View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0755_high_56 (Length: 256)

Name: NF0755_high_56
Description: NF0755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0755_high_56
NF0755_high_56
[»] scaffold0810 (1 HSPs)
scaffold0810 (8-246)||(3196-3435)
[»] chr4 (60 HSPs)
chr4 (1-232)||(39705920-39706151)
chr4 (1-246)||(8846631-8846878)
chr4 (9-232)||(15099615-15099839)
chr4 (1-246)||(12774256-12774501)
chr4 (1-221)||(15190574-15190795)
chr4 (60-232)||(13844855-13845028)
chr4 (2-231)||(15464562-15464791)
chr4 (73-232)||(43198220-43198380)
chr4 (8-189)||(52242868-52243048)
chr4 (2-232)||(24029000-24029230)
chr4 (8-232)||(44928555-44928778)
chr4 (128-229)||(14052948-14053049)
chr4 (128-232)||(3097017-3097121)
chr4 (128-232)||(7089251-7089355)
chr4 (128-232)||(12903131-12903234)
chr4 (28-246)||(21814921-21815138)
chr4 (28-246)||(21815250-21815467)
chr4 (28-246)||(21818343-21818560)
chr4 (154-232)||(15552224-15552302)
chr4 (154-232)||(16239624-16239702)
chr4 (129-226)||(16597031-16597128)
chr4 (60-246)||(44102526-44102712)
chr4 (129-246)||(6190819-6190936)
chr4 (135-232)||(14039041-14039138)
chr4 (60-232)||(15091212-15091386)
chr4 (8-232)||(22633845-22634069)
chr4 (156-222)||(17047726-17047792)
chr4 (2-232)||(20156922-20157152)
chr4 (2-232)||(13812441-13812671)
chr4 (158-232)||(7799112-7799186)
chr4 (154-232)||(44053240-44053318)
chr4 (9-98)||(3332151-3332240)
chr4 (64-232)||(16377154-16377323)
chr4 (124-232)||(22636815-22636923)
chr4 (135-210)||(15868289-15868364)
chr4 (161-222)||(44676047-44676108)
chr4 (60-98)||(13616-13654)
chr4 (184-222)||(13569950-13569988)
chr4 (184-222)||(15094211-15094249)
chr4 (184-222)||(15121446-15121484)
chr4 (184-226)||(16348331-16348373)
chr4 (154-192)||(17046727-17046765)
chr4 (184-222)||(23843917-23843955)
chr4 (135-232)||(13405-13502)
chr4 (60-100)||(7089192-7089232)
chr4 (60-100)||(17047838-17047878)
chr4 (197-232)||(17053485-17053520)
chr4 (184-222)||(12570459-12570497)
chr4 (184-222)||(16356596-16356634)
chr4 (186-232)||(27534441-27534487)
chr4 (160-210)||(32851868-32851918)
chr4 (61-102)||(23374123-23374164)
chr4 (60-100)||(3096958-3096998)
chr4 (186-222)||(3413212-3413248)
chr4 (60-100)||(7799012-7799052)
chr4 (186-230)||(11250207-11250251)
chr4 (60-100)||(12903072-12903112)
chr4 (186-230)||(16351494-16351538)
chr4 (186-222)||(18602399-18602435)
chr4 (186-222)||(18608993-18609029)
[»] chr8 (75 HSPs)
chr8 (3-246)||(21673964-21674208)
chr8 (1-232)||(38854883-38855114)
chr8 (1-246)||(23760458-23760703)
chr8 (1-243)||(26355319-26355562)
chr8 (13-232)||(6520638-6520857)
chr8 (60-232)||(19801059-19801232)
chr8 (12-246)||(39834100-39834335)
chr8 (60-232)||(6759572-6759746)
chr8 (40-246)||(41598480-41598687)
chr8 (154-246)||(7373160-7373252)
chr8 (135-232)||(5865909-5866006)
chr8 (1-133)||(21285856-21285988)
chr8 (135-232)||(21491384-21491481)
chr8 (128-232)||(45130663-45130767)
chr8 (129-232)||(18878869-18878972)
chr8 (60-232)||(23406696-23406870)
chr8 (154-232)||(16091973-16092051)
chr8 (154-232)||(21918642-21918720)
chr8 (154-232)||(22627146-22627224)
chr8 (135-232)||(17141305-17141402)
chr8 (60-232)||(20536523-20536697)
chr8 (129-232)||(28648676-28648779)
chr8 (155-232)||(31971656-31971733)
chr8 (156-232)||(18818042-18818118)
chr8 (129-232)||(21255605-21255708)
chr8 (154-232)||(16199290-16199368)
chr8 (154-232)||(21249792-21249870)
chr8 (154-222)||(23648964-23649032)
chr8 (158-232)||(21923560-21923634)
chr8 (128-222)||(25362793-25362887)
chr8 (134-232)||(21414859-21414957)
chr8 (135-232)||(20499052-20499149)
chr8 (60-232)||(22875381-22875554)
chr8 (184-231)||(16409889-16409936)
chr8 (184-231)||(16860971-16861018)
chr8 (161-232)||(21389085-21389156)
chr8 (161-222)||(19899510-19899571)
chr8 (184-231)||(16411903-16411950)
chr8 (1-96)||(21249640-21249734)
chr8 (184-226)||(15602656-15602698)
chr8 (184-226)||(15611108-15611150)
chr8 (184-222)||(21161758-21161796)
chr8 (184-222)||(21168364-21168402)
chr8 (184-222)||(30642934-30642972)
chr8 (161-222)||(17353580-17353641)
chr8 (161-222)||(19976860-19976921)
chr8 (161-222)||(19983508-19983569)
chr8 (60-100)||(21918766-21918806)
chr8 (135-206)||(17266574-17266645)
chr8 (184-231)||(20856059-20856106)
chr8 (60-99)||(37116665-37116704)
chr8 (184-222)||(377716-377754)
chr8 (59-97)||(2418642-2418680)
chr8 (160-210)||(13507663-13507713)
chr8 (160-210)||(13597195-13597245)
chr8 (184-222)||(16185166-16185204)
chr8 (184-222)||(20465682-20465720)
chr8 (174-232)||(21286652-21286710)
chr8 (160-222)||(22010322-22010384)
chr8 (60-98)||(22419182-22419220)
chr8 (184-222)||(24756159-24756197)
chr8 (11-96)||(5866045-5866129)
chr8 (60-97)||(21967336-21967373)
chr8 (60-97)||(21980061-21980098)
chr8 (60-97)||(21985044-21985081)
chr8 (63-100)||(25362906-25362943)
chr8 (60-97)||(44493455-44493492)
chr8 (60-96)||(17141230-17141266)
chr8 (186-222)||(18619894-18619930)
chr8 (60-100)||(18818175-18818215)
chr8 (161-217)||(21395630-21395686)
chr8 (43-95)||(21414997-21415049)
chr8 (161-217)||(21790123-21790179)
chr8 (186-222)||(22028973-22029009)
chr8 (63-95)||(24353344-24353376)
[»] chr3 (86 HSPs)
chr3 (1-232)||(15471182-15471413)
chr3 (1-243)||(16097587-16097830)
chr3 (1-232)||(14234748-14234979)
chr3 (1-246)||(12933928-12934174)
chr3 (1-232)||(1465041-1465273)
chr3 (1-242)||(32307926-32308167)
chr3 (3-246)||(9513168-9513413)
chr3 (3-246)||(9521143-9521388)
chr3 (1-246)||(49667702-49667947)
chr3 (62-246)||(49389262-49389446)
chr3 (1-246)||(1644301-1644546)
chr3 (1-246)||(12171735-12171968)
chr3 (1-210)||(324493-324702)
chr3 (1-246)||(16104038-16104283)
chr3 (60-232)||(17247918-17248091)
chr3 (8-232)||(53070331-53070553)
chr3 (9-232)||(2050833-2051053)
chr3 (129-232)||(14179708-14179811)
chr3 (8-193)||(52523398-52523582)
chr3 (1-232)||(13209960-13210191)
chr3 (2-232)||(12340011-12340241)
chr3 (60-232)||(40213353-40213526)
chr3 (156-232)||(12399608-12399684)
chr3 (128-232)||(20698079-20698183)
chr3 (60-232)||(11424395-11424568)
chr3 (129-232)||(18438920-18439023)
chr3 (2-246)||(42386671-42386914)
chr3 (154-232)||(14973265-14973343)
chr3 (154-232)||(17247152-17247230)
chr3 (2-232)||(14669019-14669249)
chr3 (2-223)||(14665864-14666085)
chr3 (2-223)||(14735377-14735598)
chr3 (60-232)||(25476017-25476190)
chr3 (129-232)||(26687273-26687376)
chr3 (129-222)||(14572974-14573067)
chr3 (154-232)||(30030239-30030317)
chr3 (154-222)||(4588457-4588525)
chr3 (129-232)||(14576465-14576568)
chr3 (129-232)||(17488243-17488346)
chr3 (129-232)||(17499725-17499828)
chr3 (154-232)||(43842589-43842667)
chr3 (161-232)||(15877461-15877532)
chr3 (154-232)||(12851996-12852074)
chr3 (154-232)||(16809800-16809874)
chr3 (184-231)||(17674209-17674256)
chr3 (131-210)||(23275129-23275208)
chr3 (160-226)||(323002-323068)
chr3 (158-232)||(23082993-23083067)
chr3 (1-99)||(37250932-37251029)
chr3 (60-100)||(14572904-14572944)
chr3 (184-231)||(3402600-3402647)
chr3 (159-210)||(22109929-22109980)
chr3 (184-222)||(321657-321695)
chr3 (184-222)||(12173223-12173261)
chr3 (184-226)||(12496692-12496734)
chr3 (184-226)||(15060729-15060771)
chr3 (184-222)||(17524817-17524855)
chr3 (184-226)||(18383556-18383598)
chr3 (60-97)||(606135-606172)
chr3 (156-193)||(13442687-13442724)
chr3 (58-95)||(23083132-23083169)
chr3 (186-230)||(1982456-1982500)
chr3 (2-50)||(4588602-4588650)
chr3 (138-210)||(14501594-14501666)
chr3 (199-231)||(19725546-19725578)
chr3 (197-229)||(23408882-23408914)
chr3 (184-231)||(11852008-11852055)
chr3 (60-99)||(22110116-22110155)
chr3 (184-222)||(3389600-3389638)
chr3 (184-222)||(11298172-11298210)
chr3 (179-233)||(12037585-12037639)
chr3 (184-222)||(14878148-14878186)
chr3 (184-226)||(15051953-15051995)
chr3 (184-226)||(16369845-16369887)
chr3 (184-222)||(26190652-26190690)
chr3 (129-210)||(605945-606026)
chr3 (197-230)||(16690646-16690679)
chr3 (197-230)||(16697219-16697252)
chr3 (60-97)||(16839439-16839476)
chr3 (186-222)||(3834090-3834126)
chr3 (186-230)||(11594785-11594829)
chr3 (60-100)||(14576598-14576638)
chr3 (60-100)||(20698202-20698242)
chr3 (138-210)||(23412827-23412899)
chr3 (60-100)||(26687202-26687242)
chr3 (138-210)||(45797638-45797710)
[»] scaffold0207 (1 HSPs)
scaffold0207 (1-246)||(2262-2507)
[»] chr1 (53 HSPs)
chr1 (1-246)||(22921485-22921731)
chr1 (1-246)||(52927599-52927844)
chr1 (1-243)||(22237887-22238129)
chr1 (1-246)||(33681266-33681512)
chr1 (9-231)||(20637115-20637339)
chr1 (1-246)||(20248534-20248780)
chr1 (8-232)||(35981319-35981543)
chr1 (60-246)||(21754352-21754538)
chr1 (8-232)||(28194080-28194305)
chr1 (118-246)||(43697735-43697863)
chr1 (128-232)||(22355817-22355921)
chr1 (128-232)||(22357503-22357607)
chr1 (154-232)||(27250372-27250450)
chr1 (60-232)||(433323-433496)
chr1 (157-232)||(21301170-21301245)
chr1 (129-232)||(22532655-22532758)
chr1 (129-232)||(34510166-34510269)
chr1 (154-232)||(38801034-38801112)
chr1 (154-231)||(20135598-20135675)
chr1 (128-232)||(20846862-20846966)
chr1 (1-93)||(49261598-49261690)
chr1 (135-225)||(20918993-20919083)
chr1 (128-226)||(21027054-21027152)
chr1 (156-232)||(22354204-22354280)
chr1 (179-232)||(21714983-21715036)
chr1 (161-232)||(22468329-22468400)
chr1 (8-99)||(26065205-26065295)
chr1 (60-232)||(50209846-50210018)
chr1 (2-98)||(16758911-16759005)
chr1 (184-231)||(3472560-3472607)
chr1 (158-232)||(20091106-20091180)
chr1 (184-233)||(8761265-8761314)
chr1 (160-231)||(18181755-18181826)
chr1 (184-226)||(22432422-22432464)
chr1 (184-222)||(22831021-22831059)
chr1 (184-222)||(42864854-42864892)
chr1 (135-232)||(16759118-16759215)
chr1 (161-222)||(21787685-21787746)
chr1 (61-98)||(21861335-21861372)
chr1 (11-98)||(20918870-20918956)
chr1 (8-92)||(35260852-35260935)
chr1 (60-100)||(38801157-38801197)
chr1 (135-222)||(21162120-21162207)
chr1 (184-226)||(21023076-21023118)
chr1 (62-100)||(22354338-22354376)
chr1 (186-231)||(17678232-17678277)
chr1 (159-232)||(21342564-21342637)
chr1 (159-232)||(21347429-21347502)
chr1 (135-232)||(21895864-21895961)
chr1 (60-100)||(21162081-21162121)
chr1 (186-222)||(23818953-23818989)
chr1 (67-99)||(41049809-41049841)
chr1 (186-222)||(45489397-45489433)
[»] chr7 (69 HSPs)
chr7 (1-246)||(47832066-47832311)
chr7 (1-246)||(68003-68249)
chr7 (1-246)||(18005905-18006144)
chr7 (1-232)||(16219348-16219579)
chr7 (8-246)||(44014438-44014677)
chr7 (9-232)||(16324272-16324495)
chr7 (1-246)||(9389313-9389559)
chr7 (1-246)||(810747-810993)
chr7 (1-210)||(22073174-22073383)
chr7 (2-193)||(12255462-12255652)
chr7 (8-246)||(17061578-17061815)
chr7 (8-245)||(12756336-12756571)
chr7 (1-182)||(16056586-16056767)
chr7 (2-193)||(2279789-2279979)
chr7 (135-232)||(28504933-28505030)
chr7 (154-232)||(11995690-11995768)
chr7 (128-232)||(16385890-16385994)
chr7 (129-232)||(38227866-38227969)
chr7 (60-232)||(15143668-15143842)
chr7 (154-232)||(40443788-40443866)
chr7 (60-246)||(44116821-44117007)
chr7 (129-232)||(15754519-15754622)
chr7 (154-232)||(12699243-12699321)
chr7 (154-232)||(27847476-27847554)
chr7 (2-232)||(9751182-9751412)
chr7 (129-232)||(3563996-3564099)
chr7 (129-232)||(9509575-9509678)
chr7 (154-232)||(2831938-2832016)
chr7 (2-232)||(39267278-39267508)
chr7 (129-232)||(18302564-18302667)
chr7 (63-212)||(21064814-21064964)
chr7 (154-232)||(34201194-34201272)
chr7 (128-232)||(26212370-26212474)
chr7 (179-232)||(18154469-18154522)
chr7 (160-231)||(2760542-2760613)
chr7 (160-231)||(3272202-3272273)
chr7 (179-232)||(19649117-19649170)
chr7 (161-232)||(24054884-24054955)
chr7 (161-222)||(10508725-10508786)
chr7 (161-222)||(11880668-11880729)
chr7 (197-232)||(14194731-14194766)
chr7 (60-98)||(9177431-9177469)
chr7 (184-222)||(9703705-9703743)
chr7 (184-222)||(12321385-12321423)
chr7 (2-51)||(2529866-2529915)
chr7 (1-50)||(15754702-15754751)
chr7 (138-210)||(2529631-2529703)
chr7 (60-100)||(26212311-26212351)
chr7 (11-98)||(11995796-11995882)
chr7 (8-99)||(15008263-15008353)
chr7 (186-225)||(42205530-42205569)
chr7 (135-201)||(9177252-9177318)
chr7 (184-222)||(12187452-12187490)
chr7 (184-226)||(14430317-14430359)
chr7 (184-222)||(17137706-17137744)
chr7 (60-98)||(18302495-18302533)
chr7 (135-200)||(14045216-14045281)
chr7 (135-200)||(14355246-14355311)
chr7 (11-96)||(28505069-28505153)
chr7 (186-222)||(8917842-8917878)
chr7 (60-100)||(9509504-9509544)
chr7 (186-222)||(13462177-13462213)
chr7 (60-96)||(15113260-15113296)
chr7 (184-220)||(15211867-15211903)
chr7 (186-222)||(15581108-15581144)
chr7 (186-222)||(15604926-15604962)
chr7 (186-222)||(18557387-18557423)
chr7 (60-100)||(38227796-38227836)
chr7 (60-100)||(40443704-40443744)
[»] scaffold0621 (2 HSPs)
scaffold0621 (1-246)||(6793-7039)
scaffold0621 (60-98)||(8786-8824)
[»] scaffold0138 (1 HSPs)
scaffold0138 (1-245)||(13198-13442)
[»] scaffold0556 (2 HSPs)
scaffold0556 (1-246)||(7068-7314)
scaffold0556 (40-232)||(8312-8505)
[»] chr2 (43 HSPs)
chr2 (31-232)||(25176129-25176331)
chr2 (1-246)||(22133835-22134079)
chr2 (2-231)||(23708252-23708479)
chr2 (1-193)||(28406236-28406429)
chr2 (128-232)||(23286235-23286339)
chr2 (63-232)||(23660341-23660511)
chr2 (128-232)||(23654042-23654146)
chr2 (60-232)||(298447-298620)
chr2 (154-232)||(28291934-28292012)
chr2 (60-246)||(32451547-32451735)
chr2 (156-231)||(37760-37835)
chr2 (129-232)||(27753961-27754064)
chr2 (129-231)||(22730866-22730968)
chr2 (154-232)||(22737812-22737890)
chr2 (60-232)||(22337431-22337604)
chr2 (128-232)||(20309479-20309583)
chr2 (135-213)||(23071614-23071692)
chr2 (60-232)||(23076757-23076929)
chr2 (1-99)||(23207537-23207634)
chr2 (30-99)||(20519957-20520026)
chr2 (179-232)||(23100863-23100916)
chr2 (184-222)||(22798769-22798807)
chr2 (179-229)||(23038468-23038518)
chr2 (184-226)||(25963356-25963398)
chr2 (184-222)||(45677798-45677836)
chr2 (161-218)||(22740607-22740664)
chr2 (161-218)||(22758362-22758419)
chr2 (161-222)||(24658055-24658116)
chr2 (185-222)||(40621851-40621888)
chr2 (184-231)||(22811568-22811615)
chr2 (184-231)||(24716175-24716222)
chr2 (60-95)||(31756233-31756268)
chr2 (184-226)||(21917955-21917997)
chr2 (131-201)||(23005193-23005263)
chr2 (184-226)||(37525102-37525144)
chr2 (46-99)||(22412900-22412953)
chr2 (60-97)||(23791592-23791629)
chr2 (60-100)||(37882-37922)
chr2 (60-96)||(23071731-23071767)
chr2 (60-100)||(23286176-23286216)
chr2 (186-230)||(24175227-24175271)
chr2 (186-230)||(24870307-24870351)
chr2 (186-222)||(27263667-27263703)
[»] scaffold0010 (2 HSPs)
scaffold0010 (1-246)||(130164-130410)
scaffold0010 (42-99)||(60479-60536)
[»] chr5 (59 HSPs)
chr5 (1-232)||(21329127-21329359)
chr5 (1-246)||(22959151-22959397)
chr5 (1-246)||(21565801-21566047)
chr5 (1-246)||(19669156-19669403)
chr5 (8-232)||(5888807-5889032)
chr5 (1-232)||(21741175-21741407)
chr5 (2-193)||(22144310-22144500)
chr5 (1-232)||(26011666-26011897)
chr5 (8-246)||(36154446-36154683)
chr5 (60-246)||(11580863-11581050)
chr5 (60-232)||(1096783-1096956)
chr5 (97-232)||(21498649-21498785)
chr5 (2-223)||(22119834-22120055)
chr5 (60-232)||(21985779-21985952)
chr5 (128-232)||(21292613-21292717)
chr5 (64-232)||(23390128-23390298)
chr5 (154-232)||(19660469-19660547)
chr5 (154-232)||(22075419-22075497)
chr5 (129-232)||(21871203-21871306)
chr5 (129-232)||(21875483-21875586)
chr5 (129-232)||(24529607-24529710)
chr5 (154-232)||(25421943-25422021)
chr5 (129-232)||(9078338-9078441)
chr5 (154-232)||(13095905-13095983)
chr5 (154-232)||(25431805-25431883)
chr5 (154-231)||(22107017-22107094)
chr5 (128-232)||(8286485-8286589)
chr5 (129-232)||(24493954-24494057)
chr5 (2-232)||(24766969-24767199)
chr5 (154-232)||(13025721-13025799)
chr5 (1-102)||(21501917-21502016)
chr5 (161-226)||(37724319-37724384)
chr5 (161-222)||(23201784-23201845)
chr5 (184-231)||(17918796-17918843)
chr5 (186-232)||(20910444-20910490)
chr5 (184-226)||(21366305-21366347)
chr5 (184-222)||(21887262-21887300)
chr5 (186-231)||(1858621-1858666)
chr5 (60-97)||(25744037-25744074)
chr5 (179-232)||(26704499-26704552)
chr5 (179-232)||(26974232-26974285)
chr5 (184-222)||(14079586-14079624)
chr5 (135-193)||(20026534-20026592)
chr5 (184-226)||(20805985-20806027)
chr5 (184-222)||(22032754-22032792)
chr5 (179-217)||(23500993-23501031)
chr5 (184-218)||(23512545-23512579)
chr5 (197-243)||(29916582-29916628)
chr5 (184-222)||(31342541-31342579)
chr5 (60-97)||(15796738-15796774)
chr5 (60-97)||(25421848-25421885)
chr5 (60-100)||(9078268-9078308)
chr5 (186-230)||(12028211-12028255)
chr5 (60-100)||(13095810-13095850)
chr5 (60-96)||(19660606-19660642)
chr5 (60-100)||(21292736-21292776)
chr5 (60-100)||(22075334-22075374)
chr5 (60-100)||(22107139-22107179)
chr5 (186-230)||(24222304-24222348)
[»] chr6 (60 HSPs)
chr6 (1-246)||(19652452-19652698)
chr6 (1-232)||(23019665-23019896)
chr6 (60-246)||(22080355-22080542)
chr6 (1-232)||(27332916-27333147)
chr6 (1-232)||(27393656-27393887)
chr6 (2-242)||(25644582-25644821)
chr6 (1-232)||(28496105-28496336)
chr6 (62-246)||(25956239-25956424)
chr6 (8-246)||(18456981-18457217)
chr6 (1-232)||(29808515-29808747)
chr6 (128-232)||(20637926-20638030)
chr6 (129-232)||(1561689-1561792)
chr6 (2-222)||(4667855-4668075)
chr6 (135-232)||(19303173-19303270)
chr6 (129-232)||(22779859-22779962)
chr6 (154-232)||(17287428-17287506)
chr6 (128-246)||(18821448-18821566)
chr6 (128-232)||(16920276-16920380)
chr6 (128-232)||(20360603-20360707)
chr6 (60-222)||(4185465-4185628)
chr6 (158-232)||(25611355-25611429)
chr6 (2-222)||(4674702-4674922)
chr6 (129-233)||(18409458-18409562)
chr6 (158-232)||(15894062-15894136)
chr6 (158-232)||(22334514-22334588)
chr6 (2-222)||(4189215-4189435)
chr6 (160-232)||(22831908-22831980)
chr6 (2-232)||(21939642-21939872)
chr6 (60-232)||(25628987-25629160)
chr6 (60-228)||(29060856-29061025)
chr6 (161-232)||(19863395-19863466)
chr6 (129-232)||(20594159-20594262)
chr6 (174-232)||(22439230-22439288)
chr6 (158-232)||(25603017-25603091)
chr6 (184-231)||(18180927-18180974)
chr6 (161-232)||(22432667-22432738)
chr6 (129-222)||(31155040-31155133)
chr6 (160-232)||(11185908-11185980)
chr6 (167-231)||(15041184-15041248)
chr6 (161-232)||(25641816-25641887)
chr6 (1-99)||(19668631-19668728)
chr6 (184-222)||(21739665-21739703)
chr6 (186-232)||(27415586-27415632)
chr6 (60-97)||(17106049-17106086)
chr6 (64-97)||(18177438-18177471)
chr6 (64-97)||(18204400-18204433)
chr6 (60-100)||(18821585-18821625)
chr6 (1-44)||(1561560-1561603)
chr6 (187-226)||(16523042-16523081)
chr6 (135-210)||(20109607-20109682)
chr6 (67-97)||(18199182-18199212)
chr6 (184-222)||(21834533-21834571)
chr6 (63-100)||(11185820-11185857)
chr6 (60-97)||(35008466-35008503)
chr6 (60-100)||(16830112-16830152)
chr6 (60-100)||(16920399-16920439)
chr6 (60-100)||(20360726-20360766)
chr6 (60-100)||(22831817-22831857)
chr6 (62-98)||(23527872-23527908)
chr6 (60-100)||(25611489-25611529)
[»] scaffold0333 (2 HSPs)
scaffold0333 (1-232)||(6870-7102)
scaffold0333 (1-232)||(14250-14482)
[»] scaffold1984 (1 HSPs)
scaffold1984 (1-246)||(387-633)
[»] scaffold0125 (1 HSPs)
scaffold0125 (1-246)||(45407-45654)
[»] scaffold0020 (2 HSPs)
scaffold0020 (1-232)||(15462-15694)
scaffold0020 (179-232)||(179085-179138)
[»] scaffold0102 (2 HSPs)
scaffold0102 (1-246)||(19523-19769)
scaffold0102 (185-232)||(48093-48140)
[»] scaffold0001 (2 HSPs)
scaffold0001 (1-246)||(160942-161188)
scaffold0001 (60-97)||(162867-162904)
[»] scaffold0530 (1 HSPs)
scaffold0530 (1-232)||(660-897)
[»] scaffold0211 (1 HSPs)
scaffold0211 (1-246)||(28427-28673)
[»] scaffold0150 (1 HSPs)
scaffold0150 (1-246)||(32340-32586)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-246)||(132910-133156)
[»] scaffold0243 (1 HSPs)
scaffold0243 (1-232)||(5754-5985)
[»] scaffold0034 (2 HSPs)
scaffold0034 (1-210)||(32794-33003)
scaffold0034 (129-246)||(51502-51619)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-232)||(10786-11017)
[»] scaffold0278 (2 HSPs)
scaffold0278 (118-243)||(5968-6093)
scaffold0278 (1-52)||(5901-5952)
[»] scaffold0628 (1 HSPs)
scaffold0628 (1-246)||(2421-2666)
[»] scaffold0021 (8 HSPs)
scaffold0021 (129-246)||(62947-63064)
scaffold0021 (154-232)||(124993-125071)
scaffold0021 (184-232)||(175205-175253)
scaffold0021 (135-206)||(135949-136020)
scaffold0021 (60-99)||(136132-136171)
scaffold0021 (135-206)||(144657-144728)
scaffold0021 (60-99)||(144840-144879)
scaffold0021 (60-100)||(124900-124940)
[»] scaffold0507 (1 HSPs)
scaffold0507 (9-232)||(7689-7912)
[»] scaffold1137 (1 HSPs)
scaffold1137 (8-244)||(1921-2158)
[»] scaffold0116 (2 HSPs)
scaffold0116 (60-212)||(43436-43589)
scaffold0116 (60-212)||(47356-47509)
[»] scaffold0023 (3 HSPs)
scaffold0023 (1-173)||(39863-40036)
scaffold0023 (63-246)||(101714-101897)
scaffold0023 (171-246)||(39627-39702)
[»] scaffold0142 (1 HSPs)
scaffold0142 (60-246)||(17096-17283)
[»] scaffold1842 (2 HSPs)
scaffold1842 (154-232)||(692-770)
scaffold1842 (60-100)||(815-855)
[»] scaffold0555 (3 HSPs)
scaffold0555 (152-246)||(10186-10280)
scaffold0555 (158-232)||(994-1068)
scaffold0555 (1-113)||(10292-10403)
[»] scaffold0389 (1 HSPs)
scaffold0389 (154-232)||(13240-13318)
[»] scaffold0358 (4 HSPs)
scaffold0358 (154-232)||(336-414)
scaffold0358 (154-232)||(5112-5190)
scaffold0358 (62-100)||(253-291)
scaffold0358 (62-100)||(5029-5067)
[»] scaffold0011 (4 HSPs)
scaffold0011 (154-232)||(167622-167700)
scaffold0011 (129-223)||(52298-52392)
scaffold0011 (60-100)||(52227-52267)
scaffold0011 (60-100)||(167745-167785)
[»] scaffold0175 (4 HSPs)
scaffold0175 (135-232)||(34512-34609)
scaffold0175 (154-232)||(13503-13581)
scaffold0175 (60-100)||(13407-13447)
scaffold0175 (60-96)||(34437-34473)
[»] scaffold0876 (1 HSPs)
scaffold0876 (129-232)||(2717-2820)
[»] scaffold0100 (1 HSPs)
scaffold0100 (129-232)||(20498-20601)
[»] scaffold0075 (3 HSPs)
scaffold0075 (1-232)||(7926-8157)
scaffold0075 (60-98)||(53314-53352)
scaffold0075 (135-232)||(53103-53200)
[»] scaffold0475 (1 HSPs)
scaffold0475 (2-222)||(9335-9555)
[»] scaffold0427 (1 HSPs)
scaffold0427 (155-232)||(13896-13973)
[»] scaffold0395 (2 HSPs)
scaffold0395 (151-232)||(594-675)
scaffold0395 (127-232)||(8124-8229)
[»] scaffold0218 (2 HSPs)
scaffold0218 (135-232)||(28912-29009)
scaffold0218 (1-99)||(7841-7938)
[»] scaffold0217 (1 HSPs)
scaffold0217 (60-232)||(16231-16405)
[»] scaffold0161 (2 HSPs)
scaffold0161 (135-232)||(2077-2174)
scaffold0161 (60-96)||(2213-2249)
[»] scaffold0120 (3 HSPs)
scaffold0120 (60-232)||(32591-32764)
scaffold0120 (60-232)||(46241-46414)
scaffold0120 (154-223)||(16498-16566)
[»] scaffold0031 (2 HSPs)
scaffold0031 (28-232)||(20058-20261)
scaffold0031 (179-232)||(65426-65479)
[»] scaffold0839 (1 HSPs)
scaffold0839 (8-223)||(1719-1932)
[»] scaffold0718 (1 HSPs)
scaffold0718 (128-232)||(4774-4878)
[»] scaffold0598 (2 HSPs)
scaffold0598 (128-232)||(695-799)
scaffold0598 (60-100)||(818-858)
[»] scaffold0503 (1 HSPs)
scaffold0503 (43-246)||(12228-12431)
[»] scaffold0456 (1 HSPs)
scaffold0456 (128-232)||(10069-10173)
[»] scaffold0403 (2 HSPs)
scaffold0403 (128-232)||(5222-5326)
scaffold0403 (60-100)||(5163-5203)
[»] scaffold0231 (1 HSPs)
scaffold0231 (154-246)||(23293-23385)
[»] scaffold0627 (1 HSPs)
scaffold0627 (129-232)||(290-393)
[»] scaffold0305 (2 HSPs)
scaffold0305 (129-232)||(20789-20892)
scaffold0305 (60-100)||(20718-20758)
[»] scaffold0228 (7 HSPs)
scaffold0228 (129-232)||(4894-4997)
scaffold0228 (129-232)||(12476-12579)
scaffold0228 (129-232)||(22428-22531)
scaffold0228 (184-222)||(18286-18324)
scaffold0228 (60-100)||(4823-4863)
scaffold0228 (60-100)||(12405-12445)
scaffold0228 (60-100)||(22357-22397)
[»] scaffold0145 (2 HSPs)
scaffold0145 (129-232)||(39145-39248)
scaffold0145 (60-100)||(39076-39116)
[»] scaffold0026 (4 HSPs)
scaffold0026 (129-232)||(40242-40345)
scaffold0026 (129-232)||(39563-39666)
scaffold0026 (135-188)||(59179-59232)
scaffold0026 (60-96)||(59271-59307)
[»] scaffold0016 (3 HSPs)
scaffold0016 (129-232)||(2237-2340)
