttggagagtttcctttgcttaaagagttttctataagaaattgtcccgaattgaa |
213 |
Q |
| |
|
|| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
6521701 |
aattgaagatcagtgattgcaacgagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttctatatccttttgtcccgaattgaa |
6521800 |
T |
|
| Q |
214 |
aagggctctgcctcaacaccttccttctttacaaaatctgcagattagtgattgcaacaagt |
275 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||| ||| ||||| | |||||||||||| |
|
|
| T |
6521801 |
aagggctctgcatcaacaccttccttctttacaaaaactggagattcggaattgcaacaagt |
6521862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 31 - 274
Target Start/End: Original strand, 6522833 - 6523076
Alignment:
| Q |
31 |
gtttcctctgcttaaagagctttatataagtgattgttccaaattgaaaagagtattgcctcaacatcttccatctttacaaaaactgaagattagtgat |
130 |
Q |
| |
|
||||||| ||||||||||| ||| |||||| ||||| || |||||||||| | |||||||||| ||||| ||||||||||||||| | | |||| |
|
|
| T |
6522833 |
gtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactggatgtatttgat |
6522932 |
T |
|
| Q |
131 |
tgcaacgagttggaggaattgttatgccttggagagtttcctttgcttaaagagttttctataagaaattgtcccgaattgaaaagggctctgcctcaac |
230 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6522933 |
tgcaacgagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcctcaac |
6523032 |
T |
|
| Q |
231 |
accttccttctttacaaaatctgcagattagtgattgcaacaag |
274 |
Q |
| |
|
||||||||||||||||||| ||| |||||||| ||||||||||| |
|
|
| T |
6523033 |
accttccttctttacaaaaactgaagattagtaattgcaacaag |
6523076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 31 - 274
Target Start/End: Original strand, 6840924 - 6841167
Alignment:
| Q |
31 |
gtttcctctgcttaaagagctttatataagtgattgttccaaattgaaaagagtattgcctcaacatcttccatctttacaaaaactgaagattagtgat |
130 |
Q |
| |
|
||||||| ||||||||||| ||| |||||| ||||| || |||||||||| | |||||||||| ||||| ||||||||||| || ||||| | ||| |
|
|
| T |
6840924 |
gtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaatctagagatttgggat |
6841023 |
T |
|
| Q |
131 |
tgcaacgagttggaggaattgttatgccttggagagtttcctttgcttaaagagttttctataagaaattgtcccgaattgaaaagggctctgcctcaac |
230 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6841024 |
tgcaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcctcaac |
6841123 |
T |
|
| Q |
231 |
accttccttctttacaaaatctgcagattagtgattgcaacaag |
274 |
Q |
| |
|
||||||||||||||||||| ||||||||| | |||||||||||| |
|
|
| T |
6841124 |
accttccttctttacaaaaactgcagatttgggattgcaacaag |
6841167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 31 - 275
Target Start/End: Original strand, 6522023 - 6522267
Alignment:
| Q |
31 |
gtttcctctgcttaaagagctttatataagtgattgttccaaattgaaaagagtattgcctcaacatcttccatctttacaaaaactgaagattagtgat |
130 |
Q |
| |
|
||||||| ||||||||||| ||| |||||| ||||| || |||||||||| | ||| |||||| ||||| ||||||||||||||| ||||| | || |
|
|
| T |
6522023 |
gtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcatcaacaccttccttctttacaaaaactggagattcggaat |
6522122 |
T |
|
| Q |
131 |
tgcaacgagttggaggaattgttatgccttggagagtttcctttgcttaaagagttttctataagaaattgtcccgaattgaaaagggctctgcctcaac |
230 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
6522123 |
tgcaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcatcaac |
6522222 |
T |
|
| Q |
231 |
accttccttctttacaaaatctgcagattagtgattgcaacaagt |
275 |
Q |
| |
|
||||||||||||||||||||||| ||||| | |||||||||||| |
|
|
| T |
6522223 |
accttccttctttacaaaatctggagattcggaattgcaacaagt |
6522267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 31 - 275
Target Start/End: Original strand, 6840789 - 6841033
Alignment:
| Q |
31 |
gtttcctctgcttaaagagctttatataagtgattgttccaaattgaaaagagtattgcctcaacatcttccatctttacaaaaactgaagattagtgat |
130 |
Q |
| |
|
||||||| ||||||||||| ||| |||| |||||| || |||||||||| | |||||||||| ||||| ||||||||||| || ||||| | ||| |
|
|
| T |
6840789 |
gtttcctttgcttaaagagatttctatatccgattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaatctagagatttgggat |
6840888 |
T |
|
| Q |
131 |
tgcaacgagttggaggaattgttatgccttggagagtttcctttgcttaaagagttttctataagaaattgtcccgaattgaaaagggctctgcctcaac |
230 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6840889 |
tgcaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcctcaac |
6840988 |
T |
|
| Q |
231 |
accttccttctttacaaaatctgcagattagtgattgcaacaagt |
275 |
Q |
| |
|
|||||||||||||||||||||| ||||| | ||||||||||||| |
|
|
| T |
6840989 |
accttccttctttacaaaatctagagatttgggattgcaacaagt |
6841033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 15 - 274
Target Start/End: Original strand, 6528348 - 6528607
Alignment:
| Q |
15 |
aatggatatgtgtaaggtttcctctgcttaaagagctttatataagtgattgttccaaattgaaaagagtattgcctcaacatcttccatctttacaaaa |
114 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||||||||| |||||| ||||| | ||||||||||| ||||||||||| ||||| ||||||||||| |
|
|
| T |
6528348 |
aatggatatgtctaaggtttcctttgcttaaagagctttctataagaaattgtcctaaattgaaaagcaccttgcctcaacagcttccttctttacaaaa |
6528447 |
T |
|
| Q |
115 |
actgaagattagtgattgcaacgagttggaggaattgttatgccttggagagtttcctttgcttaaagagttttctataagaaattgtcccgaattgaaa |
214 |
Q |
| |
|
| || || | | |||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||| |
|
|
| T |
6528448 |
attgtgcataaataattgcaacaagttggaggaatggttatgccttggagagtttcctttgcttaaagagatttctataacaagttgtcccgaattgaaa |
6528547 |
T |
|
| Q |
215 |
agggctctgcctcaacaccttccttctttacaaaatctgcagattagtgattgcaacaag |
274 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||| |||||| |||||||| |||| |
|
|
| T |
6528548 |
agggctctgcctcaacaccttccttctttacaaaaactggagattattgattgcagcaag |
6528607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 31 - 275
