View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0755_high_11 (Length: 445)
Name: NF0755_high_11
Description: NF0755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0755_high_11 |
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Alignment Details
Target: chr8 (Bit Score: 328; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 59 - 434
Target Start/End: Complemental strand, 26449635 - 26449260
Alignment:
| Q |
59 |
tcagaatttacatcatcttctgcaatctaatgtggatacctacatcaaagattcaaattggaatgttcctcaagcttctttgcctgcatatcctgctttg |
158 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||| |
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| T |
26449635 |
tcagaatttacatcatcttctgcaatctaatgtggatacctacatcaaagattcaaattggaatgttcctcaagcttttttggttgcatattctgctttg |
26449536 |
T |
|
| Q |
159 |
cagcagaaactattgttgactactatacctattttccctaaagaagataaactaatatagaaagcctctcatgatggaaatctagcttttaaagacgcat |
258 |
Q |
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|||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |
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| T |
26449535 |
gagcaaaaactattgatgactactatacctattgtccctaaagaagataaactaatatggaaagcctctcatgatggaaatttagcttttaaagacgcat |
26449436 |
T |
|
| Q |
259 |
atctcttcctgacttccaatcagcctcagaacatcagttgggccaaagtcatttggcacattgctatccctccttctaagtccgtgcttgtttggagact |
358 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
26449435 |
atctcttcctgacttccaatcagcctcagaacatcagttgggccaaagtcatttggcacattgctatccctccttctaagtccttgcttgtttggagact |
26449336 |
T |
|
| Q |
359 |
gttgcataacaagcttcctacagatgataacctctctcttagaggctttcatactacatccatttgcaatctctgt |
434 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
26449335 |
gttgcataacaagcttcctacagatgataacctctctcttagaggctgtcatactacatccatttgcaatctctgt |
26449260 |
T |
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