scaffold0016 (2-222)||(207161-207381)
scaffold0016 (64-100)||(2170-2206)
[»] scaffold0351 (1 HSPs)
scaffold0351 (154-232)||(16679-16757)
[»] scaffold0113 (1 HSPs)
scaffold0113 (154-232)||(32464-32542)
[»] scaffold0088 (1 HSPs)
scaffold0088 (154-232)||(21301-21379)
[»] scaffold0292 (2 HSPs)
scaffold0292 (135-232)||(734-831)
scaffold0292 (60-232)||(3785-3959)
[»] scaffold0347 (1 HSPs)
scaffold0347 (3-232)||(288-516)
[»] scaffold0056 (4 HSPs)
scaffold0056 (124-232)||(78994-79102)
scaffold0056 (129-222)||(16857-16950)
scaffold0056 (184-231)||(13711-13758)
scaffold0056 (8-87)||(79107-79184)
[»] scaffold0357 (3 HSPs)
scaffold0357 (2-97)||(15866-15960)
scaffold0357 (2-95)||(13390-13482)
scaffold0357 (131-206)||(3158-3233)
[»] scaffold0352 (1 HSPs)
scaffold0352 (154-232)||(17640-17718)
[»] scaffold0151 (1 HSPs)
scaffold0151 (154-232)||(10555-10633)
[»] scaffold0647 (1 HSPs)
scaffold0647 (151-232)||(5753-5834)
[»] scaffold0261 (4 HSPs)
scaffold0261 (135-232)||(16050-16147)
scaffold0261 (161-232)||(1755-1826)
scaffold0261 (11-96)||(15927-16011)
scaffold0261 (138-210)||(17920-17992)
[»] scaffold0130 (1 HSPs)
scaffold0130 (135-232)||(28928-29025)
[»] scaffold0122 (3 HSPs)
scaffold0122 (154-222)||(25707-25775)
scaffold0122 (61-232)||(33126-33299)
scaffold0122 (60-100)||(25830-25870)
[»] scaffold0042 (2 HSPs)
scaffold0042 (156-232)||(23934-24010)
scaffold0042 (184-222)||(34553-34591)
[»] scaffold0266 (1 HSPs)
scaffold0266 (129-232)||(18590-18693)
[»] scaffold0221 (2 HSPs)
scaffold0221 (129-232)||(12441-12544)
scaffold0221 (62-98)||(12575-12611)
[»] scaffold0121 (1 HSPs)
scaffold0121 (129-232)||(8165-8267)
[»] scaffold0423 (1 HSPs)
scaffold0423 (166-232)||(10904-10970)
[»] scaffold0235 (2 HSPs)
scaffold0235 (128-218)||(11170-11260)
scaffold0235 (138-210)||(14034-14106)
[»] scaffold0193 (2 HSPs)
scaffold0193 (154-232)||(13611-13689)
scaffold0193 (60-100)||(13526-13566)
[»] scaffold0114 (2 HSPs)
scaffold0114 (126-232)||(15108-15214)
scaffold0114 (172-232)||(32908-32968)
[»] scaffold0413 (1 HSPs)
scaffold0413 (60-228)||(15251-15420)
[»] scaffold0192 (1 HSPs)
scaffold0192 (2-232)||(10169-10399)
[»] scaffold0490 (2 HSPs)
scaffold0490 (128-232)||(2326-2430)
scaffold0490 (60-100)||(2267-2307)
[»] scaffold0064 (2 HSPs)
scaffold0064 (128-232)||(47360-47464)
scaffold0064 (184-222)||(64306-64344)
[»] scaffold0080 (3 HSPs)
scaffold0080 (157-232)||(40325-40400)
scaffold0080 (60-100)||(40228-40268)
scaffold0080 (8-99)||(19649-19739)
[»] scaffold0008 (3 HSPs)
scaffold0008 (1-60)||(14500-14559)
scaffold0008 (184-231)||(30379-30426)
scaffold0008 (186-222)||(2292-2328)
[»] scaffold0639 (2 HSPs)
scaffold0639 (154-232)||(8886-8964)
scaffold0639 (58-100)||(8788-8830)
[»] scaffold0484 (1 HSPs)
scaffold0484 (128-222)||(1288-1382)
[»] scaffold0165 (6 HSPs)
scaffold0165 (128-222)||(3855-3949)
scaffold0165 (128-222)||(7919-8013)
scaffold0165 (60-98)||(27485-27523)
scaffold0165 (118-210)||(27296-27388)
scaffold0165 (60-100)||(3796-3836)
scaffold0165 (60-100)||(7860-7900)
[»] scaffold0247 (1 HSPs)
scaffold0247 (135-232)||(6460-6557)
[»] scaffold0198 (1 HSPs)
scaffold0198 (179-232)||(26834-26887)
[»] scaffold0167 (1 HSPs)
scaffold0167 (179-232)||(36024-36077)
[»] scaffold0166 (1 HSPs)
scaffold0166 (2-232)||(9466-9696)
[»] scaffold0131 (1 HSPs)
scaffold0131 (179-232)||(36891-36944)
[»] scaffold0070 (1 HSPs)
scaffold0070 (135-232)||(4915-5012)
[»] scaffold0037 (1 HSPs)
scaffold0037 (2-232)||(79964-80194)
[»] scaffold0003 (2 HSPs)
scaffold0003 (60-232)||(339583-339756)
scaffold0003 (186-232)||(71729-71775)
[»] scaffold0540 (1 HSPs)
scaffold0540 (136-232)||(645-741)
[»] scaffold0309 (2 HSPs)
scaffold0309 (128-232)||(6984-7088)
scaffold0309 (60-100)||(6925-6965)
[»] scaffold0012 (2 HSPs)
scaffold0012 (118-193)||(227867-227942)
scaffold0012 (2-106)||(225667-225769)
[»] scaffold0084 (1 HSPs)
scaffold0084 (154-232)||(10569-10647)
[»] scaffold0032 (1 HSPs)
scaffold0032 (154-232)||(51979-52057)
[»] scaffold0124 (2 HSPs)
scaffold0124 (154-222)||(24293-24361)
scaffold0124 (60-98)||(24417-24455)
[»] scaffold1257 (1 HSPs)
scaffold1257 (1-51)||(2030-2080)
[»] scaffold0586 (1 HSPs)
scaffold0586 (134-232)||(2244-2342)
[»] scaffold0320 (1 HSPs)
scaffold0320 (127-193)||(12379-12445)
[»] scaffold1895 (1 HSPs)
scaffold1895 (161-222)||(891-952)
[»] scaffold0367 (1 HSPs)
scaffold0367 (160-225)||(1307-1372)
[»] scaffold0297 (2 HSPs)
scaffold0297 (161-222)||(10464-10525)
scaffold0297 (161-222)||(15322-15383)
[»] scaffold0004 (1 HSPs)
scaffold0004 (161-222)||(70211-70272)
[»] scaffold0139 (3 HSPs)
scaffold0139 (184-232)||(20421-20469)
scaffold0139 (135-206)||(38765-38836)
scaffold0139 (60-97)||(38635-38672)
[»] scaffold0106 (3 HSPs)
scaffold0106 (160-232)||(1692-1764)
scaffold0106 (160-232)||(7669-7741)
scaffold0106 (179-232)||(16083-16136)
[»] scaffold1419 (1 HSPs)
scaffold1419 (60-95)||(339-374)
[»] scaffold0210 (2 HSPs)
scaffold0210 (179-222)||(21449-21492)
scaffold0210 (179-222)||(29341-29384)
[»] scaffold0079 (1 HSPs)
scaffold0079 (184-231)||(44488-44535)
[»] scaffold0043 (1 HSPs)
scaffold0043 (184-227)||(18678-18721)
[»] scaffold0040 (2 HSPs)
scaffold0040 (135-206)||(103241-103312)
scaffold0040 (1-99)||(103403-103500)
[»] scaffold0393 (1 HSPs)
scaffold0393 (184-226)||(1928-1970)
[»] scaffold0346 (1 HSPs)
scaffold0346 (186-232)||(17356-17402)
[»] scaffold0327 (1 HSPs)
scaffold0327 (160-222)||(680-742)
[»] scaffold0324 (1 HSPs)
scaffold0324 (184-222)||(15839-15877)
[»] scaffold0311 (1 HSPs)
scaffold0311 (184-222)||(6721-6759)
[»] scaffold1220 (1 HSPs)
scaffold1220 (186-231)||(2217-2262)
[»] scaffold0671 (1 HSPs)
scaffold0671 (186-231)||(6543-6588)
[»] scaffold0483 (1 HSPs)
scaffold0483 (186-231)||(747-792)
[»] scaffold0174 (1 HSPs)
scaffold0174 (184-225)||(18093-18134)
[»] scaffold0171 (1 HSPs)
scaffold0171 (186-231)||(35155-35200)
[»] scaffold0109 (1 HSPs)
scaffold0109 (186-231)||(45534-45579)
[»] scaffold0076 (1 HSPs)
scaffold0076 (121-210)||(24174-24263)
[»] scaffold1296 (1 HSPs)
scaffold1296 (186-226)||(830-870)
[»] scaffold1048 (1 HSPs)
scaffold1048 (186-230)||(1853-1897)
[»] scaffold0123 (1 HSPs)
scaffold0123 (129-193)||(25568-25632)
[»] scaffold0615 (1 HSPs)
scaffold0615 (184-231)||(1718-1765)
[»] scaffold0280 (1 HSPs)
scaffold0280 (184-223)||(18944-18983)
[»] scaffold0215 (1 HSPs)
scaffold0215 (179-222)||(27256-27299)
[»] scaffold0022 (2 HSPs)
scaffold0022 (135-206)||(80730-80801)
scaffold0022 (60-99)||(128735-128774)
[»] scaffold2044 (1 HSPs)
scaffold2044 (186-232)||(1088-1134)
[»] scaffold1403 (1 HSPs)
scaffold1403 (60-94)||(866-900)
[»] scaffold0676 (1 HSPs)
scaffold0676 (184-226)||(4865-4907)
[»] scaffold0476 (5 HSPs)
scaffold0476 (184-222)||(6020-6058)
scaffold0476 (184-222)||(7215-7253)
scaffold0476 (1-51)||(13025-13075)
scaffold0476 (135-232)||(8194-8290)
scaffold0476 (135-232)||(13235-13331)
[»] scaffold0412 (1 HSPs)
scaffold0412 (184-222)||(6059-6097)
[»] scaffold0158 (2 HSPs)
scaffold0158 (184-222)||(3277-3315)
scaffold0158 (184-222)||(6943-6981)
[»] scaffold0096 (1 HSPs)
scaffold0096 (184-222)||(15992-16030)
[»] scaffold0081 (1 HSPs)
scaffold0081 (184-222)||(15109-15147)
[»] scaffold0035 (1 HSPs)
scaffold0035 (184-222)||(46370-46408)
[»] scaffold0029 (1 HSPs)
scaffold0029 (184-222)||(13196-13234)
[»] scaffold0017 (3 HSPs)
scaffold0017 (184-222)||(190924-190962)
scaffold0017 (184-222)||(192627-192665)
scaffold0017 (186-230)||(14959-15003)
[»] scaffold1992 (1 HSPs)
scaffold1992 (197-246)||(246-295)
[»] scaffold0439 (2 HSPs)
scaffold0439 (186-231)||(2080-2125)
scaffold0439 (186-231)||(9940-9985)
[»] scaffold0342 (1 HSPs)
scaffold0342 (186-231)||(6915-6960)
[»] scaffold0301 (3 HSPs)
scaffold0301 (60-97)||(11937-11974)
scaffold0301 (60-97)||(15089-15126)
scaffold0301 (60-97)||(16337-16374)
[»] scaffold0101 (1 HSPs)
scaffold0101 (161-222)||(8600-8661)
[»] scaffold0098 (3 HSPs)
scaffold0098 (60-97)||(24529-24566)
scaffold0098 (60-97)||(35399-35436)
scaffold0098 (138-210)||(29156-29228)
[»] scaffold0015 (2 HSPs)
scaffold0015 (60-97)||(209240-209277)
scaffold0015 (186-230)||(191962-192006)
[»] scaffold0006 (2 HSPs)
scaffold0006 (60-97)||(97322-97359)
scaffold0006 (60-97)||(106600-106637)
[»] scaffold1552 (1 HSPs)
scaffold1552 (186-222)||(769-805)
[»] scaffold1351 (1 HSPs)
scaffold1351 (63-99)||(326-362)
[»] scaffold0761 (1 HSPs)
scaffold0761 (179-223)||(5951-5995)
[»] scaffold0737 (1 HSPs)
scaffold0737 (63-99)||(1562-1598)
[»] scaffold0273 (1 HSPs)
scaffold0273 (184-232)||(9070-9118)
[»] scaffold0141 (1 HSPs)
scaffold0141 (60-100)||(39792-39832)
[»] scaffold0111 (1 HSPs)
scaffold0111 (161-213)||(32849-32901)
[»] scaffold0104 (2 HSPs)
scaffold0104 (160-220)||(2240-2300)
scaffold0104 (160-220)||(9922-9982)
[»] scaffold0049 (1 HSPs)
scaffold0049 (60-100)||(74980-75020)


Alignment Details
Target: scaffold0810 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 8 - 246
Target Start/End: Original strand, 3196 - 3435
Alignment:
Q  8 gtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactc 107  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  3196 gtgcgacaaagatcgcatttaacctaaacaaggcattctgtaactagtcaattcacgaggcgagggcctctactcgccatggcgagttcaggtataactc 3295  T
Q  108 tcaaaactt-gttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttc 206  Q
     || || || ||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||    
T  3296 ccacaagttcgttcttaaactattccaggttcaatctcaatctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggatc 3395  T
Q  207 aactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    |||||||||||||||||||||||||  |||||||||||||    
T  3396 aactcaaaagtcaaaattacgaaatatggatagctctctg 3435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 168; Significance: 4e-90; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 39706151 - 39705920
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| ||||||||||||||||||||| |||||| || ||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||    
T  39706151 tcaactcgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggt 39706052  T
Q  101 gtaactctcaaaacttgttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctcta 200  Q
    ||||||||||||| | ||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  39706051 gtaactctcaaaattcgttcttaaactattccaggttcaatcttaatcttcaatctttcctaatcattattagacatgttcaggcactcaaaaacatcta 39705952  T
Q  201 aggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||||| ||| |||||||||||||||||    
T  39705951 aggttcaacttaaaggtcaaaattacgaaatc 39705920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 8846631 - 8846878
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| ||||||||||||||||||||| | |||| ||| ||||||||||||||| |  |||||||||||| ||||||||||||||||||||||| ||||    
T  8846631 tcaactcgtgcgacaaagatcgcatttaacataaacaagacattctgtaactagttagctcgcgaggcgagagcctctactcgccatggcgagttaaggt 8846730  T
Q  101 gtaactctcaaaacttg--ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctc 198  Q
    | ||||| |||||  |   |||| ||||  ||||| ||||||||| | |||||||||||||||||||||||||||||||||||| | |||||||||| ||    
T  8846731 gcaactcacaaaaaattcattctaaaatctttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggtactcaaaaacatc 8846830  T
Q  199 taaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    ||||  |||||||||||||||||||||||||||| |||||||||||||    
T  8846831 taagaatcaactcaaaagtcaaaattacgaaatctggatagctctctg 8846878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 9 - 232
Target Start/End: Original strand, 15099615 - 15099839
Alignment:
Q  9 tgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactct 108  Q
    ||||||||||||||| |||| |||||| ||| |||||||||||| || |  |||||||||||| ||||||||||||||||||||||||||||| |||||     
T  15099615 tgcgacaaagatcgcttttaacctaaacaagacattctgtaactggttagctcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaactca 15099714  T
Q  109 caaaactt-gttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttca 207  Q
    ||||| ||  |||||||| ||||||| ||||||||| ||||| ||||||||||||||||| || | ||| ||||| |||||||||||| ||||||||||     
T  15099715 caaaaattcattcttaaactattccaggttcaatctcaatctacaatctttcctaatcatcatcatacaagttcaggcactcaaaaacatctaaggttcg 15099814  T
Q  208 actcaaaagtcaaaattacgaaatc 232  Q
    ||| ||| ||||||| ||| |||||    
T  15099815 acttaaaggtcaaaactacaaaatc 15099839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 12774256 - 12774501
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| ||||||||| ||||||||||| |||||| |||||| ||||||||      | |||||||||||| |||||| |||||||||||||||||||||    
T  12774256 tcaactcgtgcgacaaggatcgcatttaacctaaacaaggcagtctgtaacacaagtactcgcgaggcgagagcctctgctcgccatggcgagttcaggt 12774355  T
Q  101 gtaactctcaaaacttgttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctcta 200  Q
      |  || ||||| |  |||| |  |   |||| ||||||||| | |||||||||||| ||||||||||||||||||||||| |||||||||||| ||||    
T  12774356 tcagttcacaaaattcattctaacgtctctccaggttcaatctcattctccaatcttttctaatcattattagacatgttcaggcactcaaaaacatcta 12774455  T
Q  201 aggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    ||| |||||||||||||||||||||||||||| | |||||||||||    
T  12774456 aggatcaactcaaaagtcaaaattacgaaatctgaatagctctctg 12774501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 15190574 - 15190795
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| |||||||||||||||| |||| |||||| |||||||||||||||| || |  |||||||||||| |||||||||||||||||||||| ||| |    
T  15190574 tcaactcgtgcgacaaagatcgcttttaacctaaacaaggcattctgtaactggttagctcgcgaggcgagagcctctactcgccatggcgagtacagat 15190673  T
Q  101 gtaactctcaaaact-tgttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
    ||||| | ||||| |   |||||||| ||||||| ||| ||||| |||||  || |||| |||||||| |||||||||||||| |||||||||||| |||    
T  15190674 gtaacgcccaaaaatccattcttaaactattccaggttaaatctcaatctagaaccttttctaatcataattagacatgttcaggcactcaaaaacatct 15190773  T
Q  200 aaggttcaactcaaaagtcaaa 221  Q
    ||||||| ||| ||| ||||||    
T  15190774 aaggttcgacttaaaggtcaaa 15190795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 60 - 232
Target Start/End: Original strand, 13844855 - 13845028
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatcttt 158  Q
    |||||||||||| |||||||||||||||||| ||| |||||||||||| ||||| |   |||||||| ||||||| ||| |||||| ||||  |||||||    
T  13844855 tcgcgaggcgagagcctctactcgccatggcaagtacaggtgtaactcccaaaaatccattcttaaactattccaggttaaatcttgatctagaatcttt 13844954  T
Q  159 cctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
     |||||||| ||||||||||||||  ||||||||||| |||||||||||||| |||||||||||||||||||||    
T  13844955 tctaatcataattagacatgttcagacactcaaaaacatctaaggttcaacttaaaagtcaaaattacgaaatc 13845028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 2 - 231
Target Start/End: Complemental strand, 15464791 - 15464562
Alignment:
Q  2 caacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtg 101  Q
    ||||||||||||||||||| |||   |||||||| ||| |||||||||||| | ||| |||||||||||| |||||||||||| |||| |||||||||||    
T  15464791 caacttgtgcgacaaagattgcaaa-atcctaaacaagtcattctgtaactgggcaactcgcgaggcgagagcctctactcgctatggtgagttcaggtg 15464693  T
Q  102 taactctcaaaact-tgttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctcta 200  Q
    |||| | ||||| |   |||||||| |||| || ||||||||| |||||  ||||||||||||||||||||| |||| |||| |||||||||| | ||||    
T  15464692 taacacccaaaaatccattcttaaactatttcaggttcaatctcaatctaaaatctttcctaatcattattatacatattcaggcactcaaaatcatcta 15464593  T
Q  201 aggttcaactcaaaagtcaaaattacgaaat 231  Q
    |   |||||| ||  ||||||| ||||||||    
T  15464592 aatatcaacttaagggtcaaaactacgaaat 15464562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 73 - 232
Target Start/End: Complemental strand, 43198380 - 43198220
Alignment:
Q  73 gcctctactcgccatggcgagttcaggtgtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattatt 171  Q
    |||||||||||| |||| ||||||||||||||||| ||||| |   |||||||| ||||||| ||||||||| |||||  ||||||||||||||||||||    
T  43198380 gcctctactcgctatggtgagttcaggtgtaactcccaaaaatcaattcttaaactattccatgttcaatctcaatctaaaatctttcctaatcattatt 43198281  T
Q  172 agacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    | ||||||||| |||||||||||| ||||||||| |||| ||  ||||||| |||||||||    
T  43198280 acacatgttcaggcactcaaaaacatctaaggtttaacttaagggtcaaaactacgaaatc 43198220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 189
Target Start/End: Complemental strand, 52243048 - 52242868
Alignment:
Q  8 gtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactc 107  Q
    |||||||||||||||||   |||||||| ||| |||||||||||| | ||| |||||||||||| |||||||||||| ||||||||||||||||||||||    
T  52243048 gtgcgacaaagatcgcaaa-atcctaaacaag-cattctgtaactgggcaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaactc 52242951  T
Q  108 tcaa-aacttgttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactc 189  Q
     ||| ||    |||||||| ||||||| ||||||||| | |||  |||||||||| |||||||||| ||||||||| ||||||    
T  52242950 ccaacaatgcattcttaaactattccaggttcaatctcattctagaatctttcctgatcattattatacatgttcaggcactc 52242868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 232
Target Start/End: Original strand, 24029000 - 24029230
Alignment:
Q  2 caacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaa--ctagtcaattcgcgaggcgagggcctctactcgccatggcgagttcagg 99  Q
    ||||| ||||||||||||||||||||| |||||| ||||||||||||||  |||||    |||||||||||| |||||| |||||||||||||||||||     
T  24029000 caactcgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaatactagtgc--tcgcgaggcgagagcctctgctcgccatggcgagttcag- 24029096  T
Q  100 tgtaactctcaaaacttg--ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacct 197  Q
    |   | |||| ||| ||   |||| || |  ||||| ||||||||| |  || || |||||| |||||| ||||||||||||||| ||||||||| || |    
T  24029097 tcagattctccaaagtttcattct-aagtctttccaggttcaatctcatcctacattctttcataatcaatattagacatgttcaggcactcaaagacat 24029195  T
Q  198 ctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||||||||||||||||||||| ||||||||    
T  24029196 ctaaggttcaactcaaaagtcaaaatcacgaaatc 24029230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 8 - 232
Target Start/End: Complemental strand, 44928778 - 44928555
Alignment:
Q  8 gtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactc 107  Q
    |||||||||||||||||   |||||||| ||| |||||||||||| |   | |||||||||||| |||||| ||||||||||||||||| |||   | ||    
T  44928778 gtgcgacaaagatcgcaaa-atcctaaacaag-cattctgtaactgggtcactcgcgaggcgagagcctctgctcgccatggcgagttctggtcagattc 44928681  T
Q  108 tcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttc 206  Q
     ||||  ||  |||| ||||  ||||| ||||||||| | ||| || ||||||||||||||||||||| ||||||| |||||||||||| | ||||| ||    
T  44928680 ccaaagtttcattctaaaatctttccaggttcaatctcattctacattctttcctaatcattattagatatgttcaggcactcaaaaacatataaggatc 44928581  T
Q  207 aactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||| ||| ||||    
T  44928580 aactcaaaagtcaaaatcacggaatc 44928555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 128 - 229
Target Start/End: Complemental strand, 14053049 - 14052948
Alignment:
Q  128 attccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacg 227  Q
    |||||||||||||||| |  || || |||||||||||||||||||||||| |||| |||||||||| | |||||||||||||||||||||||||| ||||    
T  14053049 attccaagttcaatctcatcctacattctttcctaatcattattagacatattcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaatacg 14052950  T
Q  228 aa 229  Q
    ||    
T  14052949 aa 14052948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 128 - 232
Target Start/End: Original strand, 3097017 - 3097121
Alignment:
Q  128 attccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacg 227  Q
    |||||| ||||||||| |  || || ||||||||||||||||||||||||||||| |||||| ||||| ||||||||| ||||||||||||||||||| |    
T  3097017 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcgaaaacatctaaggtttaactcaaaagtcaaaattatg 3097116  T
Q  228 aaatc 232  Q
    |||||    
T  3097117 aaatc 3097121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 128 - 232
Target Start/End: Original strand, 7089251 - 7089355
Alignment:
Q  128 attccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacg 227  Q
    |||||| ||||||||| |  || || ||||||||||||||||||||||||||||| ||||||| |  | |||||||||||||||||||||||||||||||    
T  7089251 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcataggcatctaaggttcaactcaaaagtcaaaattacg 7089350  T
Q  228 aaatc 232  Q
    |||||    
T  7089351 aaatc 7089355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 128 - 232
Target Start/End: Original strand, 12903131 - 12903234
Alignment:
Q  128 attccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacg 227  Q
    |||||| ||||||||| |  || || ||||||||||||||||||||||||||||| |||||| ||| | |||||||||||||||||||||||||||||||    
T  12903131 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactc-aaagcatctaaggttcaactcaaaagtcaaaattacg 12903229  T
Q  228 aaatc 232  Q
    |||||    
T  12903230 aaatc 12903234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 246
Target Start/End: Complemental strand, 21815138 - 21814921
Alignment:
Q  28 atcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaacttg-ttcttaaat 126  Q
    |||||||| ||||| |||||||| | | ||| |||||||||||| ||||||||||||||||||||||||| ||     ||  |||| ||  ||||||| |    
T  21815138 atcctaaacaaggc-ttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgagttcaagtcagcttccaaaaagttcattcttaa-t 21815041  T
Q  127 tattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattac 226  Q
    || |||| ||||| | | | |||  | ||||||||||||||||||| |||||||||  ||||||||| | ||||||| ||||||||||||||||||| ||    
T  21815040 taatccaggttcattatcattctaaattctttcctaatcattattaaacatgttcagacactcaaaagcatctaaggatcaactcaaaagtcaaaatcac 21814941  T
Q  227 gaaatccggatagctctctg 246  Q
    |||||  |||||||||||||    
T  21814940 gaaatttggatagctctctg 21814921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 246
Target Start/End: Complemental strand, 21815467 - 21815250
Alignment:
Q  28 atcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaacttg-ttcttaaat 126  Q
    |||||||| ||||| |||||||| | | ||| |||||||||||| ||||||||||||||||||||||||||||     ||  |||| ||  ||||||| |    
T  21815467 atcctaaacaaggc-ttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgagttcaggtcagcttccaaaaagttcattcttaa-t 21815370  T
Q  127 tattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattac 226  Q
    || |||| ||||| | | | |||  | | ||||||||||||||||| |||||||||  ||||||||| | ||||||| ||||||||||||||||||| ||    
T  21815369 taatccaggttcattatcattctaaattatttcctaatcattattaaacatgttcagacactcaaaagcatctaaggatcaactcaaaagtcaaaatcac 21815270  T
Q  227 gaaatccggatagctctctg 246  Q
    |||||  |||||||||||||    
T  21815269 gaaatttggatagctctctg 21815250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 246
Target Start/End: Complemental strand, 21818560 - 21818343
Alignment:
Q  28 atcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaacttg-ttcttaaat 126  Q
    |||||||| ||||| |||||||| | | ||| |||||||||||| ||||||||||||||||||||||||| ||     ||  |||| ||  ||||||| |    
T  21818560 atcctaaacaaggc-ttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgagttcaagtcagcttccaaaaagttcattcttaa-t 21818463  T
Q  127 tattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattac 226  Q
    || |||| ||||| | | | |||  | ||||||||||||||||||| |||||||||  ||||||||| | ||||||| ||||||||||||||||||| ||    
T  21818462 taatccaggttcattatcattctaaattctttcctaatcattattaaacatgttcagacactcaaaagcatctaaggatcaactcaaaagtcaaaatcac 21818363  T
Q  227 gaaatccggatagctctctg 246  Q
    |||||  |||||||||||||    
T  21818362 gaaatttggatagctctctg 21818343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 15552224 - 15552302
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||||||||||| |||||||||| | | |||||||||||||||||||||||| |||||||||    