Target Start/End: Original strand, 6521888 - 6522132
Alignment:
| Q |
31 |
gtttcctctgcttaaagagctttatataagtgattgttccaaattgaaaagagtattgcctcaacatcttccatctttacaaaaactgaagattagtgat |
130 |
Q |
| |
|
||||||| ||||||||||| ||| |||||| ||||| || |||||||||| | |||||||||| ||||| ||||||||||||||| | | |||| |
|
|
| T |
6521888 |
gtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactggatgtatttgat |
6521987 |
T |
|
| Q |
131 |
tgcaacgagttggaggaattgttatgccttggagagtttcctttgcttaaagagttttctataagaaattgtcccgaattgaaaagggctctgcctcaac |
230 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
6521988 |
tgcaacgagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcatcaac |
6522087 |
T |
|
| Q |
231 |
accttccttctttacaaaatctgcagattagtgattgcaacaagt |
275 |
Q |
| |
|
||||||||||||||||||| ||| ||||| | |||||||||||| |
|
|
| T |
6522088 |
accttccttctttacaaaaactggagattcggaattgcaacaagt |
6522132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 33 - 275
Target Start/End: Original strand, 6840653 - 6840898
Alignment:
| Q |
33 |
ttcctctgcttaaagagctttatataagtgattgttccaaattgaaaagagtattg---cctcaacatcttccatctttacaaaaactgaagattagtga |
129 |
Q |
| |
|
||||| ||||||||||| ||| |||||| |||| ||||||| ||||| | ||| |||||||| ||||| ||||||||||||||||||||| |||| |
|
|
| T |
6840653 |
ttcctttgcttaaagagatttctataagaaattgccccaaattaaaaagggccttgctacctcaacaccttccttctttacaaaaactgaagatttgtga |
6840752 |
T |
|
| Q |
130 |
ttgcaacgagttggaggaattgttatgccttggagagtttcctttgcttaaagagttttctataagaaattgtcccgaattgaaaagggctctgcctcaa |
229 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
6840753 |
ttgcaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttctatatccgattgtcccgaattgaaaagggctctgcctcaa |
6840852 |
T |
|
| Q |
230 |
caccttccttctttacaaaatctgcagattagtgattgcaacaagt |
275 |
Q |
| |
|
||||||||||||||||||||||| ||||| | ||||||||||||| |
|
|
| T |
6840853 |
caccttccttctttacaaaatctagagatttgggattgcaacaagt |
6840898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 31 - 249
Target Start/End: Original strand, 6522158 - 6522376
Alignment:
| Q |
31 |
gtttcctctgcttaaagagctttatataagtgattgttccaaattgaaaagagtattgcctcaacatcttccatctttacaaaaactgaagattagtgat |
130 |
Q |
| |
|
||||||| ||||||||||| ||| |||||| ||||| || |||||||||| | ||| |||||| ||||| ||||||||||| ||| ||||| | || |
|
|
| T |
6522158 |
gtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcatcaacaccttccttctttacaaaatctggagattcggaat |
6522257 |
T |
|
| Q |
131 |
tgcaacgagttggaggaattgttatgccttggagagtttcctttgcttaaagagttttctataagaaattgtcccgaattgaaaagggctctgcctcaac |
230 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6522258 |
tgcaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcctcaac |
6522357 |
T |
|
| Q |
231 |
accttccttctttacaaaa |
249 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
6522358 |
accttccttctttacaaaa |
6522376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 91 - 249
Target Start/End: Original strand, 6521813 - 6521971
Alignment:
| Q |
91 |
tcaacatcttccatctttacaaaaactgaagattagtgattgcaacgagttggaggaattgttatgccttggagagtttcctttgcttaaagagttttct |
190 |
Q |
| |
|
|||||| ||||| ||||||||||||||| ||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
6521813 |
tcaacaccttccttctttacaaaaactggagattcggaattgcaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttct |
6521912 |
T |
|
| Q |
191 |
ataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaa |
249 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6521913 |
ataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaa |
6521971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 91 - 249
Target Start/End: Original strand, 6522758 - 6522916
Alignment:
| Q |
91 |
tcaacatcttccatctttacaaaaactgaagattagtgattgcaacgagttggaggaattgttatgccttggagagtttcctttgcttaaagagttttct |
190 |
Q |
| |
|
|||||| ||||| ||||||||||||||| ||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
6522758 |
tcaacaccttccttctttacaaaaactggagattcggaattgcaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttct |
6522857 |
T |
|
| Q |
191 |
ataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaa |
249 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6522858 |
ataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaa |
6522916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 91 - 249
Target Start/End: Original strand, 6522488 - 6522646
Alignment:
| Q |
91 |
tcaacatcttccatctttacaaaaactgaagattagtgattgcaacgagttggaggaattgttatgccttggagagtttcctttgcttaaagagttttct |
190 |
Q |
| |
|
|||||| ||||| ||||||||||||||| ||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
6522488 |
tcaacaccttccttctttacaaaaactggagattcggaattgcaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttct |
6522587 |
T |
|
| Q |
191 |
ataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaa |
249 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6522588 |
ataacaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaa |
6522646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 31 - 249
Target Start/End: Original strand, 6556065 - 6556283
Alignment:
| Q |
31 |
gtttcctctgcttaaagagctttatataagtgattgttccaaattgaaaagagtattgcctcaacatcttccatctttacaaaaactgaagattagtgat |
130 |
Q |
| |
|
||||||| ||||||||||| ||| ||||| ||||| || |||||||||| | | |||||||| ||||| ||||||||||||||| | |||| |
|
|
| T |
6556065 |
gtttcctttgcttaaagagtttttaataagaaattgtcccgaattgaaaagggctcttcctcaacaccttccttctttacaaaaactgggtgtatttgat |
6556164 |
T |
|
| Q |
131 |
tgcaacgagttggaggaattgttatgccttggagagtttcctttgcttaaagagttttctataagaaattgtcccgaattgaaaagggctctgcctcaac |
230 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
6556165 |
