View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0754_low_23 (Length: 326)

Name: NF0754_low_23
Description: NF0754
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0754_low_23
NF0754_low_23
[»] scaffold0476 (2 HSPs)
scaffold0476 (24-260)||(8056-8291)
scaffold0476 (24-212)||(13145-13332)
[»] chr1 (56 HSPs)
chr1 (15-214)||(16759026-16759225)
chr1 (15-214)||(21861116-21861315)
chr1 (11-214)||(12271924-12272127)
chr1 (15-203)||(21895854-21896043)
chr1 (44-203)||(35260706-35260865)
chr1 (15-178)||(21342484-21342647)
chr1 (15-178)||(21347349-21347512)
chr1 (15-179)||(16367832-16367996)
chr1 (44-179)||(26065329-26065464)
chr1 (44-179)||(41049619-41049754)
chr1 (67-177)||(50687005-50687115)
chr1 (67-179)||(50613714-50613826)
chr1 (67-179)||(50621542-50621654)
chr1 (37-179)||(16093460-16093603)
chr1 (87-179)||(20346215-20346307)
chr1 (20-136)||(28194075-28194191)
chr1 (20-136)||(35981314-35981429)
chr1 (55-179)||(48520979-48521103)
chr1 (43-201)||(21683386-21683545)
chr1 (42-203)||(21533467-21533629)
chr1 (54-179)||(27652806-27652931)
chr1 (54-203)||(52940462-52940611)
chr1 (70-179)||(21042950-21043059)
chr1 (145-214)||(51327174-51327244)
chr1 (22-123)||(22921496-22921597)
chr1 (145-214)||(12328293-12328362)
chr1 (22-125)||(43697749-43697852)
chr1 (70-164)||(22124712-22124806)
chr1 (70-179)||(47191013-47191123)
chr1 (25-125)||(20846862-20846962)
chr1 (25-126)||(20918989-20919090)
chr1 (215-264)||(22830206-22830255)
chr1 (61-122)||(24087807-24087868)
chr1 (25-125)||(21754424-21754524)
chr1 (145-177)||(24726899-24726931)
chr1 (25-125)||(52927613-52927713)
chr1 (67-122)||(16381632-16381687)
chr1 (67-122)||(20958556-20958611)
chr1 (215-258)||(24781917-24781960)
chr1 (47-98)||(38801056-38801107)
chr1 (47-122)||(45307682-45307757)
chr1 (145-176)||(45755010-45755041)
chr1 (47-125)||(22355839-22355917)
chr1 (47-125)||(22357525-22357603)
chr1 (67-125)||(50209887-50209945)
chr1 (61-122)||(14432021-14432082)
chr1 (215-264)||(17677421-17677470)
chr1 (215-264)||(20090241-20090290)
chr1 (61-122)||(20579856-20579917)
chr1 (28-125)||(21027058-21027155)
chr1 (215-264)||(21715809-21715858)
chr1 (215-264)||(22431581-22431630)
chr1 (61-122)||(22899920-22899981)
chr1 (61-122)||(37358860-37358921)
chr1 (61-125)||(20248666-20248730)
chr1 (25-125)||(33681398-33681498)
[»] chr2 (34 HSPs)
chr2 (11-212)||(22459103-22459304)
chr2 (22-179)||(18786437-18786594)
chr2 (44-205)||(22412710-22412872)
chr2 (15-179)||(7298-7463)
chr2 (44-179)||(20519767-20519902)
chr2 (44-179)||(23207689-23207824)
chr2 (42-203)||(25109275-25109438)
chr2 (54-203)||(23005115-23005265)
chr2 (15-179)||(19672237-19672401)
chr2 (20-203)||(23791661-23791845)
chr2 (67-203)||(34137307-34137443)
chr2 (51-179)||(18546546-18546674)
chr2 (42-179)||(43946942-43947079)
chr2 (41-179)||(39827587-39827726)
chr2 (22-125)||(25176231-25176334)
chr2 (11-121)||(23708237-23708347)
chr2 (70-203)||(21243039-21243171)
chr2 (80-161)||(24316112-24316196)
chr2 (80-203)||(23287729-23287852)
chr2 (47-126)||(23071617-23071696)
chr2 (61-122)||(12627559-12627620)
chr2 (145-177)||(14693792-14693824)
chr2 (145-176)||(5985645-5985676)
chr2 (25-124)||(22133849-22133948)
chr2 (214-264)||(21917115-21917165)
chr2 (67-125)||(23660411-23660469)
chr2 (61-122)||(21238775-21238836)
chr2 (61-122)||(21241325-21241386)
chr2 (215-264)||(22757523-22757572)
chr2 (215-264)||(24674776-24674825)
chr2 (215-264)||(24702731-24702780)
chr2 (215-264)||(25962520-25962569)
chr2 (215-264)||(40621028-40621077)
chr2 (133-176)||(44072073-44072117)
[»] chr5 (44 HSPs)
chr5 (15-214)||(20026485-20026684)
chr5 (42-179)||(22177792-22177929)
chr5 (11-122)||(5888793-5888904)
chr5 (20-125)||(21741170-21741275)
chr5 (11-125)||(22144439-22144553)
chr5 (11-125)||(26011652-26011766)
chr5 (52-179)||(26740230-26740357)
chr5 (54-179)||(20572278-20572403)
chr5 (52-203)||(26732417-26732568)
chr5 (54-203)||(25576440-25576589)
chr5 (145-214)||(30616100-30616170)
chr5 (22-125)||(21329124-21329227)
chr5 (22-125)||(21498646-21498749)
chr5 (67-195)||(21327832-21327962)
chr5 (54-195)||(25574054-25574195)
chr5 (54-195)||(25575247-25575388)
chr5 (54-202)||(15796808-15796957)
chr5 (215-264)||(18768814-18768863)
chr5 (215-264)||(22033577-22033626)
chr5 (215-264)||(23573330-23573379)
chr5 (25-125)||(21565933-21566033)
chr5 (67-179)||(25744133-25744245)
chr5 (26-125)||(22959166-22959265)
chr5 (70-164)||(23475887-23475982)
chr5 (25-98)||(19660469-19660542)
chr5 (145-177)||(10953556-10953588)
chr5 (145-176)||(20469563-20469594)
chr5 (145-176)||(25250359-25250390)
chr5 (145-176)||(25314144-25314175)
chr5 (67-125)||(11580919-11580977)
chr5 (67-125)||(21985821-21985879)
chr5 (35-125)||(36154470-36154560)
chr5 (61-122)||(4398099-4398160)
chr5 (215-264)||(14080342-14080391)
chr5 (61-122)||(16255602-16255663)
chr5 (61-122)||(16259235-16259296)
chr5 (61-122)||(22589399-22589460)
chr5 (61-122)||(22592954-22593015)
chr5 (61-122)||(22596509-22596570)
chr5 (61-122)||(26360752-26360813)
chr5 (61-122)||(26496276-26496337)
chr5 (37-110)||(27988496-27988569)
chr5 (61-122)||(29324889-29324950)
chr5 (25-125)||(21292613-21292713)
[»] chr7 (62 HSPs)
chr7 (11-214)||(15113320-15113523)
chr7 (27-165)||(2529611-2529749)
chr7 (66-204)||(12901714-12901853)
chr7 (61-203)||(14045134-14045277)
chr7 (61-203)||(14355164-14355307)
chr7 (42-178)||(17017040-17017176)
chr7 (44-179)||(15008095-15008230)
chr7 (116-214)||(15116857-15116955)
chr7 (69-186)||(1867662-1867779)
chr7 (61-203)||(14036584-14036727)
chr7 (61-203)||(14346614-14346757)
chr7 (11-125)||(2279736-2279850)
chr7 (42-179)||(17059997-17060134)
chr7 (11-125)||(12255409-12255523)
chr7 (54-179)||(9177250-9177375)
chr7 (20-125)||(16056717-16056822)
chr7 (70-202)||(16996588-16996720)
chr7 (54-175)||(16092131-16092253)
chr7 (70-203)||(42462316-42462449)
chr7 (44-179)||(9032919-9033054)
chr7 (67-201)||(11768537-11768671)
chr7 (22-125)||(16219345-16219448)
chr7 (22-121)||(47832201-47832300)
chr7 (153-214)||(15439629-15439691)
chr7 (110-203)||(20219831-20219925)
chr7 (11-124)||(22073306-22073419)
chr7 (25-126)||(28504933-28505034)
chr7 (51-179)||(130396-130524)
chr7 (25-125)||(9389327-9389427)
chr7 (22-125)||(16324395-16324498)
chr7 (67-125)||(15143711-15143769)
chr7 (67-176)||(4071306-4071415)
chr7 (215-264)||(12188284-12188333)
chr7 (215-264)||(17136862-17136911)
chr7 (25-125)||(16385890-16385990)
chr7 (25-125)||(40443766-40443866)
chr7 (11-81)||(15116958-15117028)
chr7 (140-177)||(10659399-10659436)
chr7 (25-98)||(11995690-11995763)
chr7 (67-176)||(15096046-15096155)
chr7 (56-125)||(44014563-44014632)
chr7 (25-85)||(24054895-24054955)
chr7 (25-125)||(27847476-27847576)
chr7 (47-122)||(4993878-4993953)
chr7 (26-125)||(12756350-12756449)
chr7 (145-176)||(14219452-14219483)
chr7 (47-122)||(21064816-21064891)
chr7 (153-202)||(3328276-3328326)
chr7 (47-125)||(15754541-15754619)
chr7 (67-125)||(17061634-17061692)
chr7 (214-264)||(18153643-18153693)
chr7 (67-125)||(38227869-38227927)
chr7 (68-125)||(68135-68192)
chr7 (215-264)||(3272989-3273038)
chr7 (215-264)||(11881517-11881566)
chr7 (215-264)||(12320567-12320616)
chr7 (61-122)||(13733203-13733264)
chr7 (61-122)||(16006809-16006870)
chr7 (25-114)||(18006041-18006130)
chr7 (61-122)||(35366616-35366677)
chr7 (25-125)||(810761-810861)
chr7 (25-125)||(34201172-34201272)
[»] scaffold0165 (1 HSPs)
scaffold0165 (15-214)||(27264-27463)
[»] scaffold0621 (1 HSPs)
scaffold0621 (15-214)||(8845-9044)
[»] scaffold0075 (1 HSPs)
scaffold0075 (20-202)||(53098-53281)
[»] chr4 (40 HSPs)
chr4 (20-202)||(13400-13583)
chr4 (15-179)||(15868256-15868422)
chr4 (42-179)||(46640029-46640166)
chr4 (51-205)||(12287791-12287946)
chr4 (44-179)||(53081748-53081883)
chr4 (42-179)||(17333692-17333829)
chr4 (15-179)||(32851785-32851951)
chr4 (11-149)||(15464547-15464685)
chr4 (11-122)||(43198206-43198317)
chr4 (20-125)||(15099739-15099844)
chr4 (42-179)||(26789749-26789886)
chr4 (54-179)||(15792186-15792311)
chr4 (67-203)||(32306593-32306729)
chr4 (22-125)||(39705917-39706020)
chr4 (51-179)||(26050077-26050205)
chr4 (11-125)||(52242811-52242925)
chr4 (20-125)||(15190706-15190810)
chr4 (54-186)||(14852459-14852591)
chr4 (54-175)||(152484-152605)
chr4 (153-214)||(21189470-21189532)
chr4 (89-176)||(21062109-21062196)
chr4 (145-203)||(35811927-35811986)
chr4 (153-214)||(46643210-46643272)
chr4 (215-264)||(15120602-15120651)
chr4 (25-125)||(12774387-12774487)
chr4 (49-125)||(16597034-16597110)
chr4 (67-179)||(40907463-40907575)
chr4 (22-97)||(13844956-13845031)
chr4 (42-177)||(16043426-16043561)
chr4 (56-125)||(8846764-8846833)
chr4 (215-264)||(23844722-23844771)
chr4 (47-120)||(28383218-28383291)
chr4 (61-122)||(41792063-41792124)
chr4 (25-125)||(7089255-7089355)
chr4 (25-125)||(12903135-12903234)
chr4 (67-123)||(15279759-15279815)
chr4 (215-263)||(16486882-16486930)
chr4 (145-177)||(32466748-32466780)
chr4 (61-125)||(44928591-44928655)
chr4 (145-177)||(51993103-51993135)
[»] chr6 (47 HSPs)
chr6 (15-179)||(20109550-20109714)
chr6 (15-179)||(19023784-19023949)
chr6 (15-179)||(9098071-9098235)
chr6 (11-125)||(23019796-23019910)
chr6 (44-202)||(19668759-19668918)
chr6 (54-179)||(19362835-19362960)
chr6 (52-179)||(20224355-20224482)
chr6 (52-179)||(22118339-22118466)
chr6 (42-179)||(18696898-18697036)
chr6 (42-203)||(33443431-33443593)
chr6 (22-179)||(35008561-35008718)
chr6 (42-179)||(23527699-23527836)
chr6 (22-149)||(25644687-25644814)
chr6 (70-202)||(17229537-17229670)
chr6 (42-122)||(18706706-18706787)
chr6 (54-179)||(18895920-18896046)
chr6 (54-178)||(17106124-17106248)
chr6 (22-125)||(27332913-27333016)
chr6 (22-125)||(27393653-27393756)
chr6 (67-179)||(18453594-18453706)
chr6 (21-177)||(23077145-23077300)
chr6 (37-122)||(23539386-23539471)
chr6 (77-178)||(20137061-20137162)
chr6 (77-178)||(22195707-22195808)
chr6 (25-125)||(1561692-1561792)
chr6 (61-125)||(19652584-19652648)
chr6 (25-125)||(20637926-20638026)
chr6 (145-177)||(24550720-24550752)
chr6 (145-176)||(6083226-6083257)
chr6 (67-126)||(19303215-19303274)
chr6 (145-176)||(31732437-31732468)
chr6 (72-122)||(16830188-16830238)
chr6 (67-125)||(18457103-18457161)
chr6 (47-125)||(20360625-20360703)
chr6 (47-125)||(22080391-22080469)
chr6 (61-122)||(15685769-15685830)
chr6 (72-121)||(16813169-16813218)
chr6 (215-264)||(19864234-19864283)
chr6 (215-264)||(21732012-21732061)
chr6 (215-264)||(21833693-21833742)
chr6 (215-264)||(22404891-22404940)
chr6 (215-264)||(25641025-25641074)
chr6 (61-122)||(29493145-29493206)
chr6 (214-262)||(20906841-20906889)
chr6 (25-85)||(22432678-22432738)
chr6 (25-85)||(22439228-22439288)
chr6 (25-85)||(25641816-25641876)
[»] chr8 (57 HSPs)
chr8 (15-205)||(20498968-20499159)
chr8 (42-179)||(17266565-17266702)
chr8 (15-179)||(982949-983112)
chr8 (37-179)||(13507653-13507795)
chr8 (37-179)||(13597185-13597327)
chr8 (44-177)||(37116761-37116894)
chr8 (44-203)||(24353410-24353570)
chr8 (44-179)||(17439080-17439215)
chr8 (22-179)||(16799900-16800057)
chr8 (42-178)||(22365074-22365211)
chr8 (44-179)||(37116075-37116211)
chr8 (42-195)||(22996240-22996393)
chr8 (44-179)||(40492426-40492562)
chr8 (22-125)||(39834221-39834324)
chr8 (44-179)||(20532981-20533118)
chr8 (67-203)||(22525882-22526019)
chr8 (42-179)||(2418448-2418585)
chr8 (42-195)||(20501674-20501827)
chr8 (54-203)||(23668175-23668323)
chr8 (22-179)||(14102778-14102934)
chr8 (145-214)||(18760880-18760949)
chr8 (67-202)||(17085773-17085908)
chr8 (11-83)||(21286652-21286724)
chr8 (70-201)||(22963040-22963171)
chr8 (22-125)||(38854880-38854983)
chr8 (22-151)||(6520731-6520860)
chr8 (67-179)||(22252763-22252875)
chr8 (25-124)||(21491382-21491481)
chr8 (43-122)||(19154459-19154538)
chr8 (20-93)||(5610265-5610338)
chr8 (25-126)||(5865909-5866010)
chr8 (25-126)||(17141301-17141402)
chr8 (215-264)||(20462458-20462507)
chr8 (215-264)||(20464839-20464888)
chr8 (67-186)||(13661325-13661444)
chr8 (67-186)||(13719968-13720087)
chr8 (67-177)||(19929230-19929340)
chr8 (47-125)||(20536597-20536675)
chr8 (67-179)||(22419012-22419125)
chr8 (129-177)||(25848867-25848916)
chr8 (141-177)||(19699648-19699684)
chr8 (61-125)||(26355366-26355430)
chr8 (145-176)||(17218171-17218202)
chr8 (145-176)||(17907407-17907438)
chr8 (217-264)||(19258399-19258446)
chr8 (62-125)||(21674094-21674157)
chr8 (145-176)||(22254244-22254275)
chr8 (141-176)||(23900539-23900574)
chr8 (214-264)||(11609480-11609530)
chr8 (215-264)||(17342375-17342424)
chr8 (61-122)||(17615309-17615370)
chr8 (215-264)||(19900266-19900315)
chr8 (89-122)||(22385379-22385412)
chr8 (80-178)||(28397963-28398058)
chr8 (61-122)||(28854342-28854403)
chr8 (145-177)||(23418909-23418941)
chr8 (49-125)||(45130687-45130763)
[»] scaffold0413 (1 HSPs)
scaffold0413 (15-204)||(12953-13143)
[»] scaffold0130 (1 HSPs)
scaffold0130 (15-205)||(1325-1516)
[»] scaffold0357 (3 HSPs)
scaffold0357 (44-214)||(13507-13677)
scaffold0357 (67-179)||(3105-3217)
scaffold0357 (100-214)||(15729-15843)
[»] scaffold0022 (2 HSPs)
scaffold0022 (44-205)||(80646-80808)
scaffold0022 (44-203)||(128545-128705)
[»] scaffold0601 (1 HSPs)
scaffold0601 (15-179)||(7065-7230)
[»] scaffold0737 (1 HSPs)
scaffold0737 (44-203)||(1372-1532)
[»] scaffold0010 (4 HSPs)
scaffold0010 (44-179)||(60289-60424)
scaffold0010 (71-202)||(1005-1136)
scaffold0010 (67-176)||(126779-126888)
scaffold0010 (61-125)||(130296-130360)
[»] scaffold0005 (1 HSPs)
scaffold0005 (46-179)||(268062-268196)
[»] chr3 (55 HSPs)
chr3 (42-179)||(23275076-23275213)
chr3 (27-179)||(23412807-23412960)
chr3 (42-177)||(43927517-43927652)
chr3 (44-179)||(22109926-22110061)
chr3 (27-179)||(45797577-45797730)
chr3 (42-201)||(316508-316668)
chr3 (44-179)||(37250763-37250898)
chr3 (15-179)||(14501533-14501699)
chr3 (43-179)||(605941-606077)
chr3 (11-123)||(2050819-2050931)
chr3 (42-177)||(21837836-21837972)
chr3 (20-125)||(1465036-1465141)
chr3 (67-179)||(12378332-12378443)
chr3 (67-179)||(15246432-15246544)
chr3 (31-126)||(42386799-42386894)
chr3 (55-179)||(15265553-15265677)
chr3 (67-178)||(9578014-9578125)
chr3 (67-179)||(15207350-15207462)
chr3 (145-214)||(15447417-15447487)
chr3 (22-123)||(14234881-14234982)
chr3 (43-122)||(324627-324706)
chr3 (22-125)||(15471313-15471416)
chr3 (11-125)||(52523345-52523459)
chr3 (61-129)||(1644351-1644419)
chr3 (215-264)||(16689644-16689693)
chr3 (20-93)||(22791719-22791792)
chr3 (25-125)||(12933942-12934042)
chr3 (67-175)||(37428109-37428217)
chr3 (25-125)||(49389276-49389376)
chr3 (26-125)||(16104169-16104268)
chr3 (47-125)||(17247940-17248018)
chr3 (214-264)||(26189812-26189862)
chr3 (61-122)||(603308-603369)
chr3 (25-98)||(12399611-12399684)
chr3 (25-122)||(14179714-14179811)
chr3 (61-122)||(15009825-15009886)
chr3 (215-264)||(16370689-16370738)
chr3 (215-264)||(16810649-16810698)
chr3 (145-177)||(12512257-12512289)
chr3 (145-177)||(14250562-14250594)
chr3 (140-176)||(16044951-16044987)
chr3 (140-176)||(16059811-16059847)
chr3 (25-125)||(20698079-20698179)
chr3 (67-126)||(9513298-9513357)
chr3 (67-126)||(9521273-9521332)
chr3 (47-122)||(18959286-18959361)
chr3 (214-264)||(320839-320889)
chr3 (67-125)||(14572977-14573035)
chr3 (214-264)||(17673396-17673446)
chr3 (67-125)||(53070373-53070431)
chr3 (153-194)||(16382550-16382591)
chr3 (133-172)||(11563205-11563245)
chr3 (26-98)||(12171750-12171822)
chr3 (25-125)||(49667716-49667815)
chr3 (61-117)||(54047109-54047165)
[»] scaffold0139 (1 HSPs)
scaffold0139 (44-186)||(38701-38843)
[»] scaffold0109 (1 HSPs)
scaffold0109 (27-165)||(35504-35642)
[»] scaffold0021 (4 HSPs)
scaffold0021 (65-179)||(135963-136077)
scaffold0021 (65-179)||(144671-144785)
scaffold0021 (47-125)||(62950-63028)
scaffold0021 (61-122)||(133638-133699)
[»] scaffold0040 (2 HSPs)
scaffold0040 (64-179)||(103254-103369)
scaffold0040 (67-121)||(13788-13842)
[»] scaffold0235 (1 HSPs)
scaffold0235 (15-179)||(13973-14139)
[»] scaffold1351 (1 HSPs)
scaffold1351 (67-203)||(392-529)
[»] scaffold0268 (1 HSPs)
scaffold0268 (27-179)||(569-722)
[»] scaffold0218 (2 HSPs)
scaffold0218 (67-179)||(7695-7807)
scaffold0218 (25-124)||(28912-29011)
[»] scaffold1403 (1 HSPs)
scaffold1403 (45-179)||(961-1095)
[»] scaffold0420 (1 HSPs)
scaffold0420 (44-203)||(5906-6067)
[»] scaffold0123 (1 HSPs)
scaffold0123 (67-180)||(25516-25629)
[»] scaffold0072 (1 HSPs)
scaffold0072 (54-179)||(58226-58351)
[»] scaffold0098 (1 HSPs)
scaffold0098 (15-180)||(29095-29261)
[»] scaffold0004 (3 HSPs)
scaffold0004 (43-179)||(332727-332863)
scaffold0004 (214-264)||(71058-71108)
scaffold0004 (25-85)||(70222-70282)
[»] scaffold0261 (2 HSPs)
scaffold0261 (15-179)||(17887-18054)
scaffold0261 (25-126)||(16046-16147)
[»] scaffold0034 (1 HSPs)
scaffold0034 (11-122)||(32928-33039)
[»] scaffold0009 (1 HSPs)
scaffold0009 (22-179)||(85956-86113)
[»] scaffold0138 (2 HSPs)
scaffold0138 (44-203)||(17811-17972)
scaffold0138 (22-125)||(13329-13432)
[»] scaffold0708 (1 HSPs)
scaffold0708 (91-179)||(2070-2158)
[»] scaffold0260 (1 HSPs)
scaffold0260 (87-179)||(8538-8630)
[»] scaffold0320 (1 HSPs)
scaffold0320 (11-125)||(12384-12498)
[»] scaffold0001 (4 HSPs)
scaffold0001 (70-203)||(497791-497924)
scaffold0001 (70-203)||(446860-446993)
scaffold0001 (26-125)||(161074-161173)
scaffold0001 (214-264)||(421341-421391)
[»] scaffold1419 (1 HSPs)
scaffold1419 (40-202)||(410-573)
[»] scaffold0016 (1 HSPs)
scaffold0016 (42-179)||(119200-119337)
[»] scaffold0012 (2 HSPs)
scaffold0012 (11-125)||(227881-227995)
scaffold0012 (67-179)||(220803-220915)
[»] scaffold0011 (2 HSPs)
scaffold0011 (42-179)||(37726-37863)
scaffold0011 (25-124)||(167622-167721)
[»] scaffold0014 (1 HSPs)
scaffold0014 (42-201)||(206097-206257)
[»] scaffold0914 (1 HSPs)
scaffold0914 (54-203)||(2091-2241)
[»] scaffold0556 (2 HSPs)
scaffold0556 (11-125)||(8405-8519)
scaffold0556 (25-125)||(7200-7300)
[»] scaffold0530 (1 HSPs)
scaffold0530 (22-120)||(657-755)
[»] scaffold0356 (1 HSPs)
scaffold0356 (22-179)||(215-371)
[»] scaffold0106 (1 HSPs)
scaffold0106 (42-164)||(19240-19362)
[»] scaffold0078 (1 HSPs)
scaffold0078 (11-125)||(10917-11031)
[»] scaffold0076 (1 HSPs)
scaffold0076 (42-179)||(24169-24307)
[»] scaffold0077 (1 HSPs)
scaffold0077 (54-179)||(55269-55394)
[»] scaffold0507 (1 HSPs)
scaffold0507 (20-124)||(7684-7788)
[»] scaffold0333 (2 HSPs)
scaffold0333 (22-125)||(7002-7105)
scaffold0333 (22-125)||(14382-14485)
[»] scaffold0046 (2 HSPs)
scaffold0046 (42-203)||(25669-25831)
scaffold0046 (54-203)||(16523-16673)
[»] scaffold2080 (1 HSPs)
scaffold2080 (54-203)||(346-495)
[»] scaffold0071 (1 HSPs)
scaffold0071 (145-214)||(14705-14775)
[»] scaffold0282 (1 HSPs)
scaffold0282 (67-203)||(17785-17921)
[»] scaffold0243 (1 HSPs)
scaffold0243 (22-123)||(5751-5852)
[»] scaffold0081 (1 HSPs)
scaffold0081 (70-175)||(4318-4423)
[»] scaffold0780 (1 HSPs)
scaffold0780 (67-179)||(2946-3058)
[»] scaffold0020 (2 HSPs)
scaffold0020 (22-125)||(15459-15562)
scaffold0020 (215-264)||(179904-179953)
[»] scaffold0750 (1 HSPs)
scaffold0750 (41-179)||(4007-4145)
[»] scaffold0074 (2 HSPs)
scaffold0074 (67-177)||(8574-8684)
scaffold0074 (67-173)||(2615-2721)
[»] scaffold0107 (1 HSPs)
scaffold0107 (42-175)||(13977-14111)
[»] scaffold0080 (4 HSPs)
scaffold0080 (145-214)||(59043-59113)
scaffold0080 (127-177)||(17392-17442)
scaffold0080 (215-264)||(17457-17506)
scaffold0080 (215-264)||(38458-38507)
[»] scaffold0161 (1 HSPs)
scaffold0161 (25-126)||(2077-2178)
[»] scaffold0347 (1 HSPs)
scaffold0347 (42-122)||(9356-9436)
[»] scaffold0150 (1 HSPs)
scaffold0150 (25-125)||(32472-32572)
[»] scaffold0810 (1 HSPs)
scaffold0810 (26-125)||(3321-3420)
[»] scaffold0116 (2 HSPs)
scaffold0116 (47-125)||(43438-43516)
scaffold0116 (47-125)||(47358-47436)
[»] scaffold0029 (1 HSPs)
scaffold0029 (214-264)||(14004-14054)
[»] scaffold0395 (2 HSPs)
scaffold0395 (61-122)||(8160-8221)
scaffold0395 (67-125)||(636-694)
[»] scaffold0293 (1 HSPs)
scaffold0293 (67-120)||(17953-18006)
[»] scaffold0175 (1 HSPs)
scaffold0175 (25-126)||(34508-34609)
[»] scaffold0108 (1 HSPs)
scaffold0108 (67-203)||(3543-3679)
[»] scaffold0555 (2 HSPs)
scaffold0555 (22-110)||(10197-10285)
scaffold0555 (214-264)||(1834-1884)
[»] scaffold0485 (1 HSPs)
scaffold0485 (70-202)||(10517-10649)
[»] scaffold0207 (1 HSPs)
scaffold0207 (61-125)||(2312-2376)
[»] scaffold0028 (1 HSPs)
scaffold0028 (25-125)||(133042-133142)
[»] scaffold1842 (1 HSPs)
scaffold1842 (25-124)||(692-791)
[»] scaffold0561 (1 HSPs)
scaffold0561 (105-179)||(10884-10958)
[»] scaffold0217 (1 HSPs)
scaffold0217 (67-125)||(16273-16331)
[»] scaffold0006 (2 HSPs)
scaffold0006 (44-122)||(97474-97552)
scaffold0006 (44-122)||(106752-106830)
[»] scaffold0351 (1 HSPs)
scaffold0351 (25-98)||(16684-16757)
[»] scaffold0278 (1 HSPs)
scaffold0278 (25-122)||(5985-6082)
[»] scaffold1243 (1 HSPs)
scaffold1243 (145-177)||(554-586)
[»] scaffold0427 (1 HSPs)
scaffold0427 (25-125)||(13873-13973)
[»] scaffold0220 (1 HSPs)
scaffold0220 (89-176)||(17969-18056)
[»] scaffold0145 (1 HSPs)
scaffold0145 (25-125)||(39148-39248)
[»] scaffold0102 (1 HSPs)
scaffold0102 (25-125)||(19655-19755)
[»] scaffold0065 (1 HSPs)
scaffold0065 (145-177)||(53075-53107)
[»] scaffold0859 (2 HSPs)
scaffold0859 (145-176)||(4263-4294)
scaffold0859 (67-107)||(4338-4378)
[»] scaffold0589 (1 HSPs)
scaffold0589 (145-176)||(3854-3885)
[»] scaffold0273 (1 HSPs)
scaffold0273 (22-77)||(9067-9122)
[»] scaffold0211 (1 HSPs)
scaffold0211 (25-124)||(28441-28540)
[»] scaffold0088 (1 HSPs)
scaffold0088 (25-96)||(21308-21379)
[»] scaffold0054 (1 HSPs)
scaffold0054 (77-120)||(75456-75499)
[»] scaffold0042 (1 HSPs)
scaffold0042 (145-176)||(28858-28889)
[»] scaffold0023 (1 HSPs)
scaffold0023 (62-125)||(101783-101846)
[»] scaffold0876 (1 HSPs)
scaffold0876 (47-125)||(2739-2817)
[»] scaffold0839 (1 HSPs)
scaffold0839 (67-125)||(1751-1809)
[»] scaffold0647 (1 HSPs)
scaffold0647 (67-125)||(5795-5853)
[»] scaffold0210 (2 HSPs)
scaffold0210 (215-264)||(20603-20653)
scaffold0210 (215-264)||(28495-28545)
[»] scaffold0169 (1 HSPs)
scaffold0169 (145-203)||(29120-29178)
[»] scaffold0167 (1 HSPs)
scaffold0167 (214-264)||(35199-35249)
[»] scaffold0142 (1 HSPs)
scaffold0142 (67-125)||(17169-17227)
[»] scaffold0056 (2 HSPs)
scaffold0056 (67-125)||(16889-16947)
scaffold0056 (25-125)||(78994-79094)
[»] scaffold0035 (1 HSPs)
scaffold0035 (214-264)||(45571-45621)
[»] scaffold0877 (1 HSPs)
scaffold0877 (67-112)||(1625-1670)
[»] scaffold0757 (1 HSPs)
scaffold0757 (215-264)||(6131-6180)
[»] scaffold0425 (1 HSPs)
scaffold0425 (215-264)||(1417-1466)
[»] scaffold0389 (1 HSPs)
scaffold0389 (25-98)||(13240-13313)
[»] scaffold0358 (2 HSPs)
scaffold0358 (25-98)||(341-414)
scaffold0358 (25-98)||(5117-5190)
[»] scaffold0321 (1 HSPs)
scaffold0321 (129-177)||(424-473)
[»] scaffold0297 (1 HSPs)
scaffold0297 (215-264)||(9652-9701)
[»] scaffold0289 (1 HSPs)
scaffold0289 (215-264)||(3271-3320)
[»] scaffold0151 (1 HSPs)
scaffold0151 (54-107)||(30649-30702)
[»] scaffold0101 (1 HSPs)
scaffold0101 (215-264)||(7773-7822)
[»] scaffold0031 (2 HSPs)
scaffold0031 (215-264)||(64601-64650)
scaffold0031 (25-78)||(65426-65479)
[»] scaffold0718 (1 HSPs)
scaffold0718 (25-125)||(4774-4874)
[»] scaffold0627 (1 HSPs)
scaffold0627 (61-125)||(293-357)
[»] scaffold0598 (1 HSPs)
scaffold0598 (25-125)||(695-795)
[»] scaffold0456 (1 HSPs)
scaffold0456 (49-125)||(10093-10169)
[»] scaffold0403 (1 HSPs)
scaffold0403 (25-125)||(5226-5326)
[»] scaffold0125 (1 HSPs)
scaffold0125 (25-125)||(45421-45521)