T  15552224 tctttcctaatcattattagacatgttcaggcactcaaaagcatataaggttcaactcaaaagtcaaaaatacgaaatc 15552302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 16239702 - 16239624
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||||||||||| |||||||||| | |||||||  |||||||||||||||||||||||||||    
T  16239702 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggagcaactcaaaagtcaaaattacgaaatc 16239624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 16597031 - 16597128
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattac 226  Q
    ||||| ||||||||| | ||| || ||||||||||||||||||||||||||||| |||||||||| | |||||||||||| |||||| ||||||||||    
T  16597031 ttccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaattcaaaaatcaaaattac 16597128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 60 - 246
Target Start/End: Original strand, 44102526 - 44102712
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatcttt 158  Q
    |||||||||||| |||||| |||||||||||||||||||||   | |||||||  ||  |||| ||||   |||| ||||||||| |  || || ||||     
T  44102526 tcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattctcaaagttttattctaaaatctatccaggttcaatctcatcctacattctt- 44102624  T
Q  159 cctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    | |||||||||||| ||||| ||| |||||||||| | ||||||| ||||||||||||||||||| |||||||  |||||||||||||    
T  44102625 cataatcattattaaacatgctcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacgaaatttggatagctctctg 44102712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 129 - 246
Target Start/End: Original strand, 6190819 - 6190936
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||| ||||||||| |  || || ||| ||||||||||||||| ||||||||| |||||||||| | ||||||| ||||||||||||||||||| | ||    
T  6190819 ttccaggttcaatctcatcctacattctctcctaatcattattaaacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcatga 6190918  T
Q  229 aatccggatagctctctg 246  Q
    |||  |||||||||||||    
T  6190919 aatttggatagctctctg 6190936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 135 - 232
Target Start/End: Original strand, 14039041 - 14039138
Alignment:
Q  135 gttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||| | ||| || ||||||| ||||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||||||| | ||||||    
T  14039041 gttcaatctcattctacattctttccaaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcatgaaatc 14039138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 232
Target Start/End: Original strand, 15091212 - 15091386
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaacttg--ttcttaaattattccaagttcaatcttaatctccaatctt 157  Q
    |||||||||||| |||||| |||||| ||||||||||||||   | |  ||||| ||   |||| ||||  ||||| ||||||||| | ||| || ||||    
T  15091212 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagtttcattctaaaatccttccaggttcaatctcattctacattctt 15091311  T
Q  158 tcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||| |||||||||||||||   |||||||| | ||||| | ||||||||||||||||||| ||||||||    
T  15091312 tcctaatcaatattagacatgttcagaaactcaaaagcatctaaagatcaactcaaaagtcaaaatcacgaaatc 15091386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 8 - 232
Target Start/End: Complemental strand, 22634069 - 22633845
Alignment:
Q  8 gtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactc 107  Q
    ||||||||||||||||||||| |||||| |||||||||||||||        |||||||||||| |||||| ||||||||||||||||||  | | | |     
T  22634069 gtgcgacaaagatcgcatttaacctaaacaaggcattctgtaacacaagtgctcgcgaggcgagagcctctgctcgccatggcgagttcaa-tctgatta 22633971  T
Q  108 tcaaaacttg--ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggtt 205  Q
    || ||| ||   |||| || |  ||||| ||||||||| |  || || ||||||||||||| ||||||||||||||| ||||||||   | ||||| |||    
T  22633970 tccaaagtttcattct-aagtctttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaagggcatctaaagtt 22633872  T
Q  206 caactcaaaagtcaaaattacgaaatc 232  Q
    |||||||||||||||||| ||||||||    
T  22633871 caactcaaaagtcaaaatcacgaaatc 22633845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 156 - 222
Target Start/End: Complemental strand, 17047792 - 17047726
Alignment:
Q  156 tttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||||||||||| |||||||| ||||||||| || ||||||||||||||||||||||||||    
T  17047792 tttcctaatcattattagtcatgttcaggcactcaaagacatctaaggttcaactcaaaagtcaaaa 17047726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 232
Target Start/End: Complemental strand, 20157152 - 20156922
Alignment:
Q  2 caacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaa--ctagtcaattcgcgaggcgagggcctctactcgccatggcgagttcagg 99  Q
    ||||| ||||||||||||||||||||| |||||| |||||| |||||||  |||||    |||||||||||| |||||| | |||||||||||||||||     
T  20157152 caactcgtgcgacaaagatcgcatttaacctaaacaaggcactctgtaatactagtgc--tcgcgaggcgagagcctctgcacgccatggcgagttcagt 20157055  T
Q  100 tgtaactctcaaaacttgttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
      ||    |||||  ||  |  |||    ||||| ||||||||| |  || || ||||||||||||| ||||||||||||||| |||||||||  | |||    
T  20157054 catattcttcaaagtttcattctaagcctttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaaggcatct 20156955  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||| | ||||||||||||||||| ||||||||    
T  20156954 aaggattaactcaaaagtcaaaatcacgaaatc 20156922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 232
Target Start/End: Complemental strand, 13812671 - 13812441
Alignment:
Q  2 caacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaa--ctagtcaattcgcgaggcgagggcctctactcgccatggcgagttcagg 99  Q
    ||||| |||||||||||||| |||||| |||||| || |||||||||||  |||||    |||||||||||| |||||| |||||||||||||||| ||     
T  13812671 caactcgtgcgacaaagatcacatttaacctaaacaaagcattctgtaatactagtgc--tcgcgaggcgagagcctctgctcgccatggcgagtttag- 13812575  T
Q  100 tgtaactctcaaaacttg--ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacct 197  Q
    |   | |||| ||| ||   |||| || |  ||||| ||||||||| |  || || | ||||||||||| |||||||||||||||  ||||||||  | |    
T  13812574 tcagattctccaaagtttcattct-aagtctttccaggttcaatctcatcctacattatttcctaatcaatattagacatgttcagacactcaaaggcat 13812476  T
Q  198 ctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||||||||||||||||||||| ||||||||    
T  13812475 ctaaggttcaactcaaaagtcaaaatcacgaaatc 13812441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 7799112 - 7799186
Alignment:
Q  158 tcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||||||||||| |||||||| |||||||||| | ||||||| |||||||| |||||||||| ||||||||    
T  7799112 tcctaatcattattagtcatgttcaggcactcaaaagcatctaaggatcaactcagaagtcaaaatcacgaaatc 7799186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 44053240 - 44053318
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||| |||||||||||||||||||||  ||||||||| | ||||||| ||||||||||||||||||| | ||||||    
T  44053240 tctttcccaatcattattagacatgttcagacactcaaaagcatctaaggatcaactcaaaagtcaaaatcatgaaatc 44053318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 3332151 - 3332240
Alignment:
Q  9 tgcgacaaagatcgcatttatcctaaagaaggcattctgta--actagtcaattcgcgaggcgagggcctctactcgccatggcgagttcag 98  Q
    |||||||||||||||||||| |||||| |||||||||||||  ||||||    |||||||||||| |||||| |||||||||||||||||||    
T  3332151 tgcgacaaagatcgcatttaacctaaacaaggcattctgtaatactagt--gctcgcgaggcgagagcctctgctcgccatggcgagttcag 3332240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 232
Target Start/End: Complemental strand, 16377323 - 16377154
Alignment:
Q  64 gaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttccta 162  Q
    |||||||| |||||| |||||| ||||||||||||||   | || ||||| ||  ||||   || |||||| ||||||||| |  || || | |||||||    
T  16377323 gaggcgagagcctctgctcgccgtggcgagttcaggtcagattcccaaaagttcattctacgatcattccaggttcaatctcatcctacattatttccta 16377224  T
Q  163 atcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||  | ||||||| | ||||||| ||||||||||||||||||| | ||||||    
T  16377223 atcattattagacatgttcagacgctcaaaagcatctaaggatcaactcaaaagtcaaaatcatgaaatc 16377154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 124 - 232
Target Start/End: Original strand, 22636815 - 22636923
Alignment:
Q  124 aattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaat 223  Q
    |||| ||||| ||||||||| |  || || |||||||||||||||||||||||| ||||  ||||||||| | ||||||| |||||||| ||||||||||    
T  22636815 aatttttccaggttcaatctcatcctacattctttcctaatcattattagacatcttcagacactcaaaagcatctaaggatcaactcagaagtcaaaat 22636914  T
Q  224 tacgaaatc 232  Q
     || |||||    
T  22636915 cacaaaatc 22636923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 210
Target Start/End: Complemental strand, 15868364 - 15868289
Alignment:
Q  135 gttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaact 210  Q
    ||||||||| |||||  || |||||||||||||||||| |||| |||| |||||||||| | ||||||||||||||    
T  15868364 gttcaatctcaatctaaaaactttcctaatcattattatacatattcaggcactcaaaatcatctaaggttcaact 15868289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 44676047 - 44676108
Alignment:
Q  161 taatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    ||||||||| || |||| || | |||||||||||| ||||||||||||||||||||||||||    
T  44676047 taatcattaataaacatctttaggcactcaaaaacatctaaggttcaactcaaaagtcaaaa 44676108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 98
Target Start/End: Complemental strand, 13654 - 13616
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcag 98  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  13654 tcgcgaggcgagggcctctactcgctatggcgagttcag 13616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 222
Target Start/End: Original strand, 13569950 - 13569988
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  13569950 gcactcaaaaacatctaaggttcaactcaaaagtcaaaa 13569988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 222
Target Start/End: Original strand, 15094211 - 15094249
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  15094211 gcactcaaaaacatctaaggttcaactcaaaagtcaaaa 15094249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 15121484 - 15121446
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  15121484 gcactcaaaaacatctaaggttcaactcaaaagtcaaaa 15121446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 226
Target Start/End: Complemental strand, 16348373 - 16348331
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaattac 226  Q
    |||||||||| | ||||||||||||||||||||||||||||||    
T  16348373 gcactcaaaagcatctaaggttcaactcaaaagtcaaaattac 16348331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 192
Target Start/End: Original strand, 17046727 - 17046765
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaa 192  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  17046727 tctttcctaatcattattagacatgttcaggcactcaaa 17046765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 222
Target Start/End: Original strand, 23843917 - 23843955
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  23843917 gcactcaaaaacatctaaggttcaactcaaaagtcaaaa 23843955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 232
Target Start/End: Complemental strand, 13502 - 13405
Alignment:
Q  135 gttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||| |||||  || ||| |||||||||||||| || |||||| |||||||||| | ||||| |||||||| ||  ||||||| ||| |||||    
T  13502 gttcaatctcaatctaaaaacttgcctaatcattattatacttgttcaggcactcaaaatcatctaaagttcaacttaagggtcaaaaatacaaaatc 13405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 7089192 - 7089232
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  7089192 tcgcgaggcgagagcctctgctcgccatggcgagttcaggt 7089232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 17047878 - 17047838
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  17047878 tcgcgaggcgagagcctctgctcgccatggcgagttcaggt 17047838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 232
Target Start/End: Original strand, 17053485 - 17053520
Alignment:
Q  197 tctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||||||||||||||||||||| |||||||||    
T  17053485 tctaaggttcaactcaaaagtcaaaaatacgaaatc 17053520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Original strand, 12570459 - 12570497
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||||| |||||||||||||||| |||||||||    
T  12570459 gcactcaaaaacatctaaggttcaactcacaagtcaaaa 12570497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 16356634 - 16356596
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||| | ||||||||||||||||||||||||||    
T  16356634 gcactcaaaagcatctaaggttcaactcaaaagtcaaaa 16356596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 27534441 - 27534487
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||| || |||||||||||||||||||||| ||||||| |||||    
T  27534441 actcaaagacatctaaggttcaactcaaaagtcgaaattacaaaatc 27534487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 32851868 - 32851918
Alignment:
Q  160 ctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaact 210  Q
    ||||||||||||| |||| |||| |||||||||| | ||||||||||||||    
T  32851868 ctaatcattattatacatattcaggcactcaaaatcatctaaggttcaact 32851918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 61 - 102
Target Start/End: Complemental strand, 23374164 - 23374123
Alignment:
Q  61 cgcgaggcgagggcctctactcgccatggcgagttcaggtgt 102  Q
    ||||||||||| |||||| |||||| ||||||||||||||||    
T  23374164 cgcgaggcgagagcctctgctcgccgtggcgagttcaggtgt 23374123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 3096958 - 3096998
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  3096958 tcgcgaggcgagagcctctgctcgccttggcgagttcaggt 3096998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 222
Target Start/End: Original strand, 3413212 - 3413248
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||| | ||||||||||||||||||||||||||    
T  3413212 actcaaaagcatctaaggttcaactcaaaagtcaaaa 3413248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 7799012 - 7799052
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  7799012 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 7799052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 11250251 - 11250207
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaa 230  Q
    |||||||| | |||||||||||||||||||||| ||| |||||||    
T  11250251 actcaaaagcatctaaggttcaactcaaaagtccaaaatacgaaa 11250207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 12903072 - 12903112
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||| | ||||||||||||| ||||||||||||||    
T  12903072 tcgcgaggcgggagcctctactcgccgtggcgagttcaggt 12903112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 16351538 - 16351494
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaa 230  Q
    |||||||| | |||||||||||||||||||||| ||| |||||||    
T  16351538 actcaaaagcatctaaggttcaactcaaaagtccaaaatacgaaa 16351494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 222
Target Start/End: Complemental strand, 18602435 - 18602399
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||| | ||||||||||||||||||||||||||    
T  18602435 actcaaaagcatctaaggttcaactcaaaagtcaaaa 18602399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 222
Target Start/End: Complemental strand, 18609029 - 18608993
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||| | ||||||||||||||||||||||||||    
T  18609029 actcaaaagcatctaaggttcaactcaaaagtcaaaa 18608993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 165; Significance: 2e-88; HSPs: 75)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 3 - 246
Target Start/End: Original strand, 21673964 - 21674208
Alignment:
Q  3 aacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgt 102  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  21673964 aacttgtgcgacaaagatcgcatttatcctaaacaaggcattctgtaacaagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgc 21674063  T
Q  103 aactctcaaa-acttgttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaa 201  Q
    ||||| |||| | |  |||| ||||  ||||| ||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||| || ||    
T  21674064 aactcacaaatattcattctaaaatctttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacgtccaa 21674163  T
Q  202 ggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    || |||||||||||||||||||||||||||| |||||||||||||    
T  21674164 ggatcaactcaaaagtcaaaattacgaaatctggatagctctctg 21674208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 38855114 - 38854883
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| |||||||||||||||  |||| |||||  |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  38855114 tcaactcgtgcgacaaagatcgtgtttaacctaagcaaggcattctgtaactgggcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 38855015  T
Q  101 gtaactctcaaaacttgttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctcta 200  Q
    ||||||||||||| | ||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  38855014 gtaactctcaaaattcgttcttaaactattccaggttaaatcttaatctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatcta 38854915  T
Q  201 aggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||||| ||| |||||||||||||||||    
T  38854914 aggttcaacttaaaggtcaaaattacgaaatc 38854883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 23760703 - 23760458
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  23760703 tcaacttgtgcgacaaagatcgcatttatcctaac-aaggcattttgtaactagtcaattcgcgaggcgagggcctctactcgccttggcaagttcaggt 23760605  T
Q  101 gtaactctcaaaactt-gttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
     |||||| || || || ||||||||| ||||||| ||||||||| ||| |||||| ||||||||||||||||||||||||||| | |||||||||| |      
T  23760604 ataactcccacaagttcgttcttaaactattccaggttcaatctcaatatccaatatttcctaatcattattagacatgttcaggaactcaaaaacattc 23760505  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    | || ||||||||||||||||||||||| |||  ||||| |||||||    
T  23760504 agggatcaactcaaaagtcaaaattacgtaatatggataactctctg 23760458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 26355562 - 26355319
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||||||||||||||||||| | |||| ||||||||||||||||||| |  ||| |||||||| |||||||||||||||||| |||||||||    
T  26355562 tcaacttgtgcgacaaagatcgcatttaacataaacaaggcattctgtaactagttagctcgtgaggcgagagcctctactcgccatggcaagttcaggt 26355463  T
Q  101 gtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
      || || ||||| ||  |||| || |  ||||| ||||||||| ||||| |||||| ||||||||||||||||||||||||| |||||||||||| | |    
T  26355462 acaattcacaaaaattcattctaaagtctttccaggttcaatctcaatcttcaatctctcctaatcattattagacatgttcaggcactcaaaaacattt 26355363  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatccggatagctct 243  Q
    |||| |||||||||||||||||||||||||||| ||||||||||    
T  26355362 aaggatcaactcaaaagtcaaaattacgaaatctggatagctct 26355319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 13 - 232
Target Start/End: Original strand, 6520638 - 6520857
Alignment:
Q  13 acaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaa 112  Q
    |||||||||||||||| |||||  ||| |||||||||| | | || || ||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  6520638 acaaagatcgcatttaacctaacaaag-cattctgtaattgggcagtttgcgaggcgagggcctctactcgccatggcgaattcaggtctaactctcaaa 6520736  T
Q  113 acttg-ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactc 211  Q
    | |   |||||||| |||| || ||||| |||||||||||||||||||||||| |||||||||||||||||  ||||||||||| ||||||||||||||     
T  6520737 aatccattcttaaactatttcaggttcagtcttaatctccaatctttcctaattattattagacatgttcagacactcaaaaacatctaaggttcaactt 6520836  T
Q  212 aaaagtcaaaattacgaaatc 232  Q
    ||| |||||||||||||||||    
T  6520837 aaaggtcaaaattacgaaatc 6520857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 60 - 232
Target Start/End: Complemental strand, 19801232 - 19801059
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaactt-gttcttaaattattccaagttcaatcttaatctccaatcttt 158  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||| || || || ||||||||| ||||||| ||||||||||| |||| | |||||    
T  19801232 tcgcgaggcgaggacctctactcgccatggcgagttcaggtataactcccacaagttcgttcttaaactattccaggttcaatcttattctctagtcttt 19801133  T
Q  159 cctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||||||||||||||||||| ||||||| |  | ||||||| ||||||||||||||||||| ||||||||    
T  19801132 cctaatcattattagacatgttcaggcactcatatgcatctaaggatcaactcaaaagtcaaaatcacgaaatc 19801059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 12 - 246
Target Start/End: Original strand, 39834100 - 39834335
Alignment:
Q  12 gacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaa 111  Q
    ||||||||||||||||| | |||| |||| ||||||||| | |  |  |||||||||||| ||||||||||||||||||||||||||||| ||||| |||    
T  39834100 gacaaagatcgcatttaacttaaacaaggtattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaactcacaa 39834199  T
Q  112 aacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaact 210  Q
    |  ||  |||||||| ||||||| ||||||||| ||||| |||||||||||||||||||| | ||| ||| | |||||||||||| |||||||||| |||    
T  39834200 agattcattcttaaactattccaggttcaatctcaatctacaatctttcctaatcattatcatacaagtttaggcactcaaaaacatctaaggttcgact 39834299  T
Q  211 caaaagtcaaaattacgaaatccggatagctctctg 246  Q
     ||| ||||||| ||| |||||  || |||||||||    
T  39834300 taaaggtcaaaactacaaaatcatgacagctctctg 39834335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 60 - 232
Target Start/End: Original strand, 6759572 - 6759746
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaacttg--ttcttaaattattccaagttcaatcttaatctccaatctt 157  Q
    |||||||||||| |||||| |||||| ||||||||||||||   | |  ||||| ||   |||| ||||  ||||||||||||||| | ||| || ||||    
T  6759572 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagtttcattctaaaatatttccaagttcaatctcattctacattctt 6759671  T
Q  158 tcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||||||| ||||||||    
T  6759672 tcctaatcattattagacatgttcaagcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacgaaatc 6759746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 40 - 246
Target Start/End: Original strand, 41598480 - 41598687
Alignment:
Q  40 gcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaacttg-ttcttaaattattccaagttc 138  Q
    |||||||||||||||   | |||||||||||| |||||| |||||||||||||||||||||   | || ||||  ||  |||| ||||  ||||| ||||    
T  41598480 gcattctgtaactaggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctttccaggttc 41598579  T
Q  139 aatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatccggata 238  Q
    ||||| | ||| || |||||| |||||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||||||| ||| ||||| |  |    
T  41598580 aatctcattctacattctttcataatcattattagacatgttcaggcactcaaaagcatctaagggtcaactcaaaagtcaaaatcacggaatcctgcaa 41598679  T
Q  239 gctctctg 246  Q
    ||||||||    
T  41598680 gctctctg 41598687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 154 - 246
Target Start/End: Original strand, 7373160 - 7373252
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    ||||||||||||||||||||||||||||| |||||||||| | ||||||| |||||||||||||||||||||||||||  |||||||||||||    
T  7373160 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaattacgaaatttggatagctctctg 7373252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 135 - 232
Target Start/End: Complemental strand, 5866006 - 5865909
Alignment:
Q  135 gttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||| | ||| || ||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||| |||||||||    
T  5866006 gttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaatacgaaatc 5865909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 21285856 - 21285988
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| |||||| |||||||||||||| |||||  ||| |||||||||||| | ||| | |||||||||||||||||||||||||| ||||||||||||    
T  21285856 tcaactcgtgcgataaagatcgcatttaacctaacaaag-cattctgtaactgggcaacttgcgaggcgagggcctctactcgccatagcgagttcaggt 21285954  T
Q  101 gtaactctcaaaactt-gttcttaaattattcca 133  Q
    ||||||| ||||| ||  |||||||| |||||||    
T  21285955 gtaactcccaaaaattcattcttaaactattcca 21285988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 135 - 232