tgcaacgagttggaggaattgttatgccttggagagtttcctttgcttaaagtgttttctataagaaattgtctcgaattgaaaagggctctgcctcaac |
6556264 |
T |
|
| Q |
231 |
accttccttctttacaaaa |
249 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
6556265 |
accttccttctttacaaaa |
6556283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 41 - 275
Target Start/End: Complemental strand, 6734355 - 6734112
Alignment:
| Q |
41 |
cttaaagagctttatataagtgattgttccaaattgaaaagagtattgcctcaac---------atcttccatctttacaaaaactgaagattagtgatt |
131 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||| || ||| | ||||| |
|
|
| T |
6734355 |
cttaaagagctttatataagtcattgttccaaattcaaaagagtattgcctcaacttcttccacatcttccatctttacaaaaattgcggatcaatgatt |
6734256 |
T |
|
| Q |
132 |
gcaacgagttggaggaattgttatgccttggagagtttcctttgcttaaagagttttctataagaaattgtcccgaattgaaaagggctctgcctcaaca |
231 |
Q |
| |
|
||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||| || ||| | |||||||||||||||||||| ||||| |
|
|
| T |
6734255 |
gcaacatgttggaggaatggttatgccttggagagtttcctttgcttaaagatatttctatattcaaatgttctgaattgaaaagggctctgccacaaca |
6734156 |
T |
|
| Q |
232 |
ccttccttctttacaaaatctgcagattagtgattgcaacaagt |
275 |
Q |
| |
|
||||||||||||||| || ||| ||||||| ||||||||||||| |
|
|
| T |
6734155 |
ccttccttctttacagaaactggagattagagattgcaacaagt |
6734112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 41 - 275
Target Start/End: Original strand, 6781308 - 6781551
Alignment:
| Q |
41 |
cttaaagagctttatataagtgattgttccaaattgaaaagagtattgcctcaac---------atcttccatctttacaaaaactgaagattagtgatt |
131 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||| || ||| | ||||| |
|
|
| T |
6781308 |
cttaaagagctttatataagtcattgttccaaattcaaaagagtattgcctcaacttcttccacatcttccatctttacaaaaattgcggatcaatgatt |
6781407 |
T |
|
| Q |
132 |
gcaacgagttggaggaattgttatgccttggagagtttcctttgcttaaagagttttctataagaaattgtcccgaattgaaaagggctctgcctcaaca |
231 |
Q |
| |
|
||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||| || ||| | |||||||||||||||||||| ||||| |
|
|
| T |
6781408 |
gcaacatgttggaggaatggttatgccttggagagtttcctttgcttaaagatatttctatattcaaatgttctgaattgaaaagggctctgccacaaca |
6781507 |
T |
|
| Q |
232 |
ccttccttctttacaaaatctgcagattagtgattgcaacaagt |
275 |
Q |
| |
|
||||||||||||||| || ||| ||||||| ||||||||||||| |
|
|
| T |
6781508 |
ccttccttctttacagaaactggagattagagattgcaacaagt |
6781551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 31 - 275
Target Start/End: Original strand, 6522293 - 6522537
Alignment:
| Q |
31 |
gtttcctctgcttaaagagctttatataagtgattgttccaaattgaaaagagtattgcctcaacatcttccatctttacaaaaactgaagattagtgat |
130 |
Q |
| |
|
||||||| ||||||||||| ||| |||||| ||||| || |||||||||| | |||||||||| ||||| ||||||||||||||| | | |||| |
|
|
| T |
6522293 |
gtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactggatgtatttgat |
6522392 |
T |
|
| Q |
131 |
tgcaacgagttggaggaattgttatgccttggagagtttcctttgcttaaagagttttctataagaaattgtcccgaattgaaaagggctctgcctcaac |
230 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
6522393 |
tgcaacgagttgcaggaattgttatgccttggagagtttcctttgcttaaagagatttctatatccttttgtcccgaattgaaaagggctctgcatcaac |
6522492 |
T |
|
| Q |
231 |
accttccttctttacaaaatctgcagattagtgattgcaacaagt |
275 |
Q |
| |
|
||||||||||||||||||| ||| ||||| | |||||||||||| |
|
|
| T |
6522493 |
accttccttctttacaaaaactggagattcggaattgcaacaagt |
6522537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 31 - 275
Target Start/End: Original strand, 6522563 - 6522807
Alignment:
| Q |
31 |
gtttcctctgcttaaagagctttatataagtgattgttccaaattgaaaagagtattgcctcaacatcttccatctttacaaaaactgaagattagtgat |
130 |
Q |
| |
|
||||||| ||||||||||| ||| ||||| ||||| || |||||||||| | |||||||||| ||||| ||||||||||||||| | | |||| |
|
|
| T |
6522563 |
gtttcctttgcttaaagagatttctataacaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactggatgtatttgat |
6522662 |
T |
|
| Q |
131 |
tgcaacgagttggaggaattgttatgccttggagagtttcctttgcttaaagagttttctataagaaattgtcccgaattgaaaagggctctgcctcaac |
230 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
6522663 |
tgcaacgagttgcaggaattgttatgccttggagagtttcctttgcttaaagagatttctatatccttttgtcccgaattgaaaagggctctgcatcaac |
6522762 |
T |
|
| Q |
231 |
accttccttctttacaaaatctgcagattagtgattgcaacaagt |
275 |
Q |
| |
|
||||||||||||||||||| ||| ||||| | |||||||||||| |
|
|
| T |
6522763 |
accttccttctttacaaaaactggagattcggaattgcaacaagt |
6522807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 30 - 255
Target Start/End: Original strand, 6840377 - 6840605
Alignment:
| Q |
30 |
ggtttcctctgcttaaagagctttatataagtgattgttccaaattgaaaag---agtattgcctcaacatcttccatctttacaaaaactgaagattag |
126 |
Q |
| |
|
|||||||| |||||||| || ||| |||||| | ||| |||||||||||| ||| ||||| |||| ||| | ||||||||||| ||| ||||||| |
|
|
| T |
6840377 |
ggtttcctttgcttaaaaagatttctataagaaaatgtcccaaattgaaaaaggcagtgctgcctaaacaccttacttctttacaaaagctggagattag |
6840476 |
T |
|
| Q |
127 |
tgattgcaacgagttggaggaattgttatgccttggagagtttcctttgcttaaagagttttctataagaaattgtcccgaattgaaaagggctctgcct |
226 |
Q |
| |
|
| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||| ||||||||||||||||||| |
|
|
| T |
6840477 |
ttattgcaacaagttggaggaattgttatgccttggagagtttcctttgcttaaagagatttatatattcgattgtcccaaattgaaaagggctctgcca |
6840576 |
T |
|
| Q |
227 |
caacaccttccttctttacaaaatctgca |
255 |
Q |
| |
|
||||||||||||||||||||||| ||||| |
|
|
| T |
6840577 |
caacaccttccttctttacaaaaactgca |
6840605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 31 - 275
Target Start/End: Original strand, 6840516 - 6840763
Alignment:
| Q |
31 |
gtttcctctgcttaaagagctttatataagtgattgttccaaattgaaaagagtattgcctcaacatcttccatctttacaaaaactgaagattagtgat |
130 |
Q |
| |
|