Alignment Details
Target: scaffold0476 (Bit Score: 205; Significance: 1e-112; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 24 - 260
Target Start/End: Complemental strand, 8291 - 8056
Alignment:
Q  24 tgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacc 123  Q
    |||||| ||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8291 tgatttcgtaattttgacc-ttaagttgaactttagttgtttctaagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacc 8193  T
Q  124 tgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactcccgagagcaccttgtttcagttcgccatggcgagttgtgagttcgctgtaacgcc 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8192 tgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactcccgagagcaccttgttttagttcgccatggcgagttgtgagttcgctgtaacgcc 8093  T
Q  224 cgctttttattacgtaattatttaatcgagtctagac 260  Q
    | |||||||||| ||||||||||||||||||||||||    
T  8092 cactttttattaagtaattatttaatcgagtctagac 8056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 24 - 212
Target Start/End: Complemental strand, 13332 - 13145
Alignment:
Q  24 tgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacc 123  Q
    |||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13332 tgattttgtaattttgacc-ttaagttgaactttagttgtttatgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacc 13234  T
Q  124 tgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactcccgagagcaccttgtttcagttcgccatggcgagttgtgagttc 212  Q
    | ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  13233 taagaaaatttaaagatggaattttgagtgaaaaatgtcaaactcccgatagcaccttgtttcagttcgccatggcgagttgtgagttc 13145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 152; Significance: 2e-80; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 15 - 214
Target Start/End: Complemental strand, 16759225 - 16759026
Alignment:
Q  15 gagtgaacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattga 114  Q
    |||| |||||||||||||||||||||||||||||| |||| |||| ||||| ||||||||| |||| |||| ||||||||||||||||||||||||||||    
T  16759225 gagtcaacatgattttgtagttttgacccttaagtcgaaccttagatgtttttgagtgcctaaacacgtataataatgattaggcaagtttttagattga 16759126  T
Q  115 gattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactcccgagagcaccttgtttcagttcgccatggcgagttgtgagttcgc 214  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||    
T  16759125 gattgaacctgagaaagtttaaagatggatttttgagtgaaaaatgtcaaactcccgagagcaccctttttcagttcgccatggcgagtagtgagttcgc 16759026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 15 - 214
Target Start/End: Original strand, 21861116 - 21861315
Alignment:
Q  15 gagtgaacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattga 114  Q
    |||| ||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  21861116 gagtcaacatgattttgtagttttgacccttaagttgatctttagatgattctgagtgcctgaacaagtataataatgattaggcaagtttttagattga 21861215  T
Q  115 gattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactcccgagagcaccttgtttcagttcgccatggcgagttgtgagttcgc 214  Q
    ||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||    
T  21861216 gattgaacctgggaaagtttaaaaatggatttttgagtgaaaaatgtcaaactcccgagagcaccctttttcagttcgccatggcgagtagtgagttcgc 21861315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 12272127 - 12271924
Alignment:
Q  11 cagagagtgaacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttaga 110  Q
    |||||||| |||||||||||||||||||||||||||||||||   || | || ||||||||||||||||||||||  |||||  ||| ||||||||||||    
T  12272127 cagagagtcaacatgattttgtagttttgacccttaagttgataattggatgattctgagtgcctgaacatgtatattaatggatagacaagtttttaga 12272028  T
Q  111 ttgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactcccgagagcaccttgtttcagttcgccatggcgagttgtgagt 210  Q
    || |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| | |||| ||||||||||| ||||||||||||||||||    
T  12272027 ttaagattgaacctgagaaagtttaaagatgaaattttgagtgaagaatgtcaaactcccgacaacaccctgtttcagttcaccatggcgagttgtgagt 12271928  T
Q  211 tcgc 214  Q
    ||||    
T  12271927 tcgc 12271924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 15 - 203
Target Start/End: Original strand, 21895854 - 21896043
Alignment:
Q  15 gagtgaacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattga 114  Q
    |||| ||||||||||||||||||||||||||||||||| |||||| || || |||||||||||||| |||| |||||||||||| |||||||||||||||    
T  21895854 gagtcaacatgattttgtagttttgacccttaagttgatctttagatgattatgagtgcctgaacaagtataataatgattaggaaagtttttagattga 21895953  T
Q  115 gattgaacctgagaaagttt-aaagatggaattttgagtgaaaaatgtcaaactcccgagagcaccttgtttcagttcgccatggcgagt 203  Q
    ||||||||||| |||||||| ||| ||||| ||||||||||||||||||||||||| ||||||||| | |||||||||||||| ||||||    
T  21895954 gattgaacctgggaaagtttaaaaaatggatttttgagtgaaaaatgtcaaactcctgagagcaccctttttcagttcgccatagcgagt 21896043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 44 - 203
Target Start/End: Original strand, 35260706 - 35260865
Alignment:
Q  44 ttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatgga 143  Q
    |||||| ||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  35260706 ttaagtcgaactttagatgattctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaaaatgga 35260805  T
Q  144 attttgagtgaaaaatgtcaaactcccgagagcaccttgtttcagttcgccatggcgagt 203  Q
     ||||| ||||||||||||||||||||||||||||| | |||||||||||||| ||||||    
T  35260806 tttttgggtgaaaaatgtcaaactcccgagagcaccctttttcagttcgccatagcgagt 35260865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 15 - 178
Target Start/End: Complemental strand, 21342647 - 21342484
Alignment:
Q  15 gagtgaacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattga 114  Q
    |||| ||||||||||||||||||||||||||||||||||| |||| || || |||||| ||||| |||||| ||||||||||||||||||||||||||||    
T  21342647 gagtcaacatgattttgtagttttgacccttaagttgaaccttagatgattttgagtgtctgaatatgtataataatgattaggcaagtttttagattga 21342548  T
Q  115 gattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactcccgagagcac 178  Q
    || |||||||| |||| ||| || ||||| ||||||||||||||||||||  ||||||||||||    
T  21342547 gaatgaacctgggaaaattttaaaatggatttttgagtgaaaaatgtcaagttcccgagagcac 21342484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 15 - 178
Target Start/End: Complemental strand, 21347512 - 21347349
Alignment:
Q  15 gagtgaacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattga 114  Q
    |||| ||||||||||||||||||||||||||||||||||| |||| || || |||||| ||||| |||||| ||||||||||||||||||||||||||||    
T  21347512 gagtcaacatgattttgtagttttgacccttaagttgaaccttagatgattttgagtgtctgaatatgtataataatgattaggcaagtttttagattga 21347413  T
Q  115 gattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactcccgagagcac 178  Q
    || |||||||| |||| ||| || ||||| ||||||||||||||||||||  ||||||||||||    
T  21347412 gaatgaacctgggaaaattttaaaatggatttttgagtgaaaaatgtcaagttcccgagagcac 21347349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 15 - 179
Target Start/End: Original strand, 16367832 - 16367996
Alignment:
Q  15 gagtgaacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattga 114  Q
    |||| ||||||||||||||  ||||| |||| ||| || |||||| || || |||||||||||| |||||| ||||||||||||||||||||||||||||    
T  16367832 gagtcaacatgattttgtaaatttgatcctttagtcgagctttagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattga 16367931  T
Q  115 gattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
    || ||||||||  |||||||||||||||| ||||| ||||||||||||||| |||||||||||||    
T  16367932 gaatgaacctggaaaagtttaaagatggatttttgggtgaaaaatgtcaaattcccgagagcacc 16367996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 44 - 179
Target Start/End: Complemental strand, 26065464 - 26065329
Alignment:
Q  44 ttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatgga 143  Q
    |||||||||||||||| || | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  26065464 ttaagttgaactttagatgatcctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatgga 26065365  T
Q  144 attttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
     ||||| ||||||||||||||| || | ||||||||    
T  26065364 tttttgggtgaaaaatgtcaaattctcaagagcacc 26065329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 44 - 179
Target Start/End: Original strand, 41049619 - 41049754
Alignment:
Q  44 ttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatgga 143  Q
    |||||| |||| |||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||| || ||| |    
T  41049619 ttaagtcgaaccttagatgtttctgagtgcctgaacatgtataataatggttaggcaagtttttagattgagattgaacctgggaaagtttgaaaatgaa 41049718  T
Q  144 attttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
     ||||| ||||||||||||||| |||||||||||||    
T  41049719 tttttgggtgaaaaatgtcaaattcccgagagcacc 41049754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 67 - 177
Target Start/End: Complemental strand, 50687115 - 50687005
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaac 166  Q
    |||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| |||||||||||||||     
T  50687115 tgagtgcctgtatatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttgggtgaaaaatgtcaaat 50687016  T
Q  167 tcccgagagca 177  Q
    |||||||||||    
T  50687015 tcccgagagca 50687005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 67 - 179
Target Start/End: Original strand, 50613714 - 50613826
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaac 166  Q
    ||||||| |||| |||||| |||||||||||||||||||||||||||||||||||| || ||||||||||| ||| | ||| | |||||||||||||||     
T  50613714 tgagtgcatgaatatgtataataatgattaggcaagtttttagattgagattgaacatgggaaagtttaaaaatgaattttagggtgaaaaatgtcaaat 50613813  T
Q  167 tcccgagagcacc 179  Q
    |||||||||||||    
T  50613814 tcccgagagcacc 50613826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 67 - 179
Target Start/End: Original strand, 50621542 - 50621654
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaac 166  Q
    ||||||| |||| |||||| |||||||||||||||||||||||||||||||||||| || ||||||||||| ||| | ||| | |||||||||||||||     
T  50621542 tgagtgcatgaatatgtataataatgattaggcaagtttttagattgagattgaacatgggaaagtttaaaaatgaattttagggtgaaaaatgtcaaat 50621641  T
Q  167 tcccgagagcacc 179  Q
    |||||||||||||    
T  50621642 tcccgagagcacc 50621654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 37 - 179
Target Start/End: Original strand, 16093460 - 16093603
Alignment:
Q  37 ttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaa 136  Q
    ||||||||| ||| ||  ||||| || || |||||||||| | |||||| ||||||||| |||||||||||||||||||||||||||||  |||||| ||    
T  16093460 ttgaccctttagtcgagttttagatggttttgagtgcctggatatgtataataatgatttggcaagtttttagattgagattgaacctggaaaagttaaa 16093559  T
Q  137 agatggaattttgagtgaaaaatgtc-aaactcccgagagcacc 179  Q
    | ||||| ||||||||||||| |||| |||||||||||||||||    
T  16093560 aaatggatttttgagtgaaaagtgtcaaaactcccgagagcacc 16093603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 87 - 179
Target Start/End: Complemental strand, 20346307 - 20346215
Alignment:
Q  87 ataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||| |||||||||||||| |||||  |||||||||||||    
T  20346307 ataatgattaggcaagtttttagattgagattgatcctgggaaagtttaaaaatggatttttgagtgaaaaaagtcaagttcccgagagcacc 20346215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 28194075 - 28194191
Alignment:
Q  20 aacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattg 119  Q
    ||||||||||||||||||||||| |||||| |||| || | ||||| ||||||||||||| |||||||| ||||||||| ||| || |||||||||||||    
T  28194075 aacatgattttgtagttttgacctttaagtcgaaccttggatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattg 28194174  T
Q  120 aacctgagaaagtttaa 136  Q
    ||||||| | |||||||    
T  28194175 aacctgaaatagtttaa 28194191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 35981314 - 35981429
Alignment:
Q  20 aacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattg 119  Q
    ||||||||||||||||||||||| |||||| |||| || | ||||| ||||||||||||| |||||||| ||||||||| ||| || |||||||||||||    
T  35981314 aacatgattttgtagttttgacctttaagtcgaacctt-gatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattg 35981412  T
Q  120 aacctgagaaagtttaa 136  Q
    |||||| || |||||||    
T  35981413 aacctgggatagtttaa 35981429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 55 - 179
Target Start/End: Complemental strand, 48521103 - 48520979
Alignment:
Q  55 tttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtga 154  Q
    ||||| ||||| ||||| |||||| |||||| |||||||||||||||||||||||||||||||||||| || | ||||| |||   ||| ||||| ||||    
T  48521103 tttagatgtttttgagtacctgaatatgtataataatgattaggcaagtttttagattgagattgaacatggggaagttaaaaatgggatttttgggtga 48521004  T
Q  155 aaaatgtcaaactcccgagagcacc 179  Q
    ||||||||||  |||||||||||||    
T  48521003 aaaatgtcaagttcccgagagcacc 48520979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 201
Target Start/End: Complemental strand, 21683545 - 21683386
Alignment:
Q  43 cttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagat-g 141  Q
    ||||||| || |||||| || || |||||||||||| |||||| | ||||| |||||||||||||||||||| |||| || ||| |||||||||| || |    
T  21683545 cttaagtcgagctttagatgattttgagtgcctgaatatgtataagaatgactaggcaagtttttagattgaaattgtacttgaaaaagtttaaaaatgg 21683446  T
Q  142 gaattttgagtgaaaaatgtcaaactcccgagagcaccttgtttcagttcgccatggcga 201  Q
    || ||||| ||||||||||||||  | |||||||||||  |||| ||||||||| |||||    
T  21683445 gatttttgggtgaaaaatgtcaagtttccgagagcacccagttttagttcgccaaggcga 21683386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 42 - 203
Target Start/End: Original strand, 21533467 - 21533629
Alignment:
Q  42 ccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttag-attgagattgaacctgagaaagtttaaagat 140  Q
    |||||||| || |||||| || || |||||||||||| |||||| | ||||||||||||||||||||| ||||| |||||||||| | ||||| |||       
T  21533467 ccttaagtcgagctttagatgattttgagtgcctgaatatgtataagaatgattaggcaagtttttagaattgaaattgaacctggggaagttaaaaatg 21533566  T
Q  141 ggaattttgagtgaaaaatgtcaaactcccgagagcaccttgtttcagttcgccatggcgagt 203  Q
    ||| ||||| ||||||||||||||  |||||||||||||   ||| ||||||||| |||||||    
T  21533567 ggatttttgggtgaaaaatgtcaagttcccgagagcacccaattttagttcgccaaggcgagt 21533629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 54 - 179
Target Start/End: Original strand, 27652806 - 27652931
Alignment:
Q  54 ctttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatg-gaattttgagt 152  Q
    |||||| ||||| |||||||||||| ||| || |||||||||||||||||||||||||||||||||||| |||| ||| ||||| ||| || ||||| ||    
T  27652806 ctttagatgtttttgagtgcctgaatatgcataataatgattaggcaagtttttagattgagattgaacgtgaggaag-ttaaaaatgagatttttgggt 27652904  T
Q  153 gaaaaatgtcaaactcccgagagcacc 179  Q
    ||||||||||||  | |||||||||||    
T  27652905 gaaaaatgtcaagttaccgagagcacc 27652931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 203
Target Start/End: Original strand, 52940462 - 52940611
Alignment:
Q  54 ctttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatg-gaattttgagt 152  Q
    |||||| || || ||||||||||||||||||| ||||| ||||||||||| |||||||||| |||||||  | | ||| ||||| ||| || ||||| ||    
T  52940462 ctttagatgattttgagtgcctgaacatgtataataataattaggcaagtctttagattgaaattgaacacggggaag-ttaaaaatgagatttttgggt 52940560  T
Q  153 gaaaaatgtcaaactcccgagagcaccttgtttcagttcgccatggcgagt 203  Q
    ||||||||||||  |||||||||||||  |||||||||||| | |||||||    
T  52940561 gaaaaatgtcaagttcccgagagcacccagtttcagttcgctaaggcgagt 52940611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 70 - 179
Target Start/End: Original strand, 21042950 - 21043059
Alignment:
Q  70 gtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaa-ttttgagtgaaaaatgtcaaactc 168  Q
    |||||||||||||||| | |||||||||||||||||||||||||| ||||||| |  | ||| ||||| |||||| ||||| ||||||||||||||  ||    
T  21042950 gtgcctgaacatgtataagaatgattaggcaagtttttagattgaaattgaacatagggaag-ttaaaaatggaatttttgggtgaaaaatgtcaagttc 21043048  T
Q  169 ccgagagcacc 179  Q
    |||||||||||    
T  21043049 ccgagagcacc 21043059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 145 - 214
Target Start/End: Complemental strand, 51327244 - 51327174
Alignment:
Q  145 ttttgagtgaaaaatgtcaaa-ctcccgagagcaccttgtttcagttcgccatggcgagttgtgagttcgc 214  Q
    ||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||| ||||||||||    
T  51327244 ttttgagtgaaaaatgtcaaaactcccgagagcaccctttttcagttcgccatggcgagtagtgagttcgc 51327174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 123
Target Start/End: Original strand, 22921496 - 22921597
Alignment:
Q  22 catgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaa 121  Q
    |||||||| ||| |||||||| || |||||||| |||| ||||| ||||||||||||||||| | |||||||||||| ||| ||  ||||||||||||||    
T  22921496 catgatttcgtaattttgacctttgagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaa 22921595  T
Q  122 cc 123  Q
    ||    
T  22921596 cc 22921597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 214
Target Start/End: Original strand, 12328293 - 12328362
Alignment:
Q  145 ttttgagtgaaaaatgtcaaa-ctcccgagagcaccttgtttcagttcgccatggcgagttgtgagttcgc 214  Q
    ||||||||||||||||||||| |||||||||||||| | |||||||||||||| |||||| ||||||||||    
T  12328293 ttttgagtgaaaaatgtcaaaactcccgagagcaccctttttcagttcgccat-gcgagtagtgagttcgc 12328362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 43697852 - 43697749
Alignment:
Q  22 catgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaa 121  Q
    |||||||| ||| |||||||  ||||||||||| |||| ||||| ||||||||||||||||| |  | ||||||||  ||| || |||||||||||| ||    
T  43697852 catgatttcgtaattttgacttttaagttgaaccttagatgtttttgagtgcctgaacatgtctatttatgattagaaaagattctagattgagatttaa 43697753  T
Q  122 cctg 125  Q
    ||||    
T  43697752 cctg 43697749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 164
Target Start/End: Complemental strand, 22124806 - 22124712
Alignment:
Q  70 gtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaa 164  Q
    |||| ||||||||||| | |||||||||||||||||||||||||| ||||||| |  | ||||| |||   ||| ||||| ||||||||||||||    
T  22124806 gtgcatgaacatgtataagaatgattaggcaagtttttagattgaaattgaacatagggaagttaaaaatgggatttttgggtgaaaaatgtcaa 22124712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 179
Target Start/End: Complemental strand, 47191123 - 47191013
Alignment:
Q  70 gtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatg-gaattttgagtgaaaaatgtcaaactc 168  Q
    |||| |||| |||||| | ||||||||| |||||||||||||||| || |||| || | ||||||||| ||| || ||||  ||||||||||||||| ||    
T  47191123 gtgcatgaatatgtataagaatgattagacaagtttttagattgaaatggaacatggggaagtttaaatatgagattttttggtgaaaaatgtcaaattc 47191024  T
Q  169 ccgagagcacc 179  Q
    | |||||||||    
T  47191023 ctgagagcacc 47191013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 20846862 - 20846962
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||||||| |||||||| || |||||| | |||| || || ||||||||||||||||| | |||||||||||| |||  | |||  |||||||||||||    
T  20846862 gattttgtaattttgacctttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggtaagaatgtaggatgagattgaacct 20846961  T
Q  125 g 125  Q
    |    
T  20846962 g 20846962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 126
Target Start/End: Complemental strand, 20919090 - 20918989
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    |||||| || |||||||| || |||||| | |||  || || ||||||||||||||||| | |||||||||||| |||  | |||| |||||||||||||    
T  20919090 gattttataattttgacctttgagttgatccttacatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 20918991  T
Q  125 ga 126  Q
    ||    
T  20918990 ga 20918989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 22830206 - 22830255
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    |||||| ||| ||||||||||  |||||||||||||||||||||||||||    
T  22830206 tgtaacacccactttttattaattaattatttaatcgagtctagacgagt 22830255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 24087868 - 24087807
Alignment:
Q  61 tgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    ||||| |||| |||||||||||||  |||||||||||||||  ||||||| |||||||||||    
T  24087868 tgtttatgagagcctgaacatgtactataatgattaggcaaagttttagactgagattgaac 24087807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 21754524 - 21754424
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||| ||| |||||||  || |||||| | |||| ||||| ||||||||||||||||| | |||||||||||| ||| ||  |||  ||||||||||||    
T  21754524 gatttcgtatttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaaagagattgaacct 21754425  T
Q  125 g 125  Q
    |    
T  21754424 g 21754424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 177
Target Start/End: Complemental strand, 24726931 - 24726899
Alignment:
Q  145 ttttgagtgaaaaatgtcaaactcccgagagca 177  Q
    |||||||||||||||||||||||||||||||||    
T  24726931 ttttgagtgaaaaatgtcaaactcccgagagca 24726899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 52927613 - 52927713
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||| ||| |||||||  || |||||| | |||| ||||| ||||||||||||||||| | |||||||||| | ||| ||  ||| |||||||||||||    
T  52927613 gatttcgtaattttgacttttgagttgacccttagatgtttttgagtgcctgaacatgtctaataatgattatgaaagattggagaatgagattgaacct 52927712  T
Q  125 g 125  Q
    |    
T  52927713 g 52927713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 122
Target Start/End: Complemental strand, 16381687 - 16381632
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    |||||||||| |||||||| | |||||||||| ||||||||||| ||| |||||||    
T  16381687 tgagtgcctggacatgtataagaatgattaggaaagtttttagaatgaaattgaac 16381632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 122
Target Start/End: Complemental strand, 20958611 - 20958556
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    ||||||||| ||||| ||| | ||| |||||||||||||||||||||| |||||||    
T  20958611 tgagtgccttaacatatataagaattattaggcaagtttttagattgaaattgaac 20958556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 258
Target Start/End: Original strand, 24781917 - 24781960
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctag 258  Q
    |||||||||| ||||||||||  |||||||||||||||||||||    
T  24781917 tgtaacgcccactttttattaattaattatttaatcgagtctag 24781960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 98
Target Start/End: Original strand, 38801056 - 38801107
Alignment:
Q  47 agttgaactttagttgtttctgagtgcctgaacatgtatgataatgattagg 98  Q
    ||||||||||||| ||| | ||||||||||||||||| | ||||||||||||    
T  38801056 agttgaactttagatgtctttgagtgcctgaacatgtctaataatgattagg 38801107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 45307757 - 45307682
Alignment:
Q  47 agttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    |||| ||| |||| ||||| |||| |||||||||||||   ||||||||||||||  |||||||||||| ||||||    
T  45307757 agtttaaccttagatgtttatgagggcctgaacatgtaccttaatgattaggcaaagttttagattgagtttgaac 45307682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 176
Target Start/End: Complemental strand, 45755041 - 45755010
Alignment:
Q  145 ttttgagtgaaaaatgtcaaactcccgagagc 176  Q
    ||||||||||||||||||||||||||||||||    
T  45755041 ttttgagtgaaaaatgtcaaactcccgagagc 45755010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 125
Target Start/End: Original strand, 22355839 - 22355917
Alignment:
Q  47 agttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    |||||||| |||| || || ||||||||||||||||| | |||||||||||| |||  | |||  ||||||||||||||    
T  22355839 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 22355917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 125
Target Start/End: Original strand, 22357525 - 22357603
Alignment:
Q  47 agttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    |||||||| |||| || || ||||||||||||||||| | |||||||||||| |||  | |||  ||||||||||||||    
T  22357525 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 22357603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 125
Target Start/End: Original strand, 50209887 - 50209945
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    ||||||||||||||||| | |||||||||||| |||  | |||| ||||||||||||||    
T  50209887 tgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 50209945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 14432021 - 14432082
Alignment:
Q  61 tgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    ||||| |||| |||||||||||||   ||||||||||||||  ||||||| |||||||||||    
T  14432021 tgtttatgagggcctgaacatgtaccttaatgattaggcaaagttttagaatgagattgaac 14432082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 17677421 - 17677470
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    |||||||||| ||||| ||||  ||||||||||||||||| |||||||||    
T  17677421 tgtaacgcccacttttaattaattaattatttaatcgagtttagacgagt 17677470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 20090241 - 20090290
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    |||||||||| ||||| ||||  |||||||||||| ||||||||||||||    
T  20090241 tgtaacgcccacttttaattaattaattatttaattgagtctagacgagt 20090290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 20579917 - 20579856
Alignment:
Q  61 tgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    ||||| |||| |||||||||||||   ||||||||||||||  ||||||| |||||||||||    
T  20579917 tgtttatgagggcctgaacatgtaccttaatgattaggcaaagttttagaatgagattgaac 20579856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 125
Target Start/End: Complemental strand, 21027155 - 21027058
Alignment:
Q  28 tttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    |||||| |||||||| || |||||| | |||| || || ||||||| ||||||||| | |||||||||||| |||  | |||  ||||||||||||||    
T  21027155 tttgtaattttgacctttgagttgatccttagatgcttttgagtgcttgaacatgtctaataatgattaggtaagaatgtaggatgagattgaacctg 21027058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 21715858 - 21715809
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    |||||||||| ||||| ||||  |||||||||||| ||||||||||||||    
T  21715858 tgtaacgcccacttttaattaattaattatttaattgagtctagacgagt 21715809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 22431581 - 22431630
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    |||||||||| |||||  |||  |||||||||||||||||||||||||||    
T  22431581 tgtaacgcccacttttatttaattaattatttaatcgagtctagacgagt 22431630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 22899920 - 22899981
Alignment:
Q  61 tgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    ||||| |||| |||||||||||||   ||||||||||||||  ||||||| |||||||||||    
T  22899920 tgtttatgagggcctgaacatgtactctaatgattaggcaaagttttagaatgagattgaac 22899981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 37358921 - 37358860
Alignment:
Q  61 tgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    ||||| |||| |||||||||||||   ||||||||||||||  ||||||| |||||||||||    
T  37358921 tgtttatgagggcctgaacatgtaccttaatgattaggcaaagttttagaatgagattgaac 37358860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 125
Target Start/End: Complemental strand, 20248730 - 20248666
Alignment:
Q  61 tgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    ||||| ||||||||||||||||| | |||||||||||| ||| |   ||| ||||||||||||||    
T  20248730 tgtttttgagtgcctgaacatgtctaataatgattaggaaagatcggagaatgagattgaacctg 20248666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 33681498 - 33681398
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||| ||| |||||||  || |||||| | |||| ||||| ||||| |||||| |||| | |||||||||||| ||| ||  ||| |||||||||||||    
T  33681498 gatttcgtaattttgacttttgagttgatccttagatgtttttgagttcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacct 33681399  T
Q  125 g 125  Q
    |    
T  33681398 g 33681398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 146; Significance: 7e-77; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 11 - 212
Target Start/End: Original strand, 22459103 - 22459304
Alignment:
Q  11 cagagagtgaacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttaga 110  Q
    |||||||| ||||||||||||||||||| |||||||||||||   || | ||||||||||||| ||| |||||||  |||||  ||||||||||||||||    
T  22459103 cagagagtcaacatgattttgtagtttttacccttaagttgataattggatgtttctgagtgcttgagcatgtatattaatggataggcaagtttttaga 22459202  T
Q  111 ttgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactcccgagagcaccttgtttcagttcgccatggcgagttgtgagt 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  22459203 ttgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactcccgagagcaccctgtttcagttcgccatggcgagttgtgagt 22459302  T
Q  211 tc 212  Q
    ||    
T  22459303 tc 22459304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 22 - 179
Target Start/End: Original strand, 18786437 - 18786594
Alignment:
Q  22 catgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaa 121  Q
    |||||||||||||||||||||||||||||||||||||| || || |||||||||||||| ||||  || |||||||||||||||||||||||||||||||    
T  18786437 catgattttgtagttttgacccttaagttgaactttagatgattttgagtgcctgaacacgtatattattgattaggcaagtttttagattgagattgaa 18786536  T
Q  122 cctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
    |||||||||||||||| ||||| ||||| ||||||| ||||||| |||||||||||||    
T  18786537 cctgagaaagtttaaaaatggatttttgggtgaaaagtgtcaaattcccgagagcacc 18786594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 44 - 205
Target Start/End: Original strand, 22412710 - 22412872
Alignment:
Q  44 ttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatgga 143  Q
    |||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  22412710 ttaagtcgaactttagatgattctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatgga 22412809  T
Q  144 attttgagtgaaaaatgtcaaactcccgagagcaccttgtttc-agttcgccatggcgagttg 205  Q
     ||||| ||||||||||||||| |||||||||||||  |||||  |||||||| |||||||||    
T  22412810 tttttgggtgaaaaatgtcaaattcccgagagcacccagtttctggttcgccaaggcgagttg 22412872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 15 - 179
Target Start/End: Original strand, 7298 - 7463
Alignment:
Q  15 gagtgaacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattga 114  Q
    |||| ||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||| |||| ||||||||| |||||||||||||||||     
T  7298 gagtaaacatgattttgtagttttgacccttaagttgatctttagatgattctgagtgcctgaacaagtataataatgattcggcaagtttttagattgt 7397  T
Q  115 gattgaacctgagaaagttt-aaagatggaattttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
    ||||||||||  |||||||| ||| ||||| ||||| |||||||||| |||| |||||||||||||    
T  7398 gattgaacctaggaaagtttaaaaaatggatttttgggtgaaaaatgacaaattcccgagagcacc 7463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 44 - 179
Target Start/End: Original strand, 20519767 - 20519902
Alignment:
Q  44 ttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatgga 143  Q
    |||||| ||||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||| ||| |||||    
T  20519767 ttaagtcgaactttagatgatcctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacatgggaaagttaaaaaatgga 20519866  T
Q  144 attttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
     ||||| ||||||||||||||| |||||||||||||    
T  20519867 tttttgggtgaaaaatgtcaaattcccgagagcacc 20519902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 44 - 179
Target Start/End: Complemental strand, 23207824 - 23207689
Alignment:
Q  44 ttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatgga 143  Q
    |||||| ||||||||| || || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||    
T  23207824 ttaagtcgaactttagatgattatgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctaggaaagtttaaaaatgga 23207725  T
Q  144 attttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
     ||||| ||| ||||||||||| |||||||||||||    
T  23207724 tttttgggtggaaaatgtcaaattcccgagagcacc 23207689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 42 - 203
Target Start/End: Complemental strand, 25109438 - 25109275
Alignment:
Q  42 ccttaagttgaactttagttg-tttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagat 140  Q
    |||||||| ||||||||| || |||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||| ||    
T  25109438 ccttaagtcgaactttagatgatttctgagtgactgaacatgtataataatgattaggcaagtttttagattgagattcaacctgcgaaagtttaaaaat 25109339  T
Q  141 ggaattttgagtgaaaaatgtcaaactcccgagagcaccttgtttc-agttcgccatggcgagt 203  Q
    ||| ||||| ||||||||||||||| ||||||||| |||  |||||  |||||||| |||||||    
T  25109338 ggatttttgtgtgaaaaatgtcaaattcccgagagtacccagtttcttgttcgccaaggcgagt 25109275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 54 - 203
Target Start/End: Complemental strand, 23005265 - 23005115
Alignment:
Q  54 ctttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagat-ggaattttgagt 152  Q
    |||||| ||||| ||||||||||||||||||| | ||||||||||||||||||| |||||||||||||| || ||||||||||| || ||| |||| |||    
T  23005265 ctttagatgtttttgagtgcctgaacatgtataagaatgattaggcaagttttttgattgagattgaacttgggaaagtttaaacatgggattttttagt 23005166  T
Q  153 gaaaaatgtcaaactcccgagagcaccttgtttcagttcgccatggcgagt 203  Q
    ||||||||||||  |||||||||||||   ||| ||||||||| |||||||    
T  23005165 gaaaaatgtcaagttcccgagagcacccaattttagttcgccaaggcgagt 23005115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 15 - 179
Target Start/End: Complemental strand, 19672401 - 19672237
Alignment:
Q  15 gagtgaacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattga 114  Q
    |||| ||||| ||||||||| ||||||||||||||||||| |||| || || ||||||  |||| |||||| ||||||||||||||||||||||||||||    
T  19672401 gagtcaacataattttgtagctttgacccttaagttgaaccttagatgattttgagtgtttgaatatgtataataatgattaggcaagtttttagattga 19672302  T
Q  115 gattgaacctgagaaagtttaaagat-ggaattttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
    | ||||||||| | ||||||| | || ||| ||||| ||||||||||||||  |||||||||||||    
T  19672301 gcttgaacctg-ggaagtttagaaataggatttttgggtgaaaaatgtcaagttcccgagagcacc 19672237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 203
Target Start/End: Complemental strand, 23791845 - 23791661
Alignment:
Q  20 aacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattg 119  Q
    |||||||||||||  ||| |  |||||||| ||||||||| || ||| ||||| |||||||| ||| ||||||||||||||||||||||||||| |||||    
T  23791845 aacatgattttgtgatttagctccttaagtcgaactttagatgattcggagtgtctgaacatatataataatgattaggcaagtttttagattgtgattg 23791746  T
Q  120 aacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactcccgagagcaccttgtttc-agttcgccatggcgagt 203  Q
    | | || ||||||||| | ||||| ||||| || ||| |||||||| || ||||||||||  |||||  |||||||| |||||||    
T  23791745 atcttgggaaagtttagaaatggatttttgggtaaaagatgtcaaattctcgagagcacccagtttcttgttcgccaaggcgagt 23791661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 67 - 203
Target Start/End: Complemental strand, 34137443 - 34137307
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaac 166  Q
    ||||||||||||||||||| | ||||||||||||||||||| |||||| ||||||| || | ||||| |||   ||| ||||| ||||||||||||||      
T  34137443 tgagtgcctgaacatgtataagaatgattaggcaagtttttggattgaaattgaacatggggaagttaaaaatgggatttttgggtgaaaaatgtcaagt 34137344  T
Q  167 tcccgagagcaccttgtttcagttcgccatggcgagt 203  Q
    |||||||||||||| ||||| |||||||| |||||||    
T  34137343 tcccgagagcacctagtttctgttcgccaaggcgagt 34137307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 51 - 179
Target Start/End: Original strand, 18546546 - 18546674
Alignment:
Q  51 gaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttga 150  Q
    ||||||||| || || |||||||||||| |||||| | |||||||||||||||||||||||||| ||||||| || | ||||| |||   ||| |||||     
T  18546546 gaactttagatgattttgagtgcctgaatatgtataagaatgattaggcaagtttttagattgaaattgaacatggggaagttaaaaatgggatttttgg 18546645  T
Q  151 gtgaaaaatgtcaaactcccgagagcacc 179  Q
    ||||||||||||||  |||||||||||||    
T  18546646 gtgaaaaatgtcaagttcccgagagcacc 18546674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 43946942 - 43947079
Alignment:
Q  42 ccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatg 141  Q
    |||| ||| ||||||||| || || | |||||  ||| |||||| ||||||||||| |||||||||||||||| ||||||| || ||||| ||||| |||    
T  43946942 cctttagtcgaactttagatgatttttagtgctggaatatgtataataatgattagacaagtttttagattgaaattgaacatgggaaag-ttaaaaatg 43947040  T
Q  142 gaa-ttttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
    ||| ||||| ||||||||||||||| |||||||||||||    
T  43947041 gaatttttgggtgaaaaatgtcaaattcccgagagcacc 43947079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 41 - 179
Target Start/End: Original strand, 39827587 - 39827726
Alignment:
Q  41 cccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagat 140  Q
    ||||| ||| || |||||| || || |||||||||||| |||||| |||||||||||| |||||||||||||||  |||||| || ||||||| |||       
T  39827587 ccctttagtcgagctttagatgattttgagtgcctgaatatgtataataatgattaggaaagtttttagattgaagttgaacatgggaaagttaaaaatg 39827686  T
Q  141 ggaattttgagtgaaaaatgtc-aaactcccgagagcacc 179  Q
    ||| ||||| |||||||||||| ||| |||||||||||||    
T  39827687 ggatttttgggtgaaaaatgtcaaaattcccgagagcacc 39827726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 25176334 - 25176231
Alignment:
Q  22 catgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaa 121  Q
    |||||||| ||| |||||||| || |||||||| |||| ||||| ||||||||||||||||| | || ||||||||| ||| ||  ||||||||||||||    
T  25176334 catgatttcgtaattttgacctttgagttgaaccttagatgtttttgagtgcctgaacatgtctaattatgattaggaaaggttggagattgagattgaa 25176235  T
Q  122 cctg 125  Q
    ||||    
T  25176234 cctg 25176231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 23708237 - 23708347
Alignment:
Q  11 cagagagtgaacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttaga 110  Q
    |||||||| ||| | |||| ||||||||||||||| |||||| |||||| ||||| |||||| |||||||| | |  ||||||||||| |||||  ||||    
T  23708237 cagagagtcaacgtaatttcgtagttttgacccttgagttgatctttagatgtttttgagtgtctgaacatatgtattaatgattaggaaagttcgtaga 23708336  T
Q  111 ttgagattgaa 121  Q
    |||||||||||    
T  23708337 ttgagattgaa 23708347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 70 - 203
Target Start/End: Complemental strand, 21243171 - 21243039
Alignment:
Q  70 gtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactcc 169  Q
    |||||| ||||||||| | |||||||||||||||||| ||||||| ||||||| || | || |  |||   ||| ||||| ||||||||||||||  |||    
T  21243171 gtgccttaacatgtataagaatgattaggcaagtttt-agattgaaattgaacatggggaaatgaaaaatgggatttttgggtgaaaaatgtcaagttcc 21243073  T
Q  170 cgagagcaccttgtttcagttcgccatggcgagt 203  Q
    ||||||||||  ||||| |||||||| |||||||    
T  21243072 cgagagcacccagtttctgttcgccaaggcgagt 21243039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 80 - 161
Target Start/End: Original strand, 24316112 - 24316196
Alignment:
Q  80 atgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtt--taaag-atggaattttgagtgaaaaatgt 161  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||  ||||||  ||||| ||||| ||||| |||||||||||    
T  24316112 atgtataataatgattaggcaagtttttagattgagattgaacttggaaaagttaataaagaatggatttttgggtgaaaaatgt 24316196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 80 - 203
Target Start/End: Complemental strand, 23287852 - 23287729
Alignment:
Q  80 atgtatgataatgattaggcaagtttttaga-ttgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactcccgagagcac 178  Q
    |||||| |||||||||||||||||||||||| |||| |||||| ||| ||| ||| |||   ||| ||||| ||||||||||||||  ||||||||||||    
T  23287852 atgtataataatgattaggcaagtttttagaattgaaattgaatctgggaa-gttaaaaatgggatttttgggtgaaaaatgtcaagttcccgagagcac 23287754  T
Q  179 cttgtttcagttcgccatggcgagt 203  Q
    |   ||| ||||||||| |||||||    
T  23287753 ccaattttagttcgccaaggcgagt 23287729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 126
Target Start/End: Original strand, 23071617 - 23071696
Alignment:
Q  47 agttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctga 126  Q
    |||||||| |||| || || ||||||||||||||||| | |||||||||||| |||  | |||| |||||||||||||||    
T  23071617 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctga 23071696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 12627559 - 12627620
Alignment:
Q  61 tgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    ||||| |||| |||||||||||||  |||||||||||||||  ||||||| |||||||||||    
T  12627559 tgtttatgagagcctgaacatgtactataatgattaggcaaagttttagactgagattgaac 12627620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 177
Target Start/End: Complemental strand, 14693824 - 14693792
Alignment:
Q  145 ttttgagtgaaaaatgtcaaactcccgagagca 177  Q
    |||||||||||||||||||||||||||||||||    
T  14693824 ttttgagtgaaaaatgtcaaactcccgagagca 14693792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 176
Target Start/End: Complemental strand, 5985676 - 5985645
Alignment:
Q  145 ttttgagtgaaaaatgtcaaactcccgagagc 176  Q
    ||||||||||||||||||||||||||||||||    
T  5985676 ttttgagtgaaaaatgtcaaactcccgagagc 5985645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 124
Target Start/End: Original strand, 22133849 - 22133948
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||| ||| |||||||  || |||||| | |||| || || ||||||||||||||||| | |||||||||||| ||| ||  ||| |||||||||||||    
T  22133849 gatttcgtacttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacct 22133948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 264
Target Start/End: Original strand, 21917115 - 21917165
Alignment:
Q  214 ctgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    ||||||||||| |||||  |||  |||||||||||||||||||||||||||    
T  21917115 ctgtaacgcccacttttatttaattaattatttaatcgagtctagacgagt 21917165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 125
Target Start/End: Complemental strand, 23660469 - 23660411
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    ||||||||||||||||| | |||||||||||| |||  | |||| ||||||||||||||    
T  23660469 tgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 23660411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 21238775 - 21238836
Alignment:
Q  61 tgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    ||||| |||| |||||||||||||   ||||||||||||||  ||||||| |||||||||||    
T  21238775 tgtttatgagggcctgaacatgtaccttaatgattaggcaaagttttagaatgagattgaac 21238836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 21241325 - 21241386
Alignment:
Q  61 tgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    ||||| |||| |||||||||||||   ||||||||||||||  ||||||| |||||||||||    
T  21241325 tgtttatgagggcctgaacatgtaccttaatgattaggcaaagttttagaatgagattgaac 21241386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 22757523 - 22757572
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    |||||||||| ||||| ||||  |||||||||||| ||||||||||||||    
T  22757523 tgtaacgcccacttttaattaattaattatttaattgagtctagacgagt 22757572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 24674825 - 24674776
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    |||||||||| |||||  |||  |||||||||||||||||||||||||||    
T  24674825 tgtaacgcccacttttatttaattaattatttaatcgagtctagacgagt 24674776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 24702731 - 24702780
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    |||||||||||||||| ||||  ||||||||||||||||| | |||||||    
T  24702731 tgtaacgcccgcttttaattaattaattatttaatcgagtttggacgagt 24702780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 25962520 - 25962569
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    |||||||||| ||||||||||  |||||||||||| ||||||||| ||||    
T  25962520 tgtaacgcccactttttattaattaattatttaattgagtctagatgagt 25962569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 40621028 - 40621077
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    ||||||| || ||||| ||||  |||||||||||||||||||||||||||    
T  40621028 tgtaacggccacttttaattaattaattatttaatcgagtctagacgagt 40621077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 44072117 - 44072073
Alignment:
Q  133 ttaaagatggaattttgagtgaaaaatgtc-aaactcccgagagc 176  Q
    ||||| |||| ||||||||||||||||||| ||||||||||||||    
T  44072117 ttaaaaatgggattttgagtgaaaaatgtcaaaactcccgagagc 44072073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 144; Significance: 1e-75; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 15 - 214
Target Start/End: Original strand, 20026485 - 20026684
Alignment:
Q  15 gagtgaacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattga 114  Q
    |||| |||||||||||||||||||||||||||||| || |||||| || || ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  20026485 gagtcaacatgattttgtagttttgacccttaagtcgatctttagatgattttgagtgcctgaacatgtataataatgattaggcaagtttttagattga 20026584  T
Q  115 gattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactcccgagagcaccttgtttcagttcgccatggcgagttgtgagttcgc 214  Q
    |||||||| || ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||    
T  20026585 gattgaacatgggaaagtttaaaaatggatttttgagtgaaaaatgtcaaactcccgagagcaccctttttcagttcgccatggcgagtagtgagttcgc 20026684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 22177792 - 22177929
Alignment:
Q  42 ccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatg 141  Q
    |||||||||||||  ||| || || |||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  22177792 ccttaagttgaaccctagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagtttgaacctgagaaagtttaaaaatg 22177891  T
Q  142 gaattttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
    || ||||| ||||||||||||||| |||||||||||||    
T  22177892 gatttttgggtgaaaaatgtcaaattcccgagagcacc 22177929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 5888793 - 5888904
Alignment:
Q  11 cagagagtgaacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttaga 110  Q
    ||||| || ||||||||||||||||||||||| |||||| |||  |||| ||||| ||||||||||||| |||||||| ||||||||| ||| || ||||    
T  5888793 cagagtgtcaacatgattttgtagttttgacctttaagtcgaagcttagatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtaga 5888892  T
Q  111 ttgagattgaac 122  Q
    ||||||||||||    
T  5888893 ttgagattgaac 5888904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 21741170 - 21741275
Alignment:
Q  20 aacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattg 119  Q
    ||||||||||||||||||||||| |||||| |||| |||| | ||| ||||||||||||| |||||||| |||| |||| ||| || |||||||||||||    
T  21741170 aacatgattttgtagttttgacctttaagtcgaaccttagatatttttgagtgcctgaacttgtatgatgatgaataggaaagattatagattgagattg 21741269  T
Q  120 aacctg 125  Q
    ||||||    
T  21741270 aacctg 21741275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 125
Target Start/End: Complemental strand, 22144553 - 22144439
Alignment:
Q  11 cagagagtgaacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttaga 110  Q
    |||||||| |||||||||| |||||||||| ||||||||||   ||||| || || ||||||||||||||||| | | |||||||||| ||| || ||||    
T  22144553 cagagagtcaacatgatttcgtagttttgatccttaagttggtatttagatgattttgagtgcctgaacatgtgtaacaatgattaggaaagattctaga 22144454  T
Q  111 ttgagattgaacctg 125  Q
    |||||||||||||||    
T  22144453 ttgagattgaacctg 22144439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 26011652 - 26011766
Alignment:
Q  11 cagagagtgaacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttaga 110  Q
    |||||||| |||||||||| |||||||||| |||||||||||||||||| || || |||||| || ||||||| | |||||||||| | ||| || || |    
T  26011652 cagagagtcaacatgatttcgtagttttgatccttaagttgaactttagatgattatgagtgtctaaacatgtgtaataatgattaagaaagattctaaa 26011751  T
Q  111 ttgagattgaacctg 125  Q
    |||||||||||||||    
T  26011752 ttgagattgaacctg 26011766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 52 - 179
Target Start/End: Original strand, 26740230 - 26740357
Alignment:
Q  52 aactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac-ctgagaaagtttaaagatggaatttt-g 149  Q
    |||||||| || || ||||||||||||||||||| | |||||||||||||||||||||||||| ||||||| ||| |||   ||||| |||| ||||| |    
T  26740230 aactttagatgattttgagtgcctgaacatgtataagaatgattaggcaagtttttagattgaaattgaactctgggaa--gttaaaaatgggattttgg 26740327  T
Q  150 agtgaaaaatgtcaaactcccgagagcacc 179  Q
    |||||||||||||||  |||||||||||||    
T  26740328 agtgaaaaatgtcaagttcccgagagcacc 26740357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 54 - 179
Target Start/End: Complemental strand, 20572403 - 20572278
Alignment:
Q  54 ctttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtg 153  Q
    |||||| || || |||||| ||||| |||||| | |||||||||||||||||||||||||| ||||||| || | ||||| |||   ||| ||||| |||    
T  20572403 ctttagatgattttgagtgtctgaatatgtataagaatgattaggcaagtttttagattgaaattgaacatgggtaagttaaaaatgggatttttgggtg 20572304  T
Q  154 aaaaatgtcaaactcccgagagcacc 179  Q
    |||||||||||| |||||||||||||    
T  20572303 aaaaatgtcaaattcccgagagcacc 20572278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 203
Target Start/End: Original strand, 26732417 - 26732568
Alignment:
Q  52 aactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaatttt-ga 150  Q
    |||||||| || || ||||||||||||||||||| | |||||||||||||||||||||||||| ||||||| |  | ||| ||||| |||| ||||| ||    
T  26732417 aactttagatgattttgagtgcctgaacatgtataagaatgattaggcaagtttttagattgaaattgaactttgggaag-ttaaaaatgggattttgga 26732515  T
Q  151 gtgaaaaatgtcaaactcccgagagcaccttgtttcagttcgccatggcgagt 203  Q
    ||||||||||||||  | ||||||| |||   ||| ||||||||| |||||||    
T  26732516 gtgaaaaatgtcaactttccgagagtacccattttgagttcgccaaggcgagt 26732568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 203
Target Start/End: Original strand, 25576440 - 25576589
Alignment:
Q  54 ctttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatg-gaattttgagt 152  Q
    |||||| || || ||||||||||||||||||| | ||||||||| |||||||||||||||| ||||||| || | ||  ||| | ||| || ||||| ||    
T  25576440 ctttagatggttttgagtgcctgaacatgtataagaatgattagacaagtttttagattgaaattgaacatggggaa-attataaatgagatttttgggt 25576538  T
Q  153 gaaaaatgtcaaactcccgagagcaccttgtttcagttcgccatggcgagt 203  Q
    ||||||||||||  |||||||||||||  ||||| |||||||| |||||||    
T  25576539 gaaaaatgtcaagttcccgagagcacccagtttctgttcgccacggcgagt 25576589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 145 - 214
Target Start/End: Complemental strand, 30616170 - 30616100
Alignment:
Q  145 ttttgagtgaaaaatgtcaaa-ctcccgagagcaccttgtttcagttcgccatggcgagttgtgagttcgc 214  Q
    ||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||| ||||||||||    
T  30616170 ttttgagtgaaaaatgtcaaaactcccgagagcaccctttttcagttcgccatggcgagtagtgagttcgc 30616100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 125
Target Start/End: Original strand, 21329124 - 21329227
Alignment:
Q  22 catgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaa 121  Q
    |||||||| ||| |||||||| ||||||||||| |||| ||||| ||||||||||||||||| |  | ||||||||  ||| || |||||||||||||||    
T  21329124 catgatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgcctgaacatgtctagttatgattagaaaagattctagattgagattgaa 21329223  T
Q  122 cctg 125  Q
    ||||    
T  21329224 cctg 21329227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 125
Target Start/End: Original strand, 21498646 - 21498749
Alignment:
Q  22 catgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaa 121  Q
    |||||||  ||| |||||||| ||||||||||| || | ||||| ||||||||||||||||||| ||||| ||||||  || || |||||||||||||||    
T  21498646 catgattgcgtaattttgacctttaagttgaaccttggatgtttttgagtgcctgaacatgtataataattattaggagagattgtagattgagattgaa 21498745  T
Q  122 cctg 125  Q
    ||||    
T  21498746 cctg 21498749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 67 - 195
Target Start/End: Original strand, 21327832 - 21327962
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattg-agattgaacctgagaaagtttaaagatggaatttt-gagtgaaaaatgtcaa 164  Q
    |||||||||||| |||||| ||||| ||||||||||||||||||||| | ||||||| |  ||||||| |||  |||| |||| | ||||||||||||||    
T  21327832 tgagtgcctgaatatgtataataattattaggcaagtttttagattgaaaattgaacataggaaagttaaaatttggatttttggggtgaaaaatgtcaa 21327931  T
Q  165 actcccgagagcaccttgtttcagttcgcca 195  Q
      |||||||||||||  ||||| ||||||||    
T  21327932 gttcccgagagcacccagtttctgttcgcca 21327962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 54 - 195
Target Start/End: Original strand, 25574054 - 25574195
Alignment:
Q  54 ctttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatg-gaattttgagt 152  Q
    |||||| || || ||||||||||||||||||| | ||||||||| |||||||||||||||| ||||||| || | ||  ||| | ||| || ||||| ||    
T  25574054 ctttagatggttttgagtgcctgaacatgtataagaatgattagacaagtttttagattgaaattgaacatggggaa-attataaatgagatttttgggt 25574152  T
Q  153 gaaaaatgtcaaactcccgagagcaccttgtttcagttcgcca 195  Q
    ||||||||||||  |||||||||||||  ||||| ||||||||    
T  25574153 gaaaaatgtcaagttcccgagagcacccagtttctgttcgcca 25574195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 54 - 195
Target Start/End: Original strand, 25575247 - 25575388
Alignment:
Q  54 ctttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatg-gaattttgagt 152  Q
    |||||| || || ||||||||||||||||||| | ||||||||| |||||||||||||||| ||||||| || | ||  ||| | ||| || ||||| ||    
T  25575247 ctttagatggttttgagtgcctgaacatgtataagaatgattagacaagtttttagattgaaattgaacatggggaa-attataaatgagatttttgggt 25575345  T
Q  153 gaaaaatgtcaaactcccgagagcaccttgtttcagttcgcca 195  Q
    ||||||||||||  |||||||||||||  ||||| ||||||||    
T  25575346 gaaaaatgtcaagttcccgagagcacccagtttctgttcgcca 25575388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 202
Target Start/End: Complemental strand, 15796957 - 15796808
Alignment:
Q  54 ctttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtg 153  Q
    |||||| || || |||||||| ||| |||||| | |||||||||||||||||||||| |||||||||||    | ||||| |||   ||| ||||| |||    
T  15796957 ctttagatggttttgagtgccagaatatgtataagaatgattaggcaagtttttagactgagattgaacacagggaagttaaaaatgggatttttgggtg 15796858  T
Q  154 aaaaatgtcaaactcccgagagcaccttgttt-cagttcgccatggcgag 202  Q
    |||||||||||  |||||||||||||| ||||  ||||||||| ||||||    
T  15796857 aaaaatgtcaagttcccgagagcacctagtttatagttcgccaaggcgag 15796808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 18768814 - 18768863
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  18768814 tgtaacgcccactttttattaagtaattatttaatcgagtctagacgagt 18768863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 22033626 - 22033577
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    |||||||||| ||||||||||  |||||||||||||||||||||||||||    
T  22033626 tgtaacgcccactttttattaattaattatttaatcgagtctagacgagt 22033577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 23573379 - 23573330
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    |||||||||| ||||||||||  |||||||||||||||||||||||||||    
T  23573379 tgtaacgcccactttttattaattaattatttaatcgagtctagacgagt 23573330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 21566033 - 21565933
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||| ||| |||||||  || |||||| | |||| ||||| ||||||||||||||||| | |||||||||||| ||| ||  ||| |||||||||||||    
T  21566033 gatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacct 21565934  T
Q  125 g 125  Q
    |    
T  21565933 g 21565933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 67 - 179
Target Start/End: Complemental strand, 25744245 - 25744133
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaac 166  Q
    |||||||||||| |||||| | |||||||||| || |||||||| |||||||||||    | ||||| |||   ||| ||||| ||||||||||||||      
T  25744245 tgagtgcctgaatatgtataagaatgattaggtaaatttttagactgagattgaacacagggaagttaaaaatgggatttttgggtgaaaaatgtcaagt 25744146  T
Q  167 tcccgagagcacc 179  Q
    |||||||||||||    