Target Start/End: Original strand, 21491384 - 21491481
Alignment:
Q  135 gttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||| | ||| || ||||||||||||||||||||||||||||| |||||||||| | |||||||||||||| ||||||||||||||| |||||    
T  21491384 gttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaacttaaaagtcaaaattacaaaatc 21491481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 128 - 232
Target Start/End: Complemental strand, 45130767 - 45130663
Alignment:
Q  128 attccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacg 227  Q
    |||||| ||||||||| |  || || ||||||||||||||||||||||||||||| |||||||||| | |||||||||||| ||||||||||||| ||||    
T  45130767 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaattcaaaagtcaaaaatacg 45130668  T
Q  228 aaatc 232  Q
    |||||    
T  45130667 aaatc 45130663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 129 - 232
Target Start/End: Complemental strand, 18878972 - 18878869
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||| ||||||||| |  || || ||||||||||||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||||||| ||||    
T  18878972 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacga 18878873  T
Q  229 aatc 232  Q
    ||||    
T  18878872 aatc 18878869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 60 - 232
Target Start/End: Original strand, 23406696 - 23406870
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaacttg--ttcttaaattattccaagttcaatcttaatctccaatctt 157  Q
    |||||||||||| ||||||||||||| ||||||||||||||   | || || || ||   ||||  |||  ||||| || |||||| |  || || ||||    
T  23406696 tcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggtccaatctcatcctacattctt 23406795  T
Q  158 tcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||||||| ||||||||    
T  23406796 tcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacgaaatc 23406870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 16092051 - 16091973
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||||||| ||||||||    
T  16092051 tctttcctaatcattattagacatgttcatgcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacgaaatc 16091973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 21918720 - 21918642
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||| ||||||||||||||||||||||| |||||| ||| | ||||||||||||||||||||||||||||||||||||    
T  21918720 tcttttctaatcattattagacatgttcaggcactccaaagcatctaaggttcaactcaaaagtcaaaattacgaaatc 21918642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 22627146 - 22627224
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||||||| ||||||||    
T  22627146 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacgaaatc 22627224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 135 - 232
Target Start/End: Original strand, 17141305 - 17141402
Alignment:
Q  135 gttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||| | ||| || ||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||| |||| ||| |||||    
T  17141305 gttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtaaaaaatacaaaatc 17141402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 60 - 232
Target Start/End: Original strand, 20536523 - 20536697
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaacttg--ttcttaaattattccaagttcaatcttaatctccaatctt 157  Q
    |||||||||||| ||||||||||||| ||||||||||||||   | || || || ||   ||||  |||  ||||| ||||||||| |  || || ||||    
T  20536523 tcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccataagtttcattctacaatctttccaggttcaatctcatcctacattctt 20536622  T
Q  158 tcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||| ||||||||||| |||||||||| | ||||||||||||||| ||||||||||| || |||||    
T  20536623 tcctaatcattatcagacatgttcaggcactcaaaagcatctaaggttcaactcgaaagtcaaaatcacaaaatc 20536697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 129 - 232
Target Start/End: Complemental strand, 28648779 - 28648676
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||| ||||||||| |  || || |||||| |||||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||||||| ||||    
T  28648779 ttccatgttcaatctcatcctacattctttcataatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacga 28648680  T
Q  229 aatc 232  Q
    ||||    
T  28648679 aatc 28648676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 31971656 - 31971733
Alignment:
Q  155 ctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||||||||||||||||||||||| |||| ||||| | ||||||||||||||||||||||||||  ||||||||    
T  31971656 ctttcctaatcattattagacatgttcaggcacacaaaagcatctaaggttcaactcaaaagtcaaaaacacgaaatc 31971733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 232
Target Start/End: Complemental strand, 18818118 - 18818042
Alignment:
Q  156 tttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||||||| | ||||||    
T  18818118 tttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcatgaaatc 18818042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 129 - 232
Target Start/End: Original strand, 21255605 - 21255708
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||| ||||||||| |  || || |||||||||||||||||||||||||||   |||||||||| | |||||||||||||||||||||||||| | |||    
T  21255605 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgtttgggcactcaaaagcatctaaggttcaactcaaaagtcaaaaatgcga 21255704  T
Q  229 aatc 232  Q
    ||||    
T  21255705 aatc 21255708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 16199368 - 16199290
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||| ||||||||| | |||||||||| | || ||||||||||||||||||||||| |||||||||    
T  16199368 tctttcctaatcattataagacatgttaaggcactcaaaagcatccaaggttcaactcaaaagtcaaaaatacgaaatc 16199290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 21249792 - 21249870
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||||||||||||||||||||||   |||||||||| | |||||||||||||||||||||||||| | |||||||    
T  21249792 tctttcctaatcattattagacatgtttgggcactcaaaagcatctaaggttcaactcaaaagtcaaaaatgcgaaatc 21249870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 154 - 222
Target Start/End: Original strand, 23648964 - 23649032
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||||||||||||||||||||||  ||||||||| | ||||||| ||||||||||||||||||    
T  23648964 tctttcctaatcattattagacatgttcagtcactcaaaagcatctaaggatcaactcaaaagtcaaaa 23649032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 158 - 232
Target Start/End: Complemental strand, 21923634 - 21923560
Alignment:
Q  158 tcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||||||||||||||||||||  ||||||||| | ||||||| ||||||||||||||||||| || |||||    
T  21923634 tcctaatcattattagacatgttcagacactcaaaagcatctaaggatcaactcaaaagtcaaaatcacaaaatc 21923560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 222
Target Start/End: Complemental strand, 25362887 - 25362793
Alignment:
Q  128 attccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||| ||||||||| |  || || |||||||||||||||||||| ||||||||  ||||||||  | ||||||||||||||||||||||||||    
T  25362887 attccaggttcaatctcatcctacattctttcctaatcattattagtcatgttcagtcactcaaaggcatctaaggttcaactcaaaagtcaaaa 25362793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 134 - 232
Target Start/End: Complemental strand, 21414957 - 21414859
Alignment:
Q  134 agttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||||| | ||| ||||||||||||||||||| |   ||| |||| |||||||||||| |||||||||| ||| |||||| |||||| |||||||    
T  21414957 agttcaatctcattctacaatctttcctaatcattagtgtgcatcttcaggcactcaaaaacatctaaggttccactaaaaagtaaaaattccgaaatc 21414859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 135 - 232
Target Start/End: Original strand, 20499052 - 20499149
Alignment:
Q  135 gttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||| |||||  || ||| |||||||||||||| ||||||||| |||||||||| | ||||| |||||||||||  ||||||| ||| |||||    
T  20499052 gttcaatctcaatctaaaaacttacctaatcattattatacatgttcaggcactcaaaatcatctaaagttcaactcaagggtcaaaactacaaaatc 20499149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 232
Target Start/End: Original strand, 22875381 - 22875554
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatcttt 158  Q
    |||||||||||| |||||| |||| ||||||||||||||||   | || ||||  ||  |||| ||||  ||||| |||||| ||   ||| ||||||||    
T  22875381 tcgcgaggcgagagcctctgctcgtcatggcgagttcaggtcagattcccaaagtttcattctaaaatctttccaggttcaacctcgttctacaatcttt 22875480  T
Q  159 cctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||||||||| ||||||| |  | ||||||| | ||||||| | |||||||| |||||||| ||||||||    
T  22875481 cctaatcattattaaacatgtttagacgctcaaaagcatctaaggattaactcaaaggtcaaaatcacgaaatc 22875554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 231
Target Start/End: Complemental strand, 16409936 - 16409889
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaat 231  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||    
T  16409936 gcactcaaaagcatctaaggttcaactcaaaagtcaaaattacgaaat 16409889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 231
Target Start/End: Complemental strand, 16861018 - 16860971
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaat 231  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||    
T  16861018 gcactcaaaagcatctaaggttcaactcaaaagtcaaaattacgaaat 16860971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 232
Target Start/End: Complemental strand, 21389156 - 21389085
Alignment:
Q  161 taatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||| ||||||  ||| |||| |||||||||| | |||||||||||||||||||||||||| |||||||||    
T  21389156 taatctttattaagcatcttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaatacgaaatc 21389085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 19899510 - 19899571
Alignment:
Q  161 taatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    ||||||||| || |||| || | |||||||||||| ||||||||||||||||||||||||||    
T  19899510 taatcattaataaacatctttaggcactcaaaaacatctaaggttcaactcaaaagtcaaaa 19899571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 231
Target Start/End: Complemental strand, 16411950 - 16411903
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaat 231  Q
    |||||||||||| | |||||||||||||||||||||||||||| ||||    
T  16411950 gcactcaaaaacatttaaggttcaactcaaaagtcaaaattacaaaat 16411903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 21249640 - 21249734
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttc 96  Q
    ||||||||  |||||||||||||||||| |||||| |||||||||||||||        |||||||||||| |||||| |||||||||||||||||    
T  21249640 tcaacttgaacgacaaagatcgcatttaacctaaa-aaggcattctgtaacacaaatgctcgcgaggcgagagcctctgctcgccatggcgagttc 21249734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 226
Target Start/End: Complemental strand, 15602698 - 15602656
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaattac 226  Q
    |||||||||| | ||||||||||||||||||||||||||||||    
T  15602698 gcactcaaaagcatctaaggttcaactcaaaagtcaaaattac 15602656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 226
Target Start/End: Complemental strand, 15611150 - 15611108
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaattac 226  Q
    |||||||||| | ||||||||||||||||||||||||||||||    
T  15611150 gcactcaaaagcatctaaggttcaactcaaaagtcaaaattac 15611108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 21161796 - 21161758
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  21161796 gcactcaaaaacttctaaggttcaactcaaaagtcaaaa 21161758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 21168402 - 21168364
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  21168402 gcactcaaaaacttctaaggttcaactcaaaagtcaaaa 21168364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 30642972 - 30642934
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  30642972 gcactcaaaaacatctaaggttcaactcaaaagtcaaaa 30642934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 17353641 - 17353580
Alignment:
Q  161 taatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    ||||| ||| ||| ||| |||| | |||||||||| ||||||||||||||||||||||||||    
T  17353641 taatctttaataggcatcttcagggactcaaaaacatctaaggttcaactcaaaagtcaaaa 17353580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 19976860 - 19976921
Alignment:
Q  161 taatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    ||||||||| || |||| || | |||||||||||| ||||||||||||||||||||| ||||    
T  19976860 taatcattaataaacatctttaggcactcaaaaacatctaaggttcaactcaaaagtaaaaa 19976921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 19983508 - 19983569
Alignment:
Q  161 taatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    ||||||||| || |||| || | |||||||||||| ||||||||||||||||||||| ||||    
T  19983508 taatcattaataaacatctttaggcactcaaaaacatctaaggttcaactcaaaagtaaaaa 19983569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 21918806 - 21918766
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  21918806 tcgcgaggcgagagcctctgctcgccatggcgagttcaggt 21918766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 206
Target Start/End: Complemental strand, 17266645 - 17266574
Alignment:
Q  135 gttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttc 206  Q
    ||||||||| |||||  || ||| |||||||||||||| |||| |||| |||||||||||| ||||| ||||    
T  17266645 gttcaatctcaatctaaaaacttgcctaatcattattatacatattcaggcactcaaaaacatctaaagttc 17266574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 231
Target Start/End: Complemental strand, 20856106 - 20856059
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaat 231  Q
    |||||||||| | ||||||||||||||||||| ||||||| |||||||    
T  20856106 gcactcaaaagcatctaaggttcaactcaaaattcaaaatcacgaaat 20856059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 99
Target Start/End: Original strand, 37116665 - 37116704
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcagg 99  Q
    |||||||||||| |||||||||||| ||||||||||||||    
T  37116665 tcgcgaggcgagagcctctactcgctatggcgagttcagg 37116704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Original strand, 377716 - 377754
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||| | ||||||||||||||||||||||||||    
T  377716 gcactcaaaagcatctaaggttcaactcaaaagtcaaaa 377754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 97
Target Start/End: Complemental strand, 2418680 - 2418642
Alignment:
Q  59 ttcgcgaggcgagggcctctactcgccatggcgagttca 97  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  2418680 ttcgcgaggcgagggcctctgctcgctatggcgagttca 2418642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 13507713 - 13507663
Alignment:
Q  160 ctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaact 210  Q
    ||||||||||||| |||| |||| |||||||||| | ||||||||||||||    
T  13507713 ctaatcattattatacatattcaggcactcaaaatcatctaaggttcaact 13507663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 13597245 - 13597195
Alignment:
Q  160 ctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaact 210  Q
    ||||||||||||| |||| |||| |||||||||| | ||||||||||||||    
T  13597245 ctaatcattattatacatattcaggcactcaaaatcatctaaggttcaact 13597195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Original strand, 16185166 - 16185204
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||||| |||| |||||||||||||||||||||    
T  16185166 gcactcaaaaacatctatggttcaactcaaaagtcaaaa 16185204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 20465720 - 20465682
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||| | ||||||||||||||||||||||||||    
T  20465720 gcactcaaaagcatctaaggttcaactcaaaagtcaaaa 20465682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 21286652 - 21286710
Alignment:
Q  174 acatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||| ||||| |||||| |||||||||||||| ||  ||||||| |||||||||    
T  21286652 acatgttcaggcacttaaaaacatctaaggttcaacttaagggtcaaaactacgaaatc 21286710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 222
Target Start/End: Complemental strand, 22010384 - 22010322
Alignment:
Q  160 ctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||| |||||| |||| || | |||||||||| | |||||||||||||| |||||||||||    
T  22010384 ctaatctttattaaacatcttaaggcactcaaaagcatctaaggttcaactaaaaagtcaaaa 22010322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 98
Target Start/End: Complemental strand, 22419220 - 22419182
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcag 98  Q
    |||||||| |||||||||||||||| |||||||||||||    
T  22419220 tcgcgaggtgagggcctctactcgctatggcgagttcag 22419182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Original strand, 24756159 - 24756197
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||||| ||||||||||||||||||||| ||||    
T  24756159 gcactcaaaaacatctaaggttcaactcaaaagtaaaaa 24756197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 5866129 - 5866045
Alignment:
Q  11 cgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttc 96  Q
    |||||||||||||||| | |||||| |||||||||||||||        |||||||||||| |||||| |||||||||||||||||    
T  5866129 cgacaaagatcgcattcaacctaaa-aaggcattctgtaacacaaacgctcgcgaggcgagagcctctgctcgccatggcgagttc 5866045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 97
Target Start/End: Complemental strand, 21967373 - 21967336
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttca 97  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  21967373 tcgcgaggcgagcgcctctactcgctatggcgagttca 21967336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 97
Target Start/End: Complemental strand, 21980098 - 21980061
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttca 97  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  21980098 tcgcgaggcgagcgcctctactcgctatggcgagttca 21980061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 97
Target Start/End: Complemental strand, 21985081 - 21985044
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttca 97  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  21985081 tcgcgaggcgagcgcctctactcgctatggcgagttca 21985044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 100
Target Start/End: Complemental strand, 25362943 - 25362906
Alignment:
Q  63 cgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    ||||||||| |||||| |||||||||||||||||||||    
T  25362943 cgaggcgagagcctctgctcgccatggcgagttcaggt 25362906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 97
Target Start/End: Complemental strand, 44493492 - 44493455
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttca 97  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  44493492 tcgcgaggcgagcgcctctactcgctatggcgagttca 44493455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 96
Target Start/End: Original strand, 17141230 - 17141266
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttc 96  Q
    |||||||||||| |||||| |||||||||||||||||    
T  17141230 tcgcgaggcgagagcctctgctcgccatggcgagttc 17141266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 222
Target Start/End: Original strand, 18619894 - 18619930
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||| | ||||||||||||||||||||||||||    
T  18619894 actcaaaagcatctaaggttcaactcaaaagtcaaaa 18619930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 18818215 - 18818175
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  18818215 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 18818175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 21395686 - 21395630
Alignment:
Q  161 taatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagt 217  Q
    ||||| ||||||  ||| |||| |||||||||| | |||||||||||||||||||||    
T  21395686 taatctttattaagcatcttcaggcactcaaaagcatctaaggttcaactcaaaagt 21395630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 21415049 - 21414997
Alignment:
Q  43 ttctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagtt 95  Q
    |||||||| | | ||| |||||||||||| | |||||||||||||||||||||    
T  21415049 ttctgtaattggacaactcgcgaggcgagaggctctactcgccatggcgagtt 21414997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 21790179 - 21790123
Alignment:
Q  161 taatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagt 217  Q
    ||||| ||||||  ||| |||| |||||||||| | |||||||||||||||||||||    
T  21790179 taatctttattaagcatcttcaggcactcaaaagcatctaaggttcaactcaaaagt 21790123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 222
Target Start/End: Original strand, 22028973 - 22029009
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||| | ||||||||||||||||||||||||||    
T  22028973 actcaaaagcatctaaggttcaactcaaaagtcaaaa 22029009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 95
Target Start/End: Original strand, 24353344 - 24353376
Alignment:
Q  63 cgaggcgagggcctctactcgccatggcgagtt 95  Q
    |||||||||||||||||||||| ||||||||||    
T  24353344 cgaggcgagggcctctactcgctatggcgagtt 24353376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 160; Significance: 2e-85; HSPs: 86)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 15471182 - 15471413
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| ||||||||||||||||||||| |||||| || ||||||||||||| | || ||| ||||||||||||||||||||||||||||||||||||||    
T  15471182 tcaactcgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcacgaggcgagggcctctactcgccatggcgagttcaggt 15471281  T
Q  101 gtaactctcaaaacttgttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctcta 200  Q
    ||||||||||||| | ||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||| | |||||||||| ||||    
T  15471282 gtaactctcaaaattcgttcttaaactattccaggttcaatcttaatctccaatctttcctaatcatcattatacatgttcagggactcaaaaacatcta 15471381  T
Q  201 aggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||||||||| |||||||||||||||||    
T  15471382 aggttcaactcaaaggtcaaaattacgaaatc 15471413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 16097587 - 16097830
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| ||||||||||||||||||||| | |||| ||| |||| |||||||||| |  |||||||||||| |||||||||| |||||||||||||||||    
T  16097587 tcaactcgtgcgacaaagatcgcatttaacataaacaagacattttgtaactagttagctcgcgaggcgagagcctctactcaccatggcgagttcaggt 16097686  T
Q  101 gtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
      || || ||||| ||  |||| ||||  || || ||||||||| | |||||||||||||||||| |||||||||||||||||  ||||||||||| | |    
T  16097687 ccaattcacaaaaattcattctaaaatcttttcaggttcaatctcattctccaatctttcctaataattattagacatgttcagacactcaaaaacattt 16097786  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatccggatagctct 243  Q
    |||| |||||||||||||||||||||||||||| ||||||||||    
T  16097787 aaggatcaactcaaaagtcaaaattacgaaatctggatagctct 16097830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 14234748 - 14234979
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    ||||||||| ||||||||||| |||||| |||||| |||||||||||||||| || |  | |||||||||||||||||||||||||||||||||||||||    
T  14234748 tcaacttgttcgacaaagatcacatttaacctaaacaaggcattctgtaactggttagcttgcgaggcgagggcctctactcgccatggcgagttcaggt 14234847  T
Q  101 gtaactctcaaaactt-gttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
    | ||||| ||||| ||  ||||| || |||| |  ||||||||| |||||  |||||||||||||||| |||| ||||||||| |||||||||||  |||    
T  14234848 gcaactcccaaaaattcattctt-aactatttcgggttcaatctcaatctataatctttcctaatcatcattatacatgttcaggcactcaaaaaaatct 14234946  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||| ||| |||||||||| ||||||    
T  14234947 aaggttcaacttaaaggtcaaaattatgaaatc 14234979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 12934174 - 12933928
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| ||||||||||||||||||||| |||||| |||| | ||||||||      | |||||||||||| | |||| |||||||||||||||||||||    
T  12934174 tcaactcgtgcgacaaagatcgcatttaacctaaacaaggaagtctgtaacacaagtactcgcgaggcgagagtctctgctcgccatggcgagttcaggt 12934075  T
Q  101 gtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
      |  || ||||| ||  |||| ||||  ||||| ||||||||| | |||| ||||||||||||||||||||||||||||||| |||||||||||| |||    
