View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0754_low_39 (Length: 274)
Name: NF0754_low_39
Description: NF0754
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0754_low_39 |
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Alignment Details
Target: chr3 (Bit Score: 178; Significance: 4e-96; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 44 - 229
Target Start/End: Original strand, 29280509 - 29280694
Alignment:
| Q |
44 |
acatcatcaaccttttcattctcaccatctacaccttttcttttttcttcttccgatccacgatcaccaaaaccagcaccattaccgtcctctttaacag |
143 |
Q |
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| T |
29280509 |
acatcatcaaccttttcattctcaccatctacaccttttcttttttcttcttccgatccacaatcaccaaaaccagcaccattaccgtcctctttaacag |
29280608 |
T |
|
| Q |
144 |
acaaaaccaacgacttcatcggaatgataaataacctaaccaaagtctcatgaggcaaagacatcagcatctgttcccattccttc |
229 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
29280609 |
acaaaaccaacgacttcatcggaatgataaataacctaaccaaagtctcatgaggcaaagacatcagcatctgttcacattccttc |
29280694 |
T |
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