||||||| ||||||||||| |||||||| |||||| ||||||||||||| | |||| ||||| ||||| ||||||||||||||| | | |||| |
|
|
| T |
6840516 |
gtttcctttgcttaaagagatttatatattcgattgtcccaaattgaaaagggctctgccacaacaccttccttctttacaaaaactgcatgtatttgat |
6840615 |
T |
|
| Q |
131 |
tgcaacgagttggaggaattgttatgccttggagagtttcctttgcttaaagagttttctataagaaattgtcccgaattgaaaagggc---tctgcctc |
227 |
Q |
| |
|
||||||||||||||| ||| ||| || |||| || | ||||||||||||||||| |||||||||||||||| ||| |||| |||||||| || |||| |
|
|
| T |
6840616 |
tgcaacgagttggagaaatggttttgtcttgaagggattcctttgcttaaagagatttctataagaaattgccccaaattaaaaagggccttgctacctc |
6840715 |
T |
|
| Q |
228 |
aacaccttccttctttacaaaatctgcagattagtgattgcaacaagt |
275 |
Q |
| |
|
|||||||||||||||||||||| ||| ||||| ||||||||||||||| |
|
|
| T |
6840716 |
aacaccttccttctttacaaaaactgaagatttgtgattgcaacaagt |
6840763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 14 - 216
Target Start/End: Complemental strand, 6734517 - 6734315
Alignment:
| Q |
14 |
gaatggatatgtgtaaggtttcctctgcttaaagagctttatataagtgattgttccaaattgaaaagagtattgcctcaacatcttccatctttacaaa |
113 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |||||||| ||||| ||||| | ||| ||||| | |||||||||||||||| |||||||||| |
|
|
| T |
6734517 |
gaatggatatgtgtaaggtttcctttgcttatagagctttctataacaaattgtcctaaactgaaaggcaccctgcctcaacatcttccttctttacaaa |
6734418 |
T |
|
| Q |
114 |
aactgaagattagtgattgcaacgagttggaggaattgttatgccttggagagtttcctttgcttaaagagttttctataagaaattgtcccgaattgaa |
213 |
Q |
| |
|
|| |||| ||||||| |||||| ||||||||||||| |||||| |||| || ||||| || ||||||||| ||| |||||| ||||| || |||| || |
|
|
| T |
6734417 |
aattgaatattagtggttgcaaagagttggaggaatggttatgtcttgaagggtttctttctcttaaagagctttatataagtcattgttccaaattcaa |
6734318 |
T |
|
| Q |
214 |
aag |
216 |
Q |
| |
|
||| |
|
|
| T |
6734317 |
aag |
6734315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 14 - 216
Target Start/End: Original strand, 6781146 - 6781348
Alignment:
| Q |
14 |
gaatggatatgtgtaaggtttcctctgcttaaagagctttatataagtgattgttccaaattgaaaagagtattgcctcaacatcttccatctttacaaa |
113 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |||||||| ||||| ||||| | ||| ||||| | |||||||||||||||| |||||||||| |
|
|
| T |
6781146 |
gaatggatatgtgtaaggtttcctttgcttatagagctttctataacaaattgtcctaaactgaaaggcaccctgcctcaacatcttccttctttacaaa |
6781245 |
T |
|
| Q |
114 |
aactgaagattagtgattgcaacgagttggaggaattgttatgccttggagagtttcctttgcttaaagagttttctataagaaattgtcccgaattgaa |
213 |
Q |
| |
|
|| |||| ||||||| |||||| ||||||||||||| |||||| |||| || ||||| || ||||||||| ||| |||||| ||||| || |||| || |
|
|
| T |
6781246 |
aattgaatattagtggttgcaaagagttggaggaatggttatgtcttgaagggtttctttctcttaaagagctttatataagtcattgttccaaattcaa |
6781345 |
T |
|
| Q |
214 |
aag |
216 |
Q |
| |
|
||| |
|
|
| T |
6781346 |
aag |
6781348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 166 - 275
Target Start/End: Complemental strand, 7586418 - 7586309
Alignment:
| Q |
166 |
gtttcctttgcttaaagagttttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaatctgcagattagtgat |
265 |
Q |
| |
|
||||||||||||||||||| ||||||||| ||| |||||| | |||||||||||||||||||||||||||||||||||||| || ||| |||||| ||| |
|
|
| T |
7586418 |
gtttcctttgcttaaagagctttctataaaaaaatgtcccaagttgaaaagggctctgcctcaacaccttccttctttacagaaactggagattaaagat |
7586319 |
T |
|
| Q |
266 |
tgcaacaagt |
275 |
Q |
| |
|
||||| |||| |
|
|
| T |
7586318 |
tgcaagaagt |
7586309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 166 - 275
Target Start/End: Original strand, 8570437 - 8570546
Alignment:
| Q |
166 |
gtttcctttgcttaaagagttttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaatctgcagattagtgat |
265 |
Q |
| |
|
|||||||||||||||| || ||||||||||| |||||| | |||||||||||| ||||||| ||||||||||||||||||||| ||| |||| |||||| |
|
|
| T |
8570437 |
gtttcctttgcttaaaaagctttctataagatattgtcacagattgaaaagggccctgcctcgacaccttccttctttacaaaaactggagatcagtgat |
8570536 |
T |
|
| Q |
266 |
tgcaacaagt |
275 |
Q |
| |
|
||||| |||| |
|
|
| T |
8570537 |
tgcaagaagt |
8570546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 142 - 249
Target Start/End: Original strand, 6796073 - 6796180
Alignment:
| Q |
142 |
ggaggaattgttatgccttggagagtttcctttgcttaaagagttttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttct |
241 |
Q |
| |
|
|||||||| ||| || |||| || ||||||||||||||||||| ||| ||||| || ||||| ||||||||||||||||| ||||||| ||||||||||| |
|
|
| T |
6796073 |
ggaggaatggttttgtcttgaagggtttcctttgcttaaagagctttatataacaagttgtcacgaattgaaaagggctcagcctcaaaaccttccttct |
6796172 |
T |
|
| Q |
242 |
ttacaaaa |
249 |
Q |
| |
|
|||||||| |
|
|
| T |
6796173 |
ttacaaaa |
6796180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 6945818 - 6945732
Alignment:
| Q |
166 |
gtttcctttgcttaaagagttttctataagaaattgtcccgaattgaaaagggc---tctgcctcaacaccttccttctttacaaaa |
249 |
Q |
| |
|
||||||||||||||||||| || ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
6945818 |
gtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggccttgctgcctcaacaccttccttctttacaaaa |
6945732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 140 - 275
Target Start/End: Complemental strand, 6932168 - 6932033
Alignment:
| Q |
140 |
ttggaggaattgttatgccttggagagtttcctttgcttaaagagttttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttcctt |
239 |
Q |
| |
|
|||||||||| |||||| |||| | |||||||||||||| |||| ||| |||| || | |||||||||||||||||| |||||||||||||||| |
|
|
| T |
6932168 |
ttggaggaatggttatgtcttgatgggtttcctttgcttagagagctttactcaagaggatggctcgaattgaaaagggctcttcctcaacaccttcctt |
6932069 |
T |
|
| Q |
240 |
ctttacaaaatctgcagattagtgattgcaacaagt |
275 |
Q |
| |
|
|||||||||| ||| |||||||||||||| |||||| |
|
|
| T |