T  12934074 tcagttcacaaaatttcattctaaaatctttccaggttcaatctcattctctaatctttcctaatcattattagacatgttcaggcactcaaaaacatct 12933975  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    |||| |||||||||||||||||| ||||||||| |||||||||||||    
T  12933974 aaggatcaactcaaaagtcaaaagtacgaaatctggatagctctctg 12933928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 1465273 - 1465041
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| |||||||||||||  | |||| |||||| |||||||||||||||| || |  |||||||||||| |||||||||||||||||| |||||||||    
T  1465273 tcaactcgtgcgacaaagattacttttaacctaaacaaggcattctgtaactggttagctcgcgaggcgagagcctctactcgccatggcaagttcaggt 1465174  T
Q  101 gtaactctcaaaactt-gttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
    | ||||| || || || ||||||||||||||||| ||||||||| ||||| ||||||||| ||||||| || | ||| ||||| |||||||||||| |||    
T  1465173 gcaactcacacaaattcgttcttaaattattccaggttcaatctcaatctacaatctttcataatcatcatcatacaagttcaggcactcaaaaacatct 1465074  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||| ||| ||| ||||||| ||| |||||    
T  1465073 aaggttcgacttaaaggtcaaaactacaaaatc 1465041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 32307926 - 32308167
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| ||||||||||||||||||||| |||||| |||||||| ||||||      | |||||||||||| |||||| |||||||||||||||||||||    
T  32307926 tcaactcgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaacacaagtactcgcgaggcgagagcctctgctcgccatggcgagttcaggt 32308025  T
Q  101 gtaactctcaaaacttgttcttaaattattccaag-ttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
      |  || ||||| |  |||| ||| | |||| || |||||||| | |||||||||||||||||||||||||||| ||||||| |||||||||| | |||    
T  32308026 tcagttcccaaaattcattct-aaagtcttcctaggttcaatctcattctccaatctttcctaatcattattagatatgttcaggcactcaaaagcatct 32308124  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatccggatagctc 242  Q
    |||| |||||||||||||||||||||||||||| | |||||||    
T  32308125 aaggatcaactcaaaagtcaaaattacgaaatctgaatagctc 32308167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 3 - 246
Target Start/End: Original strand, 9513168 - 9513413
Alignment:
Q  3 aacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgt 102  Q
    |||||||||||||||||||||||||| | |||  |||||||||||||||      | || ||||||||| |||||| |||||||||| |||||||||| |    
T  9513168 aacttgtgcgacaaagatcgcatttaacataagcaaggcattctgtaacacaagtaatctcgaggcgagagcctctgctcgccatggtgagttcaggttt 9513267  T
Q  103 aactctcaaaacttg--ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctcta 200  Q
    |  || ||||| ||   |||| ||||  || || ||||||||| | |||| ||||||||||||||||||||||||||||||| |||||||||| | ||||    
T  9513268 agttcacaaaaatttcattctaaaatcttttcaggttcaatctcattctctaatctttcctaatcattattagacatgttcaggcactcaaaagcatcta 9513367  T
Q  201 aggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    ||| |||||||||||||||| | ||||||||| |||||||||||||    
T  9513368 aggatcaactcaaaagtcaatagtacgaaatctggatagctctctg 9513413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 3 - 246
Target Start/End: Original strand, 9521143 - 9521388
Alignment:
Q  3 aacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgt 102  Q
    |||||||||||||||||||||||||| | |||  |||||||||||||||      | || ||||||||| |||||| |||||||||| |||||||||| |    
T  9521143 aacttgtgcgacaaagatcgcatttaacataagcaaggcattctgtaacacaagtaatctcgaggcgagagcctctgctcgccatggtgagttcaggttt 9521242  T
Q  103 aactctcaaaacttg--ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctcta 200  Q
    |  || ||||| ||   |||| ||||  || || ||||||||| | |||| ||||||||||||||||||||||||||||||| |||||||||| | ||||    
T  9521243 agttcacaaaaatttcattctaaaatcttttcaggttcaatctcattctctaatctttcctaatcattattagacatgttcaggcactcaaaagcatcta 9521342  T
Q  201 aggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    ||| |||||||||||||||| | ||||||||| |||||||||||||    
T  9521343 aggatcaactcaaaagtcaatagtacgaaatctggatagctctctg 9521388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 49667947 - 49667702
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| ||||||||||||||| ||||| |||||| |||||| ||||||||      | |||||||||||| |||||| |||||||||||||||||||||    
T  49667947 tcaactcgtgcgacaaagatcgtatttaacctaaacaaggcagtctgtaacacaagtactcgcgaggcgagagcctctgctcgccatggcgagttcaggt 49667848  T
Q  101 gtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
      |  || ||| | ||  |||| ||||  ||||| ||||||||| | |||| ||||||||||||||||||||||||||||||| || ||| ||||| |||    
T  49667847 tcagttcacaatatttcattctaaaatctttccaggttcaatctcattctctaatctttcctaatcattattagacatgttcaggcgctc-aaaacatct 49667749  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    |||| |||||||||||||||||| ||||||||| |||||||||||||    
T  49667748 aaggatcaactcaaaagtcaaaagtacgaaatctggatagctctctg 49667702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 62 - 246
Target Start/End: Complemental strand, 49389446 - 49389262
Alignment:
Q  62 gcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaacttgttcttaaattattccaagttcaatcttaatctccaatctttcct 161  Q
    ||||||||||  ||||| |||||||||||||||||||||  |  || ||||| |  |||| || |   |||| ||||||||| | |||||||||||||||    
T  49389446 gcgaggcgagaacctctgctcgccatggcgagttcaggttcagttcacaaaattcattctaaagtctctccaggttcaatctcattctccaatctttcct 49389347  T
Q  162 aatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    ||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||| | |||||||||||    
T  49389346 aatcattattagacatgttcaggcactcaaaaacatctaaggatcaactcaaaagtcaaaattacgaaatctgaatagctctctg 49389262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 1644546 - 1644301
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| ||||||||| ||||||||||| | |||| |||||| | ||||||      | |||||||||||| |||||| |||||||||||||||||||||    
T  1644546 tcaactcgtgcgacaaggatcgcatttaacttaaacaaggcagtttgtaacacaagtactcgcgaggcgagagcctctgctcgccatggcgagttcaggt 1644447  T
Q  101 gtaactctcaaaacttgttcttaaattattc-caagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
      |  || ||||| |  |||| ||| | ||| || ||||||||| | |||| ||||||||||||||||||| ||||||||||| |||||||||||| ||     
T  1644446 tcagttcacaaaattcattct-aaagtcttctcaggttcaatctcattctctaatctttcctaatcattatcagacatgttcaggcactcaaaaacatcc 1644348  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    |||| |||||||||||||||||||||||||||| | |||||||||||    
T  1644347 aaggatcaactcaaaagtcaaaattacgaaatctgaatagctctctg 1644301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 12171968 - 12171735
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    ||||||||||||||||  |||||||||| |||||| ||||||||||||||||||| |  |||||||||||| |||||||||||||||||| |||||||||    
T  12171968 tcaacttgtgcgacaagaatcgcatttaacctaaacaaggcattctgtaactagttagatcgcgaggcgagagcctctactcgccatggccagttcaggt 12171869  T
Q  101 gtaactctcaaaactt-gttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
      |  || ||||| ||  |||| || |   |||| ||||||             ||||||||||||||||||||||||||||| |||||||||||| |||    
T  12171868 tcagttcacaaaaattcattctaaagtctctccaggttcaa-------------tctttcctaatcattattagacatgttcaggcactcaaaaacatct 12171782  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    |||| |||||| ||||||||||||||||||||  |||||||||||||    
T  12171781 aaggatcaactaaaaagtcaaaattacgaaatttggatagctctctg 12171735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 324493 - 324702
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    ||||||||| |||||||| || |||||| |||||  ||||  |||||||||| |  || |||||||||||| |||||||||||| |||||||||||||||    
T  324493 tcaacttgtacgacaaaggtcacatttaacctaac-aaggtgttctgtaacttggtaactcgcgaggcgagagcctctactcgctatggcgagttcaggt 324591  T
Q  101 gtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
    | ||||| ||||| ||  |||||||| |||||  |||||||||| | ||| |||||||||||||||||||||| |||| |||| |||||||||| | |||    
T  324592 gcaactcccaaaaattcattcttaaactattctcagttcaatctcattctacaatctttcctaatcattattatacatattcaggcactcaaaatcatct 324691  T
Q  200 aaggttcaact 210  Q
    || ||||||||    
T  324692 aaagttcaact 324702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 16104038 - 16104283
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| |||||||||||| |||||||| |||||| |||||| ||||||||      | || ||||||||| |||||| ||||||| | ||||||| | |    
T  16104038 tcaactcgtgcgacaaagagcgcatttaacctaaacaaggcagtctgtaacaccagtactcacgaggcgagagcctctgctcgccacgacgagttcggat 16104137  T
Q  101 gtaactctcaaaacttgttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctcta 200  Q
      || || ||||| |   ||| || |  | ||| |||||| || | |||||||||||||||||||||||||||||||||||| ||||||| |||| ||||    
T  16104138 tcaattcacaaaattcaatctaaagtcttcccaggttcaacctcattctccaatctttcctaatcattattagacatgttcaggcactcagaaacatcta 16104237  T
Q  201 aggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    ||| |||||||||||||||||||||||||||  |||||||||||||    
T  16104238 aggatcaactcaaaagtcaaaattacgaaatttggatagctctctg 16104283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 60 - 232
Target Start/End: Complemental strand, 17248091 - 17247918
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatcttt 158  Q
    |||||||||||| |||||| |||||||||||||||||||||   | || ||||  ||  |||| ||||  ||||| ||||||||| | ||| || |||||    
T  17248091 tcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctttccaggttcaatctcattctacattcttt 17247992  T
Q  159 cctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||| ||||||||    
T  17247991 cctaatcattattagacatgttcaggcactcaaaaacatctaaggatcaactcaaaagtcaaaatcacgaaatc 17247918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 8 - 232
Target Start/End: Complemental strand, 53070553 - 53070331
Alignment:
Q  8 gtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactc 107  Q
    |||||||||||||||||   |||||||| ||||| |||||||| | | ||| |||||||||||| ||||||||||||||||||||||||||||     ||    
T  53070553 gtgcgacaaagatcgcaaa-atcctaaacaaggc-ttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgagttcaggtcagcttc 53070456  T
Q  108 tcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttc 206  Q
      |||| ||  ||||||| ||| |||| ||||||||| | ||| || ||||||||||||||||||| ||||||||| |||||||||| | ||||||| ||    
T  53070455 caaaaagttcattcttaa-ttaatccaggttcaatctcattctacattctttcctaatcattattaaacatgttcaggcactcaaaagcatctaaggatc 53070357  T
Q  207 aactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||| ||||||||    
T  53070356 aactcaaaagtcaaaatcacgaaatc 53070331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 9 - 232
Target Start/End: Complemental strand, 2051053 - 2050833
Alignment:
Q  9 tgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactct 108  Q
    ||||||||||||||||   |||||||| ||| |||| ||||||| | ||| || ||||||||| |||||||||||| |||| |||||||||||||||||     
T  2051053 tgcgacaaagatcgcaaa-atcctaaacaag-cattttgtaactgggcaactcacgaggcgagagcctctactcgctatggagagttcaggtgtaactcc 2050956  T
Q  109 caaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttca 207  Q
    ||||| |   |||||||| |||||   ||||||||| |||||  ||||||||||||||||||||| ||||||| | |||||||||||| |||||||||||    
T  2050955 caaaaatccattcttaaactattcg--gttcaatctcaatctagaatctttcctaatcattattacacatgttgaggcactcaaaaacatctaaggttca 2050858  T
Q  208 actcaaaagtcaaaattacgaaatc 232  Q
    ||| ||  ||||||| ||| |||||    
T  2050857 acttaagggtcaaaactacaaaatc 2050833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 129 - 232
Target Start/End: Original strand, 14179708 - 14179811
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||||||||||||| | ||| || ||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||| |||||    
T  14179708 ttccaagttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaatacga 14179807  T
Q  229 aatc 232  Q
    ||||    
T  14179808 aatc 14179811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 8 - 193
Target Start/End: Complemental strand, 52523582 - 52523398
Alignment:
Q  8 gtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactc 107  Q
    |||||||||||||||||   |||||||| ||| |||||||||||| | ||| |||  |||||||||||||||||||| ||||||||||||||||||||||    
T  52523582 gtgcgacaaagatcgcaaa-atcctaaacaag-cattctgtaactgggcaactcgtcaggcgagggcctctactcgctatggcgagttcaggtgtaactc 52523485  T
Q  108 tcaaaact-tgttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaa 193  Q
     ||||| |   |||||||| | ||||| ||||||| | || ||  ||||||||||||| ||||||| ||||||||| ||||||||||    
T  52523484 ccaaaaatccattcttaaactgttccaggttcaatatcaaactagaatctttcctaataattattacacatgttcaggcactcaaaa 52523398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 13210191 - 13209960
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| |||||||||||||| |||||| |||||| |||||||||||||||        |||||||||||| |||||||||||||||||||||||| |||    
T  13210191 tcaactcgtgcgacaaagatcacatttaacctaaacaaggcattctgtaacacaagtgctcgcgaggcgagagcctctactcgccatggcgagttc-ggt 13210093  T
Q  101 gtaactctcaaaacttgttctt--aaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctc 198  Q
       | |||||| | || |  ||  || |  ||||| ||||||||| | ||| |  |||||||||||||| |||||||||||| | |||||||||| | ||    
T  13210092 cacattctcaagagttttcattctaagtctttccaggttcaatctcattctactttctttcctaatcat-attagacatgtttaggcactcaaaagcatc 13209994  T
Q  199 taaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||||||||||||||||||| |||||||||    
T  13209993 taaggttcaactcaaaagtcaaaaatacgaaatc 13209960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 2 - 232
Target Start/End: Original strand, 12340011 - 12340241
Alignment:
Q  2 caacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaa--ctagtcaattcgcgaggcgagggcctctactcgccatggcgagttcagg 99  Q
    ||||| |||||||||||||| |||||| |||||| |||||||| |||||  |||||    |||||||||||| |||||| |||||||||||||||||||     
T  12340011 caactcgtgcgacaaagatcacatttaacctaaacaaggcattatgtaatactagtgc--tcgcgaggcgagagcctctgctcgccatggcgagttcagt 12340108  T
Q  100 tgtaactctcaaaacttg--ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacct 197  Q
    |  |  |||| ||| ||   |||| || |  ||||| ||||||||| |  || || ||||||||||||| ||||||||||||||| |||||||||  | |    
T  12340109 tagat-tctccaaagtttcattct-aagtctttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaaggcat 12340206  T
Q  198 ctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||||||||||||||||||||| ||||||||    
T  12340207 ctaaggttcaactcaaaagtcaaaatcacgaaatc 12340241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 60 - 232
Target Start/End: Complemental strand, 40213526 - 40213353
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatcttt 158  Q
    |||||||||||| |||||| |||||| ||||||||||||||   | || ||||| ||  ||||  |||  ||||| ||||||||| |  || || |||||    
T  40213526 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagattcccaaaagttcattctacaatctttccaggttcaatctcatcctacattcttt 40213427  T
Q  159 cctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||||||||||||||||||| |||||||||| | ||||| | ||||||||||||||||||| ||||||||    
T  40213426 cctaatcattattagacatgttcaggcactcaaaagcatctaatgatcaactcaaaagtcaaaatcacgaaatc 40213353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 156 - 232
Target Start/End: Original strand, 12399608 - 12399684
Alignment:
Q  156 tttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||| |||||    
T  12399608 tttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaattacaaaatc 12399684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 128 - 232
Target Start/End: Complemental strand, 20698183 - 20698079
Alignment:
Q  128 attccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacg 227  Q
    |||||| ||||||||| |  || || |||||||||||||||||||||||||||||  ||||||||| | ||||||||||||||||||||||||||||||     
T  20698183 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcagacactcaaaagcatctaaggttcaactcaaaagtcaaaattaca 20698084  T
Q  228 aaatc 232  Q
    |||||    
T  20698083 aaatc 20698079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 60 - 232
Target Start/End: Complemental strand, 11424568 - 11424395
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaa--cttgttcttaaattattccaagttcaatcttaatctccaatctt 157  Q
    |||||||||||| ||||||||||||| ||||||||||||||   | | ||||||   ||  |  |||||  ||||| ||||||||| | ||| || | ||    
T  11424568 tcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagagt-tcaaaaagtttcattctaaatctttccaggttcaatctcattctacattatt 11424470  T
Q  158 tcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||||||| ||||||||    
T  11424469 tcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacgaaatc 11424395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 129 - 232
Target Start/End: Original strand, 18438920 - 18439023
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||| ||||||||| | | | || ||||||||||||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||||||| ||||    
T  18438920 ttccaggttcaatctcattttacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacga 18439019  T
Q  229 aatc 232  Q
    ||||    
T  18439020 aatc 18439023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 246
Target Start/End: Original strand, 42386671 - 42386914
Alignment:
Q  2 caacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtg 101  Q
    ||||| ||||||||||| |||||   |||||||| ||||| |||||||| | | ||| |||||||| ||| ||||||||||||||||||||||||||||     
T  42386671 caactcgtgcgacaaagttcgcaaa-atcctaaacaaggc-ttctgtaattgggcaactcgcgaggtgagagcctctactcgccatggcgagttcaggta 42386768  T
Q  102 taactctcaaaactt--gttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
    |||||| ||||| ||   ||||| || |||| || ||||||||  | |||  | |||| ||||||||||||||  |||||||| ||||||| ||||  ||    
T  42386769 taactcccaaaagtttcattctt-aactatttcaggttcaatcacagtctaaagtcttgcctaatcattattatgcatgttcatgcactcataaacaact 42386867  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    ||||||||||| ||| ||||||| |||| | ||  ||||||||||||    
T  42386868 aaggttcaacttaaaggtcaaaactacggattcatgatagctctctg 42386914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 14973265 - 14973343
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||||||| ||||||||    
T  14973265 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacgaaatc 14973343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 17247230 - 17247152
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||||||||||  |||||||||||| ||||||| ||||||||||||||||||| ||||||||    
T  17247230 tctttcctaatcattattagacatgttccggcactcaaaaacatctaaggatcaactcaaaagtcaaaatcacgaaatc 17247152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 232
Target Start/End: Original strand, 14669019 - 14669249
Alignment:
Q  2 caacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaa--ctagtcaattcgcgaggcgagggcctctactcgccatggcgagttcagg 99  Q
    ||||| ||||||||||||||| ||||| |||||| ||||||||||||||  |||||    |||||||| ||| |||||| |||||||||||||||||||     
T  14669019 caactcgtgcgacaaagatcgaatttaacctaaacaaggcattctgtaatactagtgc--tcgcgaggtgagagcctctgctcgccatggcgagttcag- 14669115  T
Q  100 tgtaactctcaaaacttg--ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacct 197  Q
    |   | |||| ||| ||   |||| || |  ||||| ||||||||| |  || || ||||||||| ||| ||||||||||||||| ||||||||  || |    
T  14669116 tcagattctccaaagtttcattct-aagtctttccaggttcaatctcatcctacattctttcctattcaatattagacatgttcaggcactcaacgacat 14669214  T
Q  198 ctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||||||||||||||||||||| ||||||||    
T  14669215 ctaaggttcaactcaaaagtcaaaatcacgaaatc 14669249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 2 - 223
Target Start/End: Original strand, 14665864 - 14666085
Alignment:
Q  2 caacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaa--ctagtcaattcgcgaggcgagggcctctactcgccatggcgagttcagg 99  Q
    ||||| ||||||||||||||||||||| |||||| ||||||||||||||  |||||    |||||||||||| |||||| |||||||| ||||||||||     
T  14665864 caactcgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaatactagtgc--tcgcgaggcgagagcctctgctcgccattgcgagttcag- 14665960  T
Q  100 tgtaactctcaaaacttg--ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacct 197  Q
    |   | |||| ||| ||   |||| || |  ||||| ||||||||| |  || || ||||||||||||| |||||| |||||||| ||||||||  || |    
T  14665961 tcagattctccaaagtttcattct-aagtctttccaggttcaatctcatcctacattctttcctaatcaatattagccatgttcaggcactcaacgacat 14666059  T
Q  198 ctaaggttcaactcaaaagtcaaaat 223  Q
    ||||||||||||||||||||||||||    
T  14666060 ctaaggttcaactcaaaagtcaaaat 14666085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 2 - 223
Target Start/End: Original strand, 14735377 - 14735598
Alignment:
Q  2 caacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaa--ctagtcaattcgcgaggcgagggcctctactcgccatggcgagttcagg 99  Q
    ||||| ||||||||||||||||||||| |||||| ||||||||||||||  |||||    |||||||||||| |||||| |||||||| ||||||||||     
T  14735377 caactcgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaatactagtgc--tcgcgaggcgagagcctctgctcgccattgcgagttcag- 14735473  T
Q  100 tgtaactctcaaaacttg--ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacct 197  Q
    |   | |||| ||| ||   |||| || |  ||||| ||||||||| |  || || ||||||||||||| |||||| |||||||| ||||||||  || |    
T  14735474 tcagattctccaaagtttcattct-aagtctttccaggttcaatctcatcctacattctttcctaatcaatattagccatgttcaggcactcaacgacat 14735572  T
Q  198 ctaaggttcaactcaaaagtcaaaat 223  Q
    ||||||||||||||||||||||||||    
T  14735573 ctaaggttcaactcaaaagtcaaaat 14735598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 60 - 232
Target Start/End: Complemental strand, 25476190 - 25476017
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaacttg--ttcttaaattattccaagttcaatcttaatctccaatctt 157  Q
    |||||||||||| ||||||||||| | ||||||||||||||   | || ||||| ||   |||| ||||  ||||| |||| |||| | ||| || ||||    
T  25476190 tcgcgaggcgagagcctctactcgtcgtggcgagttcaggtcagattc-caaaagtttcattctaaaatctttccaggttcgatctcattctacattctt 25476092  T
Q  158 tcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    || |||||||||||||||||||||| | |||||||||| ||||||| ||||||||||||||||||| || |||||    
T  25476091 tcataatcattattagacatgttcaggtactcaaaaacatctaaggatcaactcaaaagtcaaaatcacaaaatc 25476017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 129 - 232
Target Start/End: Original strand, 26687273 - 26687376
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||| ||||||||| |  || || ||||||||||||||||||||||||||| | |||||||||| | ||||||| ||||||||||||||||||| ||||    
T  26687273 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgtttaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacga 26687372  T
Q  229 aatc 232  Q
    ||||    
T  26687373 aatc 26687376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 129 - 222
Target Start/End: Original strand, 14572974 - 14573067
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    ||||| ||||||||| | ||| || ||||||||||||||||||||||||||||| |||||||||  | ||||||| ||||||||||||||||||    
T  14572974 ttccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaggcatctaaggatcaactcaaaagtcaaaa 14573067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 30030239 - 30030317
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||| ||||||||||||||||||||||  ||||||||  | ||||||||||||||||||||||||| ||||||||||    
T  30030239 tctttcgtaatcattattagacatgttcagacactcaaaggcatctaaggttcaactcaaaagtcaaatttacgaaatc 30030317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 154 - 222
Target Start/End: Complemental strand, 4588525 - 4588457
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    ||||||||||||| ||||||||||||||| |||||||||  | ||||||||||||||||||||||||||    
T  4588525 tctttcctaatcaatattagacatgttcaggcactcaaaggcatctaaggttcaactcaaaagtcaaaa 4588457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 232
Target Start/End: Complemental strand, 14576568 - 14576465
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||| ||||||| | | ||| || ||||| |||||||| |||||||||||||| |||||||||  | ||||||| ||||||||||||||||||| ||||    
T  14576568 ttccaggttcaatgtcattctacattcttttctaatcataattagacatgttcaggcactcaaaggcatctaaggatcaactcaaaagtcaaaatcacga 14576469  T
Q  229 aatc 232  Q
    ||||    