T  25744145 tcccgagagcacc 25744133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 22959166 - 22959265
Alignment:
Q  26 attttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    |||| ||| |||||||  || |||||| | |||| ||||| ||||||||||||||||| | |||||||||||| ||| ||  ||| ||||||||||||||    
T  22959166 atttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctg 22959265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 164
Target Start/End: Complemental strand, 23475982 - 23475887
Alignment:
Q  70 gtgcctgaacatgtatgataatgattaggcaagt-ttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaa 164  Q
    |||||||||||||||| | ||||||||||||||| ||||||||||| ||||||| |  | ||||| |||   ||| ||||| ||||||||||||||    
T  23475982 gtgcctgaacatgtataagaatgattaggcaagttttttagattgaaattgaacatagggaagttaaaaatgggatttttgggtgaaaaatgtcaa 23475887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 19660469 - 19660542
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattagg 98  Q
    ||||||||| |||||||  || |||||||| |||| || || ||||||||||||||||| | ||||||||||||    
T  19660469 gattttgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattagg 19660542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 177
Target Start/End: Complemental strand, 10953588 - 10953556
Alignment:
Q  145 ttttgagtgaaaaatgtcaaactcccgagagca 177  Q
    |||||||||||||||||||||||||||||||||    
T  10953588 ttttgagtgaaaaatgtcaaactcccgagagca 10953556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 176
Target Start/End: Original strand, 20469563 - 20469594
Alignment:
Q  145 ttttgagtgaaaaatgtcaaactcccgagagc 176  Q
    ||||||||||||||||||||||||||||||||    
T  20469563 ttttgagtgaaaaatgtcaaactcccgagagc 20469594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 176
Target Start/End: Original strand, 25250359 - 25250390
Alignment:
Q  145 ttttgagtgaaaaatgtcaaactcccgagagc 176  Q
    ||||||||||||||||||||||||||||||||    
T  25250359 ttttgagtgaaaaatgtcaaactcccgagagc 25250390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 176
Target Start/End: Original strand, 25314144 - 25314175
Alignment:
Q  145 ttttgagtgaaaaatgtcaaactcccgagagc 176  Q
    ||||||||||||||||||||||||||||||||    
T  25314144 ttttgagtgaaaaatgtcaaactcccgagagc 25314175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 125
Target Start/End: Original strand, 11580919 - 11580977
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    ||||||||||||||||| | |||||||||||| |||  | |||| ||||||||||||||    
T  11580919 tgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctg 11580977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 125
Target Start/End: Original strand, 21985821 - 21985879
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    ||||||||||||||||| | |||||||||||| |||  | |||| ||||||||||||||    
T  21985821 tgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 21985879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 125
Target Start/End: Original strand, 36154470 - 36154560
Alignment:
Q  35 ttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    |||||||  ||||||||| | |||| || || ||||||| ||||||||| | |||||||||||| |||  | |||| ||||||||||||||    
T  36154470 ttttgacttttaagttgatccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtagagtgagattgaacctg 36154560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 4398160 - 4398099
Alignment:
Q  61 tgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    ||||| |||| |||||||||||||   ||||||||||||||  ||||||| |||||||||||    
T  4398160 tgtttatgagggcctgaacatgtaccttaatgattaggcaaagttttagaatgagattgaac 4398099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 14080391 - 14080342
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    |||||||||| ||||| ||||  |||||||||||| ||||||||||||||    
T  14080391 tgtaacgcccacttttaattaattaattatttaattgagtctagacgagt 14080342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 16255602 - 16255663
Alignment:
Q  61 tgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    ||||| |||| |||||||||||||   ||||||||||||||  ||||||| |||||||||||    
T  16255602 tgtttatgagggcctgaacatgtactctaatgattaggcaaagttttagaatgagattgaac 16255663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 16259235 - 16259296
Alignment:
Q  61 tgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    ||||| |||| |||||||||||||   ||||||||||||||  ||||||| |||||||||||    
T  16259235 tgtttatgagggcctgaacatgtactctaatgattaggcaaagttttagaatgagattgaac 16259296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 22589399 - 22589460
Alignment:
Q  61 tgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    ||||| |||| |||||||||||||   ||||||||||||||  ||||||| |||||||||||    
T  22589399 tgtttatgagggcctgaacatgtactctaatgattaggcaaagttttagaatgagattgaac 22589460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 22592954 - 22593015
Alignment:
Q  61 tgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    ||||| |||| |||||||||||||   ||||||||||||||  ||||||| |||||||||||    
T  22592954 tgtttatgagggcctgaacatgtactctaatgattaggcaaagttttagaatgagattgaac 22593015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 22596509 - 22596570
Alignment:
Q  61 tgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    ||||| |||| |||||||||||||   ||||||||||||||  ||||||| |||||||||||    
T  22596509 tgtttatgagggcctgaacatgtactctaatgattaggcaaagttttagaatgagattgaac 22596570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 26360752 - 26360813
Alignment:
Q  61 tgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    ||||| |||| |||||||||||||   ||||||||||||||  ||||||| |||||||||||    
T  26360752 tgtttatgagggcctgaacatgtaccttaatgattaggcaaagttttagaatgagattgaac 26360813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 26496337 - 26496276
Alignment:
Q  61 tgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    ||||| |||| |||||||||||||   ||||||||||||||  ||||||| |||||||||||    
T  26496337 tgtttatgagggcctgaacatgtaccttaatgattaggcaaagttttagaatgagattgaac 26496276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 110
Target Start/End: Original strand, 27988496 - 27988569
Alignment:
Q  37 ttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttaga 110  Q
    |||| |||| ||||||||||||| || || | |||||||||| |  ||| | ||||||||||||||||||||||    
T  27988496 ttgatcctttagttgaactttagatggttttaagtgcctgaatacttataagaatgattaggcaagtttttaga 27988569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 29324889 - 29324950
Alignment:
Q  61 tgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    ||||| |||| |||||||||||||   ||||||||||||||  ||||||| |||||||||||    
T  29324889 tgtttatgagggcctgaacatgtaccttaatgattaggcaaagttttagaatgagattgaac 29324950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 21292613 - 21292713
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||| ||| |||||||  || |||||||| |||| || || ||||||||||||||||| | ||||| |||||| |||  | |||  |||||||||||||    
T  21292613 gatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataataattaggaaagaatgtaggatgagattgaacct 21292712  T
Q  125 g 125  Q
    |    
T  21292713 g 21292713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 136; Significance: 6e-71; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 15113523 - 15113320
Alignment:
Q  11 cagagagtgaacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttaga 110  Q
    |||||||| |||||||||||||||||||||||||||| ||||   || | || ||||||||||||||||||||||  |||||  ||||||||||||||||    
T  15113523 cagagagtcaacatgattttgtagttttgacccttaaattgataattggatgattctgagtgcctgaacatgtatattaatggataggcaagtttttaga 15113424  T
Q  111 ttgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactcccgagagcaccttgtttcagttcgccatggcgagttgtgagt 210  Q
    || | |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  15113423 ttaaaattgaatctgagaaagtttaaagatggaattttgagtgaagaatgtcaaactcccgagagcaccctgtttcagttcgccatggcgagttgtgagt 15113324  T
Q  211 tcgc 214  Q
    ||||    
T  15113323 tcgc 15113320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 27 - 165
Target Start/End: Original strand, 2529611 - 2529749
Alignment:
Q  27 ttttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctga 126  Q
    ||||||||||||| |||||||||||||| |||| || || |||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||    
T  2529611 ttttgtagttttgtcccttaagttgaaccttagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattggacctga 2529710  T
Q  127 gaaagtttaaagatggaattttgagtgaaaaatgtcaaa 165  Q
     |||||||||| ||||| |||||||||||||||||||||    
T  2529711 caaagtttaaaaatggatttttgagtgaaaaatgtcaaa 2529749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 66 - 204
Target Start/End: Complemental strand, 12901853 - 12901714
Alignment:
Q  66 ctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaa 165  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| |||||||||||||||    
T  12901853 ctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttgggtgaaaaatgtcaaa 12901754  T
Q  166 ctcccgagagcaccttgtttc-agttcgccatggcgagtt 204  Q
     |||||||||||||  |||||  |||||||| ||||||||    
T  12901753 ttcccgagagcaccaagtttctggttcgccaaggcgagtt 12901714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 61 - 203
Target Start/End: Complemental strand, 14045277 - 14045134
Alignment:
Q  61 tgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatg 160  Q
    ||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| ||||||||||    
T  14045277 tgtttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttgggtgaaaaatg 14045178  T
Q  161 tcaaactcccgagagcaccttgtttc-agttcgccatggcgagt 203  Q
    ||||| |||||||||||||| |||||  |||||||| |||||||    
T  14045177 tcaaattcccgagagcacctagtttcttgttcgccaaggcgagt 14045134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 61 - 203
Target Start/End: Complemental strand, 14355307 - 14355164
Alignment:
Q  61 tgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatg 160  Q
    ||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| ||||||||||    
T  14355307 tgtttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttgggtgaaaaatg 14355208  T
Q  161 tcaaactcccgagagcaccttgtttc-agttcgccatggcgagt 203  Q
    ||||| |||||||||||||| |||||  |||||||| |||||||    
T  14355207 tcaaattcccgagagcacctagtttcttgttcgccaaggcgagt 14355164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 42 - 178
Target Start/End: Original strand, 17017040 - 17017176
Alignment:
Q  42 ccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatg 141  Q
    |||||||||||||||||| || || |||||||||||| |||||  ||||||||||||||||||||||||||||||||||||  ||||||||||||| |||    
T  17017040 ccttaagttgaactttagatgattttgagtgcctgaatatgtacaataatgattaggcaagtttttagattgagattgaacaagagaaagtttaaaaatg 17017139  T
Q  142 gaattttgagtgaaaaatgtcaaactcccgagagcac 178  Q
    || ||||  ||||||||||||||| ||||||||||||    
T  17017140 gattttttggtgaaaaatgtcaaattcccgagagcac 17017176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 44 - 179
Target Start/End: Original strand, 15008095 - 15008230
Alignment:
Q  44 ttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatgga 143  Q
    |||||| ||||||||| || |||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||| |||||||| || |||||    
T  15008095 ttaagtcgaactttagatgattctgagtgcctgaacatgtataataatgattagacaattttttagattgagattgaacctgggaaagttttaaaatgga 15008194  T
Q  144 attttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
     ||||  ||||||||||||||| |||||||||||||    
T  15008195 ttttttggtgaaaaatgtcaaattcccgagagcacc 15008230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 116 - 214
Target Start/End: Complemental strand, 15116955 - 15116857
Alignment:
Q  116 attgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactcccgagagcaccttgtttcagttcgccatggcgagttgtgagttcgc 214  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  15116955 attgaacctgagaaattttaaagatggaattttgagtgaagaatgtcaaactctcgagagcaccctgtttcagttcgccatggcgagttgtgagttcgc 15116857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 69 - 186
Target Start/End: Original strand, 1867662 - 1867779
Alignment:
Q  69 agtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactc 168  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||  |||||||||||||| ||    
T  1867662 agtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttggatgaaaaatgtcaaattc 1867761  T
Q  169 ccgagagcaccttgtttc 186  Q
    |||||||||||| |||||    
T  1867762 ccgagagcacctagtttc 1867779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 61 - 203
Target Start/End: Complemental strand, 14036727 - 14036584
Alignment:
Q  61 tgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatg 160  Q
    ||||| |||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||| ||||| ||||||||||    
T  14036727 tgtttttgagtgcctgaatatgtaaaataatgattaggcaagtttttagattgagattgaacctaggaaagtttaaaaatggatttttgggtgaaaaatg 14036628  T
Q  161 tcaaactcccgagagcaccttgtttc-agttcgccatggcgagt 203  Q
    ||||| |||||||||||||  |||||  |||||||| |||||||    
T  14036627 tcaaattcccgagagcacccagtttcttgttcgccaaggcgagt 14036584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 61 - 203
Target Start/End: Complemental strand, 14346757 - 14346614
Alignment:
Q  61 tgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatg 160  Q
    ||||| |||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||| ||||| ||||||||||    
T  14346757 tgtttttgagtgcctgaatatgtaaaataatgattaggcaagtttttagattgagattgaacctaggaaagtttaaaaatggatttttgggtgaaaaatg 14346658  T
Q  161 tcaaactcccgagagcaccttgtttc-agttcgccatggcgagt 203  Q
    ||||| |||||||||||||  |||||  |||||||| |||||||    
T  14346657 tcaaattcccgagagcacccagtttcttgttcgccaaggcgagt 14346614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 2279736 - 2279850
Alignment:
Q  11 cagagagtgaacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttaga 110  Q
    |||||||| ||| ||||||||||||||||| |||||||||||  ||||| || || |||||||||||||||| || |||||||||||| ||| |||||||    
T  2279736 cagagagtcaacttgattttgtagttttgatccttaagttgatatttagatgattttgagtgcctgaacatgcataataatgattaggaaagattttaga 2279835  T
Q  111 ttgagattgaacctg 125  Q
    |||||||||||||||    
T  2279836 ttgagattgaacctg 2279850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 17059997 - 17060134
Alignment:
Q  42 ccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatg 141  Q
    |||||||| ||||||||| || || |||||| ||||| |||||  ||||||||||  |||||||||||||||||||| ||  |||||||||||||| |||    
T  17059997 ccttaagtcgaactttagatgattttgagtgtctgaatatgtacaataatgattaatcaagtttttagattgagattaaatgtgagaaagtttaaaaatg 17060096  T
Q  142 gaattttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
     | ||||| ||||||| ||||||| |||||||||||||    
T  17060097 aatttttgggtgaaaagtgtcaaattcccgagagcacc 17060134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 12255409 - 12255523
Alignment:
Q  11 cagagagtgaacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttaga 110  Q
    |||||||| |||||||||| |||||||||| ||||||||||   ||||| || || ||||||| ||||||||||| |||||||||||| ||| || ||||    
T  12255409 cagagagtcaacatgatttcgtagttttgatccttaagttggtatttagatgattttgagtgcttgaacatgtataataatgattaggaaagattctaga 12255508  T
Q  111 ttgagattgaacctg 125  Q
    |||||||||||||||    
T  12255509 ttgagattgaacctg 12255523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 54 - 179
Target Start/End: Original strand, 9177250 - 9177375
Alignment:
Q  54 ctttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtg 153  Q
    |||||| ||||| ||||||||||||||||||| | |||||||||| |||||||||||||||||||||||    | ||||| |||   ||| |||||||||    
T  9177250 ctttagatgtttttgagtgcctgaacatgtataagaatgattaggtaagtttttagattgagattgaacgcagggaagttaaaaatgggatttttgagtg 9177349  T
Q  154 aaaaatgtcaaactcccgagagcacc 179  Q
    |||||||| ||| |||||||||||||    
T  9177350 aaaaatgttaaattcccgagagcacc 9177375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 16056822 - 16056717
Alignment:
Q  20 aacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattg 119  Q
    |||||||||| |||||||||| ||||||||||| |||||| || || || || ||||||||||||| ||||||| |||| ||| ||||||||||||||||    
T  16056822 aacatgatttcgtagttttgatccttaagttgagctttaggtgattttgtgtacctgaacatgtataataatgaataggaaagattttagattgagattg 16056723  T
Q  120 aacctg 125  Q
    ||||||    
T  16056722 aacctg 16056717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 70 - 202
Target Start/End: Complemental strand, 16996720 - 16996588
Alignment:
Q  70 gtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaa-ttttgagtgaaaaatgtcaaactc 168  Q
    |||||||||||||||| | |||||||||||||||| ||||||||| ||||||| |  | ||| ||||| |||||| ||||| ||||||||||||||  ||    
T  16996720 gtgcctgaacatgtataagaatgattaggcaagttcttagattgaaattgaacatagggaag-ttaaaaatggaatttttgggtgaaaaatgtcaagttc 16996622  T
Q  169 ccgagagcaccttgtttcagttcgccatggcgag 202  Q
    |||||||||||  |||||||||||||| ||||||    
T  16996621 ccgagagcacccagtttcagttcgccaaggcgag 16996588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 175
Target Start/End: Complemental strand, 16092253 - 16092131
Alignment:
Q  54 ctttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagat-ggaattttgagt 152  Q
    |||||| || || |||||||||||| |||||| | |||||||||| | |||||||||||||||||||||  ||||||||||||| || ||| ||||| ||    
T  16092253 ctttagatgattttgagtgcctgaatatgtataagaatgattaggtaggtttttagattgagattgaacgcgagaaagtttaaaaatgggatttttgggt 16092154  T
Q  153 gaaaaatgtcaaactcccgagag 175  Q
    ||||||||||||  |||||||||    
T  16092153 gaaaaatgtcaagttcccgagag 16092131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 70 - 203
Target Start/End: Complemental strand, 42462449 - 42462316
Alignment:
Q  70 gtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactcc 169  Q
    |||||||||||||||| | |||||||||||||||||||||||||| ||||||| |  | ||||| |||   ||| ||||| ||||||||||||||  ||     
T  42462449 gtgcctgaacatgtataagaatgattaggcaagtttttagattgaaattgaacattgggaagttaaaaatgggatttttgggtgaaaaatgtcaagttct 42462350  T
Q  170 cgagagcaccttgtttcagttcgccatggcgagt 203  Q
    ||||||||||  ||||| |||||||| |||||||    
T  42462349 cgagagcacccagtttctgttcgccaaggcgagt 42462316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 44 - 179
Target Start/End: Original strand, 9032919 - 9033054
Alignment:
Q  44 ttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatgga 143  Q
    |||||| || |||||| || || |||||||||||| |||||| ||||| | ||| |||||||||||||||| ||||||| || | ||||| |||   |||    
T  9032919 ttaagtcgagctttagatgattttgagtgcctgaatatgtataataataactagacaagtttttagattgaaattgaacgtggggaagttaaaaatggga 9033018  T
Q  144 attttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
     ||||| ||||||||||||||| |||||||||||||    
T  9033019 tttttgggtgaaaaatgtcaaattcccgagagcacc 9033054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 67 - 201
Target Start/End: Original strand, 11768537 - 11768671
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttga-gtgaaaaatgtcaaa 165  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||| ||||||| || | ||| ||||| |||| ||||| | |||||||| |||||     
T  11768537 tgagtgcctgaacatgtataagaatgattaggcaagtttttagattgaaattgaacttggggaag-ttaaaaatgggatttttaggtgaaaaaagtcaag 11768635  T
Q  166 ctcccgagagcaccttgtttcagttcgccatggcga 201  Q
     |||||||||||||   ||| ||||||||| |||||    
T  11768636 ttcccgagagcacccaattttagttcgccaaggcga 11768671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 22 - 125
Target Start/End: Original strand, 16219345 - 16219448
Alignment:
Q  22 catgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaa 121  Q
    ||||||||  || |||||||| ||||||||||| |||| ||||| |||||| || ||| ||||| |||||||||||| ||| ||||||||||||||||||    
T  16219345 catgatttcataattttgacctttaagttgaaccttagatgtttttgagtgtctaaacttgtataataatgattaggaaagattttagattgagattgaa 16219444  T
Q  122 cctg 125  Q
    ||||    
T  16219445 cctg 16219448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 121
Target Start/End: Complemental strand, 47832300 - 47832201
Alignment:
Q  22 catgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaa 121  Q
    |||||||| ||| |||||||| ||||||||||| |||| ||||| ||||||||||||||||| | |||||||||||| ||| ||  ||||| ||||||||    
T  47832300 catgatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattaagattgaa 47832201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 153 - 214
Target Start/End: Complemental strand, 15439691 - 15439629
Alignment:
Q  153 gaaaaatgtcaaa-ctcccgagagcaccttgtttcagttcgccatggcgagttgtgagttcgc 214  Q
    ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||    
T  15439691 gaaaaatgtcaaaactcccgagagcacctttttccagttcgccatggcgagttgtgagttcgc 15439629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 110 - 203
Target Start/End: Original strand, 20219831 - 20219925
Alignment:
Q  110 attgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactcccgagagcaccttgtttc-agttcgccatggcgagt 203  Q
    |||||||||||||||| ||||||||||| ||||| ||||| ||||||||||||||| ||| |||||||||  |||||  |||||||| |||||||    
T  20219831 attgagattgaacctgggaaagtttaaaaatggatttttgggtgaaaaatgtcaaattcctgagagcacccagtttcttgttcgccaaggcgagt 20219925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 22073419 - 22073306
Alignment:
Q  11 cagagagtgaacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttaga 110  Q
    ||||||||  ||||| ||| ||||||||| ||||||||||| || ||||  |||| ||||||||||||||||| | |||||||||||  ||| || ||||    
T  22073419 cagagagtcgacatggtttcgtagttttgccccttaagttggaccttagaggtttttgagtgcctgaacatgtgtaataatgattagaaaagattctaga 22073320  T
Q  111 ttgagattgaacct 124  Q
     |||||||||||||    
T  22073319 atgagattgaacct 22073306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 28504933 - 28505034
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||||||| |||||||  || |||||||| |||| ||||| ||||||||||||||||| | |||||||||||| |||  | |||| |||||||||||||    
T  28504933 gattttgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 28505032  T
Q  125 ga 126  Q
    ||    
T  28505033 ga 28505034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 51 - 179
Target Start/End: Original strand, 130396 - 130524
Alignment:
Q  51 gaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttga 150  Q
    ||||||||| || || || |||||||||||||||| | |||||||||| |||||| |||||||| ||||||| |  | ||||| |||   ||| |||||     
T  130396 gaactttagatggttttgggtgcctgaacatgtataagaatgattaggtaagtttctagattgaaattgaacatagggaagttaaaaatgggatttttgg 130495  T
Q  151 gtgaaaaatgtcaaactcccgagagcacc 179  Q
    |||||||| |||||| |||||||||||||    
T  130496 gtgaaaaaggtcaaattcccgagagcacc 130524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 9389327 - 9389427
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||||||| |||||||  ||||||||||| || | ||||| |||||| ||| || ||||| || ||||||||| ||| || ||||||||||||||||||    
T  9389327 gattttgtacttttgacttttaagttgaaccttggatgtttttgagtgtctggacttgtataatgatgattaggaaagattgtagattgagattgaacct 9389426  T
Q  125 g 125  Q
    |    
T  9389427 g 9389427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 16324498 - 16324395
Alignment:
Q  22 catgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaa 121  Q
    |||||||| ||| |||||||| ||||||||||| ||   ||||| ||||||| ||||||||| | |||||||||||| ||| ||  || |||||||||||    
T  16324498 catgatttcgtaattttgacctttaagttgaaccttgaatgtttttgagtgcttgaacatgtctaataatgattaggaaagattggagtttgagattgaa 16324399  T
Q  122 cctg 125  Q
    ||||    
T  16324398 cctg 16324395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 125
Target Start/End: Original strand, 15143711 - 15143769
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    ||||||||||||||||| | |||||||||||| ||| ||||||| ||||||||||||||    
T  15143711 tgagtgcctgaacatgtctaataatgattaggaaagattttagaatgagattgaacctg 15143769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 176
Target Start/End: Complemental strand, 4071415 - 4071306
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaac 166  Q
    ||||||||| ||||||| |   ||||||||||||||||||| |||| || |||  | |  ||||||| |||   ||| ||||||||||||||||||||||    
T  4071415 tgagtgccttaacatgtttagaaatgattaggcaagtttttggattaagtttgggcttaggaaagttaaaaatgggatttttgagtgaaaaatgtcaaac 4071316  T
Q  167 tcccgagagc 176  Q
    ||||||||||    
T  4071315 tcccgagagc 4071306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 12188333 - 12188284
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    |||||||||| ||||||||||  |||||||||||||||||||||||||||    
T  12188333 tgtaacgcccactttttattaattaattatttaatcgagtctagacgagt 12188284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 17136862 - 17136911
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    |||||||||| ||||||||||  |||||||||||||||||||||||||||    
T  17136862 tgtaacgcccactttttattaattaattatttaatcgagtctagacgagt 17136911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 16385890 - 16385990
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||||||| |||||||  || |||||||| |||| || || ||||||||||||||||| | |||||||||||| |||  | |||  |||||||||||||    
T  16385890 gattttgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 16385989  T
Q  125 g 125  Q
    |    
T  16385990 g 16385990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 40443866 - 40443766
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||| ||| |||||||  || |||||||| |||| || || ||||||||||||||||| | |||||||||||| |||  |||||  |||||||||||||    
T  40443866 gatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttaggatgagattgaacct 40443767  T
Q  125 g 125  Q
    |    
T  40443766 g 40443766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 81
Target Start/End: Complemental strand, 15117028 - 15116958
Alignment:
Q  11 cagagagtgaacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacat 81  Q
    |||||||| |||| ||||||||||||||||||||||||||||   || | || |||||||| |||||||||    
T  15117028 cagagagtcaacacgattttgtagttttgacccttaagttgataattggatgattctgagtacctgaacat 15116958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 140 - 177
Target Start/End: Original strand, 10659399 - 10659436
Alignment:
Q  140 tggaattttgagtgaaaaatgtcaaactcccgagagca 177  Q
    |||| |||||||||||||||||||||||||||||||||    
T  10659399 tggatttttgagtgaaaaatgtcaaactcccgagagca 10659436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 11995690 - 11995763
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattagg 98  Q
    ||||| ||| |||||||  || |||||||| |||| ||||| ||||||||||||||||| | ||||||||||||    
T  11995690 gatttcgtatttttgacttttgagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattagg 11995763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 176
Target Start/End: Original strand, 15096046 - 15096155
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaac 166  Q
    ||||||||| ||||||| |   |||||||||||||||||||||||  | ||||  | |  | ||||| |||   ||| ||||||||||||||||||||||    
T  15096046 tgagtgccttaacatgtttagaaatgattaggcaagtttttagatcaaaattgggcatagggaagttaaaaatgggatttttgagtgaaaaatgtcaaac 15096145  T
Q  167 tcccgagagc 176  Q
    ||||||||||    
T  15096146 tcccgagagc 15096155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 44014632 - 44014563
Alignment:
Q  56 ttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    |||| ||||| ||||||||||||||||| | |||||||||||| ||| ||  ||| ||||||||||||||    
T  44014632 ttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctg 44014563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 24054955 - 24054895
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtat 85  Q
    |||||||||||||||||  || |||||||| |||| ||||| |||||||||||| ||||||    
T  24054955 gattttgtagttttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgtat 24054895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 27847476 - 27847576
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||| ||| |||||||  || |||||||| |||| || || ||||||||||||||||| | || ||||||||| |||  |||||  |||||||||||||    
T  27847476 gatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaattatgattaggaaagaatttaggatgagattgaacct 27847575  T
Q  125 g 125  Q
    |    
T  27847576 g 27847576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 4993953 - 4993878
Alignment:
Q  47 agttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    |||| ||| |||| ||||| |||| |||||||||||||   ||||||||||||||  |||||||||||| ||||||    
T  4993953 agtttaaccttagatgtttatgagggcctgaacatgtaccttaatgattaggcaaagttttagattgagtttgaac 4993878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 12756350 - 12756449
Alignment:
Q  26 attttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    |||| ||| |||||||  || |||||| | |||| || || ||||||||||||||||| | |||||||||||| |||  | |||| ||||||||||||||    
T  12756350 atttcgtaattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctg 12756449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 176
Target Start/End: Original strand, 14219452 - 14219483
Alignment:
Q  145 ttttgagtgaaaaatgtcaaactcccgagagc 176  Q
    ||||||||||||||||||||||||||||||||    
T  14219452 ttttgagtgaaaaatgtcaaactcccgagagc 14219483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 21064816 - 21064891
Alignment:
Q  47 agttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    |||| ||| |||| ||||| |||| |||||||||||||  |||||||||||| ||  ||||||| |||||||||||    
T  21064816 agtttaaccttagatgtttatgagggcctgaacatgtacaataatgattaggaaatattttagaatgagattgaac 21064891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 3328326 - 3328276
Alignment:
Q  153 gaaaaatgtcaaa-ctcccgagagcaccttgtttcagttcgccatggcgag 202  Q
    ||||||||||||| |||||||||||||||  ||| ||||||||||||||||    
T  3328326 gaaaaatgtcaaaactcccgagagcacctgttttgagttcgccatggcgag 3328276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 125
Target Start/End: Original strand, 15754541 - 15754619
Alignment:
Q  47 agttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    |||||||| |||| || || ||||||||||||||||| | |||||||||||| |||    |||| ||||||||||||||    
T  15754541 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaagtagaatgagattgaacctg 15754619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 125
Target Start/End: Original strand, 17061634 - 17061692
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    ||||||||||||||||| | |||||||||||| |||  | |||| ||||||||||||||    
T  17061634 tgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctg 17061692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 264
Target Start/End: Original strand, 18153643 - 18153693
Alignment:
Q  214 ctgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    ||||||||||| ||||| ||||  |||||||||||| ||||||||||||||    
T  18153643 ctgtaacgcccacttttaattaattaattatttaattgagtctagacgagt 18153693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 125
Target Start/End: Complemental strand, 38227927 - 38227869
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    ||||||||||||||||| | |||||||||||| |||  | |||| ||||||||||||||    
T  38227927 tgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 38227869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 125
Target Start/End: Complemental strand, 68192 - 68135
Alignment:
Q  68 gagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    ||||||||||| |||| | |||||||||||| ||| ||  ||||||||||||||||||    
T  68192 gagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctg 68135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 3273038 - 3272989
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    |||||||||| ||||| ||||  ||||||||||||||||| |||||||||    
T  3273038 tgtaacgcccacttttaattaattaattatttaatcgagtttagacgagt 3272989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 11881566 - 11881517
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    |||||||||| ||||| ||||  |||||||||||| ||||||||||||||    
T  11881566 tgtaacgcccacttttaattaattaattatttaattgagtctagacgagt 11881517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 12320567 - 12320616
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    |||||||||  |||||| |||  |||||||||||||||||||||||||||    
T  12320567 tgtaacgccaacttttttttaattaattatttaatcgagtctagacgagt 12320616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 13733203 - 13733264
Alignment:
Q  61 tgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    ||||| |||| |||||||||||||   ||||||||||||||  ||||||| |||||||||||    
T  13733203 tgtttatgagggcctgaacatgtaccttaatgattaggcaaagttttagaatgagattgaac 13733264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 16006870 - 16006809
Alignment:
Q  61 tgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    ||||| |||| |||||||||||||   ||||||||||||||  ||||||| |||||||||||    
T  16006870 tgtttatgagggcctgaacatgtaccttaatgattaggcaaagttttagaatgagattgaac 16006809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 114
Target Start/End: Complemental strand, 18006130 - 18006041
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattga 114  Q
    ||||| ||| |||||||  || |||||| | |||| ||||| ||||||||||||||||| | |||||||||| | ||| ||| |||||||    
T  18006130 gatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattatgaaagatttgagattga 18006041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 35366677 - 35366616
Alignment:
Q  61 tgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    ||||| |||| |||||||||||||  | |||||||||||||  ||||||| |||||||||||    
T  35366677 tgtttttgagggcctgaacatgtactacaatgattaggcaaagttttagaatgagattgaac 35366616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 810761 - 810861
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||| ||| |||||||  || |||||| | |||| ||||| ||||||||||||||| | | |||||||||||| ||| ||  ||| | |||||||||||    
T  810761 gatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatatctaataatgattaggaaagattggagaataagattgaacct 810860  T
Q  125 g 125  Q
    |    
T  810861 g 810861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 34201272 - 34201172
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||| ||| |||||||  || |||||||| |||| || || |||||| |||||||||| | |||||||| | | |||  |||||| |||||||||||||    
T  34201272 gatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgtctgaacatgtctaataatgatcaagaaagaatttagaatgagattgaacct 34201173  T
Q  125 g 125  Q
    |    
T  34201172 g 34201172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 128; Significance: 4e-66; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 15 - 214
Target Start/End: Original strand, 27264 - 27463
Alignment:
Q  15 gagtgaacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattga 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||| || || ||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  27264 gagtcaacatgattttttagttttgacccttaagttgaactttagatgattttgagtgcctgaacatgtataataatgattaggcaagtttttagtttga 27363  T
Q  115 gattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactcccgagagcaccttgtttcagttcgccatggcgagttgtgagttcgc 214  Q
    ||||||||||| |||| |||||  ||||| ||||| ||||||||||||||||||||||||||| | | |||||||| |||||||||||| ||||||||||    
T  27364 gattgaacctgggaaattttaagaatggatttttgggtgaaaaatgtcaaactcccgagagcaacctttttcagtttgccatggcgagtagtgagttcgc 27463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 15 - 214
Target Start/End: Complemental strand, 9044 - 8845
Alignment:
Q  15 gagtgaacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattga 114  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||  | || ||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  9044 gagtcaacatgattttgtagttttgacccttaagttgatctttagaagattttgagtgcctgaacatgtataataatgactaggcaagtttttagattga 8945  T
Q  115 gattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactcccgagagcaccttgtttcagttcgccatggcgagttgtgagttcgc 214  Q
     ||| |||| | |||||||| || ||||| |||| |||||||||||||||||||||||||||||| | |||||||||||||||| |||| ||||||||||    
T  8944 cattaaacccgggaaagtttgaaaatggattttttagtgaaaaatgtcaaactcccgagagcaccctttttcagttcgccatggtgagtagtgagttcgc 8845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 20 - 202
Target Start/End: Original strand, 53098 - 53281
Alignment:
Q  20 aacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattg 119  Q
    |||||||||||||| ||||||||||||||||||||||||| || || |||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  53098 aacatgattttgtatttttgacccttaagttgaactttagatgattttgagtgcctgaacaagtataataatgattaggcaagtttttagattgagattg 53197  T
Q  120 aacctgagaaagttt-aaagatggaattttgagtgaaaaatgtcaaactcccgagagcaccttgtttcagttcgccatggcgag 202  Q
    |||||| |||||||| ||| ||||| ||||| |||||| |||||||||||||||||||||| | |||||||||||| |||||||    
T  53198 aacctgggaaagtttaaaaaatggatttttgggtgaaagatgtcaaactcccgagagcaccctttttcagttcgccgtggcgag 53281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 120; Significance: 2e-61; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 20 - 202
Target Start/End: Original strand, 13400 - 13583
Alignment:
Q  20 aacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattg 119  Q
    |||||||||||||| ||||||||||||||||||||||||| || || |||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  13400 aacatgattttgtatttttgacccttaagttgaactttagatgattttgagtgcctgaacaagtataataatgattaggcaagtttttagattgagattg 13499  T
Q  120 aacctgagaaagttt-aaagatggaattttgagtgaaaaatgtcaaactcccgagagcaccttgtttcagttcgccatggcgag 202  Q
    |||||| |||||||| ||| ||||| ||||| |||||| |||||||||||||||||||||| | |||||||||||| |||||||    
T  13500 aacctgggaaagtttaaaaaatggatttttgggtgaaagatgtcaaactcccgagagcaccctttttcagttcgccgtggcgag 13583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 15 - 179
Target Start/End: Original strand, 15868256 - 15868422
Alignment:
Q  15 gagtgaacatgatttt-gtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattg 113  Q
    |||| ||||||||||| ||||||||| |||||||||||||| |||| || || |||||||||||| |||||| |||||||||||| ||||||||||||||    
T  15868256 gagtcaacatgatttttgtagttttgtcccttaagttgaaccttagatgattttgagtgcctgaatatgtataataatgattaggaaagtttttagattg 15868355  T
Q  114 agattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaa-ctcccgagagcacc 179  Q
    |||||||||||| ||||||||||| || || |||||||||||||||||||||  |||||||||||||    
T  15868356 agattgaacctgggaaagtttaaaaatagatttttgagtgaaaaatgtcaaagttcccgagagcacc 15868422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 46640029 - 46640166
Alignment:
Q  42 ccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatg 141  Q
    |||||||| ||||||||| || |||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||  ||||||||||| |||    
T  46640029 ccttaagtcgaactttagatgattctgagtgcctgaacatgtaaaataatgattaggcaagtttttagattgagattaaacctaggaaagtttaaaaatg 46640128  T
Q  142 gaattttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
    || ||||| ||||||||||||||| |||||||||||||    
T  46640129 gatttttgggtgaaaaatgtcaaattcccgagagcacc 46640166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 51 - 205
Target Start/End: Original strand, 12287791 - 12287946
Alignment:
Q  51 gaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttga 150  Q
    |||| |||| ||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||     
T  12287791 gaaccttagatgtttctaagtgtctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttgg 12287890  T
Q  151 gtgaaaaatgtcaaactcccgagagcaccttgtttc-agttcgccatggcgagttg 205  Q
    ||||||||||||||| || ||||||||||  |||||  |||||||| |||||||||    
T  12287891 gtgaaaaatgtcaaattctcgagagcacccagtttctggttcgccaaggcgagttg 12287946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 44 - 179
Target Start/End: Original strand, 53081748 - 53081883
Alignment:
Q  44 ttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatgga 143  Q
    |||||| ||||||||| || |||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||  |||||||||| |||||    
T  53081748 ttaagtcgaactttagatgattctgagtgcctaaacatgtataataatgattaagcaagtttttagattgagattgaacctggaaaagtttaaaaatgga 53081847  T
Q  144 attttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
     |||||  |||||||||||||| |||||||||||||    
T  53081848 tttttggatgaaaaatgtcaaattcccgagagcacc 53081883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 42 - 179
Target Start/End: Complemental strand, 17333829 - 17333692
Alignment:
Q  42 ccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatg 141  Q
    |||| ||| ||||||||| || || |||||||||||| |||||  ||||||||||||||||||||||||||||||||||||  ||||||||||||| |||    
T  17333829 cctttagtcgaactttagatgattttgagtgcctgaatatgtacaataatgattaggcaagtttttagattgagattgaacacgagaaagtttaaaaatg 17333730  T
Q  142 gaattttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
    || |||||  |||||||||||||| |||||||||||||    
T  17333729 gatttttggatgaaaaatgtcaaattcccgagagcacc 17333692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 15 - 179
Target Start/End: Complemental strand, 32851951 - 32851785
Alignment:
Q  15 gagtgaacatgatttt-gtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattg 113  Q
    |||| ||||||||||| || | |||| |||||||||||||| |||| || || |||||||||||| |||||| ||||||||||| |||||||||||||||    
T  32851951 gagtcaacatgatttttgtcgatttgtcccttaagttgaaccttagatgattttgagtgcctgaatatgtataataatgattagacaagtttttagattg 32851852  T
Q  114 agattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaa-ctcccgagagcacc 179  Q
    |||||| ||||| ||| ||||||| ||||| ||||||| ||||||| |||||  |||||||||||||    
T  32851851 agattggacctgggaaggtttaaaaatggatttttgagcgaaaaatatcaaagttcccgagagcacc 32851785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 11 - 149
Target Start/End: Original strand, 15464547 - 15464685
Alignment:
Q  11 cagagagtgaacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttaga 110  Q
    |||||||| ||||| |||| ||||||||||||||||||||||  ||||| || || |||||||||||| |||||| |||||||||||| ||| |||||||    
T  15464547 cagagagtcaacataatttcgtagttttgacccttaagttgatatttagatgattttgagtgcctgaatatgtataataatgattaggaaagattttaga 15464646  T
Q  111 ttgagattgaacctgagaaagtttaaagatggaattttg 149  Q
    |||||||||||||||| | |||||||  ||||| |||||    
T  15464647 ttgagattgaacctgaaatagtttaagaatggatttttg 15464685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 43198206 - 43198317
Alignment:
Q  11 cagagagtgaacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttaga 110  Q
    |||||||| | |||||||| |||||||||||||||||||| ||| |||| ||||| ||||||||||||||||| | |||||||||||| ||| |||||||    
T  43198206 cagagagtcagcatgatttcgtagttttgacccttaagttaaaccttagatgtttttgagtgcctgaacatgtgtaataatgattaggaaagattttaga 43198305  T
Q  111 ttgagattgaac 122  Q
    ||||||||||||    
T  43198306 ttgagattgaac 43198317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 15099844 - 15099739
Alignment:
Q  20 aacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattg 119  Q
    ||||||||||||||||||||||| |||||| |||| |||| ||||| ||||||||||||| |||||||| ||||||||| ||| || |||||||||||||    
T  15099844 aacatgattttgtagttttgacctttaagtcgaaccttagatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattg 15099745  T
Q  120 aacctg 125  Q
    ||||||    
T  15099744 aacctg 15099739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 42 - 179
Target Start/End: Complemental strand, 26789886 - 26789749
Alignment:
Q  42 ccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatg 141  Q
    |||||||| || |||||| || || |||||||||||| |||||| |||| ||||||||||||||||||||||| ||||||| || ||||||||||| |||    
T  26789886 ccttaagtcgagctttagatgattttgagtgcctgaatatgtataataacgattaggcaagtttttagattgaaattgaacatgggaaagtttaaa-atg 26789788  T
Q  142 -gaattttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
     || ||||| ||||||||| ||||| |||||||||||||    
T  26789787 tgatttttgggtgaaaaatatcaaattcccgagagcacc 26789749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 54 - 179
Target Start/End: Complemental strand, 15792311 - 15792186
Alignment:
Q  54 ctttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatg-gaattttgagt 152  Q
    |||||| || || |||||| ||||| |||||| |||||||||||||||||||||||||||| ||||||| || ||||| ||||| ||| || ||||| ||    
T  15792311 ctttagatgattttgagtgtctgaatatgtataataatgattaggcaagtttttagattgaaattgaacatgggaaag-ttaaaaatgagatttttgggt 15792213  T
Q  153 gaaaaatgtcaaactcccgagagcacc 179  Q
    ||||||||||||| |||||||||||||    
T  15792212 gaaaaatgtcaaattcccgagagcacc 15792186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 67 - 203
Target Start/End: Original strand, 32306593 - 32306729
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatg-gaattttgagtgaaaaatgtcaaa 165  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||  | | ||| ||||| ||| || ||||||||||||||||||||     
T  32306593 tgagtgcctaaacatgtataataatgattaggcaagtttttagattgaaattgaacacggggaag-ttaaaaatgagatttttgagtgaaaaatgtcaag 32306691  T
Q  166 ctcccgagagcaccttgtttcagttcgccatggcgagt 203  Q
     |||||||| ||||  ||| |||||||||| |||||||    
T  32306692 ttcccgagatcacccagttccagttcgccaaggcgagt 32306729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 22 - 125
Target Start/End: Original strand, 39705917 - 39706020
Alignment:
Q  22 catgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaa 121  Q
    |||||||| ||| |||||||| ||||||||||| |||| ||||| ||||||||||||||||| | |||||||||||| ||| ||  ||||| ||||||||    
T  39705917 catgatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattgaagattaagattgaa 39706016  T
Q  122 cctg 125  Q
    ||||    
T  39706017 cctg 39706020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 179
Target Start/End: Original strand, 26050077 - 26050205
Alignment:
Q  51 gaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaa-ttttg 149  Q
    ||||||||| || || || |||||||||||||||| | |||||||||||||||| ||||||||| ||||||| |  | ||| ||||| ||| || |||||    
T  26050077 gaactttagatgattttgggtgcctgaacatgtataagaatgattaggcaagttcttagattgaaattgaacatagggaag-ttaaaaatgaaatttttg 26050175  T
Q  150 agtgaaaaatgtcaaactcccgagagcacc 179  Q
    |||||||||||||||  |||||||||||||    
T  26050176 agtgaaaaatgtcaagttcccgagagcacc 26050205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 52242811 - 52242925
Alignment:
Q  11 cagagagtgaacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttaga 110  Q
    |||||||| |||||||||| |||||||||| | ||||||||   ||||| || ||  |||||||||||||||||| |||||||| ||| ||| || ||||    
T  52242811 cagagagtcaacatgatttcgtagttttgatctttaagttggtatttagatgatttcgagtgcctgaacatgtataataatgatcaggaaagattctaga 52242910  T
Q  111 ttgagattgaacctg 125  Q
     ||||||||||||||    
T  52242911 atgagattgaacctg 52242925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 15190810 - 15190706
Alignment:
Q  20 aacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattg 119  Q
    |||||||||||||||||| |||| |||||| |||| |||| ||||| ||||||||||||||||| | || ||||||||  ||| || ||||||||||||     
T  15190810 aacatgattttgtagttt-gacctttaagtcgaaccttagatgtttttgagtgcctgaacatgtctaattatgattagaaaaggttctagattgagattt 15190712  T
Q  120 aacctg 125  Q
    ||||||    
T  15190711 aacctg 15190706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 186
Target Start/End: Original strand, 14852459 - 14852591
Alignment:
Q  54 ctttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtg 153  Q
    |||||| || || |||||||||| |||||||| | ||||||||||||||||| |||||| | ||||||| || | ||||| ||||  ||| |||||  ||    
T  14852459 ctttagatgattttgagtgcctggacatgtataagaatgattaggcaagtttatagattaaaattgaacatggggaagttaaaagtgggatttttggatg 14852558  T
Q  154 aaaaatgtcaaactcccgagagcaccttgtttc 186  Q
    ||||| |||||  |||||||||||||| |||||    
T  14852559 aaaaacgtcaagttcccgagagcacctagtttc 14852591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 175
Target Start/End: Complemental strand, 152605 - 152484
Alignment:
Q  54 ctttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatg-gaattttgagt 152  Q
    |||||| || || |||||||||||| |||||| | |||||||||||||||||||||||||| ||||||| || | ||| ||||| ||| || ||||  ||    
T  152605 ctttagatgattttgagtgcctgaatatgtataagaatgattaggcaagtttttagattgaaattgaacatggggaag-ttaaaaatgagatttttaggt 152507  T
Q  153 gaaaaatgtcaaactcccgagag 175  Q
    ||||||||||||  |||||||||    
T  152506 gaaaaatgtcaagttcccgagag 152484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 153 - 214
Target Start/End: Original strand, 21189470 - 21189532
Alignment:
Q  153 gaaaaatgtcaaa-ctcccgagagcaccttgtttcagttcgccatggcgagttgtgagttcgc 214  Q
    ||||||||||||| |||||||||||||||  |||| ||||||||||||| |||||||||||||    
T  21189470 gaaaaatgtcaaaactcccgagagcacctattttctgttcgccatggcgggttgtgagttcgc 21189532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 21062196 - 21062109
Alignment:
Q  89 aatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaa-ttttgagtgaaaaatgtcaaactcccgagagc 176  Q
    ||||||||||||||||||| |||| || ||| || |  | ||| ||||| |||||| ||||||||||||||||||||||||||||||||    
T  21062196 aatgattaggcaagtttttggattaagtttggacttagggaag-ttaaaaatggaatttttgagtgaaaaatgtcaaactcccgagagc 21062109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 35811927 - 35811986
Alignment:
Q  145 ttttgagtgaaaaatgtcaaa-ctcccgagagcaccttgtttcagttcgccatggcgagt 203  Q
    ||||||||||||||||||||| |||| ||||||||| | |||||||||||| ||||||||    
T  35811927 ttttgagtgaaaaatgtcaaaactcctgagagcaccctttttcagttcgccgtggcgagt 35811986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 214
Target Start/End: Complemental strand, 46643272 - 46643210
Alignment:
Q  153 gaaaaatgtcaaa-ctcccgagagcaccttgtttcagttcgccatggcgagttgtgagttcgc 214  Q
    ||||||||||||| |||||||||||||| | |  ||||||||||||||||||||||| |||||    
T  46643272 gaaaaatgtcaaaactcccgagagcaccctttcccagttcgccatggcgagttgtgaattcgc 46643210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 15120602 - 15120651
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    |||||||||| ||||||||||  ||||||||||||| |||||||||||||    
T  15120602 tgtaacgcccactttttattaattaattatttaatcaagtctagacgagt 15120651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 12774487 - 12774387
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||| ||| |||||||  || |||||| | |||| ||||| ||||||||||||||||| | |||||||||||  ||| ||  ||| |||||||||||||    
T  12774487 gatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattagaaaagattggagaatgagattgaacct 12774388  T
Q  125 g 125  Q
    |    
T  12774387 g 12774387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 125
Target Start/End: Complemental strand, 16597110 - 16597034
Alignment:
Q  49 ttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    |||||| |||| || || ||||||||||||||||| | |||||||||||| |||  | |||| ||||||||||||||    
T  16597110 ttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 16597034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 179
Target Start/End: Complemental strand, 40907575 - 40907463
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaac 166  Q
    ||||| ||| || |||||| | |||||||||||||||||||||||||| |||| |  |    |||||||||   ||| ||||| ||||||||||||||      
T  40907575 tgagtaccttaatatgtataagaatgattaggcaagtttttagattgaaattggatgtacagaagtttaaaatgggatttttgggtgaaaaatgtcaagt 40907476  T
Q  167 tcccgagagcacc 179  Q
    |||||||||||||    
T  40907475 tcccgagagcacc 40907463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 97
Target Start/End: Complemental strand, 13845031 - 13844956
Alignment:
Q  22 catgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattag 97  Q
    |||||||| ||| |||||||  ||||||||||| |||| ||||| |||||| |||||||||| | || ||||||||    
T  13845031 catgatttcgtaattttgacttttaagttgaaccttagatgtttttgagtgtctgaacatgtctaattatgattag 13844956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 16043561 - 16043426
Alignment:
Q  42 ccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatg 141  Q
    |||| ||| ||||||||| || || ||||||||| || |||||| | |||||||||  ||  ||||||||||| ||||||| |  | ||||| |||   |    
T  16043561 cctttagtcgaactttagatgattttgagtgcctcaatatgtataagaatgattagaaaaaattttagattgaaattgaacatagggaagttaaaaatgg 16043462  T
Q  142 gaattttgagtgaaaaatgtcaaactcccgagagca 177  Q
    || ||||| ||||||||||||||  |||||||||||    
T  16043461 gatttttgggtgaaaaatgtcaagttcccgagagca 16043426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 8846833 - 8846764
Alignment:
Q  56 ttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    |||| ||||| ||||| ||||||||||| | |||||||||||| ||| ||  ||| ||||||||||||||    
T  8846833 ttagatgtttttgagtacctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctg 8846764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 23844771 - 23844722
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    |||||||||| ||||| ||||  |||||||||||| ||||||||||||||    
T  23844771 tgtaacgcccacttttaattaattaattatttaattgagtctagacgagt 23844722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 120
Target Start/End: Complemental strand, 28383291 - 28383218
Alignment:
Q  47 agttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattga 120  Q
    |||| ||| |||| ||||| |||| |||||||||||||   ||||||||||||||  ||||||| |||||||||    
T  28383291 agtttaaccttaggtgtttatgagggcctgaacatgtaccttaatgattaggcaaagttttagaatgagattga 28383218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 41792124 - 41792063
Alignment:
Q  61 tgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    ||||| |||| |||||||||||||   ||||||||||||||  ||||||| |||||||||||    
T  41792124 tgtttatgagggcctgaacatgtaccttaatgattaggcaaagttttagaatgagattgaac 41792063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 7089355 - 7089255
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||| ||| |||||||  || |||||||| |||| ||  | ||||||||||||||||| | |||||||||||| |||  | |||  |||||||||||||    
T  7089355 gatttcgtaattttgacttttgagttgaaccttagatgcctatgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 7089256  T
Q  125 g 125  Q
    |    
T  7089255 g 7089255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 12903234 - 12903135
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||| ||| |||||||  || |||||||| |||| || || ||||||||||||||||| | |||||||||||| |||  | |||  |||||||||||||    
T  12903234 gatttcgtaattttgacttttgagttgaaccttagatgctt-tgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 12903136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 123
Target Start/End: Original strand, 15279759 - 15279815
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacc 123  Q
    |||| |||||||||||||   ||||||||||||||  ||||||| ||||||||||||    
T  15279759 tgagggcctgaacatgtaccttaatgattaggcaaagttttagaatgagattgaacc 15279815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 263
Target Start/End: Original strand, 16486882 - 16486930
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctagacgag 263  Q
    |||||||||| |||||  |||  ||||||||||||||||||||||||||    
T  16486882 tgtaacgcccacttttatttaattaattatttaatcgagtctagacgag 16486930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 177
Target Start/End: Original strand, 32466748 - 32466780
Alignment:
Q  145 ttttgagtgaaaaatgtcaaactcccgagagca 177  Q
    ||||||||||||||||||||| |||||||||||    
T  32466748 ttttgagtgaaaaatgtcaaattcccgagagca 32466780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 125
Target Start/End: Original strand, 44928591 - 44928655
Alignment:
Q  61 tgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    ||||| ||||||||||||||| | | |||||||||||| |||  | |||| ||||||||||||||    
T  44928591 tgtttttgagtgcctgaacatatctaataatgattaggaaagaatgtagaatgagattgaacctg 44928655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 177
Target Start/End: Complemental strand, 51993135 - 51993103
Alignment:
Q  145 ttttgagtgaaaaatgtcaaactcccgagagca 177  Q
    ||||||||||||||||||||||||| |||||||    
T  51993135 ttttgagtgaaaaatgtcaaactcctgagagca 51993103  T