6932068 |
ctttacaaaaactggagattagtgattgccacaagt |
6932033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 142 - 249
Target Start/End: Complemental strand, 8453206 - 8453099
Alignment:
| Q |
142 |
ggaggaattgttatgccttggagagtttcctttgcttaaagagttttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttct |
241 |
Q |
| |
|
|||||||| ||| || |||| || ||||||||||||||||||| ||| ||||||| | |||||| ||||||||| | | ||||||||||||||||||||| |
|
|
| T |
8453206 |
ggaggaatggttgtgtcttgaagggtttcctttgcttaaagagctttatataagagaatgtcccaaattgaaaatgtccctgcctcaacaccttccttct |
8453107 |
T |
|
| Q |
242 |
ttacaaaa |
249 |
Q |
| |
|
|||||||| |
|
|
| T |
8453106 |
ttacaaaa |
8453099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 142 - 249
Target Start/End: Complemental strand, 8470131 - 8470024
Alignment:
| Q |
142 |
ggaggaattgttatgccttggagagtttcctttgcttaaagagttttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttct |
241 |
Q |
| |
|
|||||||| ||| || |||| || ||||||||||||||||||| ||||||||| || ||||||||||||| ||| || |||||||||||||||||||| |
|
|
| T |
8470131 |
ggaggaatggttgtgtcttgaagggtttcctttgcttaaagagctttctataaaaagctgtcccgaattgagaagcgcattgcctcaacaccttccttct |
8470032 |
T |
|
| Q |
242 |
ttacaaaa |
249 |
Q |
| |
|
|||||||| |
|
|
| T |
8470031 |
ttacaaaa |
8470024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 166 - 275
Target Start/End: Original strand, 6840378 - 6840490
Alignment:
| Q |
166 |
gtttcctttgcttaaagagttttctataagaaattgtcccgaattgaaaagggct---ctgcctcaacaccttccttctttacaaaatctgcagattagt |
262 |
Q |
| |
|
|||||||||||||||| || ||||||||||||| |||||| ||||||||| ||| |||||| |||||||| ||||||||||||| ||| |||||||| |
|
|
| T |
6840378 |
gtttcctttgcttaaaaagatttctataagaaaatgtcccaaattgaaaaaggcagtgctgcctaaacaccttacttctttacaaaagctggagattagt |
6840477 |
T |
|
| Q |
263 |
gattgcaacaagt |
275 |
Q |
| |
|
|||||||||||| |
|
|
| T |
6840478 |
tattgcaacaagt |
6840490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 6522968 - 6523083
Alignment:
| Q |
31 |
gtttcctctgcttaaagagctttatataagtgattgttccaaattgaaaagagtattgcctcaacatcttccatctttacaaaaactgaagattagtgat |
130 |
Q |
| |
|
||||||| ||||||||||| ||| |||||| ||||| || |||||||||| | |||||||||| ||||| |||||||||||||||||||||||| || |
|
|
| T |
6522968 |
gtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactgaagattagtaat |
6523067 |
T |
|
| Q |
131 |
tgcaacgagttggagg |
146 |
Q |
| |
|
|||||| || |||||| |
|
|
| T |
6523068 |
tgcaacaagatggagg |
6523083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 142 - 249
Target Start/End: Complemental strand, 8588383 - 8588276
Alignment:
| Q |
142 |
ggaggaattgttatgccttggagagtttcctttgcttaaagagttttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttct |
241 |
Q |
| |
|
|||||||| | |||||||| || |||||||||||||||| || | | |||||| | ||||| ||||||||||||||| |||||||||||||||||||| |
|
|
| T |
8588383 |
ggaggaatggatatgccttcaagggtttcctttgcttaaaaagctatttataagtgaatgtcctgaattgaaaagggctttgcctcaacaccttccttct |
8588284 |
T |
|
| Q |
242 |
ttacaaaa |
249 |
Q |
| |
|
|||||||| |
|
|
| T |
8588283 |
ttacaaaa |
8588276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 142 - 249
Target Start/End: Original strand, 6450256 - 6450363
Alignment:
| Q |
142 |
ggaggaattgttatgccttggagagtttcctttgcttaaagagttttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttct |
241 |
Q |
| |
|
|||||||| ||||| ||| |||||||||| | ||||||||| || ||||||||||||||| || |||||||||| ||||||||||||||||||||| |
|
|
| T |
6450256 |
ggaggaatggttatttattgaagagtttcctctacttaaagagcttgaaataagaaattgtcccaaactgaaaagggccctgcctcaacaccttccttct |
6450355 |
T |
|
| Q |
242 |
ttacaaaa |
249 |
Q |
| |
|
||| |||| |
|
|
| T |
6450356 |
ttagaaaa |
6450363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 275
Target Start/End: Original strand, 6481442 - 6481577
Alignment:
| Q |
140 |
ttggaggaattgttatgccttggagagtttcctttgcttaaagagttttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttcctt |
239 |
Q |
| |
|
|||||||||| |||||| | || || ||||| | |||||||||| || |||||| | |||||||| ||||||||||||| || |||||||||||||||| |
|
|
| T |
6481442 |
ttggaggaatggttatgtcatgaagggtttctgtcgcttaaagagcttactataaaagattgtcccaaattgaaaagggcccttcctcaacaccttcctt |
6481541 |
T |
|
| Q |
240 |
ctttacaaaatctgcagattagtgattgcaacaagt |
275 |
Q |
| |
|
||||||| || || ||||| | |||||||||||| |
|
|
| T |
6481542 |
ctttacagaaattgtcgattattaattgcaacaagt |
6481577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 142 - 249
Target Start/End: Original strand, 6730184 - 6730291
Alignment:
| Q |
142 |
ggaggaattgttatgccttggagagtttcctttgcttaaagagttttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttct |
241 |
Q |
| |
|
|||||||| ||||| ||| |||||||||| | ||||||||| || ||||||||||||||| || |||||||||| ||||||||||||||||||||| |
|
|
| T |
6730184 |
ggaggaatggttatttattgaagagtttcctctacttaaagagcttgaaataagaaattgtcccaaactgaaaagggccctgcctcaacaccttccttct |
6730283 |
T |
|
| Q |
242 |
ttacaaaa |
249 |
Q |
| |
|
||| |||| |
|
|
| T |
6730284 |
ttagaaaa |
6730291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 144 - 268
Target Start/End: Original strand, 6592810 - 6592934
Alignment:
| Q |
144 |
aggaattgttatgccttggagagtttcctttgcttaaagagttttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttcttt |
243 |
Q |
| |
|
|||||| |||||| |||| || || ||||||||| ||||| ||| ||||| | |||||||| | |||||||| || ||||||||||||||||||||||| |
|
|
| T |
6592810 |
aggaatggttatgtcttgaaggtttccctttgcttcaagagctttgtataaaacattgtcccaagttgaaaagagccctgcctcaacaccttccttcttt |
6592909 |
T |
|
| Q |
244 |
acaaaatctgcagattagtgattgc |
268 |
Q |
| |
|
||||| || |||||| ||||||| |
|
|
| T |
6592910 |
gcaaaaattggagattactgattgc |