T  14576468 aatc 14576465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 232
Target Start/End: Original strand, 17488243 - 17488346
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||| ||||||||| |  || || ||||||||||||||||||||||||||||| |||||||||  | ||||||| ||| ||||||||||||| | ||||    
T  17488243 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaggcatctaaggatcatctcaaaagtcaaattcacga 17488342  T
Q  229 aatc 232  Q
    ||||    
T  17488343 aatc 17488346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 232
Target Start/End: Original strand, 17499725 - 17499828
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||| ||||||||| |  || || ||||||||||||||||||||||||||||| |||||||||  | ||||||| ||| ||||||||||||||| | ||    
T  17499725 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaggcatctaaggatcatctcaaaagtcaaaatcatga 17499824  T
Q  229 aatc 232  Q
    ||||    
T  17499825 aatc 17499828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 43842589 - 43842667
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||||||| ||| |||||||||| | ||||||| |||||| |||||||||||| | ||||||    
T  43842589 tctttcctaatcattattagacatgctcaggcactcaaaagcatctaaggatcaactaaaaagtcaaaatcatgaaatc 43842667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 232
Target Start/End: Complemental strand, 15877532 - 15877461
Alignment:
Q  161 taatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||| ||| ||| ||| |||| |||||||||||| |||||||||||||||||||||||||| |||||||||    
T  15877532 taatctttaataggcatcttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaactacgaaatc 15877461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 12852074 - 12851996
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||| ||||||||||||||| ||||||||   | ||||| ||| ||||||||||||||||| ||||||||    
T  12852074 tctttcctaatcaatattagacatgttcaggcactcaagggcatctaaagttaaactcaaaagtcaaaatcacgaaatc 12851996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 16809800 - 16809874
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||||||||||||||    |||||| |||||||||| | | |||||||||||||||||||||||| |||||||||    
T  16809800 tctttcctaatcattatta----tgttcaagcactcaaaagcatttaaggttcaactcaaaagtcaaaaatacgaaatc 16809874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 231
Target Start/End: Complemental strand, 17674256 - 17674209
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaat 231  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||    
T  17674256 gcactcaaaagcatctaaggttcaactcaaaagtcaaaattacgaaat 17674209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 210
Target Start/End: Original strand, 23275129 - 23275208
Alignment:
Q  131 ccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaact 210  Q
    ||||||||||||| |||||  || ||| |||||||||||||| |||| |||| |||||||||| | ||||||||||||||    
T  23275129 ccaagttcaatctcaatctaaaaacttgcctaatcattattatacatattcaggcactcaaaatcatctaaggttcaact 23275208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 226
Target Start/End: Original strand, 323002 - 323068
Alignment:
Q  160 ctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattac 226  Q
    |||||| ||| || |||| || |||||||||||| | ||||||||||||||||||||||||||||||    
T  323002 ctaatctttaataaacatcttaacgcactcaaaagcatctaaggttcaactcaaaagtcaaaattac 323068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 232
Target Start/End: Complemental strand, 23083067 - 23082993
Alignment:
Q  158 tcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||| |||||||||| | || |||||||||| | ||||||| ||||||||||||||||||| || |||||    
T  23083067 tcctaatcactattagacatatccaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacaaaatc 23082993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 37251029 - 37250932
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcagg 99  Q
    |||||| ||||||||||| || | |||| |||||  ||||  |||||||||| | ||| |||||||||||| |||||||||||| ||||||||||||||    
T  37251029 tcaactcgtgcgacaaaggtcacttttaacctaac-aaggtgttctgtaactgggcaactcgcgaggcgagagcctctactcgctatggcgagttcagg 37250932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 14572904 - 14572944
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  14572904 tcgcgaggcgagagcctctactcgccatggcgagttcaggt 14572944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 231
Target Start/End: Complemental strand, 3402647 - 3402600
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaat 231  Q
    |||||||||| | |||||||||||||||||||||||||||||| ||||    
T  3402647 gcactcaaaagcatctaaggttcaactcaaaagtcaaaattacaaaat 3402600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 210
Target Start/End: Complemental strand, 22109980 - 22109929
Alignment:
Q  159 cctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaact 210  Q
    |||||||||||||| ||||||||| |||||||||||| ||||| ||||||||    
T  22109980 cctaatcattattatacatgttcaggcactcaaaaacatctaaagttcaact 22109929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 321695 - 321657
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  321695 gcactcaaaaacatctaaggttcaactcaaaagtcaaaa 321657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 222
Target Start/End: Original strand, 12173223 - 12173261
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  12173223 gcactcaaaaacatctaaggttcaactcaaaagtcaaaa 12173261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 226
Target Start/End: Original strand, 12496692 - 12496734
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaattac 226  Q
    |||||||||| | ||||||||||||||||||||||||||||||    
T  12496692 gcactcaaaagcatctaaggttcaactcaaaagtcaaaattac 12496734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 226
Target Start/End: Original strand, 15060729 - 15060771
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaattac 226  Q
    |||||||||| | ||||||||||||||||||||||||||||||    
T  15060729 gcactcaaaagcatctaaggttcaactcaaaagtcaaaattac 15060771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 17524855 - 17524817
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  17524855 gcactcaaaaacatctaaggttcaactcaaaagtcaaaa 17524817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 226
Target Start/End: Complemental strand, 18383598 - 18383556
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaattac 226  Q
    |||||||||| | ||||||||||||||||||||||||||||||    
T  18383598 gcactcaaaagcatctaaggttcaactcaaaagtcaaaattac 18383556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 97
Target Start/End: Complemental strand, 606172 - 606135
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttca 97  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  606172 tcgcgaggcgaggacctctactcgccatggcgagttca 606135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 193
Target Start/End: Original strand, 13442687 - 13442724
Alignment:
Q  156 tttcctaatcattattagacatgttcacgcactcaaaa 193  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  13442687 tttcctaatcattattagacatgttcaggcactcaaaa 13442724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 95
Target Start/End: Complemental strand, 23083169 - 23083132
Alignment:
Q  58 attcgcgaggcgagggcctctactcgccatggcgagtt 95  Q
    |||||||||||||| |||||||||||||||||||||||    
T  23083169 attcgcgaggcgagagcctctactcgccatggcgagtt 23083132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 1982500 - 1982456
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaa 230  Q
    |||||||||| |||||||||||||||||||||| ||| |||||||    
T  1982500 actcaaaaacatctaaggttcaactcaaaagtccaaaatacgaaa 1982456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 4588650 - 4588602
Alignment:
Q  2 caacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaa 50  Q
    ||||| ||||||||||| ||||||||| |||||| ||||||||||||||    
T  4588650 caactcgtgcgacaaagctcgcatttaacctaaacaaggcattctgtaa 4588602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 14501594 - 14501666
Alignment:
Q  138 caatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaact 210  Q
    |||||| |||||  || ||| |||||||||||||| |||| |||| |||||||||| | ||||||||||||||    
T  14501594 caatctcaatctaaaaccttgcctaatcattattatacatattcaggcactcaaaatcatctaaggttcaact 14501666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 231
Target Start/End: Complemental strand, 19725578 - 19725546
Alignment:
Q  199 taaggttcaactcaaaagtcaaaattacgaaat 231  Q
    |||||||||||||||||||||||||||||||||    
T  19725578 taaggttcaactcaaaagtcaaaattacgaaat 19725546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 229
Target Start/End: Original strand, 23408882 - 23408914
Alignment:
Q  197 tctaaggttcaactcaaaagtcaaaattacgaa 229  Q
    |||||||||||||||||||||||||||||||||    
T  23408882 tctaaggttcaactcaaaagtcaaaattacgaa 23408914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 231
Target Start/End: Original strand, 11852008 - 11852055
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaat 231  Q
    |||||||||| | |||||||||||||| |||||| |||||||||||||    
T  11852008 gcactcaaaagcatctaaggttcaactgaaaagttaaaattacgaaat 11852055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 99
Target Start/End: Complemental strand, 22110155 - 22110116
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcagg 99  Q
    |||||||||||| |||||||||||| ||||||||||||||    
T  22110155 tcgcgaggcgagagcctctactcgctatggcgagttcagg 22110116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 3389638 - 3389600
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||| | ||||||||||||||||||||||||||    
T  3389638 gcactcaaaagcatctaaggttcaactcaaaagtcaaaa 3389600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 11298210 - 11298172
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||| | ||||||||||||||||||||||||||    
T  11298210 gcactcaaaagcatctaaggttcaactcaaaagtcaaaa 11298172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 233
Target Start/End: Complemental strand, 12037639 - 12037585
Alignment:
Q  179 ttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatcc 233  Q
    |||| |||||||||||| ||||||||| |||||| | |||||||| |||||||||    
T  12037639 ttcaggcactcaaaaacatctaaggtttaactcacatgtcaaaatcacgaaatcc 12037585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 14878186 - 14878148
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||||| | ||||||||||||||||||||||||    
T  14878186 gcactcaaaaacatataaggttcaactcaaaagtcaaaa 14878148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 226
Target Start/End: Original strand, 15051953 - 15051995
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaattac 226  Q
    |||||||||| | ||||||||||||||||||||| ||||||||    
T  15051953 gcactcaaaagcatctaaggttcaactcaaaagttaaaattac 15051995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 226
Target Start/End: Original strand, 16369845 - 16369887
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaattac 226  Q
    |||||||||| | |||||||||||||||||| |||||||||||    
T  16369845 gcactcaaaagcatctaaggttcaactcaaaggtcaaaattac 16369887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 26190690 - 26190652
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||| | ||||||||||||||||||||||||||    
T  26190690 gcactcaaaagcatctaaggttcaactcaaaagtcaaaa 26190652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 210
Target Start/End: Complemental strand, 606026 - 605945
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaact 210  Q
    ||||| ||||||||| |||||  ||  || |||||||||||||| |||  |||| |||||||||| | ||||||||||||||    
T  606026 ttccaggttcaatctcaatctagaaaattgcctaatcattattatacacattcaggcactcaaaatcatctaaggttcaact 605945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 230
Target Start/End: Original strand, 16690646 - 16690679
Alignment:
Q  197 tctaaggttcaactcaaaagtcaaaattacgaaa 230  Q
    |||||||||||||||||||||||||| |||||||    
T  16690646 tctaaggttcaactcaaaagtcaaaaatacgaaa 16690679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 230
Target Start/End: Original strand, 16697219 - 16697252
Alignment:
Q  197 tctaaggttcaactcaaaagtcaaaattacgaaa 230  Q
    |||||||||||||||||||||||||| |||||||    
T  16697219 tctaaggttcaactcaaaagtcaaaaatacgaaa 16697252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 97
Target Start/End: Complemental strand, 16839476 - 16839439
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttca 97  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  16839476 tcgcgaggcgagcgcctctactcgctatggcgagttca 16839439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 222
Target Start/End: Original strand, 3834090 - 3834126
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    ||||||| || ||||||||||||||||||||||||||    
T  3834090 actcaaagacatctaaggttcaactcaaaagtcaaaa 3834126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 11594829 - 11594785
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaa 230  Q
    |||||||| | |||||||||||||||||||||| ||| |||||||    
T  11594829 actcaaaagcatctaaggttcaactcaaaagtccaaaatacgaaa 11594785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 14576638 - 14576598
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||| ||||||||||||| ||||| ||||||||    
T  14576638 tcgcgaggcgagagcctctactcgccgtggcgtgttcaggt 14576598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 20698242 - 20698202
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  20698242 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 20698202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 23412899 - 23412827
Alignment:
Q  138 caatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaact 210  Q
    |||||| |||||  || ||| |||||||||| ||| |||| |||| |||||||||| | ||||||||||||||    
T  23412899 caatctcaatctaaaaacttgcctaatcatttttatacatattcaggcactcaaaatcatctaaggttcaact 23412827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 26687202 - 26687242
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  26687202 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 26687242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 45797638 - 45797710
Alignment:
Q  138 caatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaact 210  Q
    |||||| |||||  || ||| |||||||||||||| |||| |||| |||||||||| | ||||| ||||||||    
T  45797638 caatctcaatctaaaaacttacctaatcattattatacatattcaggcactcaaaatcatctaaagttcaact 45797710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 159; Significance: 9e-85; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 2507 - 2262
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  2507 tcaacttgtgcgacaaagatcgcatttatcctaaacaaggcattctgtaactagtcaattcgcgaggcaatggcctctactcgccatggcgagttcaggt 2408  T
Q  101 gtaactctcaaaact-tgttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
     |||||| || || |  |||||| || || |||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| | |    
T  2407 ataactcccacaagtacgttctt-aactaatccaggttcaatctcaatctccaatctttcctaatcattattagacatgttcaggcactcaaaaacattt 2309  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    |||| |||||||||||||||||||||||||||  |||||||||||||    
T  2308 aaggatcaactcaaaagtcaaaattacgaaatttggatagctctctg 2262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 159; Significance: 9e-85; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 22921731 - 22921485
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| ||||||||||||||||||||| || ||| |||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||| ||    
T  22921731 tcaactcgtgcgacaaagatcgcatttaacccaaacaaggcattctgtaactaggcagttcgcgaggcgagagcctctactcgccatggcgagttcaagt 22921632  T
Q  101 gtaactctcaaaactt-gttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
     |||||||||||| || ||||||||| ||||||  ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  22921631 ctaactctcaaaaattcgttcttaaactattcctggttcaatctcaatctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatct 22921532  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    ||||||||||||||| |||||||||||||||||  || |||||||||    
T  22921531 aaggttcaactcaaaggtcaaaattacgaaatcatgacagctctctg 22921485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 52927844 - 52927599
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| ||||||||||||||||||||| |||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  52927844 tcaactcgtgcgacaaagatcgcatttaacctaac-aaggcattctgtaactggtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 52927746  T
Q  101 gtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
     ||||| | |||| ||  |||  ||||  ||||| ||||||||| | ||||||||||||| |||||||||||||||||||||| |||||||||||| |||    
T  52927745 ctaactttaaaaaattcattccaaaatctttccaggttcaatctcattctccaatctttcataatcattattagacatgttcaggcactcaaaaacatct 52927646  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||    
T  52927645 aagggtcaactcaaaagtcaaaattacgaaatctggatagctctctg 52927599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 22237887 - 22238129
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| |||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  22237887 tcaactcgtgcgaaaaagatcgcatttaacctaaacaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaagt 22237986  T
Q  101 gtaactctcaaaacttgttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctcta 200  Q
    | ||||| ||||| |  |||  ||||  ||||| ||| ||||| | ||||||||||||||||| |||||||||||||||||| |||||||||||  ||||    
T  22237987 gcaactcacaaaattcattccaaaatctttccaggtttaatctcattctccaatctttcctaaccattattagacatgttcaggcactcaaaaatatcta 22238086  T
Q  201 aggttcaactcaaaagtcaaaattacgaaatccggatagctct 243  Q
    ||| |||||||||||||||||||||||||||  ||||||||||    
T  22238087 aggatcaactcaaaagtcaaaattacgaaatatggatagctct 22238129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 33681266 - 33681512
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| ||| ||||||||||||||||| | |||  |||||| ||||||||| |  ||||||||||||||| |||||| |||||||||||||||||||||    
T  33681266 tcaactcgtgtgacaaagatcgcatttaacataagcaaggcactctgtaactgggtaattcgcgaggcgagagcctctgctcgccatggcgagttcaggt 33681365  T
Q  101 gtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
    | ||||| ||||| ||  |||| ||||  ||||| ||||||||| | ||||||||||||||||||||||||||||||| |||| | |||||||||| |||    
T  33681366 gcaactcacaaaaattcattctaaaatctttccaggttcaatctcattctccaatctttcctaatcattattagacatattcaggaactcaaaaacatct 33681465  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    |||| |||||||||||||||||||||||||||| || ||||||||||    
T  33681466 aaggatcaactcaaaagtcaaaattacgaaatctgggtagctctctg 33681512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 9 - 231
Target Start/End: Original strand, 20637115 - 20637339
Alignment:
Q  9 tgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactct 108  Q
    ||||||||||||||| |||| |||||| ||| ||||||||||||  | |  |||||||||||| ||||||||||||||||||||||||||||| |||||     
T  20637115 tgcgacaaagatcgcttttaacctaaacaagacattctgtaactgattagctcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaactca 20637214  T
Q  109 caaaactt-gttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactc-aaaaacctctaaggttc 206  Q
    ||||| || ||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||| ||| ||  | |||||| |||||| || |||||||    
T  20637215 caaaaattcgttcttaaactattccaggttcaatcttaatctccaatctttcctaatcatcattatacaagtctaggcactcaaaaaacatccaaggttc 20637314  T
Q  207 aactcaaaagtcaaaattacgaaat 231  Q
    |||| ||| ||||||||||||||||    
T  20637315 aacttaaaggtcaaaattacgaaat 20637339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 20248534 - 20248780
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    ||||||||||||||||  |||||||||| |||||| ||||||||||||||||||| |  |||||||||||  ||||||||||||||||||||||||||||    
T  20248534 tcaacttgtgcgacaagaatcgcatttaacctaaataaggcattctgtaactagttagctcgcgaggcgatagcctctactcgccatggcgagttcaggt 20248633  T
Q  101 gtaactctcaaaacttgttcttaaattat-tccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
      |  || ||||| ||  |  |||| | | |||| ||||||||| | ||||| |||||||||||||||||||||||||||||| |||||||||||| |||    
T  20248634 tcagttcacaaaaattcattctaaagtctctccaggttcaatctcattctccgatctttcctaatcattattagacatgttcaggcactcaaaaacatct 20248733  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    | || |||||||||||||||||||| ||||||  || ||||||||||    
T  20248734 atggatcaactcaaaagtcaaaatttcgaaatttgggtagctctctg 20248780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 8 - 232
Target Start/End: Complemental strand, 35981543 - 35981319
Alignment:
Q  8 gtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactc 107  Q
    |||||||||||||||| |||| |||||| ||||||||||||||||||| |  |||||||||||| |||||||||| |||||||||||||||||| |||||    
T  35981543 gtgcgacaaagatcgcttttaacctaaacaaggcattctgtaactagttagctcgcgaggcgagagcctctactcaccatggcgagttcaggtgcaactc 35981444  T
Q  108 tca-aaacttgttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttc 206  Q
     || ||| | ||||||||| ||| ||| ||||||||| ||||| ||||||||||||||||| || | ||| ||||| |||||||||||| || |||||||    
T  35981443 acataaattcgttcttaaactatcccaggttcaatctcaatctacaatctttcctaatcatcatcatacaagttcaggcactcaaaaacatc-aaggttc 35981345  T
Q  207 aactcaaaagtcaaaattacgaaatc 232  Q
     ||| ||| ||||||| ||| |||||    
T  35981344 gacttaaaggtcaaaactacaaaatc 35981319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 60 - 246
Target Start/End: Original strand, 21754352 - 21754538
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaacttgttcttaaattattccaagttcaatcttaatctccaatctttc 159  Q
    |||||||||||| |||||| |||||||||||||||||||||  |  || ||||| |  |||| || |  | ||| |||||||||   |||||||||||||    
T  21754352 tcgcgaggcgagagcctctgctcgccatggcgagttcaggttcagttcacaaaattcattctaaagtcttcccaggttcaatctctttctccaatctttc 21754451  T
Q  160 ctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||| ||||||||| |||||||||||||    
T  21754452 ctaatcattattagacatgttcaggcactcaaaaacatctaaggatcaactcaaaagtcaaaaatacgaaatctggatagctctctg 21754538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 8 - 232
Target Start/End: Complemental strand, 28194305 - 28194080
Alignment:
Q  8 gtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactc 107  Q
    |||||||||||||||||| || |||||| ||| |||| ||||| | |  |  |||||||||||| ||||||||| ||||||||||||||||||| |||||    
T  28194305 gtgcgacaaagatcgcatgtaacctaaacaagacattttgtaaatgggtagctcgcgaggcgagagcctctacttgccatggcgagttcaggtgcaactc 28194206  T
Q  108 tcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttc 206  Q
     ||||  ||  |||||||| |||| || ||||||||| ||||| ||||||||||||||||| || | ||| ||||| |||||||||||| || |||||||    
T  28194205 acaaagattcattcttaaactatttcaggttcaatctcaatctacaatctttcctaatcatcatcatacaagttcaggcactcaaaaacatccaaggttc 28194106  T
Q  207 aactcaaaagtcaaaattacgaaatc 232  Q
     ||| ||| ||||||| ||| |||||    
T  28194105 gacttaaaggtcaaaactacaaaatc 28194080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 118 - 246
Target Start/End: Original strand, 43697735 - 43697863
Alignment:
Q  118 ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagt 217  Q
    |||||||| ||||||| ||| ||||| |||||  ||||||| |||||||| | |||||||||||| |||||||||||| |||||||||||||| ||||||    
T  43697735 ttcttaaactattccaggttaaatctcaatctagaatcttttctaatcataaatagacatgttcaggcactcaaaaacatctaaggttcaacttaaaagt 43697834  T
Q  218 caaaattacgaaatccggatagctctctg 246  Q
    |||||||||||||||  || |||||||||    
T  43697835 caaaattacgaaatcatgacagctctctg 43697863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 128 - 232
Target Start/End: Complemental strand, 22355921 - 22355817
Alignment:
Q  128 attccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacg 227  Q
    |||||| ||||||||| |  || || ||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||| |    
T  22355921 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaattatg 22355822  T
Q  228 aaatc 232  Q
    |||||    
T  22355821 aaatc 22355817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 128 - 232
Target Start/End: Complemental strand, 22357607 - 22357503
Alignment:
Q  128 attccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacg 227  Q