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Target: chr6 (Bit Score: 117; Significance: 1e-59; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 15 - 179
Target Start/End: Complemental strand, 20109714 - 20109550
Alignment:
Q  15 gagtgaacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattga 114  Q
    |||| ||||||||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  20109714 gagtcaacatgattttgtagttttgatccttaagttgaactttagatgattctgagtgcctgaacatgtataataatgattaggcaagtttttagattga 20109615  T
Q  115 gattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
    ||||||||||  ||||||||||| ||||| | ||| ||||||||||||||| |||||||||||||    
T  20109614 gattgaacctaggaaagtttaaaaatggattattgggtgaaaaatgtcaaattcccgagagcacc 20109550  T

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Target: chr6; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 15 - 179
Target Start/End: Complemental strand, 19023949 - 19023784
Alignment:
Q  15 gagtgaacatgatttt-gtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattg 113  Q
    |||| ||||||||||| |||||||||| |||||||||||| ||||| || ||  | ||||||||| |||||| |||||||||||||||||||||||||||    
T  19023949 gagtcaacatgatttttgtagttttgaaccttaagttgaattttagatgatttcgggtgcctgaatatgtataataatgattaggcaagtttttagattg 19023850  T
Q  114 agattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||  |||||||||||||    
T  19023849 agattgaacctgagaaagtttaaaaatggatttttgagtgaaaaatgtcaagttcccgagagcacc 19023784  T