6592934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 6841059 - 6841174
Alignment:
| Q |
31 |
gtttcctctgcttaaagagctttatataagtgattgttccaaattgaaaagagtattgcctcaacatcttccatctttacaaaaactgaagattagtgat |
130 |
Q |
| |
|
||||||| ||||||||||| ||| |||||| ||||| || |||||||||| | |||||||||| ||||| ||||||||||||||| ||||| | ||| |
|
|
| T |
6841059 |
gtttcctttgcttaaagagatttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaaactgcagatttgggat |
6841158 |
T |
|
| Q |
131 |
tgcaacgagttggagg |
146 |
Q |
| |
|
|||||| || |||||| |
|
|
| T |
6841159 |
tgcaacaagatggagg |
6841174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 270
Target Start/End: Complemental strand, 6734500 - 6734396
Alignment:
| Q |
166 |
gtttcctttgcttaaagagttttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaatctgcagattagtgat |
265 |
Q |
| |
|
|||||||||||||| |||| ||||||||| ||||||||| || ||||| | | ||||||||||| ||||||||||||||||| || | ||||||| | |
|
|
| T |
6734500 |
gtttcctttgcttatagagctttctataacaaattgtcctaaactgaaaggcaccctgcctcaacatcttccttctttacaaaaattgaatattagtggt |
6734401 |
T |
|
| Q |
266 |
tgcaa |
270 |
Q |
| |
|
||||| |
|
|
| T |
6734400 |
tgcaa |
6734396 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 270
Target Start/End: Original strand, 6781163 - 6781267
Alignment:
| Q |
166 |
gtttcctttgcttaaagagttttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaatctgcagattagtgat |
265 |
Q |
| |
|
|||||||||||||| |||| ||||||||| ||||||||| || ||||| | | ||||||||||| ||||||||||||||||| || | ||||||| | |
|
|
| T |
6781163 |
gtttcctttgcttatagagctttctataacaaattgtcctaaactgaaaggcaccctgcctcaacatcttccttctttacaaaaattgaatattagtggt |
6781262 |
T |
|
| Q |
266 |
tgcaa |
270 |
Q |
| |
|
||||| |
|
|
| T |
6781263 |
tgcaa |
6781267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 190
Target Start/End: Original strand, 6796096 - 6796256
Alignment:
| Q |
30 |
ggtttcctctgcttaaagagctttatataagtgattgttccaaattgaaaagagtattgcctcaacatcttccatctttacaaaaactgaagattagtga |
129 |
Q |
| |
|
|||||||| ||||||||||||||||||||| |||| | |||||||||| | ||||||| | ||||| |||||||||||| || ||| | | | |
|
|
| T |
6796096 |
ggtttcctttgcttaaagagctttatataacaagttgtcacgaattgaaaagggctcagcctcaaaaccttccttctttacaaaaattgtggatcaataa |
6796195 |
T |
|
| Q |
130 |
ttgcaacgagttggaggaattgttatgccttggagagtttcctttgcttaaagagttttct |
190 |
Q |
| |
|
||||| ||| ||||||| |||||||| ||||||||||||||||||||||||| ||||| |
|
|
| T |
6796196 |
ttgcatgatgtttgaggaatggttatgccctggagagtttcctttgcttaaagagatttct |
6796256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 146
Target Start/End: Original strand, 8570436 - 8570552
Alignment:
| Q |
30 |
ggtttcctctgcttaaagagctttatataagtgattgttccaaattgaaaagagtattgcctcaacatcttccatctttacaaaaactgaagattagtga |
129 |
Q |
| |
|
|||||||| |||||||| |||||| |||||| ||||| || ||||||||| | |||||| ||| ||||| ||||||||||||||| |||| ||||| |
|
|
| T |
8570436 |
ggtttcctttgcttaaaaagctttctataagatattgtcacagattgaaaagggccctgcctcgacaccttccttctttacaaaaactggagatcagtga |
8570535 |
T |
|
| Q |
130 |
ttgcaacgagttggagg |
146 |
Q |
| |
|
|||||| ||||||||| |
|
|
| T |
8570536 |
ttgcaagaagttggagg |
8570552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 146
Target Start/End: Complemental strand, 5297239 - 5297180
Alignment:
| Q |
87 |
tgcctcaacatcttccatctttacaaaaactgaagattagtgattgcaacgagttggagg |
146 |
Q |
| |
|
|||||||||||||||| ||||| |||||| ||||||||||||||||| | |||||||||| |
|
|
| T |
5297239 |
tgcctcaacatcttccttctttgcaaaaattgaagattagtgattgccaagagttggagg |
5297180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 268
Target Start/End: Complemental strand, 6915647 - 6915549
Alignment:
| Q |
170 |
cctttgcttaaagagttttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaatctgcagattagtgattgc |
268 |
Q |
| |
|
||||||||| ||||| ||| ||||| | |||||||| | |||||||| | ||||||||||||||||||||||| ||||| || |||||| ||||||| |
|
|
| T |
6915647 |
cctttgcttcaagagctttgtataaaacattgtcccaagttgaaaagttccctgcctcaacaccttccttctttgcaaaaattggagattattgattgc |
6915549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 274
Target Start/End: Complemental strand, 6942428 - 6942375
Alignment:
| Q |
221 |
ctgcctcaacaccttccttctttacaaaatctgcagattagtgattgcaacaag |
274 |
Q |
| |
|
||||||||||||||||||||||||||||| ||| ||||| || ||||||||||| |
|
|
| T |
6942428 |
ctgcctcaacaccttccttctttacaaaaactgaagattggttattgcaacaag |
6942375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 115
Target Start/End: Complemental strand, 8453183 - 8453098
Alignment:
| Q |
30 |
ggtttcctctgcttaaagagctttatataagtgattgttccaaattgaaaagagtattgcctcaacatcttccatctttacaaaaa |
115 |
Q |
| |
|
|||||||| |||||||||||||||||||||| || ||| |||||||||||| |||||||||| ||||| |||||||||||| |
|
|
| T |
8453183 |
ggtttcctttgcttaaagagctttatataagagaatgtcccaaattgaaaatgtccctgcctcaacaccttccttctttacaaaaa |
8453098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 6450280 - 6450395
Alignment:
| Q |
31 |
gtttcctctgcttaaagagctttatataagtgattgttccaaattgaaaagagtattgcctcaacatcttccatctttacaaaaactgaagattagtgat |
130 |
Q |
| |
|
||||||||| |||||||||||| | ||||| ||||| ||||| ||||||| | |||||||||| ||||| |||||| ||||| |||||||| | | |
|
|
| T |
6450280 |
gtttcctctacttaaagagcttgaaataagaaattgtcccaaactgaaaagggccctgcctcaacaccttccttctttagaaaaattgaagattgtttgt |
6450379 |
T |
|
| Q |
131 |
tgcaacgagttggagg |
146 |
Q |
| |
|
||||| |||||||||| |
|
|
| T |
6450380 |
tgcaatgagttggagg |
6450395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 6730208 - 6730323
Alignment:
| Q |
31 |
gtttcctctgcttaaagagctttatataagtgattgttccaaattgaaaagagtattgcctcaacatcttccatctttacaaaaactgaagattagtgat |
130 |
Q |
| |
|
||||||||| |||||||||||| | ||||| ||||| ||||| ||||||| | |||||||||| ||||| |||||| ||||| |||||||| | | |