    |||||| ||||||||| |  || || ||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||| |    
T  22357607 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaattatg 22357508  T
Q  228 aaatc 232  Q
    |||||    
T  22357507 aaatc 22357503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 27250450 - 27250372
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||| |||||||||||    
T  27250450 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaatattacgaaatc 27250372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 60 - 232
Target Start/End: Original strand, 433323 - 433496
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatcttt 158  Q
    |||||||||||| |||||| |||||||||||||||||||||   | || ||||  ||  |||| ||||  ||||| ||||||||| | ||| || |||||    
T  433323 tcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctttccaggttcaatctcattctacattcttt 433422  T
Q  159 cctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||| ||||||||||||  ||||||||| | ||||||| ||||||||||||||||||| ||| ||||    
T  433423 cctaatcattaatagacatgttcagacactcaaaagcatctaaggatcaactcaaaagtcaaaatcacggaatc 433496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 232
Target Start/End: Complemental strand, 21301245 - 21301170
Alignment:
Q  157 ttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||||||| ||||||||    
T  21301245 ttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacgaaatc 21301170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 129 - 232
Target Start/End: Original strand, 22532655 - 22532758
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||| ||||||||| |  || || ||||||||||||||||||||||||||||| |||||||||| | ||||||| |||| |||||||||||||| ||||    
T  22532655 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaaatcaaaagtcaaaatcacga 22532754  T
Q  229 aatc 232  Q
    ||||    
T  22532755 aatc 22532758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 129 - 232
Target Start/End: Original strand, 34510166 - 34510269
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||| ||||||||| |  || || ||||||||||||||||||||||||||||| |||||||||| | ||||||  ||||||||||||||||||| ||||    
T  34510166 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagaatcaactcaaaagtcaaaatcacga 34510265  T
Q  229 aatc 232  Q
    ||||    
T  34510266 aatc 34510269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 38801112 - 38801034
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||||||||||| ||||||||| || ||||| |||||||||||||||||||| || ||||||    
T  38801112 tctttcctaatcattattagacatgttcaggcactcaaagacatctaaagttcaactcaaaagtcaaaaatatgaaatc 38801034  T

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Target: chr1; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 154 - 231
Target Start/End: Original strand, 20135598 - 20135675
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaat 231  Q
    ||||||||||||||||||||||||||||| |||||||||| | ||||||| | |||||||||||||||||||| ||||    
T  20135598 tctttcctaatcattattagacatgttcaagcactcaaaagcatctaaggataaactcaaaagtcaaaattacaaaat 20135675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 232
Target Start/End: Complemental strand, 20846966 - 20846862
Alignment:
Q  128 attccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacg 227  Q
    |||||| ||||||||| |  || || |||| |||||||||||||||||||||||| |||||||||| | ||||||| |||||||||| |||||||||||     
T  20846966 attccaggttcaatctcatcctacattcttacctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaggtcaaaattaca 20846867  T
Q  228 aaatc 232  Q
    |||||    
T  20846866 aaatc 20846862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 49261598 - 49261690
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgag 93  Q
    |||||| |||||||||||||||| |||| |||||| |||||||||||||||| || |  |||||||||||| ||||||| |||||||||||||    
T  49261598 tcaactcgtgcgacaaagatcgcttttaacctaaacaaggcattctgtaactggttagctcgcgaggcgagagcctctattcgccatggcgag 49261690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 135 - 225
Target Start/End: Original strand, 20918993 - 20919083
Alignment:
Q  135 gttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaatta 225  Q
    ||||||||| | ||| || ||||||||||||||||||||||||||||| |||||||||| | | ||||| |||||||||| ||||||||||    
T  20918993 gttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatgtaaggatcaactcaaaggtcaaaatta 20919083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 226
Target Start/End: Original strand, 21027054 - 21027152
Alignment:
Q  128 attccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattac 226  Q
    |||||| ||||||||| |  || || |||| |||||||||||||||||||||||| |||||||||| | ||||||| |||||||||| |||||||||||    
T  21027054 attccaggttcaatctcatcctacattcttacctaatcattattagacatgttcaagcactcaaaagcatctaaggatcaactcaaaggtcaaaattac 21027152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 156 - 232
Target Start/End: Complemental strand, 22354280 - 22354204
Alignment:
Q  156 tttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||| ||||||||||| |||||||||| | | ||||||||||||||||||||||||| || |||||    
T  22354280 tttcctaatcattataagacatgttcaagcactcaaaagcatataaggttcaactcaaaagtcaaaatcacaaaatc 22354204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 179 - 232
Target Start/End: Original strand, 21714983 - 21715036
Alignment:
Q  179 ttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  21714983 ttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaattacgaaatc 21715036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 232
Target Start/End: Complemental strand, 22468400 - 22468329
Alignment:
Q  161 taatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||| ||| ||| ||| |||| |||||||||||| |||||||||||||||||||||||||| |||||||||    
T  22468400 taatctttaataggcatcttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaactacgaaatc 22468329  T

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Target: chr1; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 99
Target Start/End: Original strand, 26065205 - 26065295
Alignment:
Q  8 gtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcagg 99  Q
    |||||||||||||||||   | |||||| |||| ||||||||||| | ||| |||||||||||| |||||||||||| ||||||||||||||    
T  26065205 gtgcgacaaagatcgcaaa-accctaaacaaggtattctgtaactgggcaactcgcgaggcgagagcctctactcgctatggcgagttcagg 26065295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 232
Target Start/End: Complemental strand, 50210018 - 50209846
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaactt--gttcttaaattattccaagttcaatcttaatctccaatctt 157  Q
    |||||||||||| |||||| |||||| ||||||||||||||   | |  ||||| ||   ||| |||||  ||||| ||||||||| | ||| || ||||    
T  50210018 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaattccaaaagtttcattc-taaatctttccaggttcaatctcattctacattctt 50209920  T
Q  158 tcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||||||| |||||||||  | | ||| | ||||||||||||||||||| || |||||    
T  50209919 tcctaatcattattagacatgttcaggcactcaaaggcatataa-gatcaactcaaaagtcaaaatcacaaaatc 50209846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 16758911 - 16759005
Alignment:
Q  2 caacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcag 98  Q
    ||||| |||||||||||||||||   ||||||||  || |||||||||||||| ||| |||||||| ||||||||||||| || |||||||||||||    
T  16758911 caactcgtgcgacaaagatcgcaaa-atcctaaacgag-cattctgtaactaggcaactcgcgaggtgagggcctctacttgctatggcgagttcag 16759005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 231
Target Start/End: Complemental strand, 3472607 - 3472560
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaat 231  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||    
T  3472607 gcactcaaaagcatctaaggttcaactcaaaagtcaaaattacgaaat 3472560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 232
Target Start/End: Complemental strand, 20091180 - 20091106
Alignment:
Q  158 tcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||| ||||||||||||||| ||| |||||  | ||||||||| |||||||||||||||| || ||||||    
T  20091180 tcctaatcaatattagacatgttcaggcaatcaaaggcatctaaggtttaactcaaaagtcaaaaataagaaatc 20091106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 233
Target Start/End: Complemental strand, 8761314 - 8761265
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatcc 233  Q
    |||||||||| | |||||||||||||||||||||| ||||||||||||||    
T  8761314 gcactcaaaagcatctaaggttcaactcaaaagtccaaattacgaaatcc 8761265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 231
Target Start/End: Complemental strand, 18181826 - 18181755
Alignment:
Q  160 ctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaat 231  Q
    |||||||||| || |||| || | |||||||||| | |||||||||||||||||||||||||| ||| ||||    
T  18181826 ctaatcattaataaacatctttaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaatacaaaat 18181755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 226
Target Start/End: Complemental strand, 22432464 - 22432422
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaattac 226  Q
    |||||||||| | ||||||||||||||||||||||||||||||    
T  22432464 gcactcaaaagcatctaaggttcaactcaaaagtcaaaattac 22432422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 22831059 - 22831021
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  22831059 gcactcaaaaacatctaaggttcaactcaaaagtcaaaa 22831021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 42864892 - 42864854
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  42864892 gcactcaaaaacatctaaggttcaactcaaaagtcaaaa 42864854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 232
Target Start/End: Original strand, 16759118 - 16759215
Alignment:
Q  135 gttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||| |||||  || ||| |||||||||||||| || |||| | |||||||||||| |||||||||| ||| ||  ||||||| ||| |||||    
T  16759118 gttcaatctcaatctaaaaacttgcctaatcattattatacgtgtttaggcactcaaaaacatctaaggttcgacttaagggtcaaaactacaaaatc 16759215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 21787746 - 21787685
Alignment:
Q  161 taatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    ||||| |||||| |||| || | |||||||||||| |||||||||||||||| |||||||||    
T  21787746 taatctttattaaacatctttaggcactcaaaaacatctaaggttcaactcacaagtcaaaa 21787685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 98
Target Start/End: Complemental strand, 21861372 - 21861335
Alignment:
Q  61 cgcgaggcgagggcctctactcgccatggcgagttcag 98  Q
    |||||||||||||||||||||||| |||||||||||||    
T  21861372 cgcgaggcgagggcctctactcgctatggcgagttcag 21861335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 98
Target Start/End: Original strand, 20918870 - 20918956
Alignment:
Q  11 cgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaat-tcgcgaggcgagggcctctactcgccatggcgagttcag 98  Q
    |||||||||||||||| | |||||| |||||||||| |||| |  |||  |||||||||||| |||||| |||||||||||||||||||    
T  20918870 cgacaaagatcgcattcaacctaaa-aaggcattctttaac-acacaagctcgcgaggcgagagcctctgctcgccatggcgagttcag 20918956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 35260935 - 35260852
Alignment:
Q  8 gtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcga 92  Q
    |||||||||||||||||   |||||||  |||| ||| ||||||| |  || ||||||||||||||||||||||||| |||||||    
T  35260935 gtgcgacaaagatcgcaaa-atcctaagcaaggtattttgtaactgggaaactcgcgaggcgagggcctctactcgctatggcga 35260852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 38801197 - 38801157
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  38801197 tcgcgaggcgagagcctctactcgccgtggcgagttcaggt 38801157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 222
Target Start/End: Original strand, 21162120 - 21162207
Alignment:
Q  135 gttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    ||||||||| | ||| || ||||||| |||| ||||||||| | |||| |||||||||| | | ||||| ||| ||||||||||||||    
T  21162120 gttcaatctcattctacattctttcccaatcgttattagacttattcaggcactcaaaagcatttaagggtcatctcaaaagtcaaaa 21162207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 226
Target Start/End: Original strand, 21023076 - 21023118
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaattac 226  Q
    |||||||||| | | ||||||||||||||||||||||||||||    
T  21023076 gcactcaaaagcatttaaggttcaactcaaaagtcaaaattac 21023118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 100
Target Start/End: Complemental strand, 22354376 - 22354338
Alignment:
Q  62 gcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  22354376 gcgaggcgagagcctctactcgccgtggcgagttcaggt 22354338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 17678277 - 17678232
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaat 231  Q
    |||||||| | |||||||||||||||||||||| |||||| |||||    
T  17678277 actcaaaagcatctaaggttcaactcaaaagtccaaattatgaaat 17678232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 232
Target Start/End: Original strand, 21342564 - 21342637
Alignment:
Q  159 cctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||||||||| |||| ||||  ||||||||| | |||||||||||||| ||  ||||||| ||| |||||    
T  21342564 cctaatcattattatacatattcagacactcaaaatcatctaaggttcaacttaagggtcaaaactacaaaatc 21342637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 232
Target Start/End: Original strand, 21347429 - 21347502
Alignment:
Q  159 cctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||||||||| |||| ||||  ||||||||| | |||||||||||||| ||  ||||||| ||| |||||    
T  21347429 cctaatcattattatacatattcagacactcaaaatcatctaaggttcaacttaagggtcaaaactacaaaatc 21347502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 232
Target Start/End: Complemental strand, 21895961 - 21895864
Alignment:
Q  135 gttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||| |||||  || |||||||||||||||||| || |||||| ||||||| || | ||||| | |||||| ||  ||||||| ||| |||||    
T  21895961 gttcaatctcaatctaaaaactttcctaatcattattatacttgttcaggcactcataatcatctaaagatcaacttaagggtcaaaactacaaaatc 21895864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 21162081 - 21162121
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||| |||||| ||||||||||||||| |||||    
T  21162081 tcgcgaggcgagagcctctgctcgccatggcgagtacaggt 21162121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 222
Target Start/End: Complemental strand, 23818989 - 23818953
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||| | ||||||||||||||||||||||||||    
T  23818989 actcaaaagcatctaaggttcaactcaaaagtcaaaa 23818953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 99
Target Start/End: Complemental strand, 41049841 - 41049809
Alignment:
Q  67 gcgagggcctctactcgccatggcgagttcagg 99  Q
    |||||||||||||||||| ||||||||||||||    
T  41049841 gcgagggcctctactcgctatggcgagttcagg 41049809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 222
Target Start/End: Complemental strand, 45489433 - 45489397
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||| | ||||||||||||||||||||||||||    
T  45489433 actcaaaagcatctaaggttcaactcaaaagtcaaaa 45489397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 158; Significance: 4e-84; HSPs: 69)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 47832066 - 47832311
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| || ||||||||||| |||||| |||||| || ||||||||||||| | || ||||||||||||||||||||||||||||||||||||||| ||    
T  47832066 tcaactcgtccgacaaagatcacatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcatgt 47832165  T
Q  101 gtaactctcaaaacttgttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctcta 200  Q
    ||||||||||||| | ||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  47832166 gtaactctcaaaattcgttcttaaactattccagattcaatcttaatctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatcta 47832265  T
Q  201 aggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    |||||||||| ||| |||||||||||||||||  |||| |||||||    
T  47832266 aggttcaacttaaaggtcaaaattacgaaatcatgatacctctctg 47832311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 68003 - 68249
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||||||| ||||||||||| |||||| |||||||||||||||| || |  |||||||||||| |||||||||||||||||||||||||  |    
T  68003 tcaacttgtgcgacaaggatcgcatttaacctaaacaaggcattctgtaactggttagctcgcgaggcgagagcctctactcgccatggcgagttcatct 68102  T
Q  101 gtaactctcaaaactt-gttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
    ||||||| || || || ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| ||||| | |    
T  68103 gtaactcccacaagtttgttcttaaattattccaggttcaatctcaatctccaatctttcctaatcattattagacatattcaggcactcgaaaacattt 68202  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    |||| |||||||||||||||||||||||||||| ||||| |||||||    
T  68203 aaggatcaactcaaaagtcaaaattacgaaatctggatatctctctg 68249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 18005905 - 18006144
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18005905 tcaacttgtgcgacaaagatcgcatt-atcctaaacaaggcattttgtaactagtcaattcgcgaggcgagggcctctagtcgccatggcgagttcaggt 18006003  T
Q  101 gtaactctcaaaactt-gttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
     |||||| || || || ||||||||| ||||  | ||||      |||||| |||||||| |||||||||||||||||||||| |||||||||||| |||    
T  18006004 ataactcccacaagttcgttcttaaactattttaggttc------aatctcaaatctttcataatcattattagacatgttcaggcactcaaaaacatct 18006097  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||    
T  18006098 aaggatcaactcaaaagtcaaaattacgaaatctggatagctctctg 18006144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 16219579 - 16219348
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||||||||||||||||||| |||||  |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||    
T  16219579 tcaacttgtgcgacaaagatcgcatttaacctaac-aaggcattctgtaactagacaactcgcgaggcgagggcctctactcgccatggcgagttcacgt 16219481  T
Q  101 gtaactctcaaaactt-gttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
    ||||||| ||||| ||  |||||||| ||||||| ||||||||| |||||  ||||||||||||||||||||| ||| ||| |  ||||||||||| |||    
T  16219480 gtaactcccaaaaattcattcttaaactattccaggttcaatctcaatctaaaatctttcctaatcattattatacaagtttagacactcaaaaacatct 16219381  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||| ||| |||||||||| ||||||    
T  16219380 aaggttcaacttaaaggtcaaaattatgaaatc 16219348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 8 - 246
Target Start/End: Original strand, 44014438 - 44014677
Alignment:
Q  8 gtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactc 107  Q
    ||||||||| ||||||||||| |||||| |||||||||||||||  || |  |||||||||||| |||||||||| |||||||||||||||||| ||||     
T  44014438 gtgcgacaatgatcgcatttaacctaaacaaggcattctgtaaccggttagctcgcgaggcgagagcctctactcaccatggcgagttcaggtgcaacta 44014537  T
Q  108 tcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttc 206  Q
     ||||| ||  |||| ||||  ||||| ||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||  ||    
T  44014538 acaaaaattcattctaaaatctttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaagtatc 44014637  T
Q  207 aactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  44014638 aactcaaaagtcaaaattacgaaatctggatagctctctg 44014677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 9 - 232
Target Start/End: Original strand, 16324272 - 16324495
Alignment:
Q  9 tgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactct 108  Q
    |||||||| |||| |||||| |||||  |||||||||||||||| | || ||||| ||||||||||||||||||||||||||||||||   | |||||||    
T  16324272 tgcgacaaggatcacatttaacctaac-aaggcattctgtaactgggcagttcgcaaggcgagggcctctactcgccatggcgagttccaatctaactct 16324370  T
Q  109 caaaactt-gttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttca 207  Q
    ||||| || ||||||||| ||||||| ||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||| |  ||||||||    
T  16324371 caaaaattcgttcttaaactattccaggttcaatctcaaactccaatctttcctaatcattattagacatgttcaagcactcaaaaacattcaaggttca 16324470  T
Q  208 actcaaaagtcaaaattacgaaatc 232  Q
    ||| ||| |||||||||||||||||    
T  16324471 acttaaaggtcaaaattacgaaatc 16324495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 9389559 - 9389313
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| ||| |||||||||||| |||| |||||| ||||||||||||||||  | |  |||||||||||| |||||||||||||||||||||||||| |    
T  9389559 tcaactcgtgtgacaaagatcgcttttaacctaaacaaggcattctgtaactgcttagctcgcgaggcgagagcctctactcgccatggcgagttcagct 9389460  T
Q  101 gtaactctcaaaactt-gttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
    ||||||| || || || ||||||||| ||||||| ||||||||| ||||| ||||||||||||||||| |||| ||| || ||  ||||||||||| ||     
T  9389459 gtaactcacataaattcgttcttaaactattccaggttcaatctcaatctacaatctttcctaatcatcattatacaagtccagacactcaaaaacatcc 9389360  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    ||||||||||| ||||||||||| ||| ||||| |||||||||||||    
T  9389359 aaggttcaacttaaaagtcaaaagtacaaaatctggatagctctctg 9389313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 810993 - 810747
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||| ||||||||||||||||||| | |||| |||||||| ||||||      | |||||||||||| ||||||||||||||||||||||||||||    
T  810993 tcaacttgcgcgacaaagatcgcatttaacttaaacaaggcattttgtaacataagtactcgcgaggcgagagcctctactcgccatggcgagttcaggt 810894  T
Q  101 gtaactctcaaaacttgttcttaaattatt-ccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
      |  || ||||| ||  |  |||||| || ||| ||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||| |||    
T  810893 acagttcacaaaaattcattctaaattctttccaggttcaatcttattctccaatctttcctaatcattattagatatgttcaggcactcaaaaacatct 810794  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    |||| |||||||||||||||||||||||||||| |||| ||||||||    
T  810793 aaggatcaactcaaaagtcaaaattacgaaatctggatggctctctg 810747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 22073174 - 22073383
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| ||||||||| ||||||||||| |||||  ||| |||||||||||| |  || |||||||||||||||||||||||||||||||||||||||||    
T  22073174 tcaactcgtgcgacaaggatcgcatttaacctaacaaag-cattctgtaactgggtaactcgcgaggcgagggcctctactcgccatggcgagttcaggt 22073272  T
Q  101 gtaactctcaaaact-tgttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
    ||||||| ||||| |   |||||||| ||||| | ||||||||| | |||  ||||||| ||||||||||||| ||||||||| ||||||||||||||||    
T  22073273 gtaactcccaaaaatccattcttaaactattctaggttcaatctcattctagaatcttttctaatcattattacacatgttcaggcactcaaaaacctct 22073372  T
Q  200 aaggttcaact 210  Q
    ||||| |||||    
T  22073373 aaggtccaact 22073383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 2 - 193
Target Start/End: Complemental strand, 12255652 - 12255462
Alignment:
Q  2 caacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtg 101  Q
    ||||| ||| |||||||||||||   |||||||| ||| |||||||||||| |  || |||||||||||| |||||||||||| ||||||||||||||||    
T  12255652 caactcgtgtgacaaagatcgcaaa-atcctaaacaag-cattctgtaactgggaaactcgcgaggcgagagcctctactcgctatggcgagttcaggtg 12255555  T
Q  102 taactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaa 193  Q
    |||||| ||||| ||  |||||||| ||||||| ||||||||| |||||  ||||||||||||||||||||| ||||||||| ||||||||||    
T  12255554 taactcccaaaaattcattcttaaactattccaggttcaatctcaatctagaatctttcctaatcattattatacatgttcaagcactcaaaa 12255462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 8 - 246
Target Start/End: Complemental strand, 17061815 - 17061578
Alignment:
Q  8 gtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactc 107  Q
    |||||||||||||||||   |||||||| ||| |||||||||| |||   | |||||||||||| ||||||||||||||| ||||||||||||   | ||    
T  17061815 gtgcgacaaagatcgcaaa-atcctaaacaag-cattctgtaaataggtcactcgcgaggcgagagcctctactcgccatcgcgagttcaggtcagattc 17061718  T
Q  108 tcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttc 206  Q
    |||||  ||  |||| ||||   |||| ||||||||| | ||| || ||||||||||||||||||| ||||||||| |||||||||| | ||||||| ||    
T  17061717 tcaaagttttattctaaaatctatccaggttcaatctcattctacattctttcctaatcattattaaacatgttcaggcactcaaaagcatctaaggatc 17061618  T