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Target: chr6; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 15 - 179
Target Start/End: Original strand, 9098071 - 9098235
Alignment:
Q  15 gagtgaacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattga 114  Q
    |||| |||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||||  ||| ||||||||||| ||||||| ||||||||    
T  9098071 gagtcaacatgattttgtagttttgacccttaagtcgaactttagatgattctgagtgcctgaacagatataataatgattagacaagtttctagattga 9098170  T
Q  115 gattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
     |||||||||| ||||||||||| ||||| |||||  |||||||| ||||| |||||||||||||    
T  9098171 tattgaacctgggaaagtttaaaaatggatttttggatgaaaaatatcaaattcccgagagcacc 9098235  T

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Target: chr6; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 11 - 125
Target Start/End: Complemental strand, 23019910 - 23019796
Alignment:
Q  11 cagagagtgaacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttaga 110  Q
    |||||||| |||||||||| |||||||||||||||||||||||| |||| || || ||||||||||||||||| |||||||||||||| ||| |||||||    
T  23019910 cagagagtcaacatgatttcgtagttttgacccttaagttgaaccttagatgcttttgagtgcctgaacatgtgtgataatgattaggaaagattttaga 23019811  T
Q  111 ttgagattgaacctg 125  Q
    |||||||||||||||    
T  23019810 ttgagattgaacctg 23019796  T

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Target: chr6; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 44 - 202
Target Start/End: Complemental strand, 19668918 - 19668759
Alignment:
Q  44 ttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatgga 143  Q
    |||||| |||| |||| |||||||||||| |||||||||||| ||||||||||| |||||||||| |||||||||||||||| | ||||||||| ||| |    
T  19668918 ttaagtcgaaccttagatgtttctgagtgtctgaacatgtatcataatgattagacaagtttttatattgagattgaacctggggaagtttaaaaatgaa 19668819  T
Q  144 attttgagtgaaaaatgtcaaactcccgagagcaccttgtttc-agttcgccatggcgag 202  Q
     |||||  |||||||||||||| |||| ||||||||| |||||  |||||||| ||||||    
T  19668818 tttttggatgaaaaatgtcaaattcccaagagcacctagtttcttgttcgccaaggcgag 19668759  T

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Target: chr6; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 54 - 179
Target Start/End: Complemental strand, 19362960 - 19362835
Alignment:
Q  54 ctttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtg 153  Q
    |||||| ||||| |||||||  ||| |||||| ||||||||||| ||||||||||||||||||||||||  ||||||||||||| ||||| ||||| |||    
T  19362960 ctttagatgtttttgagtgctggaatatgtattataatgattagacaagtttttagattgagattgaacacgagaaagtttaaaaatggatttttgggtg 19362861  T
Q  154 aaaaatgtcaaactcccgagagcacc 179  Q
    |||||||||||| || ||||||||||    
T  19362860 aaaaatgtcaaattctcgagagcacc 19362835  T

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Target: chr6; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 52 - 179
Target Start/End: Complemental strand, 20224482 - 20224355
Alignment:
Q  52 aactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgag 151  Q
    |||||||| || || |||||||||||||||| || | |||||||||||||||||||||||||||||||||| || ||||||| |||   ||| ||||| |    
T  20224482 aactttagatgattttgagtgcctgaacatgcataagaatgattaggcaagtttttagattgagattgaacatgggaaagttaaaaatgggatttttggg 20224383  T
Q  152 tgaaaaatgtcaaactcccgagagcacc 179  Q
    |||||||||||||  |||||||||||||    
T  20224382 tgaaaaatgtcaagttcccgagagcacc 20224355  T

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Target: chr6; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 52 - 179
Target Start/End: Complemental strand, 22118466 - 22118339
Alignment:
Q  52 aactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgag 151  Q
    |||||||| || || |||||||||||||||| || | |||||||||||||||||||||||||||||||||| || ||||||| |||   ||| ||||| |    
T  22118466 aactttagatgattttgagtgcctgaacatgcataagaatgattaggcaagtttttagattgagattgaacatgggaaagttaaaaatgggatttttggg 22118367  T
Q  152 tgaaaaatgtcaaactcccgagagcacc 179  Q
    |||||||||||||  |||||||||||||    
T  22118366 tgaaaaatgtcaagttcccgagagcacc 22118339  T

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Target: chr6; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 42 - 179
Target Start/End: Complemental strand, 18697036 - 18696898
Alignment:
Q  42 ccttaagttgaactttagttg-tttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagat 140  Q
    |||||||||||||||||| || ||| |||||||||||| |||||| ||||||||||||||||||||||||||||||| |||| |||| ||||| |||       
T  18697036 ccttaagttgaactttagatgatttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagatggaacatgaggaagttaaaaatg 18696937  T
Q  141 ggaattttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
    ||| ||||  || |||||||||||  |||||||||||||    
T  18696936 ggattttttggttaaaaatgtcaagttcccgagagcacc 18696898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 42 - 203
Target Start/End: Complemental strand, 33443593 - 33443431
Alignment:
Q  42 ccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatg 141  Q
    |||||||| ||||||||| || || |||||||||||| |||||  |||||||||||||||| ||||||||||||||| |||   |||||||||||| ||     
T  33443593 ccttaagtcgaactttagatgattttgagtgcctgaatatgtacaataatgattaggcaagattttagattgagattaaacacaagaaagtttaaaaata 33443494  T
Q  142 gaattttgagtgaaaaatgtcaaactcccgagagcaccttgtttc-agttcgccatggcgagt 203  Q
     | ||||| ||||||||| ||||| |||||||||||||  |||||  |||||||| |||||||    
T  33443493 aatttttgggtgaaaaatatcaaattcccgagagcacccagtttcttgttcgccaaggcgagt 33443431  T

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Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 179
Target Start/End: Complemental strand, 35008718 - 35008561
Alignment:
Q  22 catgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaa 121  Q
    ||||||||||||  ||||| ||||  || || |||||| ||||| | ||||||||||||||||| | |||||||||||||||||||||| ||||||||||    
T  35008718 catgattttgtaaatttgatcctttggtcgagctttagatgtttttaagtgcctgaacatgtataagaatgattaggcaagtttttagactgagattgaa 35008619  T
Q  122 cctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
    |    ||||||| |||   ||| ||||||||||||||||||||  ||| |||||||||    
T  35008618 cacatgaaagttaaaaatgggatttttgagtgaaaaatgtcaagttcctgagagcacc 35008561  T

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Target: chr6; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 23527699 - 23527836
Alignment:
Q  42 ccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatg 141  Q
    |||| ||| ||||||||| || || |||||||||| | |||||| | |||||||||||||||||||||||||| ||||||| |  ||||||| |||   |    
T  23527699 cctttagtcgaactttagatggttttgagtgcctggatatgtataagaatgattaggcaagtttttagattgaaattgaacataggaaagttaaaaatgg 23527798  T
Q  142 gaattttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
    || ||||| ||||||||||||||  |||||||||||||    
T  23527799 gatttttgggtgaaaaatgtcaagttcccgagagcacc 23527836  T

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Target: chr6; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 25644814 - 25644687
Alignment:
Q  22 catgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaa 121  Q
    |||||||| ||| |||||||| ||||||||||| |||| ||||| ||||||||||  ||||||| |   |||||||| ||| ||||||||||||||||||    
T  25644814 catgatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgcctgttcatgtataacgttgattaggaaagattttagattgagattgaa 25644715  T
Q  122 cctgagaaagtttaaagatggaattttg 149  Q
    ||||| | |||||||  ||||| |||||    
T  25644714 cctgaaatagtttaagaatggatttttg 25644687  T

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Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 202
Target Start/End: Original strand, 17229537 - 17229670
Alignment:
Q  70 gtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactcc 169  Q
    |||||||||||||||| | |||||||||||||||||||||||||| ||||||| |  | ||||| |||   ||| ||||| ||||||||||||||  |||    
T  17229537 gtgcctgaacatgtataagaatgattaggcaagtttttagattgaaattgaacatagggaagttaaaaatgggatttttgggtgaaaaatgtcaagttcc 17229636  T
Q  170 cgagagcaccttgtttc-agttcgccatggcgag 202  Q
    | ||||||||| ||||| || |||||| ||||||    
T  17229637 caagagcacctagtttctagctcgccaaggcgag 17229670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 122
Target Start/End: Complemental strand, 18706787 - 18706706
Alignment:
Q  42 ccttaagttgaactttagttg-tttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    |||||||||||||||||| || ||| |||||| ||||| |||||| ||||||||||||||||||||||||||||||| ||||    
T  18706787 ccttaagttgaactttagatgatttttgagtgtctgaatatgtataataatgattaggcaagtttttagattgagatggaac 18706706  T

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Target: chr6; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 54 - 179
Target Start/End: Original strand, 18895920 - 18896046
Alignment:
Q  54 ctttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgaga-ttgaacctgagaaagtttaaagatggaattttgagt 152  Q
    |||||| ||||| |||||||  ||| |||||| ||||||||||| |||||||||||||||| | |||||| || |||||||  ||   ||| ||||| ||    
T  18895920 ctttagatgtttttgagtgctggaatatgtattataatgattagacaagtttttagattgaaatttgaacatgggaaagttataaatgggatttttgggt 18896019  T
Q  153 gaaaaatgtcaaactcccgagagcacc 179  Q
    ||||||||||||| |||||||||||||    
T  18896020 gaaaaatgtcaaattcccgagagcacc 18896046  T

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Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 178
Target Start/End: Complemental strand, 17106248 - 17106124
Alignment:
Q  54 ctttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtg 153  Q
    |||||| || || |||||||||||| |||||| | |||||||||||||||||||||| |||||||||||    | ||||| |||   ||| ||||| |||    
T  17106248 ctttagatgattttgagtgcctgaatatgtataagaatgattaggcaagtttttagactgagattgaacacagggaagttaaaaatgggatttttgggtg 17106149  T
Q  154 aaaaatgtcaaactcccgagagcac 178  Q
    |||||||||||  ||||||||||||    
T  17106148 aaaaatgtcaagttcccgagagcac 17106124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 125
Target Start/End: Original strand, 27332913 - 27333016
Alignment:
Q  22 catgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaa 121  Q
    ||||||||  || |||||||| ||||||||||| |||| || || |||||| |||||||||||| || ||||||||| ||| ||||||| |||| |||||    
T  27332913 catgatttcataattttgacctttaagttgaaccttagatgcttttgagtggctgaacatgtataatgatgattaggaaagattttagaatgaggttgaa 27333012  T
Q  122 cctg 125  Q
    ||||    
T  27333013 cctg 27333016  T