|
|
| T |
6730208 |
gtttcctctacttaaagagcttgaaataagaaattgtcccaaactgaaaagggccctgcctcaacaccttccttctttagaaaaattgaagattgtttgt |
6730307 |
T |
|
| Q |
131 |
tgcaacgagttggagg |
146 |
Q |
| |
|
||||| |||||||||| |
|
|
| T |
6730308 |
tgcaaagagttggagg |
6730323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 87 - 146
Target Start/End: Complemental strand, 6942427 - 6942368
Alignment:
| Q |
87 |
tgcctcaacatcttccatctttacaaaaactgaagattagtgattgcaacgagttggagg |
146 |
Q |
| |
|
|||||||||| ||||| ||||||||||||||||||||| || |||||||| || |||||| |
|
|
| T |
6942427 |
tgcctcaacaccttccttctttacaaaaactgaagattggttattgcaacaagatggagg |
6942368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 272
Target Start/End: Original strand, 6555930 - 6556036
Alignment:
| Q |
166 |
gtttcctttgcttaaagagttttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaatctgcagattagtgat |
265 |
Q |
| |
|
||||||| ||||||||||| ||| |||| ||||||||| |||||||||| | |||||||||| ||||| |||||||||||| || ||| | |||| |
|
|
| T |
6555930 |
gtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaagagtattgcctcaacatcttccatctttacaaaatttgtggatcaatgat |
6556029 |
T |
|
| Q |
266 |
tgcaaca |
272 |
Q |
| |
|
||||||| |
|
|
| T |
6556030 |
tgcaaca |
6556036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 144
Target Start/End: Complemental strand, 7586419 - 7586305
Alignment:
| Q |
30 |
ggtttcctctgcttaaagagctttatataagtgattgttccaaattgaaaagagtattgcctcaacatcttccatctttacaaaaactgaagattagtga |
129 |
Q |
| |
|
|||||||| ||||||||||||||| ||||| | ||| |||| |||||||| | |||||||||| ||||| |||||||| |||||| |||||| || |
|
|
| T |
7586419 |
ggtttcctttgcttaaagagctttctataaaaaaatgtcccaagttgaaaagggctctgcctcaacaccttccttctttacagaaactggagattaaaga |
7586320 |
T |
|
| Q |
130 |
ttgcaacgagttgga |
144 |
Q |
| |
|
|||||| ||||||| |
|
|
| T |
7586319 |
ttgcaagaagttgga |
7586305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 146
Target Start/End: Complemental strand, 6932084 - 6932027
Alignment:
| Q |
89 |
cctcaacatcttccatctttacaaaaactgaagattagtgattgcaacgagttggagg |
146 |
Q |
| |
|
|||||||| ||||| ||||||||||||||| |||||||||||||| || |||| |||| |
|
|
| T |
6932084 |
cctcaacaccttccttctttacaaaaactggagattagtgattgccacaagtttgagg |
6932027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 115
Target Start/End: Complemental strand, 8588360 - 8588275
Alignment:
| Q |
30 |
ggtttcctctgcttaaagagctttatataagtgattgttccaaattgaaaagagtattgcctcaacatcttccatctttacaaaaa |
115 |
Q |
| |
|
|||||||| |||||||| |||| | ||||||||| ||| | |||||||||| | ||||||||||| ||||| |||||||||||| |
|
|
| T |
8588360 |
ggtttcctttgcttaaaaagctatttataagtgaatgtcctgaattgaaaagggctttgcctcaacaccttccttctttacaaaaa |
8588275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 268
Target Start/End: Original strand, 6723536 - 6723660
Alignment:
| Q |
144 |
aggaattgttatgccttggagagtttcctttgcttaaagagttttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttcttt |
243 |
Q |
| |
|
|||||| |||||| |||| || || |||||||| ||||| ||| ||||| | |||||||| | |||||||| | |||||||||||||||||||| || |
|
|
| T |
6723536 |
aggaatggttatgtcttgaaggtttccctttgctacaagagctttgtataaaacattgtcccaagttgaaaagttccctgcctcaacaccttccttcatt |
6723635 |
T |
|
| Q |
244 |
acaaaatctgcagattagtgattgc |
268 |
Q |
| |
|
||||| || |||||| ||||||| |
|
|
| T |
6723636 |
gcaaaaattggagattattgattgc |
6723660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 268
Target Start/End: Complemental strand, 6881088 - 6880964
Alignment:
| Q |
144 |
aggaattgttatgccttggagagtttcctttgcttaaagagttttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttcttt |
243 |
Q |
| |
|
|||||| |||||| |||| || || ||||||||| || || ||| ||||| | |||||||| | |||||||| || || ||||||||||| |||||||| |
|
|
| T |
6881088 |
aggaatggttatgtcttgaaggtttccctttgcttcaaaagctttgtataaaacattgtcccaagttgaaaagtgcccttcctcaacacctcccttcttt |
6880989 |
T |
|
| Q |
244 |
acaaaatctgcagattagtgattgc |
268 |
Q |
| |
|
||||| || |||||| ||||||| |
|
|
| T |
6880988 |
gcaaaaattggagattattgattgc |
6880964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 115
Target Start/End: Complemental strand, 6945821 - 6945731
Alignment:
| Q |
28 |
aaggtttcctctgcttaaagagctttatataagtgattgttccaaattgaaaagag---tattgcctcaacatcttccatctttacaaaaa |
115 |
Q |
| |
|
|||||||||| |||||||||||||| |||||| ||||| ||||||||||||| | | |||||||||| ||||| |||||||||||| |
|
|
| T |
6945821 |
aaggtttcctttgcttaaagagcttactataagaaattgtcccaaattgaaaagggccttgctgcctcaacaccttccttctttacaaaaa |
6945731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 146
Target Start/End: Original strand, 6481477 - 6481583
Alignment:
| Q |
40 |
gcttaaagagctttatataagtgattgttccaaattgaaaagagtattgcctcaacatcttccatctttacaaaaactgaagattagtgattgcaacgag |
139 |
Q |
| |
|
||||||||||||| ||||| |||||| ||||||||||||| | | |||||||| ||||| |||||||| ||| || ||||| | |||||||| || |
|
|
| T |
6481477 |
gcttaaagagcttactataaaagattgtcccaaattgaaaagggcccttcctcaacaccttccttctttacagaaattgtcgattattaattgcaacaag |
6481576 |
T |
|
| Q |
140 |
ttggagg |
146 |
Q |
| |
|
||||||| |
|
|
| T |
6481577 |
ttggagg |
6481583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 268
Target Start/End: Complemental strand, 7748548 - 7748450
Alignment:
| Q |
170 |
cctttgcttaaagagttttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaaatctgcagattagtgattgc |
268 |
Q |
| |
|
||||||||| |||| ||| ||||| | ||||||| | |||||||| | ||||||||||||||||||||||| ||||| || |||||| ||||||| |
|
|
| T |
7748548 |
cctttgcttcgagagctttgtataaaacattgtccgaagttgaaaagttccctgcctcaacaccttccttctttgcaaaaattggagattattgattgc |
7748450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 5248723 - 5248682
