View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0754_low_37 (Length: 281)
Name: NF0754_low_37
Description: NF0754
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0754_low_37 |
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Alignment Details
Target: chr4 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 52 - 236
Target Start/End: Original strand, 7684528 - 7684712
Alignment:
| Q |
52 |
catcatcagccgctgcaaccacaacaaaaccacgatcgcaagacaccaaagcaacgcagtttaacaccagccacatattgatatccaggactccaacaac |
151 |
Q |
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| T |
7684528 |
catcaccagccgctgcaaccacaacaaaaccacgatcgcaagacaccaaagcaacgcagtttaacaccagccacatattgatatccaggactccaacaac |
7684627 |
T |
|
| Q |
152 |
ctcccttaagcgaaaagcaccaaggatgataataagagactgcaccatttttattcaaacattaataacgccaagacacgcccta |
236 |
Q |
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||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7684628 |
ctcccttaagcgaaaagcaccaacgatgataataagagactgcaccatttttattcaaacattaataacgccaagacacgcccta |
7684712 |
T |
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