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Target: chr6; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 125
Target Start/End: Original strand, 27393653 - 27393756
Alignment:
Q  22 catgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaa 121  Q
    ||||||||  || |||||||| ||||||||||| |||| || || |||||| |||||||||||| || ||||||||| ||| ||||||| |||| |||||    
T  27393653 catgatttcataattttgacctttaagttgaaccttagatgcttttgagtggctgaacatgtataatgatgattaggaaagattttagaatgaggttgaa 27393752  T
Q  122 cctg 125  Q
    ||||    
T  27393753 cctg 27393756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 67 - 179
Target Start/End: Complemental strand, 18453706 - 18453594
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatg-gaattttgagtgaaaaatgtcaaa 165  Q
    ||||||||| ||||| ||| | |||||||||||||||||||||||||| ||||||| || | ||| ||||| ||| || ||||| ||||||||||||||     
T  18453706 tgagtgccttaacatatataagaatgattaggcaagtttttagattgaaattgaacatggggaag-ttaaaaatgagatttttgggtgaaaaatgtcaag 18453608  T
Q  166 ctcccgagagcacc 179  Q
     |||||| ||||||    
T  18453607 ttcccgatagcacc 18453594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 21 - 177
Target Start/End: Complemental strand, 23077300 - 23077145
Alignment:
Q  21 acatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattga 120  Q
    |||| ||||||||  ||||| |||| ||| || |||||| ||||| ||| | ||||||||||||| | |||||||| ||||||||||||| |||||||||    
T  23077300 acataattttgtaaatttgatcctttagtcgagctttagatgttt-tgacttcctgaacatgtataagaatgattatgcaagtttttagactgagattga 23077202  T
Q  121 acctgagaaagtttaaagatggaa-ttttgagtgaaaaatgtcaaactcccgagagca 177  Q
    || |  | ||| ||||| |||||| |||||||||||| |||||||  | |||||||||    
T  23077201 acatagggaag-ttaaaaatggaatttttgagtgaaatatgtcaagtttccgagagca 23077145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 37 - 122
Target Start/End: Complemental strand, 23539471 - 23539386
Alignment:
Q  37 ttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    |||| |||| ||| ||||||||| || || |||||||||||| |||||| | |||| ||||||||||||||||| |||||||||||    
T  23539471 ttgatcctttagtcgaactttagatggttttgagtgcctgaatatgtataagaatggttaggcaagtttttagactgagattgaac 23539386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 178
Target Start/End: Complemental strand, 20137162 - 20137061
Alignment:
Q  77 aacatgtatgataatgattaggcaagtttttagattgagattgaacctgaga-aagtttaaagatggaattttgagtgaaaaatgtcaaactcccgagag 175  Q
    ||||||||| | |||||||||||||||||||||||||| |||||| | |||| ||||| |||   ||| ||||| ||||||||||||||  ||| |||||    
T  20137162 aacatgtataagaatgattaggcaagtttttagattgaaattgaa-cagagataagttaaaaatgggatttttgggtgaaaaatgtcaagttccagagag 20137064  T
Q  176 cac 178  Q
    |||    
T  20137063 cac 20137061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 178
Target Start/End: Original strand, 22195707 - 22195808
Alignment:
Q  77 aacatgtatgataatgattaggcaagtttttagattgagattgaacctgaga-aagtttaaagatggaattttgagtgaaaaatgtcaaactcccgagag 175  Q
    ||||||||| | |||||||||||||||||||||||||| |||||| | |||| ||||| |||   ||| ||||| ||||||||||||||  ||| |||||    
T  22195707 aacatgtataagaatgattaggcaagtttttagattgaaattgaa-cagagataagttaaaaatgggatttttgggtgaaaaatgtcaagttccagagag 22195805  T
Q  176 cac 178  Q
    |||    
T  22195806 cac 22195808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 1561792 - 1561692
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||| ||| |||||||  || |||||||| |||| || || ||||||||||||||||| | |||||||||||| |||    |||| |||||||||||||    
T  1561792 gatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaagtagaatgagattgaacct 1561693  T
Q  125 g 125  Q
    |    
T  1561692 g 1561692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 125
Target Start/End: Complemental strand, 19652648 - 19652584
Alignment:
Q  61 tgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    ||||| ||||||||||||||||| | |||||||||||| ||| ||  ||| ||||||||||||||    
T  19652648 tgtttttgagtgcctgaacatgtctaataatgattaggaaagattgaagaatgagattgaacctg 19652584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 20637926 - 20638026
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||| ||| |||||||  || |||||||| |||| || || ||||||||||||||||| | |||||||||||| |||  | |||  |||||||||||||    
T  20637926 gatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 20638025  T
Q  125 g 125  Q
    |    
T  20638026 g 20638026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 177
Target Start/End: Original strand, 24550720 - 24550752
Alignment:
Q  145 ttttgagtgaaaaatgtcaaactcccgagagca 177  Q
    |||||||||||||||||||||||||||||||||    
T  24550720 ttttgagtgaaaaatgtcaaactcccgagagca 24550752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 176
Target Start/End: Original strand, 6083226 - 6083257
Alignment:
Q  145 ttttgagtgaaaaatgtcaaactcccgagagc 176  Q
    ||||||||||||||||||||||||||||||||    
T  6083226 ttttgagtgaaaaatgtcaaactcccgagagc 6083257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 126
Target Start/End: Original strand, 19303215 - 19303274
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctga 126  Q
    ||||||||||||||||| | |||||||||||| |||  | |||| |||||||||||||||    
T  19303215 tgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctga 19303274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 176
Target Start/End: Original strand, 31732437 - 31732468
Alignment:
Q  145 ttttgagtgaaaaatgtcaaactcccgagagc 176  Q
    ||||||||||||||||||||||||||||||||    
T  31732437 ttttgagtgaaaaatgtcaaactcccgagagc 31732468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 16830238 - 16830188
Alignment:
Q  72 gcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    |||||||||||||  |||||||||||||||  ||||||| |||||||||||    
T  16830238 gcctgaacatgtaccataatgattaggcaaagttttagaatgagattgaac 16830188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 125
Target Start/End: Complemental strand, 18457161 - 18457103
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    ||||||||||||||||| | |||||||||||| |||  | |||| ||||||||||||||    
T  18457161 tgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctg 18457103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 125
Target Start/End: Original strand, 20360625 - 20360703
Alignment:
Q  47 agttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    |||||| | |||| ||||| ||||||||||||||||| | |||||||||||| |||  | |||  ||||||||||||||    
T  20360625 agttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 20360703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 125
Target Start/End: Original strand, 22080391 - 22080469
Alignment:
Q  47 agttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    |||||||| |||| ||||| |||||| |||||||||| | |||||||||||  ||| ||  ||||| ||||||||||||    
T  22080391 agttgaaccttagatgtttttgagtgactgaacatgtctaataatgattagaaaagattagagattaagattgaacctg 22080469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 15685769 - 15685830
Alignment:
Q  61 tgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    ||||| |||| |||||||||||||   ||||||||||||| | ||||||| |||||||||||    
T  15685769 tgtttgtgagggcctgaacatgtaccttaatgattaggcatgattttagaatgagattgaac 15685830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 121
Target Start/End: Complemental strand, 16813218 - 16813169
Alignment:
Q  72 gcctgaacatgtatgataatgattaggcaagtttttagattgagattgaa 121  Q
    |||||||||||||  |||||||||||||||  ||||||| ||||||||||    
T  16813218 gcctgaacatgtaccataatgattaggcaaagttttagaatgagattgaa 16813169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 19864283 - 19864234
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    |||||||||| ||||| ||||  |||||||||||| ||||||||||||||    
T  19864283 tgtaacgcccacttttaattatttaattatttaattgagtctagacgagt 19864234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 21732012 - 21732061
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    |||||||||| |||||  |||  |||||||||||||||||||||||||||    
T  21732012 tgtaacgcccacttttatttaattaattatttaatcgagtctagacgagt 21732061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 21833693 - 21833742
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    |||||||||| |||||  |||  |||||||||||||||||||||||||||    
T  21833693 tgtaacgcccacttttatttaattaattatttaatcgagtctagacgagt 21833742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 22404891 - 22404940
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    |||||||||| ||||||||||  |||||||||||| ||||||||| ||||    
T  22404891 tgtaacgcccactttttattagttaattatttaattgagtctagatgagt 22404940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 25641025 - 25641074
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    |||||||||| ||||| ||||  |||||||||||| ||||||||||||||    
T  25641025 tgtaacgcccacttttaattaattaattatttaattgagtctagacgagt 25641074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 29493206 - 29493145
Alignment:
Q  61 tgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    ||||| |||| |||||||||||||   ||||||||||||||  ||||||| |||||||||||    
T  29493206 tgtttatgagggcctgaacatgtaccttaatgattaggcaaagttttagaatgagattgaac 29493145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 262
Target Start/End: Original strand, 20906841 - 20906889
Alignment:
Q  214 ctgtaacgcccgctttttattacgtaattatttaatcgagtctagacga 262  Q
    ||||||||||| ||||| ||||  ||||||||||||||||| |||||||    
T  20906841 ctgtaacgcccacttttaattaattaattatttaatcgagtttagacga 20906889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 22432738 - 22432678
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtat 85  Q
    |||||||||||||||||  || |||||||| |||| ||||| ||||||| |||| ||||||    
T  22432738 gattttgtagttttgacttttgagttgaaccttagatgtttttgagtgcatgaagatgtat 22432678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 22439288 - 22439228
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtat 85  Q
    ||||||||| |||||||  || |||||||| |||| ||||| |||||||||||| ||||||    
T  22439288 gattttgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgtat 22439228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 25641816 - 25641876
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtat 85  Q
    ||||||||||||| |||  || |||||||| |||| ||||| |||||||||||| ||||||    
T  25641816 gattttgtagtttggacttttgagttgaaccttagatgtttttgagtgcctgaagatgtat 25641876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 5e-59; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 15 - 205
Target Start/End: Complemental strand, 20499159 - 20498968
Alignment:
Q  15 gagtgaacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattga 114  Q
    |||| |||||||||||||||||||||||||| ||||||||||||| || || ||||||||||||||||||| |||||||||||| |||||||||||||||    
T  20499159 gagtcaacatgattttgtagttttgacccttgagttgaactttagatgattttgagtgcctgaacatgtataataatgattaggtaagtttttagattga 20499060  T
Q  115 gattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactcccgagagcaccttgtttc-agttcgccatggcgagttg 205  Q
    ||||||||||||||||||||||| ||||| |||||  |||||||||||||| ||| |||||||||  |||||  |||||||| |||||||||    
T  20499059 gattgaacctgagaaagtttaaaaatggatttttggatgaaaaatgtcaaattcctgagagcacccagtttctggttcgccaaggcgagttg 20498968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 17266565 - 17266702
Alignment:
Q  42 ccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatg 141  Q
    |||||||| ||||||||| ||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||| |||    
T  17266565 ccttaagtcgaactttagatgtttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctacgaaagtttaaaaatg 17266664  T
Q  142 gaattttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
    || ||||| ||||||||||||||| |||||||||||||    
T  17266665 gatttttgggtgaaaaatgtcaaattcccgagagcacc 17266702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 15 - 179
Target Start/End: Original strand, 982949 - 983112
Alignment:
Q  15 gagtgaacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattga 114  Q
    |||| ||||||||| ||||||||||||| |||||||||||||||| || || |||||| ||||||||||||  || |||||||| |||||||||||||||    
T  982949 gagtcaacatgattatgtagttttgacc-ttaagttgaactttagatgattttgagtgtctgaacatgtatattagtgattaggaaagtttttagattga 983047  T
Q  115 gattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
    ||||||||||||||||||||||| ||||| ||||| ||||||||| ||||| |||| ||||||||    
T  983048 gattgaacctgagaaagtttaaaaatggatttttgggtgaaaaatatcaaattccctagagcacc 983112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 37 - 179
Target Start/End: Original strand, 13507653 - 13507795
Alignment:
Q  37 ttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaa 136  Q
    |||||||||||||||||| |||| || || |||||||||||| |||||| ||||||||||| |||||||||||||||||| |||||||| ||||||||||    
T  13507653 ttgacccttaagttgaaccttagatgattttgagtgcctgaatatgtataataatgattagacaagtttttagattgagactgaacctgggaaagtttaa 13507752  T
Q  137 agatggaattttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
    | ||||| ||||||||||||||||||||  |||||||||||||    
T  13507753 aaatggatttttgagtgaaaaatgtcaagttcccgagagcacc 13507795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 37 - 179
Target Start/End: Original strand, 13597185 - 13597327
Alignment:
Q  37 ttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaa 136  Q
    |||||||||||||||||| |||| || || |||||||||||| |||||| ||||||||||| |||||||||||||||||| |||||||| ||||||||||    
T  13597185 ttgacccttaagttgaaccttagatgattttgagtgcctgaatatgtataataatgattagacaagtttttagattgagactgaacctgggaaagtttaa 13597284  T
Q  137 agatggaattttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
    | ||||| ||||||||||||||||||||  |||||||||||||    
T  13597285 aaatggatttttgagtgaaaaatgtcaagttcccgagagcacc 13597327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 44 - 177
Target Start/End: Complemental strand, 37116894 - 37116761
Alignment:
Q  44 ttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatgga 143  Q
    |||||| || |||||| || || |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  37116894 ttaagtcgagctttagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctgagaaagtataaaaatgga 37116795  T
Q  144 attttgagtgaaaaatgtcaaactcccgagagca 177  Q
     ||||| ||||||||||||||| |||||||||||    
T  37116794 tttttgggtgaaaaatgtcaaattcccgagagca 37116761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 44 - 203
Target Start/End: Complemental strand, 24353570 - 24353410
Alignment:
Q  44 ttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatgga 143  Q
    |||||| ||||||||| |  || |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||    
T  24353570 ttaagtcgaactttagataattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttataaatgga 24353471  T
Q  144 attttgagtgaaaaatgtcaaactcccgagagcaccttgtttc-agttcgccatggcgagt 203  Q
     ||||| ||||||| ||||||| |||||||||||||  |||||  |||||||| |||||||    
T  24353470 tttttgggtgaaaattgtcaaattcccgagagcacccagtttcttgttcgccaaggcgagt 24353410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 44 - 179
Target Start/End: Original strand, 17439080 - 17439215
Alignment:
Q  44 ttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatgga 143  Q
    |||||| || |||||| || || |||||||||||| |||||  ||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||    
T  17439080 ttaagtcgagctttagatgattttgagtgcctgaatatgtacaataatgattaggcaagtttttagattgggattgaacctgggaaagtttaaaaatgga 17439179  T
Q  144 attttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
     ||||| ||||||||||||||| |||||||||||||    
T  17439180 tttttgggtgaaaaatgtcaaattcccgagagcacc 17439215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 22 - 179
Target Start/End: Complemental strand, 16800057 - 16799900
Alignment:
Q  22 catgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaa 121  Q
    ||||||||||| | ||| |||||||||| || |||||| ||||| |||||||||||| |||||| | |||||||||||| ||||||||||||||||||||    
T  16800057 catgattttgt-gatttaacccttaagtcgagctttagatgtttttgagtgcctgaatatgtataagaatgattaggcaggtttttagattgagattgaa 16799959  T
Q  122 cctgagaaag-tttaaagatggaattttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
    | || ||||| |||||| ||||| ||||| ||||||||||||||| |||||||||||||    
T  16799958 catgggaaagttttaaaaatggatttttgggtgaaaaatgtcaaattcccgagagcacc 16799900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 42 - 178
Target Start/End: Complemental strand, 22365211 - 22365074
Alignment:
Q  42 ccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagttta-aagat 140  Q
    |||||||| ||||||||| || || |||||||||  | |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| || ||    
T  22365211 ccttaagtcgaactttagatgattttgagtgcctagatatgtataataatgattaggcaagtttttagattgagtttgaacctgagaaagtttagaaaat 22365112  T
Q  141 ggaattttgagtgaaaaatgtcaaactcccgagagcac 178  Q
    ||| ||||| ||||||||||||||| ||||||||||||    
T  22365111 ggatttttgggtgaaaaatgtcaaattcccgagagcac 22365074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 44 - 179
Target Start/End: Original strand, 37116075 - 37116211
Alignment:
Q  44 ttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgatt-aggcaagtttttagattgagattgaacctgagaaagtttaaagatgg 142  Q
    |||||| || |||||| || || |||||||||||| |||||| ||||||||| |||||| ||||||||||||||||||||||||||||| ||||| ||||    
T  37116075 ttaagtcgagctttagatgattttgagtgcctgaatatgtataataatgatttaggcaaatttttagattgagattgaacctgagaaagattaaaaatgg 37116174  T
Q  143 aattttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
    | ||||| ||||||||| ||||| |||||||||||||    
T  37116175 atttttgggtgaaaaatctcaaattcccgagagcacc 37116211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 42 - 195
Target Start/End: Complemental strand, 22996393 - 22996240
Alignment:
Q  42 ccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatg 141  Q
    |||||||| || |||||| || || |||||||||||| |||||| | |||||||||||||||||||||||||||||||||| || ||||||| |||   |    
T  22996393 ccttaagtcgagctttagatgattttgagtgcctgaatatgtataagaatgattaggcaagtttttagattgagattgaacatgggaaagttaaaaatgg 22996294  T
Q  142 gaattttgagtgaaaaatgtcaaactcccgagagcaccttgtttcagttcgcca 195  Q
    || ||||| ||||||||||||||  |||||||||||||  |||| |||||||||    
T  22996293 gatttttgggtgaaaaatgtcaagttcccgagagcacccagttttagttcgcca 22996240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 44 - 179
Target Start/End: Original strand, 40492426 - 40492562
Alignment:
Q  44 ttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatg-g 142  Q
    |||||| || |||||| || || |||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||  ||||||||||| ||| |    
T  40492426 ttaagtcgagctttagatgattttgagtgcctgaatatgtataagaatgattaggcaagtttttagattgagattgaacctcggaaagtttaaaaatgag 40492525  T
Q  143 aattttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
    | ||||| ||||||||||||||  |||||||||||||    
T  40492526 atttttgggtgaaaaatgtcaagttcccgagagcacc 40492562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 39834324 - 39834221
Alignment:
Q  22 catgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaa 121  Q
    ||||||||||||||||||||| |||||| |||| |||| ||||| ||||||||| ||| |||||||||||||||||| ||| || |||||||||||||||    
T  39834324 catgattttgtagttttgacctttaagtcgaaccttagatgtttttgagtgcctaaacttgtatgataatgattaggaaagattgtagattgagattgaa 39834225  T
Q  122 cctg 125  Q
    ||||    
T  39834224 cctg 39834221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 44 - 179
Target Start/End: Original strand, 20532981 - 20533118
Alignment:
Q  44 ttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatgga 143  Q
    ||||||||| |||||| || || |||||| |||||  ||||  ||||||||||||||| |||||||||||||||||||| || ||||||||||| |||||    
T  20532981 ttaagttgagctttagatgattttgagtgtctgaatgtgtacaataatgattaggcaaatttttagattgagattgaacttgggaaagtttaaaaatgga 20533080  T
Q  144 --attttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
       ||||| ||||||||||||||| |||||||||||||    
T  20533081 tttttttgggtgaaaaatgtcaaattcccgagagcacc 20533118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 67 - 203
Target Start/End: Complemental strand, 22526019 - 22525882
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagat-ggaattttgagtgaaaaatgtcaaa 165  Q
    |||||| ||||| |||||| | |||||||||||||||| ||||||||| |||||||||| ||||||||||| || ||| ||||| ||||||||||||||     
T  22526019 tgagtgtctgaatatgtataagaatgattaggcaagttgttagattgaaattgaacctgggaaagtttaaaaatgggatttttgggtgaaaaatgtcaag 22525920  T
Q  166 ctcccgagagcaccttgtttcagttcgccatggcgagt 203  Q
     |||||||||||||   ||| ||||||||| |||||||    
T  22525919 ttcccgagagcacccaattttagttcgccaaggcgagt 22525882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 2418448 - 2418585
Alignment:
Q  42 ccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatg 141  Q
    |||| ||| ||||||||| || || |||||||||||| |||||| | |||||||||||||||||||||||||| |||||||||| ||||| ||||| |||    
T  2418448 cctttagtcgaactttagatggttttgagtgcctgaatatgtataagaatgattaggcaagtttttagattgaaattgaacctgggaaag-ttaaaaatg 2418546  T
Q  142 -gaattttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
      | ||||| ||||||||||||||| | |||||||||||    
T  2418547 atatttttgggtgaaaaatgtcaaatttccgagagcacc 2418585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 42 - 195
Target Start/End: Original strand, 20501674 - 20501827
Alignment:
Q  42 ccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatg 141  Q
    |||| ||| ||||||||| || || || |||||||||||||||| | |||||||||||||||||||||||||| ||||||| || | || || |||   |    
T  20501674 cctttagtcgaactttagatggttttgggtgcctgaacatgtataagaatgattaggcaagtttttagattgaaattgaacatggggaaattaaaaacgg 20501773  T
Q  142 gaattttgagtgaaaaatgtcaaactcccgagagcaccttgtttcagttcgcca 195  Q
    || ||||| ||||||||||||||| ||| |||||||||  ||||| ||||||||    
T  20501774 gatttttgggtgaaaaatgtcaaattcctgagagcacccagtttctgttcgcca 20501827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 54 - 203
Target Start/End: Complemental strand, 23668323 - 23668175
Alignment:
Q  54 ctttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtg 153  Q
    |||||| || || ||||||| ||||||||||| | ||||||||||||||||||| |||||| |||||||||| | ||||| |||   ||| ||||| |||    
T  23668323 ctttagatgattttgagtgcatgaacatgtataaaaatgattaggcaagtttttggattgaaattgaacctg-ggaagttaaaaatgggatttttgggtg 23668225  T
Q  154 aaaaatgtcaaactcccgagagcaccttgtttcagttcgccatggcgagt 203  Q
    |||||||||||  |||||||||||||  |||| ||||||||| |||||||    
T  23668224 aaaaatgtcaagttcccgagagcacccagttttagttcgccaaggcgagt 23668175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 179
Target Start/End: Original strand, 14102778 - 14102934
Alignment:
Q  22 catgattttgtagttttgacccttaagttgaactttagttg-tttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattga 120  Q
    |||||||||||| ||| || |||||||| ||||| ||| || ||| |||||||||| | ||||||  ||||||||||||||||||| |||||||||||||    
T  14102778 catgattttgtaattt-gatccttaagtcgaactctagatgatttttgagtgcctggatatgtatattaatgattaggcaagtttt-agattgagattga 14102875  T
Q  121 acctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
    || |||| ||||| |||   ||| ||||| ||||||||||||||  |||||||||||||    
T  14102876 acatgaggaagttaaaaatgggatttttgggtgaaaaatgtcaagttcccgagagcacc 14102934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 145 - 214
Target Start/End: Complemental strand, 18760949 - 18760880
Alignment:
Q  145 ttttgagtgaaaaatgtcaaactcccgagagcaccttgtttcagttcgccatggcgagttgtgagttcgc 214  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| || |||||||    
T  18760949 ttttgagtgaaaaatgtcaaactcccgagagcaccctttttcagttcgccatggcgagtagttagttcgc 18760880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 202
Target Start/End: Original strand, 17085773 - 17085908
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatg-gaattttgagtgaaaaatgtcaaa 165  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||| | ||||||| || | ||| ||||| ||| || ||||| ||||||||||||||     
T  17085773 tgagtgcctgaacatgtataataatgattaggcaagtctttagattaaaattgaacatggggaag-ttaaaaatgagatttttgggtgaaaaatgtcaag 17085871  T
Q  166 ctcccgagagcaccttgtttcagttcgccatggcgag 202  Q
     | |||||||||||  ||||| |||||||| ||||||    
T  17085872 tttccgagagcacccagtttctgttcgccaaggcgag 17085908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 21286724 - 21286652
Alignment:
Q  11 cagagagtgaacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgt 83  Q
    |||||||| |||||||||| |||||||||||||||||||||||| |||| ||||| | |||||||||||||||    
T  21286724 cagagagtcaacatgatttcgtagttttgacccttaagttgaaccttagatgtttttaagtgcctgaacatgt 21286652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 70 - 201
Target Start/End: Original strand, 22963040 - 22963171
Alignment:
Q  70 gtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatg-gaattttgagtgaaaaatgtcaaactc 168  Q
    |||| ||||||||||| | ||||||||||||||| |||||||||| |||||||||| | | | ||||| ||| || ||||| ||||||||||||||  ||    
T  22963040 gtgcatgaacatgtataagaatgattaggcaagtctttagattgaaattgaacctggggatg-ttaaaaatgagatttttgggtgaaaaatgtcaagttc 22963138  T
Q  169 ccgagagcaccttgtttcagttcgccatggcga 201  Q
    |||||||||||  ||||| |||||||| |||||    
T  22963139 ccgagagcacccagtttctgttcgccaaggcga 22963171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 125
Target Start/End: Original strand, 38854880 - 38854983
Alignment:
Q  22 catgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaa 121  Q
    |||||||| ||| |||||||| ||||||||||| |||| ||||| ||||||||||||||||| | |||||||||||| ||| ||  ||||| ||||| ||    
T  38854880 catgatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattaagatttaa 38854979  T
Q  122 cctg 125  Q
    ||||    
T  38854980 cctg 38854983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 151
Target Start/End: Complemental strand, 6520860 - 6520731
Alignment:
Q  22 catgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaa 121  Q
    |||||||| ||| |||||||| ||||||||||| |||| ||||| |||||| |||||||||| | ||||| |||||| ||| ||  ||||| ||| ||||    
T  6520860 catgatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgtctgaacatgtctaataataattaggaaagattggagattaagactgaa 6520761  T
Q  122 cctgagaaagtttaaagatggaattttgag 151  Q
    ||||| | |||||||  ||||| |||||||    
T  6520760 cctgaaatagtttaagaatggatttttgag 6520731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 179
Target Start/End: Original strand, 22252763 - 22252875
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaac 166  Q
    ||||||||| ||||||||| | |||||||||||||||||||||||||| || |||| |  | ||||| |||   ||| ||||| ||||||||||||||      
T  22252763 tgagtgccttaacatgtataagaatgattaggcaagtttttagattgaaatggaacatatggaagttaaaaatgggatttttgggtgaaaaatgtcaagt 22252862  T
Q  167 tcccgagagcacc 179  Q
    |||||||||||||    
T  22252863 tcccgagagcacc 22252875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 25 - 124
Target Start/End: Complemental strand, 21491481 - 21491382
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||||||| |||||||  ||||||||||| |||| || || ||||||||||||||||| | |||||||||||| |||  | |||| |||||||||||||    
T  21491481 gattttgtaattttgacttttaagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 21491382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 122
Target Start/End: Original strand, 19154459 - 19154538
Alignment:
Q  43 cttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    ||||||| |||| |||| || || ||||| |||||| |||||| |||||||||||| ||||||||||| |||||||||||    
T  19154459 cttaagtcgaacattagatgattttgagttcctgaatatgtattataatgattagggaagtttttagactgagattgaac 19154538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 5610265 - 5610338
Alignment:
Q  20 aacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatga 93  Q
    ||||||||||||||||| ||||| |||||| |||| |||| ||||| |||||| |||||| |||||||| ||||    
T  5610265 aacatgattttgtagttatgacctttaagtcgaaccttagatgtttttgagtgtctgaacttgtatgatgatga 5610338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 5865909 - 5866010
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||| ||| |||||||  || |||||||| |||| || || ||||||||||||||||| | |||||||||||| |||  | |||| |||||||||||||    
T  5865909 gatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 5866008  T
Q  125 ga 126  Q
    ||    
T  5866009 ga 5866010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 126
Target Start/End: Complemental strand, 17141402 - 17141301
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||||||| |||| ||  || |||||||| |||| || || ||||||||||||||||| | |||||||||||| |||  | |||| |||||||||||||    
T  17141402 gattttgtattttttacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 17141303  T
Q  125 ga 126  Q
    ||    
T  17141302 ga 17141301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 20462458 - 20462507
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    |||||||||| ||||||||||  |||||||||||||||||||||||||||    
T  20462458 tgtaacgcccactttttattaattaattatttaatcgagtctagacgagt 20462507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 20464839 - 20464888
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    |||||||||| ||||||||||  |||||||||||||||||||||||||||    
T  20464839 tgtaacgcccactttttattaattaattatttaatcgagtctagacgagt 20464888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 186
Target Start/End: Original strand, 13661325 - 13661444
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaac 166  Q
    ||||||||| ||||||||| | ||||||||||||||||||| |||    |||| || |  | |||||||||   ||| ||||| ||||||||||||||      
T  13661325 tgagtgccttaacatgtataagaatgattaggcaagtttttggatcagaattggacgtagggaagtttaaaatgggatttttgggtgaaaaatgtcaagt 13661424  T
Q  167 tcccgagagcaccttgtttc 186  Q
    ||||||||||||| ||||||    
T  13661425 tcccgagagcaccctgtttc 13661444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 186
Target Start/End: Original strand, 13719968 - 13720087
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaac 166  Q
    ||||||||| ||||||||| | ||||||||||||||||||| |||    |||| || |  | |||||||||   ||| ||||| ||||||||||||||      
T  13719968 tgagtgccttaacatgtataagaatgattaggcaagtttttggatcagaattggacgtagggaagtttaaaatgggatttttgggtgaaaaatgtcaagt 13720067  T
Q  167 tcccgagagcaccttgtttc 186  Q
    ||||||||||||| ||||||    
T  13720068 tcccgagagcaccctgtttc 13720087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 177
Target Start/End: Original strand, 19929230 - 19929340
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaac 166  Q
    ||||||||||||||| ||| | ||||| |||| ||||||||||||||| |||| || |  | ||||| |||   ||| ||||| ||||||||||||||      
T  19929230 tgagtgcctgaacatttataaaaatgaataggaaagtttttagattgaaattggacgttgggaagttaaaaatgggatttttgggtgaaaaatgtcaagt 19929329  T
Q  167 tcccgagagca 177  Q
    |||||||||||    
T  19929330 tcccgagagca 19929340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 125
Target Start/End: Complemental strand, 20536675 - 20536597
Alignment:
Q  47 agttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    |||||||| |||| || || ||||||||||||||||| |||||||||||||| |||  | |||  ||||||||||||||    
T  20536675 agttgaaccttagatgcttttgagtgcctgaacatgtctgataatgattaggaaagaatgtaggatgagattgaacctg 20536597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 179
Target Start/End: Original strand, 22419012 - 22419125
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattga-gattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaa 165  Q
    ||||||||| || || ||| | |||||||||  ||||||||||||||| |||||||| || | ||||| |||   ||| ||||| |||||||||||||||    
T  22419012 tgagtgcctaaatatttataagaatgattagttaagtttttagattgaagattgaacatggggaagttaaaaatgggatttttgggtgaaaaatgtcaaa 22419111  T
Q  166 ctcccgagagcacc 179  Q
     |||||| ||||||    
T  22419112 ttcccgaaagcacc 22419125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 25848867 - 25848916
Alignment:
Q  129 aagtttaaagatggaatttt-gagtgaaaaatgtcaaactcccgagagca 177  Q
    ||||||||| |||| ||||| |||||||||||||||||||||||||||||    
T  25848867 aagtttaaaaatgggatttttgagtgaaaaatgtcaaactcccgagagca 25848916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 177
Target Start/End: Complemental strand, 19699684 - 19699648
Alignment:
Q  141 ggaattttgagtgaaaaatgtcaaactcccgagagca 177  Q
    ||||||||| |||||||||||||||||||||||||||    
T  19699684 ggaattttgggtgaaaaatgtcaaactcccgagagca 19699648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 125
Target Start/End: Original strand, 26355366 - 26355430
Alignment:
Q  61 tgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    ||||| ||||||||||||||||| | ||||||||||||  || ||  ||||||||||||||||||    
T  26355366 tgtttttgagtgcctgaacatgtctaataatgattaggagagattgaagattgagattgaacctg 26355430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 176
Target Start/End: Complemental strand, 17218202 - 17218171
Alignment:
Q  145 ttttgagtgaaaaatgtcaaactcccgagagc 176  Q
    ||||||||||||||||||||||||||||||||    
T  17218202 ttttgagtgaaaaatgtcaaactcccgagagc 17218171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 176
Target Start/End: Original strand, 17907407 - 17907438
Alignment:
Q  145 ttttgagtgaaaaatgtcaaactcccgagagc 176  Q
    ||||||||||||||||||||||||||||||||    
T  17907407 ttttgagtgaaaaatgtcaaactcccgagagc 17907438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 264
Target Start/End: Original strand, 19258399 - 19258446
Alignment:
Q  217 taacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    |||||||| ||||| ||||  |||||||||||||||||||||||||||    
T  19258399 taacgcccacttttgattaattaattatttaatcgagtctagacgagt 19258446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 62 - 125
Target Start/End: Complemental strand, 21674157 - 21674094
Alignment:
Q  62 gtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    |||| ||||||||||||||||| | |||||||||||| ||| ||  ||| ||||||||||||||    
T  21674157 gtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctg 21674094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 176
Target Start/End: Complemental strand, 22254275 - 22254244
Alignment:
Q  145 ttttgagtgaaaaatgtcaaactcccgagagc 176  Q
    ||||||||||||||||||||||||||||||||    
T  22254275 ttttgagtgaaaaatgtcaaactcccgagagc 22254244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 141 - 176
Target Start/End: Original strand, 23900539 - 23900574
Alignment:
Q  141 ggaattttgagtgaaaaatgtcaaactcccgagagc 176  Q
    |||||||||||||||||||||||||||| |||||||    
T  23900539 ggaattttgagtgaaaaatgtcaaactcacgagagc 23900574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 264
Target Start/End: Complemental strand, 11609530 - 11609480
Alignment:
Q  214 ctgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    ||||||||||| |||||  |||  |||||||||||||||||||||||||||    
T  11609530 ctgtaacgcccacttttatttaattaattatttaatcgagtctagacgagt 11609480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 17342375 - 17342424
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    |||||||||| | ||| ||||  |||||||||||||||||||||||||||    
T  17342375 tgtaacgcccacatttaattaattaattatttaatcgagtctagacgagt 17342424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 17615370 - 17615309
Alignment:
Q  61 tgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    ||||| |||| |||||||||||||   ||||||||||||||  ||||||| |||||||||||    
T  17615370 tgtttatgagggcctgaacatgtactctaatgattaggcaaagttttagaatgagattgaac 17615309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 19900315 - 19900266
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    |||||||||| ||||| ||||  |||||||||||| ||||||||||||||    
T  19900315 tgtaacgcccacttttaattaattaattatttaattgagtctagacgagt 19900266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 122
Target Start/End: Original strand, 22385379 - 22385412
Alignment:
Q  89 aatgattaggcaagtttttagattgagattgaac 122  Q
    |||||||||||||||||||||||||| |||||||    
T  22385379 aatgattaggcaagtttttagattgaaattgaac 22385412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 178
Target Start/End: Complemental strand, 28398058 - 28397963
Alignment:
Q  80 atgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatg-gaattttgagtgaaaaatgtcaaactcccgagagcac 178  Q
    |||||| ||||||||||| |   |||||||||||| ||||||| || ||||||| ||| ||| || ||||| ||||||||||||||| | ||||||||||    
T  28398058 atgtataataatgattagac---tttttagattgaaattgaacatgggaaagttaaaa-atgagatttttgggtgaaaaatgtcaaatttccgagagcac 28397963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 28854403 - 28854342
Alignment:
Q  61 tgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    ||||| |||| |||||||||||||   ||||||||||||||  |||||||||||| ||||||    
T  28854403 tgtttatgagggcctgaacatgtaccttaatgattaggcaaagttttagattgagtttgaac 28854342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 177
Target Start/End: Complemental strand, 23418941 - 23418909
Alignment:
Q  145 ttttgagtgaaaaatgtcaaactcccgagagca 177  Q
    ||||||||||||| |||||||||||||||||||    
T  23418941 ttttgagtgaaaagtgtcaaactcccgagagca 23418909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 125
Target Start/End: Original strand, 45130687 - 45130763
Alignment:
Q  49 ttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    |||||| |||| || || ||||||||||||||||| | |||||||||||| |||  | |||  ||||||||||||||    
T  45130687 ttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 45130763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 15 - 204
Target Start/End: Complemental strand, 13143 - 12953
Alignment:
Q  15 gagtgaacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattga 114  Q
    |||| ||||||||||||| |||||||||||||||||||||||||| || || ||||||||||| |||||||  |||||||||||||||||||||||||||    
T  13143 gagtcaacatgattttgtggttttgacccttaagttgaactttagatgattttgagtgcctgaccatgtatattaatgattaggcaagtttttagattga 13044  T
Q  115 gattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactcccgagagcaccttgtttc-agttcgccatggcgagtt 204  Q
    ||||||||||||||||||||||| ||||| ||||| ||| ||||||||||| |||||||||||||  |||||  |||||||| ||||||||    
T  13043 gattgaacctgagaaagtttaaaaatggatttttgggtggaaaatgtcaaattcccgagagcacccagtttctggttcgccaaggcgagtt 12953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 15 - 205
Target Start/End: Original strand, 1325 - 1516
Alignment:
Q  15 gagtgaacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattga 114  Q
    |||| ||||||||||||| ||||||||||| ||||||||||| || || || |||||||||||||||||||  |||||||||| ||||||||||||||||    
T  1325 gagtcaacatgattttgtggttttgaccctaaagttgaacttcagatgattttgagtgcctgaacatgtatattaatgattagacaagtttttagattga 1424  T
Q  115 gattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactcccgagagcaccttgtttc-agttcgccatggcgagttg 205  Q
    ||||||||||||||||||||||| ||||| ||||| ||||||||||||||| |||||||||||||  |||||  |||||||| |||||||||    
T  1425 gattgaacctgagaaagtttaaaaatggatttttgggtgaaaaatgtcaaattcccgagagcaccaagtttctggttcgccaaggcgagttg 1516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 111; Significance: 5e-56; HSPs: 3)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 44 - 214
Target Start/End: Complemental strand, 13677 - 13507
Alignment:
Q  44 ttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatgga 143  Q
    |||||| ||||||||| || |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||    
T  13677 ttaagtcgaactttagatgattctaagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaagaatgga 13578  T
Q  144 attttgagtgaaaaatgtcaaactcccgagagcaccttgtttcagttcgccatggcgagttgtgagttcgc 214  Q
     ||||| |||| |||||||||||||||||||||| | | ||||||||||||||||||||| ||||||||||    
T  13577 tttttgggtgataaatgtcaaactcccgagagcaacctttttcagttcgccatggcgagtagtgagttcgc 13507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 67 - 179
Target Start/End: Complemental strand, 3217 - 3105
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaac 166  Q
    |||||||||||| |||||  |||||||||||||||||||||||||||||||||||| || ||||||||||| ||||| ||||| |||||||||||||||     
T  3217 tgagtgcctgaatatgtacaataatgattaggcaagtttttagattgagattgaacttgggaaagtttaaaaatggatttttgggtgaaaaatgtcaaat 3118  T
Q  167 tcccgagagcacc 179  Q
    |||||||||||||    
T  3117 tcccgagagcacc 3105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 100 - 214
Target Start/End: Original strand, 15729 - 15843
Alignment:
Q  100 aagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactcccgagagcaccttgtttcagttcgccatggc 199  Q
    ||||||||||||||||||||| |||| ||||||||||   |||| ||||| |||||||||||||||||||| |||| | | | |||||||||||||||||    
T  15729 aagtttttagattgagattgatcctgggaaagtttaagactggatttttgggtgaaaaatgtcaaactcccaagagaaacctttttcagttcgccatggc 15828  T
Q  200 gagttgtgagttcgc 214  Q
    |||| ||||||||||    
T  15829 gagtagtgagttcgc 15843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 99; Significance: 8e-49; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 44 - 205
Target Start/End: Complemental strand, 80808 - 80646
Alignment:
Q  44 ttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatgga 143  Q
    |||||| ||||||||| || || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  80808 ttaagtcgaactttagatgattttgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatgga 80709  T
Q  144 attttgagtgaaaaatgtcaaactcccgagagcaccttgtttc-agttcgccatggcgagttg 205  Q
     ||||| ||||||||||||||| |||||||||||||  |||||  |||||||| |||||||||    
T  80708 tttttgggtgaaaaatgtcaaattcccgagagcacccagtttctggttcgccaaggcgagttg 80646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 44 - 203
Target Start/End: Original strand, 128545 - 128705
Alignment:
Q  44 ttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatgga 143  Q
    |||||| || |||||| || || | |||||||||| |||||| |||||||||||||||||| | ||||||||||||||||||  |||||||| | |||||    
T  128545 ttaagtcgagctttagatgattttaagtgcctgaatatgtataataatgattaggcaagttatgagattgagattgaacctggaaaagtttataaatgga 128644  T
Q  144 attttgagtgaaaaatgtcaaactcccgagagcaccttgtttc-agttcgccatggcgagt 203  Q
     ||||| ||||||||||||||| |||||||||||||| |||||  |||||||| |||||||    
T  128645 tttttgggtgaaaaatgtcaaattcccgagagcacctagtttcttgttcgccaaggcgagt 128705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 15 - 179
Target Start/End: Complemental strand, 7230 - 7065
Alignment:
Q  15 gagtgaacatgat-tttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattg 113  Q
    |||| |||||||| ||||||||||||| |||||||||||| ||||| || || |||||| ||||| |||||| |||||||||||||||||||||||||||    
T  7230 gagtcaacatgatctttgtagttttgaaccttaagttgaattttagatgattttgagtgactgaatatgtataataatgattaggcaagtttttagattg 7131  T
Q  114 agattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
    |||||||||||| ||||||||||| ||||| ||||||||||||||| ||||  |||||||||||||    
T  7130 agattgaacctgggaaagtttaaaaatggatttttgagtgaaaaatatcaagttcccgagagcacc 7065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 44 - 203
Target Start/End: Original strand, 1372 - 1532
Alignment:
Q  44 ttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatgga 143  Q
    |||||| ||||||||| || |||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||| |||||||||||| |||||    
T  1372 ttaagtcgaactttagatgattctgagtgcctgaacatgtataataatgagtaggcaagtttttagatggagattgaacctcagaaagtttaaaaatgga 1471  T
Q  144 attttgagtgaaaaatgtcaaactcccgagagcaccttgtttc-agttcgccatggcgagt 203  Q
     ||||| ||||||||||||||| ||| |||||||||| |||||  |||||||| |||||||    
T  1472 tttttgggtgaaaaatgtcaaattcctgagagcacctagtttcttgttcgccaaggcgagt 1532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 92; Significance: 1e-44; HSPs: 4)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 44 - 179
Target Start/End: Original strand, 60289 - 60424
Alignment:
Q  44 ttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatgga 143  Q
    |||||| ||||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||||| |||||    
T  60289 ttaagtcgaactttagatgattctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacatgggaaagtttaaaaatgga 60388  T
Q  144 attttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
     ||||| |||||||||||| || |||||||||||||    
T  60389 tttttgggtgaaaaatgtcgaattcccgagagcacc 60424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 71 - 202
Target Start/End: Complemental strand, 1136 - 1005
Alignment:
Q  71 tgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactccc 170  Q
    |||||||||| |||| | |||||||||||||||||| ||||||| |||| || || | ||||| |||   ||| ||||| ||||||||||||||| ||||    
T  1136 tgcctgaacaggtataagaatgattaggcaagttttcagattgacattgcacatggggaagttaaaaatgggatttttgggtgaaaaatgtcaaattccc 1037  T
Q  171 gagagcaccttgtttcagttcgccatggcgag 202  Q
    |||||||||  ||||| |||| ||| ||||||    
T  1036 gagagcacccagtttctgttccccaaggcgag 1005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 176
Target Start/End: Original strand, 126779 - 126888
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaac 166  Q
    ||||||||| ||||||| |   ||||||||||||||||||| |||| || ||| || |  | ||||| |||   ||| ||||||||||||||||||||||    
T  126779 tgagtgccttaacatgtttagaaatgattaggcaagtttttggattaagtttggacatagggaagttaaaaatgggatttttgagtgaaaaatgtcaaac 126878  T
Q  167 tcccgagagc 176  Q
    | ||||||||    
T  126879 ttccgagagc 126888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 125
Target Start/End: Complemental strand, 130360 - 130296
Alignment:
Q  61 tgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    ||||| ||||||||||||||||| |  | ||||||||  ||| || |||||||||||||||||||    
T  130360 tgtttttgagtgcctgaacatgtctagttatgattagaaaagattctagattgagattgaacctg 130296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 46 - 179
Target Start/End: Complemental strand, 268196 - 268062
Alignment:
Q  46 aagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatgga-a 144  Q
    |||||||||||||| || |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||      
T  268196 aagttgaactttagatgattctaagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatt 268097  T
Q  145 ttttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
    ||||| ||||||||||||||| |||||||||||||    
T  268096 ttttgggtgaaaaatgtcaaattcccgagagcacc 268062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 2e-43; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 42 - 179
Target Start/End: Complemental strand, 23275213 - 23275076
Alignment:
Q  42 ccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatg 141  Q
    ||||||||||||| |||| || || |||||||||||| |||||| |||||||||||||||||||||||||||||||||||| || ||||||||||| |||    
T  23275213 ccttaagttgaaccttagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacttgggaaagtttaaaaatg 23275114  T
Q  142 gaattttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
    || ||||||||||||||||||||  |||||||||||||    
T  23275113 gatttttgagtgaaaaatgtcaagttcccgagagcacc 23275076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 27 - 179
Target Start/End: Original strand, 23412807 - 23412960
Alignment:
Q  27 ttttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctga 126  Q
    |||||| |||||| |||||||||||||| |||| || || |||||||||||| |||||| | ||||||||||||||||||||||||||||||| |||||     
T  23412807 ttttgtcgttttgtcccttaagttgaaccttagatgattttgagtgcctgaatatgtataaaaatgattaggcaagtttttagattgagattggacctgg 23412906  T
Q  127 gaaagtttaaagatggaattttgagtgaaaaatgtcaaa-ctcccgagagcacc 179  Q
    ||||||||||| ||||| |||||||||||||||||||||  |||||||||||||    
T  23412907 gaaagtttaaaaatggatttttgagtgaaaaatgtcaaagttcccgagagcacc 23412960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 43927652 - 43927517
Alignment:
Q  42 ccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatg 141  Q
    |||||||| ||||||||| || || ||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||| ||||||||||| |||    
T  43927652 ccttaagtcgaactttagatgattttgagtgcctgaacatgtataataatgattagacaagtttttagattgagtttgaacctgggaaagtttaaaaatg 43927553  T
Q  142 gaattttgagtgaaaaatgtcaaactcccgagagca 177  Q
    || ||||| ||||||||||||||| |||||||||||    
T  43927552 gatttttgggtgaaaaatgtcaaattcccgagagca 43927517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 44 - 179
Target Start/End: Original strand, 22109926 - 22110061
Alignment:
Q  44 ttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatgga 143  Q
    |||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||  |||| || |||||    
T  22109926 ttaagttgaactttagatgtttttgagtgcctgaacatgtataataatgattaggcaagtttttagtttgagattgaacctgtgagtgtttgaaaatgga 22110025  T
Q  144 attttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
     ||||| | ||||||||||||| |||||||||||||    
T  22110026 tttttgggggaaaaatgtcaaattcccgagagcacc 22110061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 27 - 179
Target Start/End: Complemental strand, 45797730 - 45797577
Alignment:
Q  27 ttttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctga 126  Q
    |||||| | |||| ||||||||||||||||||| || || |||||||||||| |||||| |||||||||||| |||||||||||||||||||| |||||     
T  45797730 ttttgtcgatttgtcccttaagttgaactttagatgattttgagtgcctgaatatgtataataatgattaggtaagtttttagattgagattggacctgg 45797631  T
Q  127 gaaagtttaaagatggaattttgagtgaaaaatgtcaaa-ctcccgagagcacc 179  Q
    ||| ||||||| ||||| ||||||| |||||||||||||  |||||||||||||    
T  45797630 gaaggtttaaaaatggatttttgagcgaaaaatgtcaaagttcccgagagcacc 45797577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 42 - 201
Target Start/End: Complemental strand, 316668 - 316508
Alignment:
Q  42 ccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagat- 140  Q
    |||||||| ||||||||| ||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||| |||  |||||| |||||| ||     
T  316668 ccttaagtcgaactttagatgtttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattaaacacgagaaattttaaaaatg 316569  T
Q  141 ggaattttgagtgaaaaatgtcaaactcccgagagcaccttgtttcagttcgccatggcga 201  Q
    ||| ||||| ||||||||||||||| |||||||||||||   ||| ||||||||| |||||    
T  316568 ggatttttgggtgaaaaatgtcaaattcccgagagcacccaattttagttcgccaaggcga 316508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 44 - 179
Target Start/End: Original strand, 37250763 - 37250898
Alignment:
Q  44 ttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatgga 143  Q
    |||||| ||||||||| || ||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  37250763 ttaagtcgaactttagatgattctgagtatctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatgga 37250862  T
Q  144 attttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
     |||||  || ||||||| ||| |||||||||||||    
T  37250863 tttttggatggaaaatgtaaaattcccgagagcacc 37250898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 15 - 179
Target Start/End: Complemental strand, 14501699 - 14501533
Alignment:
Q  15 gagtgaacatgatttt-gtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattg 113  Q
    |||| ||||||||||| || | |||| |||||||||||||| |||| || || |||||||||||| |||||| |||||||||||||||| ||||||||||    
T  14501699 gagtcaacatgatttttgtcgatttgtcccttaagttgaaccttagatgattttgagtgcctgaatatgtataataatgattaggcaaggttttagattg 14501600  T
Q  114 agattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtc-aaactcccgagagcacc 179  Q
    |||||| ||||| ||| ||||||| ||||| ||||||| |||||||||| ||| |||||||||||||    
T  14501599 agattggacctgggaaggtttaaaaatggatttttgagcgaaaaatgtcaaaattcccgagagcacc 14501533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 43 - 179
Target Start/End: Original strand, 605941 - 606077
Alignment:
Q  43 cttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatgg 142  Q
    |||||||||||| |||| || || ||||||||||||  ||||| ||||||||||||||| ||| |||||||||||||||||||  |||||||||| ||||    
T  605941 cttaagttgaaccttagatgattttgagtgcctgaatgtgtataataatgattaggcaattttctagattgagattgaacctggaaaagtttaaaaatgg 606040  T
Q  143 aattttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
    | ||||| ||||| ||||||||| |||||||||||||    
T  606041 atttttgggtgaacaatgtcaaattcccgagagcacc 606077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 123
Target Start/End: Original strand, 2050819 - 2050931
Alignment:
Q  11 cagagagtgaacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttaga 110  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||| ||||||| | |||||||||||| ||| || ||||    
T  2050819 cagagagtcaacatgattttgtagttttgacccttaagttgaaccttagatgtttttgagtgcctcaacatgtgtaataatgattaggaaagattctaga 2050918  T
Q  111 ttgagattgaacc 123  Q
    |||||||||||||    
T  2050919 ttgagattgaacc 2050931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 21837972 - 21837836
Alignment:
Q  42 ccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatg 141  Q
    |||||||| ||| ||||| || || |||||| ||||| |||||| |||||||||||||||||||||||||||||||||||| || ||||||||||| |||    
T  21837972 ccttaagtcgaaatttagatgattttgagtgtctgaatatgtataataatgattaggcaagtttttagattgagattgaacttgggaaagtttaaaaatg 21837873  T
Q  142 gaattttgagtg-aaaaatgtcaaactcccgagagca 177  Q
    || ||||  ||| ||||| |||||| |||||||||||    
T  21837872 gatttttaggtgaaaaaaagtcaaattcccgagagca 21837836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 1465036 - 1465141
Alignment:
Q  20 aacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattg 119  Q
    ||||||||||||||||||||||| |||||| |||| |||| ||||| ||||||||||||| |||||||| ||||||| | ||| || |||||||||||||    
T  1465036 aacatgattttgtagttttgacctttaagtcgaaccttagatgtttttgagtgcctgaacttgtatgatgatgattatgaaagattgtagattgagattg 1465135  T
Q  120 aacctg 125  Q
    ||||||    
T  1465136 aacctg 1465141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 67 - 179
Target Start/End: Complemental strand, 12378443 - 12378332
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaac 166  Q
    |||||||||||| |||||  |||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||| ||||| ||| |||||||||||     
T  12378443 tgagtgcctgaatatgtacaataatgattaggcatgtttttagattgagattgaacctgggaaagtttaaaaatggatttttgggtg-aaaatgtcaaat 12378345  T
Q  167 tcccgagagcacc 179  Q
    ||  |||||||||    
T  12378344 tcatgagagcacc 12378332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 67 - 179
Target Start/End: Complemental strand, 15246544 - 15246432
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaac 166  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||| ||||||| || | ||||| |||   ||| ||||| || ||||||||||||     
T  15246544 tgagtgtctgaacatgtatgagaatgattaggcaagtttttagattgaaattgaacatggggaagttaaaaatgggatttttgggttaaaaatgtcaaat 15246445  T
Q  167 tcccgagagcacc 179  Q
    |||||||||||||    
T  15246444 tcccgagagcacc 15246432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 31 - 126
Target Start/End: Complemental strand, 42386894 - 42386799
Alignment:
Q  31 gtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctga 126  Q
    |||||||||||| ||||||||||| |||||||||| ||||||| |||||||| || ||||||||||||||||  |||||| || ||||||||||||    
T  42386894 gtagttttgacctttaagttgaaccttagttgtttatgagtgcatgaacatgcataataatgattaggcaagactttagactgtgattgaacctga 42386799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 55 - 179
Target Start/End: Complemental strand, 15265677 - 15265553
Alignment:
Q  55 tttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagat-ggaattttgagtg 153  Q
    ||||||||| | |||||| |||||||||||||| ||||||||||||||||||| |||||| ||||||| || | || |||||| || ||| ||||| ||     
T  15265677 tttagttgtctttgagtgtctgaacatgtatgagaatgattaggcaagttttttgattgaaattgaacatggggaa-tttaaaaatgggatttttgggtt 15265579  T
Q  154 aaaaatgtcaaactcccgagagcacc 179  Q
    |||||||||||| |||||||||||||    
T  15265578 aaaaatgtcaaattcccgagagcacc 15265553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 178
Target Start/End: Complemental strand, 9578125 - 9578014
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaatttt-gagtgaaaaatgtcaaa 165  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |  | ||| ||||| |||| ||||| | ||||||||||||||     
T  9578125 tgagtgcctgaacatgtatgataatgattaggcaagattttagattgaaattgaacatagggaag-ttaaaaatgggattttggggtgaaaaatgtcaag 9578027  T
Q  166 ctcccgagagcac 178  Q
     ||||||||||||    
T  9578026 ttcccgagagcac 9578014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 179
Target Start/End: Complemental strand, 15207462 - 15207350
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaac 166  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||| ||||||| || | ||||  |||   ||| ||||| || ||||||||||||     
T  15207462 tgagtgtctgaacatgtatgagaatgattaggcaagtttttagattgaaattgaacatggggaagtcaaaaatgggatttttgggttaaaaatgtcaaat 15207363  T
Q  167 tcccgagagcacc 179  Q
    |||||||||||||    
T  15207362 tcccgagagcacc 15207350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 145 - 214
Target Start/End: Original strand, 15447417 - 15447487
Alignment:
Q  145 ttttgagtgaaaaatgtcaaa-ctcccgagagcaccttgtttcagttcgccatggcgagttgtgagttcgc 214  Q
    ||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||| ||||||||||    
T  15447417 ttttgagtgaaaaatgtcaaaactcccgagagcaccctttttcagttcgccatggcgagtagtgagttcgc 15447487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 123
Target Start/End: Complemental strand, 14234982 - 14234881
Alignment:
Q  22 catgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaa 121  Q
    ||||||||  || |||||||| ||||||||||| |||| | ||| ||||||||||||||||||| || ||||||||| ||| || |||||||||||||||    
T  14234982 catgatttcataattttgacctttaagttgaaccttagatttttttgagtgcctgaacatgtataatgatgattaggaaagattatagattgagattgaa 14234883  T
Q  122 cc 123  Q
    ||    
T  14234882 cc 14234881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 43 - 122
Target Start/End: Complemental strand, 324706 - 324627
Alignment:
Q  43 cttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    ||||||||||||||||| || || |||||||||||| |||||| |||||||||||| ||| || |||| |||||||||||    
T  324706 cttaagttgaactttagatgattttgagtgcctgaatatgtataataatgattaggaaagattgtagaatgagattgaac 324627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 15471416 - 15471313
Alignment:
Q  22 catgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaa 121  Q
    |||||||| ||| |||||||| || |||||||| |||| ||||| ||||| ||||||||||||| || ||||||||| ||| ||  ||||| ||||||||    
T  15471416 catgatttcgtaattttgacctttgagttgaaccttagatgtttttgagtccctgaacatgtataatgatgattaggaaagattggagattaagattgaa 15471317  T
Q  122 cctg 125  Q
    ||||    
T  15471316 cctg 15471313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 52523345 - 52523459
Alignment:
Q  11 cagagagtgaacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttaga 110  Q
    |||||||| |||||||||| |||||||||  ||||||||||   ||||| || || ||||||||||||||||| | ||||| |||||| ||| || |||     
T  52523345 cagagagtcaacatgatttcgtagttttggtccttaagttggtatttagatgattttgagtgcctgaacatgtgtaataattattaggaaagattctagt 52523444  T
Q  111 ttgagattgaacctg 125  Q
    |||| ||||||||||    
T  52523445 ttgatattgaacctg 52523459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 129
Target Start/End: Original strand, 1644351 - 1644419
Alignment:
Q  61 tgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaa 129  Q
    ||||| ||||||||||||||||| |||||||||||||| ||| ||  ||| ||||||||||||||||||    
T  1644351 tgtttttgagtgcctgaacatgtctgataatgattaggaaagattagagaatgagattgaacctgagaa 1644419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 16689644 - 16689693
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    |||||||||| ||||||||||  |||||||||||||||||||||||||||    
T  16689644 tgtaacgcccactttttattaattaattatttaatcgagtctagacgagt 16689693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 22791792 - 22791719
Alignment:
Q  20 aacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatga 93  Q
    ||||||||||||||||| ||||| |||||| |||| |||| ||||| |||||| |||||| |||||||| ||||    
T  22791792 aacatgattttgtagttatgacctttaagtcgaaccttagatgtttttgagtgtctgaacttgtatgatgatga 22791719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 12933942 - 12934042
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||| ||| |||||||  || |||||| | |||| ||||| ||||||||||||||||| | |||||||||||| ||| ||  ||| |||||||||||||    
T  12933942 gatttcgtacttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacct 12934041  T
Q  125 g 125  Q
    |    
T  12934042 g 12934042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 67 - 175
Target Start/End: Complemental strand, 37428217 - 37428109
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaac 166  Q
    ||||||||| || |||||| | |||||||||||||||||||||||||| ||||||| |  | ||| | |||   ||| ||||| ||||||||||||||      
T  37428217 tgagtgccttaatatgtataagaatgattaggcaagtttttagattgaaattgaacatagggaagctaaaaatgggatttttgggtgaaaaatgtcaagt 37428118  T
Q  167 tcccgagag 175  Q
    |||||||||    
T  37428117 tcccgagag 37428109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 49389276 - 49389376
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||| ||| |||||||  || |||||| | |||| ||||| ||||||||||||||||| | |||||||||||| ||| ||  ||| |||||||||||||    
T  49389276 gatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacct 49389375  T
Q  125 g 125  Q
    |    
T  49389376 g 49389376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 125
Target Start/End: Complemental strand, 16104268 - 16104169
Alignment:
Q  26 attttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    |||| ||| |||||||  || |||||| | |||| ||||||||||||||||||||||| | |||||||||||| ||| ||  ||| |||| |||||||||    
T  16104268 atttcgtaattttgacttttgagttgatccttagatgtttctgagtgcctgaacatgtctaataatgattaggaaagattggagaatgaggttgaacctg 16104169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 125
Target Start/End: Original strand, 17247940 - 17248018
Alignment:
Q  47 agttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    |||||| | |||| ||||| ||||||||||||||||| | |||||||||||| |||  | |||| ||||||||||||||    
T  17247940 agttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 17248018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 264
Target Start/End: Original strand, 26189812 - 26189862
Alignment:
Q  214 ctgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    ||||||||||| ||||||||||  |||||||||||| ||||||||||||||    
T  26189812 ctgtaacgcccactttttattaattaattatttaattgagtctagacgagt 26189862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 603308 - 603369
Alignment:
Q  61 tgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    ||||| |||| |||||||||||||  |||||||||||||||  ||||||| |||||||||||    
T  603308 tgtttatgagagcctgaacatgtactataatgattaggcaaagttttagactgagattgaac 603369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 12399684 - 12399611
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattagg 98  Q
    ||||||||| |||||||  || |||||||| |||| || || ||||||||||||||||| | ||||||||||||    
T  12399684 gattttgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattagg 12399611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 122
Target Start/End: Complemental strand, 14179811 - 14179714
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    ||||| ||| |||||||  || |||||||| |||| || || ||||||||||||||||| | |||||||||||| |||  | |||| |||||||||||    
T  14179811 gatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 14179714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 15009825 - 15009886
Alignment:
Q  61 tgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    ||||| |||| |||||||||||||  |||||||||||||||  ||||||| |||||||||||    
T  15009825 tgtttatgagagcctgaacatgtactataatgattaggcaaagttttagactgagattgaac 15009886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 16370738 - 16370689
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    |||||||||| ||||| ||||  |||||||||||||||||||||||||||    
T  16370738 tgtaacgcccacttttgattaattaattatttaatcgagtctagacgagt 16370689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 16810698 - 16810649
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    |||||||||| ||||||||||  |||||||||||| ||||||||||||||    
T  16810698 tgtaacgcccactttttattaattaattatttaattgagtctagacgagt 16810649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 177
Target Start/End: Original strand, 12512257 - 12512289
Alignment:
Q  145 ttttgagtgaaaaatgtcaaactcccgagagca 177  Q
    |||||||||||||||||||||||||||||||||    
T  12512257 ttttgagtgaaaaatgtcaaactcccgagagca 12512289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 177
Target Start/End: Original strand, 14250562 - 14250594
Alignment:
Q  145 ttttgagtgaaaaatgtcaaactcccgagagca 177  Q
    |||||||||||||||||||||||||||||||||    
T  14250562 ttttgagtgaaaaatgtcaaactcccgagagca 14250594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 16044987 - 16044951
Alignment:
Q  140 tggaattttgagtgaaaaatgtcaaactcccgagagc 176  Q
    |||| ||||||||||||||||||||||||||||||||    
T  16044987 tggatttttgagtgaaaaatgtcaaactcccgagagc 16044951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 16059847 - 16059811
Alignment:
Q  140 tggaattttgagtgaaaaatgtcaaactcccgagagc 176  Q
    |||| ||||||||||||||||||||||||||||||||    
T  16059847 tggatttttgagtgaaaaatgtcaaactcccgagagc 16059811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 20698079 - 20698179
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||||||| |||||||  || |||||||| |||| || || |||||| |||||||||| | |||||||||||| |||  | |||  |||||||||||||    
T  20698079 gattttgtaattttgacttttgagttgaaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 20698178  T
Q  125 g 125  Q
    |    
T  20698179 g 20698179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 126
Target Start/End: Complemental strand, 9513357 - 9513298
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctga 126  Q
    ||||||||||||||||| | |||||||||||| ||| ||  ||| |||||||||||||||    
T  9513357 tgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctga 9513298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 126
Target Start/End: Complemental strand, 9521332 - 9521273
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctga 126  Q
    ||||||||||||||||| | |||||||||||| ||| ||  ||| |||||||||||||||    
T  9521332 tgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctga 9521273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 18959361 - 18959286
Alignment:
Q  47 agttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    |||| ||| |||| ||||| |||| |||||||||||||   ||||||||||||||  ||||||| |||||||||||    
T  18959361 agtttaaccttaggtgtttatgagggcctgaacatgtaccttaatgattaggcaaagttttagaatgagattgaac 18959286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 264
Target Start/End: Original strand, 320839 - 320889
Alignment:
Q  214 ctgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    ||||||||||| ||||| ||||  |||||||||||| ||||||||||||||    
T  320839 ctgtaacgcccacttttaattaattaattatttaattgagtctagacgagt 320889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 125
Target Start/End: Complemental strand, 14573035 - 14572977
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    ||||||||||||||||| | |||||||||||| |||  | |||| ||||||||||||||    
T  14573035 tgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 14572977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 264
Target Start/End: Original strand, 17673396 - 17673446
Alignment:
Q  214 ctgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    ||||||||||| ||||| ||||  ||||||||||||||||| |||||||||    
T  17673396 ctgtaacgcccacttttaattaattaattatttaatcgagtttagacgagt 17673446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 125
Target Start/End: Original strand, 53070373 - 53070431
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    ||||||||||||||||| | |||||||||||| |||  | |||| ||||||||||||||    
T  53070373 tgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctg 53070431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 194
Target Start/End: Original strand, 16382550 - 16382591
Alignment:
Q  153 gaaaaatgtcaaactcccgagagcaccttgtttcagttcgcc 194  Q
    ||||||||||||||||||||||||||| | |||| |||||||    
T  16382550 gaaaaatgtcaaactcccgagagcaccatttttctgttcgcc 16382591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 172
Target Start/End: Complemental strand, 11563245 - 11563205
Alignment:
Q  133 ttaaagatggaatttt-gagtgaaaaatgtcaaactcccga 172  Q
    ||||| |||||||||| ||||||||||||||||||||||||    
T  11563245 ttaaaaatggaatttttgagtgaaaaatgtcaaactcccga 11563205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 98
Target Start/End: Original strand, 12171750 - 12171822
Alignment:
Q  26 attttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattagg 98  Q
    |||| ||| |||||||  || |||||| | |||| ||||| ||||||||||||||||| | ||||||||||||    
T  12171750 atttcgtaattttgactttttagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattagg 12171822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 49667716 - 49667815
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||| ||| |||||||  || |||||| | |||| ||||| |||| |||||||||||| | |||||||||||| ||| ||  ||| |||||||||||||    
T  49667716 gatttcgtacttttgacttttgagttgatccttagatgttt-tgagcgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacct 49667814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 54047165 - 54047109
Alignment:
Q  61 tgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagat 117  Q
    ||||| |||| |||||||||||||  |||||||||||||||  ||||||| ||||||    
T  54047165 tgtttatgagagcctgaacatgtactataatgattaggcaaagttttagactgagat 54047109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 44 - 186
Target Start/End: Complemental strand, 38843 - 38701
Alignment:
Q  44 ttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatgga 143  Q
    |||||| |||| |||| || |||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||  | ||    
T  38843 ttaagtcgaaccttagatgattctgagtgcgtgaatatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaattaga 38744  T
Q  144 attttgagtgaaaaatgtcaaactcccgagagcaccttgtttc 186  Q
     ||||| ||||||||||||||| |||||||||||||| |||||    
T  38743 tttttgggtgaaaaatgtcaaattcccgagagcacctagtttc 38701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 27 - 165
Target Start/End: Original strand, 35504 - 35642
Alignment:
Q  27 ttttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctga 126  Q
    ||||||||||||| |||||||||||||| |||  || || |||||||||||| |||||| ||||||||||||||||||||||||||||||| | ||||||    
T  35504 ttttgtagttttgtcccttaagttgaaccttaaatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagatcggacctga 35603  T
Q  127 gaaagtttaaagatggaattttgagtgaaaaatgtcaaa 165  Q
    |||||||||||  |||| |||| ||||||||||||||||    
T  35604 gaaagtttaaaagtggatttttaagtgaaaaatgtcaaa 35642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 83; Significance: 3e-39; HSPs: 4)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 65 - 179
Target Start/End: Original strand, 135963 - 136077
Alignment:
Q  65 tctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaa 164  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| | ||||| ||||||||||||||    
T  135963 tctgagtgcttgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatgaatttttgggtgaaaaatgtcaa 136062  T
Q  165 actcccgagagcacc 179  Q
    | |||||||||||||    
T  136063 attcccgagagcacc 136077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 65 - 179
Target Start/End: Original strand, 144671 - 144785
Alignment:
Q  65 tctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaa 164  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| | ||||| ||||||||||||||    
T  144671 tctgagtgcttgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatgaatttttgggtgaaaaatgtcaa 144770  T
Q  165 actcccgagagcacc 179  Q
    | |||||||||||||    
T  144771 attcccgagagcacc 144785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 125
Target Start/End: Complemental strand, 63028 - 62950
Alignment:
Q  47 agttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    |||||| | |||| ||||| ||||||| ||||||||| | |||||||||||| ||| ||  ||| ||||||||||||||    
T  63028 agttgatccttagatgtttttgagtgcatgaacatgtctaataatgattaggaaagattggagaatgagattgaacctg 62950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 133638 - 133699
Alignment:
Q  61 tgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    ||||| |||| |||||||||||||   ||||||||||||||  ||||||| |||||||||||    
T  133638 tgtttatgagggcctgaacatgtaccttaatgattaggcaaagttttagaatgagattgaac 133699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 64 - 179
Target Start/End: Original strand, 103254 - 103369
Alignment:
Q  64 ttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtca 163  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| | ||||| |||||||||||||    
T  103254 ttctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatgaatttttgggtgaaaaatgtca 103353  T
Q  164 aactcccgagagcacc 179  Q
    || |||  ||||||||    
T  103354 aattccttagagcacc 103369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 121
Target Start/End: Complemental strand, 13842 - 13788
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaa 121  Q
    ||||||||| ||||||||| | |||| ||||||||||||| ||||||| ||||||    
T  13842 tgagtgccttaacatgtataagaatggttaggcaagttttcagattgaaattgaa 13788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 15 - 179
Target Start/End: Complemental strand, 14139 - 13973
Alignment:
Q  15 gagtgaacatgatttt-gtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattg 113  Q
    |||| ||||||||||| || |||||| |||||||||||||| |||| || || |||||||||||| |||||| |||||||||||| ||||||||||||||    
T  14139 gagtcaacatgatttttgtcgttttgtcccttaagttgaaccttagatgattttgagtgcctgaatatgtataataatgattaggtaagtttttagattg 14040  T
Q  114 agattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaa-ctcccgagagcacc 179  Q
    |||||| |||||  || ||||||| ||||| ||||||| |||||||||||||  |||||||||||||    
T  14039 agattggacctggtaatgtttaaaaatggatttttgagcgaaaaatgtcaaagttcccgagagcacc 13973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1351 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold1351
Description:

Target: scaffold1351; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 67 - 203
Target Start/End: Complemental strand, 529 - 392
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaac 166  Q
    ||||||| |||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||     
T  529 tgagtgcttgaatatgtataataatgattacgcaagtttttagattgagattgaacctgagaaagtttaaaaatggatttttgggtgaaaaatgtcaaat 430  T
Q  167 tcccgagagcaccttgtttc-agttcgccatggcgagt 203  Q
    |||||| ||||||  |||||  |||||||| |||||||    
T  429 tcccgatagcacccagtttcttgttcgccaaggcgagt 392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 27 - 179
Target Start/End: Original strand, 569 - 722
Alignment:
Q  27 ttttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctga 126  Q
    ||||||||||||| |||||||||||| | |||  || || ||||||| |||| |||||| ||||||||||||||||||||||||| ||||||| ||||||    
T  569 ttttgtagttttgtcccttaagttgatccttaaatgattttgagtgcatgaatatgtataataatgattaggcaagtttttagatggagattggacctga 668  T
Q  127 gaaagtttaaagatggaattttgagtgaaaaatgtcaaa-ctcccgagagcacc 179  Q
    ||||||| |||  |||| |||||||||||||||||||||  |||||||||||||    
T  669 gaaagttgaaaagtggatttttgagtgaaaaatgtcaaagttcccgagagcacc 722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 67 - 179
Target Start/End: Original strand, 7695 - 7807
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaac 166  Q
    ||||||||||||  |||||  ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||     
T  7695 tgagtgcctgaatctgtatattaatgattaggcacgtttttagattgagattgaacctgggaaagtttaaagatggatttttgagtgaaaaatgtcaaat 7794  T
Q  167 tcccgagagcacc 179  Q
    ||| |||||||||    
T  7795 tcctgagagcacc 7807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 124
Target Start/End: Original strand, 28912 - 29011
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||||||| |||||||  ||  ||||||| |||| || || ||||||||||||||||| | |||||||||||| |||  | |||| |||||||||||||    
T  28912 gattttgtaattttgacttttgggttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 29011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1403 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold1403
Description:

Target: scaffold1403; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 45 - 179
Target Start/End: Complemental strand, 1095 - 961
Alignment:
Q  45 taagttgaactttagttg-tttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatgga 143  Q
    ||||||||||||||| || ||| ||||||||||||  ||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||    
T  1095 taagttgaactttagatgatttttgagtgcctgaatgtgtataataatgattaggcaa-tttttagattgagattgaacctgggaaagtttaaaaatgga 997  T
Q  144 attttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
     ||||  ||||||||||||||| |||||||||||||    
T  996 tttttttgtgaaaaatgtcaaattcccgagagcacc 961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 44 - 203
Target Start/End: Original strand, 5906 - 6067
Alignment:
Q  44 ttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagttt-aaagatgg 142  Q
    |||||| || |||||| || || ||||| |||||| |||||| |||||||||||||||||||||||||| || |||||||||||||||||| ||| ||||    
T  5906 ttaagtcgagctttagatgattttgagttcctgaatatgtataataatgattaggcaagtttttagattaagtttgaacctgagaaagtttaaaaaatgg 6005  T
Q  143 aattttgagtgaaaaatgtcaaactcccgagagcaccttgtttc-agttcgccatggcgagt 203  Q
    | ||||| ||||||||||||||| |||||||||||||  |||||  |||||||| |||||||    
T  6006 atttttgggtgaaaaatgtcaaattcccgagagcacccagtttcttgttcgccaaggcgagt 6067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 67 - 180
Target Start/End: Complemental strand, 25629 - 25516
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaac 166  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||  |||||||||| ||||| ||||| |||||||||||||||     
T  25629 tgagtgcctgaaaatgtataataatgattaggcaagtttttagattgagattgaacttggaaaagtttaaaaatggatttttgggtgaaaaatgtcaaat 25530  T
Q  167 tcccgagagcacct 180  Q
    | ||||||||||||    
T  25529 ttccgagagcacct 25516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 54 - 179
Target Start/End: Complemental strand, 58351 - 58226
Alignment:
Q  54 ctttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtg 153  Q
    |||||| ||||| ||||||   ||| |||||| ||||||||||| ||||||||||||||||||||||||  ||||||||||||| ||||||||||| |||    
T  58351 ctttagatgtttttgagtgttggaatatgtatcataatgattagccaagtttttagattgagattgaacacgagaaagtttaaaaatggaattttgggtg 58252  T
Q  154 aaaaatgtcaaactcccgagagcacc 179  Q
    |||||||||||| |||||||||||||    
T  58251 aaaaatgtcaaattcccgagagcacc 58226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 29261 - 29095
Alignment:
Q  15 gagtgaacatgatttt-gtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattg 113  Q
    |||| ||||||||||| || | |||| |||||||||||||| |||| || || |||||||||||| || ||| |||||||||||||||||||||||||||    
T  29261 gagtcaacatgatttttgtcgatttgtcccttaagttgaaccttagatgattttgagtgcctgaatatatataataatgattaggcaagtttttagattg 29162  T
Q  114 agattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaa-ctcccgagagcacct 180  Q
    |||||| ||||| ||| ||||||| || || ||||||| |||||||||||||  ||||||||||||||    
T  29161 agattggacctgggaaggtttaaa-attgatttttgagcgaaaaatgtcaaagttcccgagagcacct 29095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 69; Significance: 6e-31; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 43 - 179
Target Start/End: Complemental strand, 332863 - 332727
Alignment:
Q  43 cttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatgg 142  Q
    |||||||||| |||||| || || |||||||||||| |||||| | |||||||||| ||||||||||||||||||||||| || ||||||| |||   ||    
T  332863 cttaagttgagctttagatgattttgagtgcctgaatatgtataagaatgattaggaaagtttttagattgagattgaacatgggaaagttaaaaatggg 332764  T
Q  143 aattttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
    | ||||| ||||||||||||||| |||||||||||||    
T  332763 atttttgggtgaaaaatgtcaaattcccgagagcacc 332727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 264
Target Start/End: Complemental strand, 71108 - 71058
Alignment:
Q  214 ctgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    ||||||||||| ||||| ||||  |||||||||||| ||||||||||||||    
T  71108 ctgtaacgcccacttttaattaattaattatttaattgagtctagacgagt 71058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 70282 - 70222
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtat 85  Q
    |||||| ||||||||||  || |||||||| |||| ||||| |||||||||||| ||||||    
T  70282 gattttatagttttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgtat 70222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 179
Target Start/End: Original strand, 17887 - 18054
Alignment:
Q  15 gagtgaacatgatttt-gtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattg 113  Q
    |||| ||||||||||| || | |||| |||||||||||||| |||| |  || ||||||| |||| |||||| |||||||||||||||||||||||||||    
T  17887 gagtcaacatgatttttgtcgatttgtcccttaagttgaaccttagataattttgagtgcatgaatatgtataataatgattaggcaagtttttagattg 17986  T
Q  114 agattgaacctgagaaagtttaaagatgga-attttgagtgaaaaatgtcaaa-ctcccgagagcacc 179  Q
    |||||| ||||| ||| ||||||| |||||  ||||||| |||||||||||||  |||||||||||||    
T  17987 agattggacctgggaaggtttaaaaatggattttttgagcgaaaaatgtcaaagttcccgagagcacc 18054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 126
Target Start/End: Complemental strand, 16147 - 16046
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||||||| |||||||  |  |||||| | |||| || || |||||||||||| |||| | |||||||||||| |||  | |||| |||||||||||||    
T  16147 gattttgtaattttgactttagagttgatccttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtagaatgagattgaacct 16048  T
Q  125 ga 126  Q
    ||    
T  16047 ga 16046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 33039 - 32928
Alignment:
Q  11 cagagagtgaacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttaga 110  Q
    |||||||| |||||||||| |||||||||  |||||||||||||||||| || |||||||||||||||||||| | |||||||||||| ||| || ||||    
T  33039 cagagagtcaacatgatttcgtagttttggtccttaagttgaactttagatgattctgagtgcctgaacatgtgtaataatgattaggaaagattctaga 32940  T
Q  111 ttgagattgaac 122  Q
    ||||||||||||    
T  32939 ttgagattgaac 32928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 22 - 179
Target Start/End: Complemental strand, 86113 - 85956
Alignment:
Q  22 catgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaa 121  Q
    |||||||||||||||| ||||||||||| ||||| ||| || || |||||||||| | ||||||  |||||||||||||| |||||||||||||||||||    
T  86113 catgattttgtagtttcgacccttaagtcgaactctagatgattttgagtgcctggatatgtatattaatgattaggcaaatttttagattgagattgaa 86014  T
Q  122 cctgagaaagtttaaagatg-gaattttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
    |  ||| ||| ||||| ||| || ||||| ||||||||||||||  |||||||||||||    
T  86013 caggaggaag-ttaaaaatgagatttttgggtgaaaaatgtcaagttcccgagagcacc 85956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 44 - 203
Target Start/End: Original strand, 17811 - 17972
Alignment:
Q  44 ttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagttt-aaagatgg 142  Q
    |||||| || |||||| || || ||| |||||||| |||||| ||||||||||||||||||||||||||||| ||||| |||||||||||| ||| | ||    
T  17811 ttaagtcgagctttagatgattttgaatgcctgaatatgtataataatgattaggcaagtttttagattgagtttgaatctgagaaagtttaaaaaaagg 17910  T
Q  143 aattttgagtgaaaaatgtcaaactcccgagagcaccttgtttc-agttcgccatggcgagt 203  Q
    | ||||| ||||||||||||||| ||||||||| |||  |||||  |||||||| |||||||    
T  17911 atttttgggtgaaaaatgtcaaattcccgagaggacccagtttcttgttcgccaaggcgagt 17972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 13432 - 13329
Alignment:
Q  22 catgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaa 121  Q
    |||||||| ||| |||||||| || |||||||| |||| ||||| ||||||||||||||||| | || ||||||||| ||| ||  ||||| ||||||||    
T  13432 catgatttcgtaattttgacctttgagttgaaccttagatgtttttgagtgcctgaacatgtctaattatgattaggaaagattggagattaagattgaa 13333  T
Q  122 cctg 125  Q
    ||||    
T  13332 cctg 13329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 2070 - 2158
Alignment:
Q  91 tgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||| ||||| ||||||||||||||| ||||| |||||||||||||    
T  2070 tgattaggcaagtttttagattgagattgaacacgagaaagtttaaaaatggatttttgagtgaaaaatatcaaattcccgagagcacc 2158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 87 - 179
Target Start/End: Complemental strand, 8630 - 8538
Alignment:
Q  87 ataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||| |||||||||||||| |||||  |||||||||||||    
T  8630 ataatgattaggcaagtttttagattgagattgatcctgggaaagtttaaaaatggatttttgagtgaaaaaagtcaagttcccgagagcacc 8538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 125
Target Start/End: Complemental strand, 12498 - 12384
Alignment:
Q  11 cagagagtgaacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttaga 110  Q
    ||||| || |||||||||| |||||||||| |||||||||||  ||||| || || |||||| |||||||||||| |||||||||||| ||| |||||||    
T  12498 cagagtgtcaacatgatttcgtagttttgatccttaagttgatatttagatgattttgagtgtctgaacatgtataataatgattaggaaagattttaga 12399  T
Q  111 ttgagattgaacctg 125  Q
    |||||||||||||||    
T  12398 ttgagattgaacctg 12384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 62; Significance: 9e-27; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 70 - 203
Target Start/End: Complemental strand, 497924 - 497791
Alignment:
Q  70 gtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactcc 169  Q
    |||||||||||||||| ||||||||||||||||| |||||||||| ||||||| || | ||||| |||   ||| ||||| ||||||||||||||  |||    
T  497924 gtgcctgaacatgtataataatgattaggcaagtctttagattgaaattgaacatggggaagttaaaaatgggatttttgggtgaaaaatgtcaagttcc 497825  T
Q  170 cgagagcaccttgtttcagttcgccatggcgagt 203  Q
    ||||||||||   ||||||||||||| |||||||    
T  497824 cgagagcacccattttcagttcgccaaggcgagt 497791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 70 - 203
Target Start/End: Complemental strand, 446993 - 446860
Alignment:
Q  70 gtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactcc 169  Q
    |||||||||||||||| ||||||||||||||||| |||||||||| ||||||| || | ||||| |||   ||| ||||| ||||||||||||||  | |    
T  446993 gtgcctgaacatgtataataatgattaggcaagtctttagattgaaattgaacatggggaagttaaaaatgggatttttgggtgaaaaatgtcaagtttc 446894  T
Q  170 cgagagcaccttgtttcagttcgccatggcgagt 203  Q
    ||||||||||   ||||||||||||| |||||||    
T  446893 cgagagcacccattttcagttcgccaaggcgagt 446860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 125
Target Start/End: Complemental strand, 161173 - 161074
Alignment:
Q  26 attttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    |||| ||| |||||||  || |||||| | |||| ||||| ||||||||||||||||| | |||||||||||| ||| ||  ||| ||||||||||||||    
T  161173 atttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctg 161074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 264
Target Start/End: Original strand, 421341 - 421391
Alignment:
Q  214 ctgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    ||||||||||| ||||| ||||  ||||||||||||||||| |||||||||    
T  421341 ctgtaacgcccacttttaattaattaattatttaatcgagtttagacgagt 421391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1419 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold1419
Description:

Target: scaffold1419; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 573 - 410
Alignment:
Q  40 acccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaaga 139  Q
    |||||| ||| || |||||| || || ||| ||||||||||||||  | |||||||||||||||||||||||||| ||||||| |  ||||||| |||      
T  573 accctttagtcgagctttagatggttttgaatgcctgaacatgtacaagaatgattaggcaagtttttagattgaaattgaacataggaaagttaaaaat 474  T
Q  140 tggaattttgagtgaaaaatgtcaaactcccgagagcaccttgtttc-agttcgccatggcgag 202  Q
     ||| ||||| ||||||||||||||| |||||||||||||  ||||| ||||||||| ||||||    
T  473 gggatttttgggtgaaaaatgtcaaattcccgagagcacccagtttctagttcgccaaggcgag 410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 119200 - 119337
Alignment:
Q  42 ccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagat- 140  Q
    ||||||||||||| |||| || || |||||||||||| |||||| ||||||||||| |||||||||||||||||||||||| || | || |||||| ||     
T  119200 ccttaagttgaacattagatgattttgagtgcctgaatatgtataataatgattagacaagtttttagattgagattgaacatggggaa-tttaaaaatg 119298  T
Q  141 ggaattttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
    ||| ||||| ||||||||||||||  ||||| |||||||    
T  119299 ggatttttgggtgaaaaatgtcaagttcccgggagcacc 119337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 11 - 125
Target Start/End: Complemental strand, 227995 - 227881
Alignment:
Q  11 cagagagtgaacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttaga 110  Q
    |||||||| |||||||||| |||||||||||||||||| |||  ||||  || || ||||||||| ||||||||| |||||||||||| ||| || ||||    
T  227995 cagagagtcaacatgatttcgtagttttgacccttaagctgatatttaaatgattttgagtgcctaaacatgtataataatgattaggaaagattctaga 227896  T
Q  111 ttgagattgaacctg 125  Q
    |||||||||||||||    
T  227895 ttgagattgaacctg 227881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 67 - 179
Target Start/End: Original strand, 220803 - 220915
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaa-ttttgagtgaaaaatgtcaaa 165  Q
    ||||||||||||||||| | | ||||||| | |||||||||||||||| ||||||| |  | ||| ||||| ||| || ||||| |||||||||||||||    
T  220803 tgagtgcctgaacatgtgtaagaatgattcgacaagtttttagattgaaattgaacatagggaag-ttaaaaatgaaatttttgggtgaaaaatgtcaaa 220901  T
Q  166 ctcccgagagcacc 179  Q
     |||||||||||||    
T  220902 ttcccgagagcacc 220915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 37726 - 37863
Alignment:
Q  42 ccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatg 141  Q
    |||||||| || |||||| || || |||||||| ||| |||||| | |||||||||| ||||||||||||||| ||||||| || ||||||| ||||  |    
T  37726 ccttaagtcgagctttagatgattttgagtgccagaatatgtataagaatgattaggaaagtttttagattgaaattgaacatgggaaagttaaaagtgg 37825  T
Q  142 gaattttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
    || ||||| ||||||||||||||| ||||||| |||||    
T  37826 gatttttgggtgaaaaatgtcaaattcccgagtgcacc 37863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 124
Target Start/End: Original strand, 167622 - 167721
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||| ||| |||||||  || |||||||| |||| || || ||||||||||||||||| | |||||||||||| |||  |||||  |||||||||||||    
T  167622 gatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttaggatgagattgaacct 167721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 42 - 201
Target Start/End: Original strand, 206097 - 206257
Alignment:
Q  42 ccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatg 141  Q
    |||||||| ||||||||| || || |||||||||||| |||||| | |||||||| ||||||||||||||||| ||||||| ||  ||||||| || |||    
T  206097 ccttaagtcgaactttagatgattttgagtgcctgaatatgtataagaatgattaagcaagtttttagattgaaattgaacttggaaaagttttaaaatg 206196  T
Q  142 -gaattttgagtgaaaaatgtcaaactcccgagagcaccttgtttcagttcgccatggcga 201  Q
     |  ||||| ||||||||||||||  |||||||||||||   ||| ||||||||| |||||    
T  206197 aggtttttgggtgaaaaatgtcaagttcccgagagcacccaattttagttcgccaaggcga 206257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0914 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0914
Description:

Target: scaffold0914; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 203
Target Start/End: Complemental strand, 2241 - 2091
Alignment:
Q  54 ctttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtg 153  Q
    |||||| ||||| |||||||  ||| |||||| ||||||||||| |||||||||||||||| ||||||| || ||||||| |||   ||| ||||| |||    
T  2241 ctttagatgtttttgagtgctggaatatgtataataatgattagacaagtttttagattgaaattgaacatgggaaagttaaaaatgggatttttgggtg 2142  T
Q  154 aaaaatgtcaaactcccgagagcaccttgtttc-agttcgccatggcgagt 203  Q
    |||||||||||| |||| ||||||||  |||||  |||||||| |||||||    
T  2141 aaaaatgtcaaattcccaagagcacccagtttcttgttcgccaaggcgagt 2091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 125
Target Start/End: Complemental strand, 8519 - 8405
Alignment:
Q  11 cagagagtgaacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttaga 110  Q
    |||||||| |||||||||| |||||||||||||||||||||||| |||  ||||| || ||| ||||| |||| | |||||||||||  ||| || ||||    
T  8519 cagagagtcaacatgatttcgtagttttgacccttaagttgaaccttaaatgtttttgggtgtctgaatatgtgtaataatgattagaaaagattctaga 8420  T
Q  111 ttgagattgaacctg 125  Q
    |||||||||||||||    
T  8419 ttgagattgaacctg 8405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 7300 - 7200
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||| ||| |||||||  || |||||| | |||| ||||| ||||||||||||||||| | |||||||||||| ||| ||  ||| |||||||||||||    
T  7300 gatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacct 7201  T
Q  125 g 125  Q
    |    
T  7200 g 7200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 120
Target Start/End: Original strand, 657 - 755
Alignment:
Q  22 catgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattga 120  Q
    |||||||| |||| ||||||| ||||||||||  |||| ||||| ||||||||||||||||||| |||||||||||| ||| || ||||||||||||||    
T  657 catgatttcgtagatttgacctttaagttgaatcttagatgtttttgagtgcctgaacatgtataataatgattaggaaagattgtagattgagattga 755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0356 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0356
Description:

Target: scaffold0356; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 179
Target Start/End: Original strand, 215 - 371
Alignment:
Q  22 catgattttgtagttttgacccttaagttgaactttagttg-tttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattga 120  Q
    |||||||||||| ||| || |||||||| ||||| ||| || ||| |||||||||| | ||||||  ||||||||||||||||||| |||||||||||||    
T  215 catgattttgtaattt-gatccttaagtcgaactctagatgatttttgagtgcctggatatgtatattaatgattaggcaagtttt-agattgagattga 312  T
Q  121 acctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
    || |||| ||||| |||   ||| ||||| ||||||||||||||  |||||||||||||    
T  313 acatgaggaagttaaaaatgggatttttgggtgaaaaatgtcaagttcccgagagcacc 371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 42 - 164
Target Start/End: Original strand, 19240 - 19362
Alignment:
Q  42 ccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatg 141  Q
    ||||||||||| |||||| || || ||| |||||||| |||| | | |||||||||||||||||||||||||||||||||| || ||||||| |||   |    
T  19240 ccttaagttgagctttagatgattttgaatgcctgaatatgtgtaagaatgattaggcaagtttttagattgagattgaacatgggaaagttaaaaatgg 19339  T
Q  142 gaattttgagtgaaaaatgtcaa 164  Q
    || ||||| ||||||||||||||    
T  19340 gatttttgggtgaaaaatgtcaa 19362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 125
Target Start/End: Complemental strand, 11031 - 10917
Alignment:
Q  11 cagagagtgaacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttaga 110  Q
    |||| ||| |||||||||| |||||||||| ||||||||||||  |||| ||||| ||||||||||||||||| | |||||||||||| ||| |  ||||    
T  11031 cagacagtcaacatgatttcgtagttttgatccttaagttgaatcttagatgtttttgagtgcctgaacatgtgtaataatgattaggaaagatcctaga 10932  T
Q  111 ttgagattgaacctg 125  Q
     ||||||||||||||    
T  10931 ctgagattgaacctg 10917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 42 - 179
Target Start/End: Original strand, 24169 - 24307
Alignment:
Q  42 ccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagat- 140  Q
    ||||||||||||  |||| || || |||||||||||| || ||| |||||||||||||||| ||||||||||||||||||||||  | |||||||| ||     
T  24169 ccttaagttgaagcttagatgattttgagtgcctgaatatatataataatgattaggcaagcttttagattgagattgaacctggaatagtttaaaaatg 24268  T
Q  141 ggaattttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
    ||| ||||| || ||||| |||||  |||||||||||||    
T  24269 ggatttttgggtaaaaaaggtcaagttcccgagagcacc 24307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 54 - 179
Target Start/End: Original strand, 55269 - 55394
Alignment:
Q  54 ctttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtg 153  Q
    |||||| || || ||||||||||||||||||| | |||||||||||||||||||||||| | ||||||| || | ||||| ||||   || ||||| |||    
T  55269 ctttagatgattttgagtgcctgaacatgtataagaatgattaggcaagtttttagattaaaattgaacatggggaagttaaaagtgagatttttgggtg 55368  T
Q  154 aaaaatgtcaaactcccgagagcacc 179  Q
    |||||||||||  |||||||||||||    
T  55369 aaaaatgtcaagttcccgagagcacc 55394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 124
Target Start/End: Original strand, 7684 - 7788
Alignment:
Q  20 aacatgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattg 119  Q
    |||||||||| |||||||||| ||||||||||||| |||| ||||| |||||| |||||||||| | |||||||||||| ||| |  |||| ||||||||    
T  7684 aacatgatttcgtagttttgatccttaagttgaaccttagatgtttttgagtgtctgaacatgtgtaataatgattaggaaagatcctagactgagattg 7783  T
Q  120 aacct 124  Q
    |||||    
T  7784 aacct 7788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 52; Significance: 8e-21; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 7105 - 7002
Alignment:
Q  22 catgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaa 121  Q
    |||||||| ||| |||||||| ||||||||||| |||| ||||| ||||||||| ||||||||| || ||||||||| ||| || |||||| ||||||||    
T  7105 catgatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattaagattgaa 7006  T
Q  122 cctg 125  Q
    ||||    
T  7005 cctg 7002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 14485 - 14382
Alignment:
Q  22 catgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaa 121  Q
    |||||||| ||| |||||||| ||||||||||| |||| ||||| ||||||||| ||||||||| || ||||||||| ||| || |||||| ||||||||    
T  14485 catgatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattaagattgaa 14386  T
Q  122 cctg 125  Q
    ||||    
T  14385 cctg 14382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 52; Significance: 8e-21; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 42 - 203
Target Start/End: Original strand, 25669 - 25831
Alignment:
Q  42 ccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattg-agattgaacctgagaaagtttaaagat 140  Q
    |||| |||||| |||||| ||||| |||||||  ||| |||||| ||||| ||||||||||||||||| ||| | |||||||||| || || ||||| ||    
T  25669 cctttagttgagctttagatgtttttgagtgctggaaaatgtataataattattaggcaagtttttagtttgaaaattgaacctgggagag-ttaaaaat 25767  T
Q  141 g-gaattttgagtgaaaaatgtcaaactcccgagagcaccttgtttcagttcgccatggcgagt 203  Q
    | || ||||| |||||||||||||| ||| ||||||||||  ||||| |||||||| |||||||    
T  25768 gagatttttgggtgaaaaatgtcaagctcgcgagagcacccagtttctgttcgccaaggcgagt 25831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 54 - 203
Target Start/End: Original strand, 16523 - 16673
Alignment:
Q  54 ctttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattg-agattgaacctgagaaagtttaaagatg-gaattttgag 151  Q
    |||||| ||||||| |||||  ||| |||||| ||||| ||||||||||||||||||||| | |||||||||| || || ||||| ||| || ||||| |    
T  16523 ctttagatgtttcttagtgctagaaaatgtataataattattaggcaagtttttagattgaaaattgaacctgggagag-ttaaatatgagatttttggg 16621  T
Q  152 tgaaaaatgtcaaactcccgagagcaccttgtttcagttcgccatggcgagt 203  Q
    |||||||||||||  || ||||||||||  ||| | |||||||| |||||||    
T  16622 tgaaaaatgtcaagttcgcgagagcacccagttcctgttcgccaaggcgagt 16673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2080 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold2080
Description:

Target: scaffold2080; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 203
Target Start/End: Original strand, 346 - 495
Alignment:
Q  54 ctttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatg-gaattttgagt 152  Q
    |||||| || || |||||||||||| |||||| | |||||||||||||||||| ||||||| ||||| | || | ||  ||||| ||| || ||||| ||    
T  346 ctttagatgattttgagtgcctgaatatgtataagaatgattaggcaagttttaagattgaaattgatcatggggaa-attaaaaatgagatttttgggt 444  T
Q  153 gaaaaatgtcaaactcccgagagcaccttgtttcagttcgccatggcgagt 203  Q
    ||||||||||||  |||||||||||||  |||||||||||||| |||||||    
T  445 gaaaaatgtcaagttcccgagagcacccagtttcagttcgccaaggcgagt 495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 145 - 214
Target Start/End: Complemental strand, 14775 - 14705
Alignment:
Q  145 ttttgagtgaaaaatgtcaaa-ctcccgagagcaccttgtttcagttcgccatggcgagttgtgagttcgc 214  Q
    ||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||| ||||||||||    
T  14775 ttttgagtgaaaaatgtcaaaactcccgagagcaccctttttcagttcgccatggcgagtagtgagttcgc 14705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 67 - 203
Target Start/End: Original strand, 17785 - 17921
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaatttt-gagtgaaaaatgtcaaa 165  Q
    ||||||||| ||||||| | | ||||||||||||| |||||||||||| ||||||| || | ||| ||||| |||| ||||| | ||||||||||||||     
T  17785 tgagtgccttaacatgtttaagaatgattaggcaattttttagattgaaattgaacatggggaag-ttaaaaatgggattttcgggtgaaaaatgtcaag 17883  T
Q  166 ctcccgagagcaccttgtttcagttcgccatggcgagt 203  Q
     |||||||||| ||| ||||| |||||||| |||||||    
T  17884 ttcccgagagctcctagtttctgttcgccaaggcgagt 17921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 123
Target Start/End: Original strand, 5751 - 5852
Alignment:
Q  22 catgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaa 121  Q
    |||||||| |||| ||||||| ||||||||||  |||| ||||| ||||| ||||||||||||| |||||||||||| ||  || |||||||||||||||    
T  5751 catgatttcgtagatttgacctttaagttgaatcttagatgtttttgagtacctgaacatgtataataatgattaggaaaaattgtagattgagattgaa 5850  T
Q  122 cc 123  Q
    ||    
T  5851 cc 5852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 175
Target Start/End: Original strand, 4318 - 4423
Alignment:
Q  70 gtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactcc 169  Q
    |||||| || |||||  ||||||||||||||| |||||||||| |||||||||||| ||||||||||| ||| | ||||  ||||||||||||||| | |    
T  4318 gtgccttaatatgtacaataatgattaggcaaatttttagattaagattgaacctgggaaagtttaaaaatgaattttttggtgaaaaatgtcaaattac 4417  T
Q  170 cgagag 175  Q
    ||||||    
T  4418 cgagag 4423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0780 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0780
Description:

Target: scaffold0780; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 67 - 179
Target Start/End: Original strand, 2946 - 3058
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaac 166  Q
    ||||||||| || || ||| |||||||||||||||||||||||||||||||||||| || | ||||| |||   ||| |||||  |||||||||||||      
T  2946 tgagtgccttaatatatataataatgattaggcaagtttttagattgagattgaacatggggaagttaaaaatgggatttttggatgaaaaatgtcaagt 3045  T
Q  167 tcccgagagcacc 179  Q
    |||||||||||||    
T  3046 tcccgagagcacc 3058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 125
Target Start/End: Original strand, 15459 - 15562
Alignment:
Q  22 catgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaa 121  Q
    |||||||| ||| |||| ||  ||||||||||| |||| ||||| ||||||||| ||||||||| || ||||||||| ||| || |||||||||||||||    
T  15459 catgatttcgtaattttaacttttaagttgaaccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattgagattgaa 15558  T
Q  122 cctg 125  Q
    ||||    
T  15559 cctg 15562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 179953 - 179904
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    |||||||||| ||||| ||||  |||||||||||| ||||||||||||||    
T  179953 tgtaacgcccacttttaattaattaattatttaattgagtctagacgagt 179904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0750 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0750
Description:

Target: scaffold0750; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 41 - 179
Target Start/End: Complemental strand, 4145 - 4007
Alignment:
Q  41 cccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagat 140  Q
    ||||| ||| || |||||| ||||| |||||||  ||| |||||| ||||| |||||||||||||||||||||| ||||||| || | ||||  |||       
T  4145 ccctttagtcgagctttagatgtttttgagtgctggaatatgtataataataattaggcaagtttttagattgaaattgaacatggggaagtaaaaaatg 4046  T
Q  141 ggaattttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
    ||| ||||| ||||||||||||||| || ||||||||||    
T  4045 ggatttttgggtgaaaaatgtcaaattctcgagagcacc 4007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 67 - 177
Target Start/End: Complemental strand, 8684 - 8574
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaac 166  Q
    ||||||||| ||||||| | | |||||||||||||||||||||||||| ||||||| || | ||||| |||   ||| ||||| ||||||||||||||      
T  8684 tgagtgccttaacatgtttaagaatgattaggcaagtttttagattgaaattgaacatggggaagttaaaaatgggatttttgggtgaaaaatgtcaagt 8585  T
Q  167 tcccgagagca 177  Q
    |||||||||||    
T  8584 tcccgagagca 8574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 173
Target Start/End: Complemental strand, 2721 - 2615
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaac 166  Q
    ||||||||| ||||||| | | |||||||||||||||||||||||||| ||||||| || | ||||| |||   ||| ||||| ||||||||||||||      
T  2721 tgagtgccttaacatgtttaagaatgattaggcaagtttttagattgaaattgaacatggggaagttaaaaatgggatttttgggtgaaaaatgtcaagt 2622  T
Q  167 tcccgag 173  Q
    |||||||    
T  2621 tcccgag 2615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 175
Target Start/End: Original strand, 13977 - 14111
Alignment:
Q  42 ccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttag-attgagattgaacctgagaaagtttaaagat 140  Q
    |||||||||||| || || || || |||||||||||| || ||| ||| ||||||||||||||||||| ||||| |||||| ||| | | |||||||       
T  13977 ccttaagttgaaattaagatgattttgagtgcctgaatatatataatattgattaggcaagtttttagaattgaaattgaatctggggaggtttaaaata 14076  T
Q  141 ggaattttgagtgaaaaatgtcaaactcccgagag 175  Q
    ||| ||||| ||||||||||||||  |||||||||    
T  14077 ggatttttgggtgaaaaatgtcaagttcccgagag 14111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 4)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 214
Target Start/End: Original strand, 59043 - 59113
Alignment:
Q  145 ttttgagtgaaaaatgtc-aaactcccgagagcaccttgtttcagttcgccatggcgagttgtgagttcgc 214  Q
    |||||||||||||||||| |||||||| | |||||| | |||||||||||||||||||||||| |||||||    
T  59043 ttttgagtgaaaaatgtcgaaactccctaaagcaccctttttcagttcgccatggcgagttgttagttcgc 59113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 17392 - 17442
Alignment:
Q  127 gaaagtttaaagatggaattttgagtgaaaaatgtcaaactcccgagagca 177  Q
    ||||||||||| ||||| ||||| ||| ||||||||||| |||||||||||    
T  17392 gaaagtttaaaaatggatttttgggtggaaaatgtcaaattcccgagagca 17442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 17457 - 17506
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    |||||||| | ||| ||||||  |||||||||||||||||||||||||||    
T  17457 tgtaacgctcacttcttattaattaattatttaatcgagtctagacgagt 17506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 38507 - 38458
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    |||||| ||| ||||||||||  |||||||||||||| ||||||||||||    
T  38507 tgtaacacccactttttattaattaattatttaatcgtgtctagacgagt 38458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 2077 - 2178
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||||||| |||||||  || |||||||| |||| || || ||||||||||||||||| | |||||||||||| |||  | |||| |||||||||||||    
T  2077 gattttgtaattttgactgttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 2176  T
Q  125 ga 126  Q
    ||    
T  2177 ga 2178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 122
Target Start/End: Complemental strand, 9436 - 9356
Alignment:
Q  42 ccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    |||||||| || |||||| || || |||||||||||| |||||| | ||||||||| |||||||||||||||| |||||||    
T  9436 ccttaagtcgagctttagatgattttgagtgcctgaatatgtataagaatgattagacaagtttttagattgaaattgaac 9356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 32572 - 32472
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||||||| |||||||  || |||||| | |||| ||||| ||||||||||||||||| | |||||||||||| ||| ||  ||| |||||||||||||    
T  32572 gattttgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacct 32473  T
Q  125 g 125  Q
    |    
T  32472 g 32472  T

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Target: scaffold0810 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 125
Target Start/End: Complemental strand, 3420 - 3321
Alignment:
Q  26 attttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    |||| ||| |||||||  || |||||| | |||| ||||| ||||||||||||||||| | |||||||||||| ||| ||  ||||||||||||||||||    
T  3420 atttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaacctg 3321  T

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Target: scaffold0116 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 125
Target Start/End: Original strand, 43438 - 43516
Alignment:
Q  47 agttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    |||||||| |||| ||||| ||||||||||||||||| | || ||||||||  ||| || |||||||||||||||||||    
T  43438 agttgaaccttagatgtttttgagtgcctgaacatgtctaattatgattagaaaagattctagattgagattgaacctg 43516  T

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Target: scaffold0116; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 125
Target Start/End: Original strand, 47358 - 47436
Alignment:
Q  47 agttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    |||||||| |||| ||||| ||||||||||||||||| | || ||||||||  ||| || |||||||||||||||||||    
T  47358 agttgaaccttagatgtttttgagtgcctgaacatgtctaattatgattagaaaagattctagattgagattgaacctg 47436  T

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Target: scaffold0029 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 214 - 264
Target Start/End: Complemental strand, 14054 - 14004
Alignment:
Q  214 ctgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    ||||||||||| ||||||||||  |||||||||||||||||||||||||||    
T  14054 ctgtaacgcccactttttattaattaattatttaatcgagtctagacgagt 14004  T

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Target: scaffold0395 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 8160 - 8221
Alignment:
Q  61 tgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    ||||| |||| |||||||||||||  |||||||||||||||| ||||||| |||||||||||    
T  8160 tgtttatgagggcctgaacatgtacaataatgattaggcaaggttttagaatgagattgaac 8221  T

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Target: scaffold0395; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 125
Target Start/End: Original strand, 636 - 694
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    ||||||||||||||||| | |||||||||||| ||| || ||||  |||||||||||||    
T  636 tgagtgcctgaacatgtctaataatgattaggaaagattgtagaacgagattgaacctg 694  T

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Target: scaffold0293 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 18006 - 17953
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattga 120  Q
    |||||||||| |||||||| | |||||||||||||||||||||||||| |||||    
T  18006 tgagtgcctggacatgtataagaatgattaggcaagtttttagattgaaattga 17953  T

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Target: scaffold0175 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 126
Target Start/End: Complemental strand, 34609 - 34508
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||| ||| |||||||  || |||||||| |||| || || ||||||||||||||||| | |||||||||||| |||  | |||| |||||||||||||    
T  34609 gatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 34510  T
Q  125 ga 126  Q
    ||    
T  34509 ga 34508  T

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Target: scaffold0108 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 203
Target Start/End: Complemental strand, 3679 - 3543
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaatttt-gagtgaaaaatgtcaaa 165  Q
    ||||||||| ||||||  | | |||||||||||||||||||||||||| ||| ||| || | ||| ||||| |||| ||||| | ||||||||||||||     
T  3679 tgagtgccttaacatgcttaagaatgattaggcaagtttttagattgaaattaaacatggggaag-ttaaatatgggattttcgggtgaaaaatgtcaag 3581  T
Q  166 ctcccgagagcaccttgtttcagttcgccatggcgagt 203  Q
     |||||| ||||||  || || |||||||| |||||||    
T  3580 ttcccgaaagcacccagtgtctgttcgccaaggcgagt 3543  T

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Target: scaffold0555 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 22 - 110
Target Start/End: Original strand, 10197 - 10285
Alignment:
Q  22 catgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttaga 110  Q
    |||||||| ||| |||||||| || || ||||| |||| ||||| ||||||||||||||||| | |||||||||||  ||| |||||||    
T  10197 catgatttcgtaattttgacctttgagatgaaccttagatgtttttgagtgcctgaacatgtctaataatgattagtaaagattttaga 10285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 264
Target Start/End: Complemental strand, 1884 - 1834
Alignment:
Q  214 ctgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    ||||||||||| ||||| ||||  |||||||||||| ||||||||||||||    
T  1884 ctgtaacgcccacttttaattaattaattatttaattgagtctagacgagt 1834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 70 - 202
Target Start/End: Complemental strand, 10649 - 10517
Alignment:
Q  70 gtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactcc 169  Q
    ||||||||||| |||| | |||||||||||||||| ||||||||| ||||||| |  | ||||| |||   ||| ||||| || |||||||||||  |||    
T  10649 gtgcctgaacacgtataagaatgattaggcaagttcttagattgaaattgaacatagggaagttaaaaatgggatttttgggttaaaaatgtcaagttcc 10550  T
Q  170 cgagagcaccttgtttcagttcgccatggcgag 202  Q
     |||||||||  ||||| |||| ||| ||||||    
T  10549 tgagagcacccagtttctgttctccaaggcgag 10517  T

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Target: scaffold0207 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 61 - 125
Target Start/End: Original strand, 2312 - 2376
Alignment:
Q  61 tgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    ||||| ||||||||||||||||| | |||||||||||| ||| ||  ||||||||||||||||||    
T  2312 tgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaacctg 2376  T

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Target: scaffold0028 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 133142 - 133042
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||| ||| |||||||  || |||||| | |||| ||||| ||||||||||||||||| | |||||||||||| ||| ||  ||| |||||||||||||    
T  133142 gatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacct 133043  T
Q  125 g 125  Q
    |    
T  133042 g 133042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 124
Target Start/End: Original strand, 692 - 791
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||| ||| |||||||  || |||||||| |||| || || ||||||||||||||||| | |||||||||||| |||  |||||  |||||||||||||    
T  692 gatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttaggatgagattgaacct 791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 179
Target Start/End: Complemental strand, 10958 - 10884
Alignment:
Q  105 tttagattgagattgaacctgagaaagtttaaagatggaattttgagtgaaaaatgtcaaactcccgagagcacc 179  Q
    |||||||||||||||||| |||| ||||| |||   ||| ||||| ||||||||||||||  |||||||||||||    
T  10958 tttagattgagattgaacatgaggaagttaaaaatgggatttttgggtgaaaaatgtcaagttcccgagagcacc 10884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 125
Target Start/End: Original strand, 16273 - 16331
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    ||||||||||||||||| | |||||||||||| |||  |||||| ||||||||||||||    
T  16273 tgagtgcctgaacatgtctaataatgattaggaaagaatttagaatgagattgaacctg 16331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 122
Target Start/End: Complemental strand, 97552 - 97474
Alignment:
Q  44 ttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    |||||| || |||||| || || ||| |||||||| |||||  ||||||||||||||| |||||| |||||||||||||    
T  97552 ttaagtcgagctttagatgattttgaatgcctgaatatgtacaataatgattaggcaaatttttatattgagattgaac 97474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 122
Target Start/End: Complemental strand, 106830 - 106752
Alignment:
Q  44 ttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    |||||| || |||||| || || ||| |||||||| |||||  ||||||||||||||| |||||| |||||||||||||    
T  106830 ttaagtcgagctttagatgattttgaatgcctgaatatgtacaataatgattaggcaaatttttatattgagattgaac 106752  T

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Target: scaffold0351 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 16757 - 16684
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattagg 98  Q
    ||||| ||| |||||||  ||||||||||| |||| || || ||||||||||||||||| | ||||||||||||    
T  16757 gatttcgtacttttgacttttaagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattagg 16684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 122
Target Start/End: Complemental strand, 6082 - 5985
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaac 122  Q
    ||||| ||| |||||||  || |||||| | |||| ||||| |||||||||||||| || | |||||||||||| ||| ||  |||||||||||||||    
T  6082 gatttcgtaattttgactttttagttgatccttagatgtttttgagtgcctgaacaggtctaataatgattaggaaagattggagattgagattgaac 5985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1243 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1243
Description:

Target: scaffold1243; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 177
Target Start/End: Original strand, 554 - 586
Alignment:
Q  145 ttttgagtgaaaaatgtcaaactcccgagagca 177  Q
    |||||||||||||||||||||||||||||||||    
T  554 ttttgagtgaaaaatgtcaaactcccgagagca 586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 13973 - 13873
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||| ||| |||||||  || |||||||| |||| || || ||||||||||||||||| | |||||||||||| |||  | |||  |||||||||||||    
T  13973 gatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaggatgtagcatgagattgaacct 13874  T
Q  125 g 125  Q
    |    
T  13873 g 13873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 18056 - 17969
Alignment:
Q  89 aatgattaggcaagtttttagattgagattgaacctgaga-aagtttaaagatggaattttgagtgaaaaatgtcaaactcccgagagc 176  Q
    |||||||||||||||||||||||| |  |||  | | ||| |||||||||   ||| ||||||||||||||||||||||||||||||||    
T  18056 aatgattaggcaagtttttagattaaatttgggcat-agagaagtttaaattgggatttttgagtgaaaaatgtcaaactcccgagagc 17969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 39248 - 39148
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||| ||| |||||||  | ||||||| | |||| || || ||||||||||||||||| | |||||||||||| |||  | |||| |||||||||||||    
T  39248 gatttcgtaattttgactttgaagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 39149  T
Q  125 g 125  Q
    |    
T  39148 g 39148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 19755 - 19655
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||||||| |||||||   | |||||| | |||| ||||| ||||||||||||||||| | |||||||||||| | | ||  ||| |||||||||||||    
T  19755 gattttgtaattttgacttctgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaggattggagaatgagattgaacct 19656  T
Q  125 g 125  Q
    |    
T  19655 g 19655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 177
Target Start/End: Original strand, 53075 - 53107
Alignment:
Q  145 ttttgagtgaaaaatgtcaaactcccgagagca 177  Q
    |||||||||||||||||||||||||||||||||    
T  53075 ttttgagtgaaaaatgtcaaactcccgagagca 53107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 176
Target Start/End: Complemental strand, 4294 - 4263
Alignment:
Q  145 ttttgagtgaaaaatgtcaaactcccgagagc 176  Q
    ||||||||||||||||||||||||||||||||    
T  4294 ttttgagtgaaaaatgtcaaactcccgagagc 4263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 107
Target Start/End: Complemental strand, 4378 - 4338
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagttttt 107  Q
    ||||||||| ||||||||| | |||||||||||||||||||    
T  4378 tgagtgccttaacatgtataagaatgattaggcaagttttt 4338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 176
Target Start/End: Complemental strand, 3885 - 3854
Alignment:
Q  145 ttttgagtgaaaaatgtcaaactcccgagagc 176  Q
    ||||||||||||||||||||||||||||||||    
T  3885 ttttgagtgaaaaatgtcaaactcccgagagc 3854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 9067 - 9122
Alignment:
Q  22 catgattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctga 77  Q
    |||||||| |||| ||||||| ||||||||||| |||| ||||| |||||||||||    
T  9067 catgatttcgtagatttgacctttaagttgaaccttagatgtttttgagtgcctga 9122  T

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Target: scaffold0211 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 124
Target Start/End: Original strand, 28441 - 28540
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||| ||| |||||||  || |||||| | |||| || || ||||||||||||||||| | |||||||||||| ||| ||  ||| |||||||||||||    
T  28441 gatttcgtacttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacct 28540  T

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Target: scaffold0088 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 21379 - 21308
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgatta 96  Q
    ||||||||| |||||||  || |||||||| |||| ||||| | ||||||||||||||| | ||||||||||    
T  21379 gattttgtaattttgacttttgagttgaaccttagatgttttttagtgcctgaacatgtctaataatgatta 21308  T

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Target: scaffold0054 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 77 - 120
Target Start/End: Original strand, 75456 - 75499
Alignment:
Q  77 aacatgtatgataatgattaggcaagtttttagattgagattga 120  Q
    ||||||||| | |||||||||||||||||||||||||| |||||    
T  75456 aacatgtataagaatgattaggcaagtttttagattgaaattga 75499  T

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Target: scaffold0042 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 176
Target Start/End: Complemental strand, 28889 - 28858
Alignment:
Q  145 ttttgagtgaaaaatgtcaaactcccgagagc 176  Q
    ||||||||||||||||||||||||||||||||    
T  28889 ttttgagtgaaaaatgtcaaactcccgagagc 28858  T

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Target: scaffold0023 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 62 - 125
Target Start/End: Complemental strand, 101846 - 101783
Alignment:
Q  62 gtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    |||| ||||||||||||||||| | |||||||||||| ||| ||  ||| ||||||||||||||    
T  101846 gtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctg 101783  T

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Target: scaffold0876 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 125
Target Start/End: Original strand, 2739 - 2817
Alignment:
Q  47 agttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    |||||||| |||| || || ||||||||||||||||| | |||||||||||| |||  | |||  ||||||||||||||    
T  2739 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 2817  T

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Target: scaffold0839 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 125
Target Start/End: Original strand, 1751 - 1809
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    ||||||||||||||||| | |||||||||||| |||  | |||| ||||||||||||||    
T  1751 tgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 1809  T

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Target: scaffold0647 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 125
Target Start/End: Original strand, 5795 - 5853
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    ||||||||||||||||| | |||||||||||| ||| || |||  ||||||||||||||    
T  5795 tgagtgcctgaacatgtctaataatgattaggaaagattgtaggatgagattgaacctg 5853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 20603 - 20653
Alignment:
Q  215 tgtaacgcccgctttttattacgt-aattatttaatcgagtctagacgagt 264  Q
    |||||||||| ||||||||||  | ||||||||||||||||||||||||||    
T  20603 tgtaacgcccactttttattaaattaattatttaatcgagtctagacgagt 20653  T

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Target: scaffold0210; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 28495 - 28545
Alignment:
Q  215 tgtaacgcccgctttttattacgt-aattatttaatcgagtctagacgagt 264  Q
    |||||||||| ||||||||||  | ||||||||||||||||||||||||||    
T  28495 tgtaacgcccactttttattaaattaattatttaatcgagtctagacgagt 28545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 29120 - 29178
Alignment:
Q  145 ttttgagtgaaaaatgtcaaactcccgagagcaccttgtttcagttcgccatggcgagt 203  Q
    ||||| ||||||||||||||  |||||||||||||  |||| ||||||||| |||||||    
T  29120 ttttgggtgaaaaatgtcaagttcccgagagcacccagttttagttcgccaaggcgagt 29178  T

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Target: scaffold0167 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 264
Target Start/End: Original strand, 35199 - 35249
Alignment:
Q  214 ctgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    ||||||||||| ||||| ||||  |||||||||||| ||||||||||||||    
T  35199 ctgtaacgcccacttttaattaattaattatttaattgagtctagacgagt 35249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 125
Target Start/End: Complemental strand, 17227 - 17169
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    ||||||||||||||||| | |||||||||||| |||  | |||| ||||||||||||||    
T  17227 tgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctg 17169  T

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Target: scaffold0056 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 125
Target Start/End: Original strand, 16889 - 16947
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    ||||||||||||||||| | |||||||||||| |||  | |||| ||||||||||||||    
T  16889 tgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 16947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 78994 - 79094
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||||||| || ||||  || |||||||| |||| || || ||||||| ||||||||| | |||||||||||| | |  | |||| |||||||||||||    
T  78994 gattttgtaattctgacttttgagttgaaccttagatgcttttgagtgcatgaacatgtttaataatgattaggaaggaatgtagaatgagattgaacct 79093  T
Q  125 g 125  Q
    |    
T  79094 g 79094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 264
Target Start/End: Original strand, 45571 - 45621
Alignment:
Q  214 ctgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    ||||||||||| |||||  |||  |||||||||||||||||||||||||||    
T  45571 ctgtaacgcccacttttatttaattaattatttaatcgagtctagacgagt 45621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 112
Target Start/End: Original strand, 1625 - 1670
Alignment:
Q  67 tgagtgcctgaacatgtatgataatgattaggcaagtttttagatt 112  Q
    ||||||||| || |||||||| ||||||||| ||||||||||||||    
T  1625 tgagtgccttaatatgtatgagaatgattagacaagtttttagatt 1670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0757 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0757
Description:

Target: scaffold0757; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 6131 - 6180
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    |||||||||| ||||| ||||  |||||||||||||||||||| ||||||    
T  6131 tgtaacgcccacttttgattaattaattatttaatcgagtctatacgagt 6180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 1466 - 1417
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    |||||||||| |||||  ||| ||||||||||||| ||||||||||||||    
T  1466 tgtaacgcccacttttatttaagtaattatttaattgagtctagacgagt 1417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 13240 - 13313
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattagg 98  Q
    ||||| ||| |||||||  || |||||||| |||| || || ||||||||||||||||| | ||||||||||||    
T  13240 gatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattagg 13313  T

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Target: scaffold0358 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 414 - 341
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattagg 98  Q
    ||||| ||| |||||||  || |||||||| |||| || || ||||||||||||||||| | ||||||||||||    
T  414 gatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattagg 341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 5190 - 5117
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattagg 98  Q
    ||||| ||| |||||||  || |||||||| |||| || || ||||||||||||||||| | ||||||||||||    
T  5190 gatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattagg 5117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 424 - 473
Alignment:
Q  129 aagtttaaagatggaatttt-gagtgaaaaatgtcaaactcccgagagca 177  Q
    ||||||||| |||| ||||| |||||||||||||||||||| ||||||||    
T  424 aagtttaaaaatgggatttttgagtgaaaaatgtcaaactctcgagagca 473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 9652 - 9701
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    |||||||||| ||||| ||||  ||||||||||||| |||||||||||||    
T  9652 tgtaacgcccacttttaattaattaattatttaatccagtctagacgagt 9701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 3320 - 3271
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    |||||||||| ||||||||||  |||||||||||| ||||||||| ||||    
T  3320 tgtaacgcccactttttattaattaattatttaattgagtctagatgagt 3271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 107
Target Start/End: Complemental strand, 30702 - 30649
Alignment:
Q  54 ctttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagttttt 107  Q
    |||||| || || ||||||||| ||||||||||| ||||||||| |||||||||    
T  30702 ctttagatggttttgagtgccttaacatgtatgagaatgattagacaagttttt 30649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 7773 - 7822
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    |||||||||| ||||| ||||  |||||||||||||||||||||| ||||    
T  7773 tgtaacgcccacttttaattaattaattatttaatcgagtctagatgagt 7822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 64601 - 64650
Alignment:
Q  215 tgtaacgcccgctttttattacgtaattatttaatcgagtctagacgagt 264  Q
    |||||||||| ||||| ||||  |||||||||||| ||||||||||||||    
T  64601 tgtaacgcccacttttaattaattaattatttaattgagtctagacgagt 64650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 65426 - 65479
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaa 78  Q
    |||||||||||||||||  || |||||||| |||| ||||| ||||||||||||    
T  65426 gattttgtagttttgacttttgagttgaaccttagatgtttttgagtgcctgaa 65479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 4774 - 4874
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||| ||| |||||||  || |||||||| |||| ||  | ||||||||||||||||| | |||||||||||| |||  | |||  |||||||||||||    
T  4774 gatttcgtatttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 4873  T
Q  125 g 125  Q
    |    
T  4874 g 4874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 125
Target Start/End: Complemental strand, 357 - 293
Alignment:
Q  61 tgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    ||||| ||||||||||||||||| | |||||||||||| |||  | |||  ||||||||||||||    
T  357 tgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 695 - 795
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||| ||| |||||||  || |||||||| |||| || || |||||||||||| |||| | |||||||||||| |||  | |||  |||||||||||||    
T  695 gatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtaggatgagattgaacct 794  T
Q  125 g 125  Q
    |    
T  795 g 795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 125
Target Start/End: Original strand, 10093 - 10169
Alignment:
Q  49 ttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 125  Q
    |||||| |||| || || ||||||||||||||||| | |||||||||||| |||  | |||  ||||||||||||||    
T  10093 ttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 10169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 5326 - 5226
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||||||| |||||||  || |||||||| |||| || || ||||||| |||| |||| | |||||||||||| |||  | |||  |||||||||||||    
T  5326 gattttgtaattttgacttttgagttgaaccttagatgcttttgagtgcatgaagatgtctaataatgattaggaaagaatgtaggatgagattgaacct 5227  T
Q  125 g 125  Q
    |    
T  5226 g 5226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 45421 - 45521
Alignment:
Q  25 gattttgtagttttgacccttaagttgaactttagttgtttctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 124  Q
    ||||||||| |||| ||  || |||||| | |||| ||||| |||||||||||| |||| | |||||||||||| ||| ||   || |||||||||||||    
T  45421 gattttgtaatttttacttttgagttgatccttagatgtttttgagtgcctgaatatgtctaataatgattaggaaagattggggaatgagattgaacct 45520  T
Q  125 g 125  Q
    |    
T  45521 g 45521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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