Alignment:
| Q |
170 |
cctttgcttaaagagttttctataagaaattgtcccgaattg |
211 |
Q |
| |
|
|||||||||||| || |||||||||||||||||||| ||||| |
|
|
| T |
5248723 |
cctttgcttaaacagctttctataagaaattgtcccaaattg |
5248682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 249
Target Start/End: Complemental strand, 6167469 - 6167364
Alignment:
| Q |
144 |
aggaattgttatgccttggagagtttcctttgcttaaagagttttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttcttt |
243 |
Q |
| |
|
|||||| ||||||||||| || || ||||||||| ||||| ||| | ||| | | |||||| | |||||||| ||||||||||| || ||||||| ||| |
|
|
| T |
6167469 |
aggaatggttatgccttgaaggtttccctttgcttcaagagctttgtctaaaacaatgtcccaagttgaaaagtgctctgcctcatcatcttccttgttt |
6167370 |
T |
|
| Q |
244 |
acaaaa |
249 |
Q |
| |
|
||||| |
|
|
| T |
6167369 |
gcaaaa |
6167364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 268
Target Start/End: Complemental strand, 6140858 - 6140734
Alignment:
| Q |
144 |
aggaattgttatgccttggagagtttcctttgcttaaagagttttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttcttt |
243 |
Q |
| |
|
|||||| ||||||||||| || || ||||||||| ||||| ||| | ||| | | |||||| | |||||||| || |||||||| || ||||||| ||| |
|
|
| T |
6140858 |
aggaatggttatgccttgaaggtttccctttgcttcaagagctttgtctaaaacaatgtcccaagttgaaaagtgccctgcctcatcatcttccttgttt |
6140759 |
T |
|
| Q |
244 |
acaaaatctgcagattagtgattgc |
268 |
Q |
| |
|
||||| || |||||| ||||||| |
|
|
| T |
6140758 |
gcaaaagttggagattattgattgc |
6140734 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0425 (Bit Score: 123; Significance: 3e-63; HSPs: 2)
Name: scaffold0425
Description:
Target: scaffold0425; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 41 - 275
Target Start/End: Original strand, 9123 - 9357
Alignment:
| Q |
41 |
cttaaagagctttatataagtgattgttccaaattgaaaagagtattgcctcaacatcttccatctttacaaaaactgaagattagtgattgcaacgagt |
140 |
Q |
| |
|
||||||||||||| |||| | ||||||| ||||| ||||| |||||||||||||||||||| ||||||| ||| || ||| | | |||||||||||| |
|
|
| T |
9123 |
cttaaagagctttctatatggtattgttctaaattcaaaagggtattgcctcaacatcttccttctttactaaatttgcggatcaattattgcaacgagt |
9222 |
T |
|
| Q |
141 |
tggaggaattgttatgccttggagagtttcctttgcttaaagagttttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttc |
240 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
9223 |
tggaggaatggttatgccttggagagtttcctttgcttaacgagttttctatatccaattgtcccgaattgaaaagggctctgccacaacaccttccttc |
9322 |
T |
|
| Q |
241 |
tttacaaaatctgcagattagtgattgcaacaagt |
275 |
Q |
| |
|
||||||||| || |||| |||||||||||||| |
|
|
| T |
9323 |
tttacaaaaattgttcattaatgattgcaacaagt |
9357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0425; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 14 - 271
Target Start/End: Original strand, 8961 - 9218
Alignment:
| Q |
14 |
gaatggatatgtgtaaggtttcctctgcttaaagagctttatataagtgattgttccaaattgaaaagagtattgcctcaacatcttccatctttacaaa |
113 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||| |||||||||||||||| |||||||||| |
|
|
| T |
8961 |
gaatggatatgtgtaaggtttcctctgcttaaagagctttatatagaaaattgtcctaaattgaaaagcaccctgcctcaacatcttccttctttacaaa |
9060 |
T |
|
| Q |
114 |
aactgaagattagtgattgcaacgagttggaggaattgttatgccttggagagtttcctttgcttaaagagttttctataagaaattgtcccgaattgaa |
213 |
Q |
| |
|
|| ||| ||| || |||||| ||||||||||||| |||||| |||| || ||||| || ||||||||| |||||||| | ||||| | |||| || |
|
|
| T |
9061 |
aattgattatttatggttgcaaagagttggaggaatggttatgtcttgaagggtttctttctcttaaagagctttctatatggtattgttctaaattcaa |
9160 |
T |
|
| Q |
214 |
aagggctctgcctcaacaccttccttctttacaaaatctgcagattagtgattgcaac |
271 |
Q |
| |
|
||||| |||||||||| ||||||||||||| |||| ||| ||| | | |||||||| |
|
|
| T |
9161 |
aagggtattgcctcaacatcttccttctttactaaatttgcggatcaattattgcaac |
9218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1643 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold1643
Description:
Target: scaffold1643; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 166 - 274
Target Start/End: Complemental strand, 720 - 609
Alignment:
| Q |
166 |
gtttcctttgcttaaagagttttctataagaaattgtcccgaattgaaaagggc---tctgcctcaacaccttccttctttacaaaatctgcagattagt |
262 |
Q |
| |
|
||||||||||||||||||| || |||||||||| |||||| |||| ||||||| |||||||||||||||||||| ||||||||| ||| | |||| | |
|
|
| T |
720 |
gtttcctttgcttaaagagcttactataagaaagtgtcccaaattagaaagggccactctgcctcaacaccttccttttttacaaaaactgaatattact |
621 |
T |
|
| Q |
263 |
gattgcaacaag |
274 |
Q |
| |
|
|||||||||||| |
|
|
| T |
620 |
gattgcaacaag |
609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1643; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 87 - 146
Target Start/End: Complemental strand, 661 - 602
Alignment:
| Q |
87 |
tgcctcaacatcttccatctttacaaaaactgaagattagtgattgcaacgagttggagg |
146 |
Q |
| |
|
|||||||||| ||||| | ||||||||||||||| |||| |||||||||| || |||||| |
|
|
| T |
661 |
tgcctcaacaccttccttttttacaaaaactgaatattactgattgcaacaagatggagg |
602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0958 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0958
Description:
Target: scaffold0958; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 248
Target Start/End: Original strand, 1275 - 1357
Alignment:
| Q |
166 |
gtttcctttgcttaaagagttttctataagaaattgtcccgaattgaaaagggctctgcctcaacaccttccttctttacaaa |
248 |
Q |
| |
|
|||||||||||||||| | ||||||||||| |||||| | |||||||||||| || |||| |||||||||||||||||||| |
|
|
| T |
1275 |
gtttcctttgcttaaaaatctttctataagatattgtcgcatattgaaaagggccctacctcgacaccttccttctttacaaa |
1357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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