Q  207 aactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    ||||||||||||||||| |||||||  |||||||||||||    
T  17061617 aactcaaaagtcaaaatcacgaaatttggatagctctctg 17061578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 8 - 245
Target Start/End: Complemental strand, 12756571 - 12756336
Alignment:
Q  8 gtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactc 107  Q
    |||||||||||||||||   |||||||| ||||| || ||||| | | ||| |||||||||||| ||||||||||||||||| ||||||||||     ||    
T  12756571 gtgcgacaaagatcgcaaa-atcctaaacaaggcttt-tgtaattgggcaactcgcgaggcgagagcctctactcgccatggtgagttcaggtcagcttc 12756474  T
Q  108 tcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttc 206  Q
      |||| ||  ||||||||| || ||| ||||||||| | ||| || ||||||||||||||||||| ||||||||| |||||||||| | ||||||| ||    
T  12756473 caaaaagttcattcttaaataat-ccaggttcaatctcattctacattctttcctaatcattattaaacatgttcaggcactcaaaagcatctaaggatc 12756375  T
Q  207 aactcaaaagtcaaaattacgaaatccggatagctctct 245  Q
    |||||||||||||||||||||||||  ||||||||||||    
T  12756374 aactcaaaagtcaaaattacgaaatttggatagctctct 12756336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 16056586 - 16056767
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| |||| |||||||||||||||| |||||  |||||||||||||||| |  || |||||||||||| |||||||||||| |||||||||||||||    
T  16056586 tcaactcgtgctacaaagatcgcatttaacctaac-aaggcattctgtaactgggtaactcgcgaggcgagagcctctactcgctatggcgagttcaggt 16056684  T
Q  101 gtaactctcaaaact-tgttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttca 182  Q
    |||| || ||||| |   |||||||| ||||||| ||||||||| |||||  ||||||||||| ||||||||| |||||||||    
T  16056685 gtaattcccaaaaatccattcttaaactattccaggttcaatctcaatctaaaatctttcctattcattattatacatgttca 16056767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 2 - 193
Target Start/End: Complemental strand, 2279979 - 2279789
Alignment:
Q  2 caacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtg 101  Q
    ||||| ||| |||||||||||||   |||||||| ||| |||||| ||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||    
T  2279979 caactcgtgtgacaaagatcgcaaa-atcctaaacaag-cattctataactaggcaactcgcgaggcgagggcctctactcgctatggcgagttcaggtg 2279882  T
Q  102 taactctcaaaact-tgttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaa 193  Q
    |||| | ||||| |   |||||||| |||| || ||||||||| |||||  |||||||||||||||||||||  |||||||| ||||||||||    
T  2279881 taacacccaaaaatccattcttaaactattacaggttcaatctcaatctaaaatctttcctaatcattattatgcatgttcaggcactcaaaa 2279789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 135 - 232
Target Start/End: Complemental strand, 28505030 - 28504933
Alignment:
Q  135 gttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||| | ||| || ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||    
T  28505030 gttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaattacaaaatc 28504933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 11995768 - 11995690
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||    
T  11995768 tctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaaatacgaaatc 11995690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 128 - 232
Target Start/End: Complemental strand, 16385994 - 16385890
Alignment:
Q  128 attccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacg 227  Q
    |||||| ||||||||| |  || || ||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||     
T  16385994 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaattaca 16385895  T
Q  228 aaatc 232  Q
    |||||    
T  16385894 aaatc 16385890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 129 - 232
Target Start/End: Original strand, 38227866 - 38227969
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||| ||||||||| | ||| || ||||||||||||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||||||| ||||    
T  38227866 ttccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacga 38227965  T
Q  229 aatc 232  Q
    ||||    
T  38227966 aatc 38227969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 60 - 232
Target Start/End: Complemental strand, 15143842 - 15143668
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatcttt 158  Q
    |||||||||||| |||||| ||||||||||||||| |||||   | || ||||| ||  |||| ||||  ||||| ||||||||| | |||  |||||||    
T  15143842 tcgcgaggcgagagcctctgctcgccatggcgagtacaggtcagaatcacaaaagttcattctaaaatctttccaggttcaatctcattctaaaatcttt 15143743  T
Q  159 cctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactc-aaaagtcaaaattacgaaatc 232  Q
    |||||||||||||||||||||||| |||||||||  | |||||||| |||||| |||||||||||| ||||||||    
T  15143742 cctaatcattattagacatgttcaggcactcaaaggcatctaaggtacaactcaaaaagtcaaaatcacgaaatc 15143668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 40443788 - 40443866
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||| |||||||||    
T  40443788 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaatacgaaatc 40443866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 60 - 246
Target Start/End: Original strand, 44116821 - 44117007
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaacttgttcttaaattattccaagttcaatcttaatctccaatctttc 159  Q
    |||||||||||| |||||| |||||||||||||||||||||   | || ||||  ||  |  |||||  ||||  ||||||||| | ||| || ||||||    
T  44116821 tcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaatctttccgggttcaatctcattctacattctttc 44116920  T
Q  160 ctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    ||||||||||||||||||||||| | |||||||  | | ||||| ||||||||| |||||||||||||||||  |||||||||||||    
T  44116921 ctaatcattattagacatgttcagggactcaaaggcatataaggatcaactcaagagtcaaaattacgaaatttggatagctctctg 44117007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 129 - 232
Target Start/End: Complemental strand, 15754622 - 15754519
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||| ||||||||| | ||| |  ||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||| | |||    
T  15754622 ttccaggttcaatctcattctactttctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaattcga 15754523  T
Q  229 aatc 232  Q
    ||||    
T  15754522 aatc 15754519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 12699243 - 12699321
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||||||| ||||||||    
T  12699243 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacgaaatc 12699321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 27847554 - 27847476
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||||||||| |||||||||||||| |||||||||| | |||||||||||||||||||||||||| |||||||||    
T  27847554 tctttcctaatcataattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaatacgaaatc 27847476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 232
Target Start/End: Complemental strand, 9751412 - 9751182
Alignment:
Q  2 caacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtg 101  Q
    ||||| |||||||||||||||||||||  ||||| |||||||||||||||        |||||||||||| |||||| ||| ||||||||||||||| |     
T  9751412 caactcgtgcgacaaagatcgcatttaaactaaacaaggcattctgtaacacaagcgctcgcgaggcgagagcctctgctcaccatggcgagttcag-tc 9751314  T
Q  102 taactctcaaaacttg--ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
     || |||| ||| ||   |||| || |  ||||| |||||| || |  || || ||||||||||||| ||||||||||||||| |||||||||  | |||    
T  9751313 aaattctccaaagtttcattct-aagtctttccaggttcaacctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaaggcatct 9751215  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||||||||||||||||||| ||||||||    
T  9751214 aaggttcaactcaaaagtcaaaatcacgaaatc 9751182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 129 - 232
Target Start/End: Complemental strand, 3564099 - 3563996
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||| ||||||||| |  || || ||||||||||||||||||||||||||||| |||||||||| | ||||||  ||||||||||||||||||| ||||    
T  3564099 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagaatcaactcaaaagtcaaaataacga 3564000  T
Q  229 aatc 232  Q
    ||||    
T  3563999 aatc 3563996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 129 - 232
Target Start/End: Original strand, 9509575 - 9509678
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||| ||||||||| |  || || ||||||||||||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||||||| | ||    
T  9509575 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcatga 9509674  T
Q  229 aatc 232  Q
    ||||    
T  9509675 aatc 9509678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 2832016 - 2831938
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||| ||||||||||||||| |||||||||  | ||||||||||||||||||||||||||| ||||||||    
T  2832016 tctttcctaatcaatattagacatgttcaggcactcaaaggcatctaaggttcaactcaaaagtcaaaatcacgaaatc 2831938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 232
Target Start/End: Complemental strand, 39267508 - 39267278
Alignment:
Q  2 caacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaa--ctagtcaattcgcgaggcgagggcctctactcgccatggcgagttcagg 99  Q
    ||||| |||||||||||||| |||||| |||||| ||||||||||||||  |||||    || ||||||||| |||||| |||||||||||||||||||     
T  39267508 caactcgtgcgacaaagatcacatttaacctaaacaaggcattctgtaatactagtgc--tcccgaggcgagagcctctgctcgccatggcgagttcag- 39267412  T
Q  100 tgtaactctcaaaacttg--ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacct 197  Q
    |   | |||| ||| ||   |||| || |  ||||| ||||||||| |  || || ||||||||||||| ||||||||||||||| |||||||||  | |    
T  39267411 tcagattctccaaagtttcattct-aagtctttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaaggcat 39267313  T
Q  198 ctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
     ||||||||||||||||||||||||| || |||||    
T  39267312 ataaggttcaactcaaaagtcaaaatcacaaaatc 39267278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 129 - 232
Target Start/End: Original strand, 18302564 - 18302667
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||| ||||||||| |  || || ||||||||||| | ||||||||||||||| ||||||||   | ||||||||||||||||||||||||||||||||    
T  18302564 ttccaggttcaatctcatcctacattctttcctaataaatattagacatgttcaggcactcaagggcatctaaggttcaactcaaaagtcaaaattacga 18302663  T
Q  229 aatc 232  Q
    ||||    
T  18302664 aatc 18302667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 63 - 212
Target Start/End: Complemental strand, 21064964 - 21064814
Alignment:
Q  63 cgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcct 161  Q
    ||||||||| ||||||||||||||||||||||| ||||  ||| ||||||| |   |||| | | ||||||||||||||||| | |||  ||| ||||||    
T  21064964 cgaggcgagagcctctactcgccatggcgagttaaggtaaaacactcaaaaatccattctgacactattccaagttcaatctcattctaaaatatttcct 21064865  T
Q  162 aatcattattagacatgttcacgcactcaaaaacctctaaggttcaactca 212  Q
    ||||||||||  ||||||||| || |||| |||| ||||||||| ||||||    
T  21064864 aatcattattgtacatgttcaggccctcataaacatctaaggttaaactca 21064814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 34201194 - 34201272
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||| | ||||||||||||||||||||  ||||||||| | |||||||||||||||||||||||||| |||||||||    
T  34201194 tctttcttgatcattattagacatgttcagacactcaaaagcatctaaggttcaactcaaaagtcaaaaatacgaaatc 34201272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 232
Target Start/End: Original strand, 26212370 - 26212474
Alignment:
Q  128 attccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacg 227  Q
    |||||| ||||||||| |  || || |||| |||||| | ||||||||||||||| |||||||||  | ||||||||||||||||||||||||||||||     
T  26212370 attccaggttcaatctcatcctacattcttacctaataaatattagacatgttcaggcactcaaaggcatctaaggttcaactcaaaagtcaaaattaca 26212469  T
Q  228 aaatc 232  Q
    |||||    
T  26212470 aaatc 26212474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 179 - 232
Target Start/End: Complemental strand, 18154522 - 18154469
Alignment:
Q  179 ttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18154522 ttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaattacgaaatc 18154469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 231
Target Start/End: Original strand, 2760542 - 2760613
Alignment:
Q  160 ctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaat 231  Q
    |||||| |||||| |||| || | |||||||||| | |||||||||||||||||||||||||||||||||||    
T  2760542 ctaatctttattaaacatcttaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaattacgaaat 2760613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 231
Target Start/End: Original strand, 3272202 - 3272273
Alignment:
Q  160 ctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaat 231  Q
    |||||| |||||| |||| || | |||||||||| | |||||||||||||||||||||||||||||||||||    
T  3272202 ctaatctttattaaacatcttaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaattacgaaat 3272273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 179 - 232
Target Start/End: Complemental strand, 19649170 - 19649117
Alignment:
Q  179 ttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||| |||||||||||| |||||||||||||||||||||||||| |||||||||    
T  19649170 ttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaactacgaaatc 19649117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 232
Target Start/End: Original strand, 24054884 - 24054955
Alignment:
Q  161 taatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||| ||| || |||| |||| |||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  24054884 taatctttaatatacatcttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaactacaaaatc 24054955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 10508786 - 10508725
Alignment:
Q  161 taatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    ||||| ||| ||| ||| |||| |||||||||||| ||||||||||||||||||||||||||    
T  10508786 taatctttaataggcatcttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaa 10508725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 11880668 - 11880729
Alignment:
Q  161 taatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    ||||||||| || |||| || | |||||||||||| ||||||||||||||||||||||||||    
T  11880668 taatcattaataaacatctttaggcactcaaaaacatctaaggttcaactcaaaagtcaaaa 11880729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 197 - 232
Target Start/End: Original strand, 14194731 - 14194766
Alignment:
Q  197 tctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||||||||||||||||||    
T  14194731 tctaaggttcaactcaaaagtcaaaattacgaaatc 14194766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 98
Target Start/End: Complemental strand, 9177469 - 9177431
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcag 98  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  9177469 tcgcgaggcgagggcctctactcgctatggcgagttcag 9177431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 222
Target Start/End: Original strand, 9703705 - 9703743
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  9703705 gcactcaaaaacatctaaggttcaactcaaaagtcaaaa 9703743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 12321423 - 12321385
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  12321423 gcactcaaaaacgtctaaggttcaactcaaaagtcaaaa 12321385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 2529915 - 2529866
Alignment:
Q  2 caacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaac 51  Q
    ||||| ||||||||||||||||||||| |||||  |||||||||||||||    
T  2529915 caactcgtgcgacaaagatcgcatttaacctaattaaggcattctgtaac 2529866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 15754751 - 15754702
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaa 50  Q
    |||||| ||||||||||||||||||||| |||||| |||||||| |||||    
T  15754751 tcaactcgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaa 15754702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 2529703 - 2529631
Alignment:
Q  138 caatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaact 210  Q
    |||||| |||||  || ||| |||||||||||||| |||| |||| |||||||||| | ||||||||||||||    
T  2529703 caatctcaatctaaaaacttgcctaatcattattatacatattcaggcactcaaaatcatctaaggttcaact 2529631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 26212311 - 26212351
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  26212311 tcgcgaggcgagagcctctactcgccgtggcgagttcaggt 26212351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 11995882 - 11995796
Alignment:
Q  11 cgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcag 98  Q
    |||||||||||||||||| |||||| |||||||||||||||        |||||||||||| |||||| || ||||||||||||||||    
T  11995882 cgacaaagatcgcatttaacctaaa-aaggcattctgtaacacaaatgctcgcgaggcgagagcctctgcttgccatggcgagttcag 11995796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 15008353 - 15008263
Alignment:
Q  8 gtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcagg 99  Q
    |||||||||||||||||   | |||||| |||| |||||  |||| | ||| |||||||||||| |||||||||||| |||| |||||||||    
T  15008353 gtgcgacaaagatcgcaaa-accctaaacaaggtattctacaactgggcaactcgcgaggcgagagcctctactcgctatggtgagttcagg 15008263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 225
Target Start/End: Original strand, 42205530 - 42205569
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaatta 225  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  42205530 actcaaaagcatctaaggttcaactcaaaagtcaaaatta 42205569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 9177318 - 9177252
Alignment:
Q  135 gttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaa 201  Q
    ||||||||| |||||  || ||| |||||||||| ||| ||||||||| |||||||||||| |||||    
T  9177318 gttcaatctcaatctaaaaacttacctaatcattcttatacatgttcaggcactcaaaaacatctaa 9177252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Original strand, 12187452 - 12187490
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||| | ||||||||||||||||||||||||||    
T  12187452 gcactcaaaagcatctaaggttcaactcaaaagtcaaaa 12187490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 226
Target Start/End: Original strand, 14430317 - 14430359
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaattac 226  Q
    |||||||||| | ||||||||| ||||||||||||||||||||    
T  14430317 gcactcaaaagcatctaaggtttaactcaaaagtcaaaattac 14430359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 17137744 - 17137706
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||| | ||||||||||||||||||||||||||    
T  17137744 gcactcaaaagcatctaaggttcaactcaaaagtcaaaa 17137706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 98
Target Start/End: Original strand, 18302495 - 18302533
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcag 98  Q
    |||||||||||| |||||| |||||||||||||||||||    
T  18302495 tcgcgaggcgagagcctctgctcgccatggcgagttcag 18302533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 14045216 - 14045281
Alignment:
Q  135 gttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctcta 200  Q
    ||||||||| |||||  || ||| |||||||||||||| |||| |||| |||||||||||| ||||    
T  14045216 gttcaatctcaatctaaaaacttgcctaatcattattatacatattcaggcactcaaaaacatcta 14045281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 14355246 - 14355311
Alignment:
Q  135 gttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctcta 200  Q
    ||||||||| |||||  || ||| |||||||||||||| |||| |||| |||||||||||| ||||    
T  14355246 gttcaatctcaatctaaaaacttgcctaatcattattatacatattcaggcactcaaaaacatcta 14355311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 28505153 - 28505069
Alignment:
Q  11 cgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttc 96  Q
    |||||||||||||||| | |||||| |||||||||||||||        |||||||||||| |||||| |||||||||||||||||    
T  28505153 cgacaaagatcgcattcaacctaaa-aaggcattctgtaacacaaacgctcgcgaggcgagagcctctgctcgccatggcgagttc 28505069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 222
Target Start/End: Original strand, 8917842 - 8917878
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||| | ||||||||||||||||||||||||||    
T  8917842 actcaaaagcatctaaggttcaactcaaaagtcaaaa 8917878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 9509504 - 9509544
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  9509504 tcgcgaggcgagagcctctcctcgccgtggcgagttcaggt 9509544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 222
Target Start/End: Original strand, 13462177 - 13462213
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||| | ||||||||||||||||||||||||||    
T  13462177 actcaaaagcatctaaggttcaactcaaaagtcaaaa 13462213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 96
Target Start/End: Original strand, 15113260 - 15113296
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttc 96  Q
    |||||||||||| |||||||||||| |||||||||||    
T  15113260 tcgcgaggcgagagcctctactcgctatggcgagttc 15113296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 15211867 - 15211903
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaa 220  Q
    |||||||||| | ||||||||||||||||||||||||    
T  15211867 gcactcaaaagcatctaaggttcaactcaaaagtcaa 15211903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 222
Target Start/End: Original strand, 15581108 - 15581144
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||| | ||||||||||||||||||||||||||    
T  15581108 actcaaaagcatctaaggttcaactcaaaagtcaaaa 15581144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 222
Target Start/End: Complemental strand, 15604962 - 15604926
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||| | ||||||||||||||||||||||||||    
T  15604962 actcaaaagcatctaaggttcaactcaaaagtcaaaa 15604926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 222
Target Start/End: Original strand, 18557387 - 18557423
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||  ||||||||||||||||||||||||||||    
T  18557387 actcaaaggcctctaaggttcaactcaaaagtcaaaa 18557423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 38227796 - 38227836
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  38227796 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 38227836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 40443704 - 40443744
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  40443704 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 40443744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 157; Significance: 1e-83; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 6793 - 7039
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  6793 tcaacttgtgcgacaaagatcgcatttatcctaaacaaggcattttgtaactagtcaattcgcgaggggagggcctccactcgccatggcgagttcaggt 6892  T
Q  101 gtaactctcaaaactt--gttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctc 198  Q
     |||||| || || ||  ||||||||| ||||||| ||||||||| |||||||||||||||||||| |||||||||||||| || |||||| ||||| ||    
T  6893 ataactcccacaagtttcgttcttaaactattccaggttcaatctcaatctccaatctttcctaattattattagacatgtccaggcactc-aaaacatc 6991  T
Q  199 taaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
     |||| |||||||||||||||||||||||||||| |||||||||||||    
T  6992 aaaggatcaactcaaaagtcaaaattacgaaatctggatagctctctg 7039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 98
Target Start/End: Original strand, 8786 - 8824
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcag 98  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  8786 tcgcgaggcgagggcctctactcgctatggcgagttcag 8824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 13198 - 13442
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| ||| |||||||||| |||||| |||||  |||||||||||||||| || |  |||||||||||||||||||||||||||||||||||||||||    
T  13198 tcaactcgtgtgacaaagatcacatttaacctaac-aaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccatggcgagttcaggt 13296  T
Q  101 gtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
    | ||||| ||||| ||  |||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||    
T  13297 gcaactcacaaaaattcattcttaaactattccaggttcaatcttaatctccaatctttcctaatcataattagacatgttcaggcactcaaaaacatct 13396  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatccggatagctctct 245  Q
    ||||||||||||||| |||||||||||||||||  || ||||||||    
T  13397 aaggttcaactcaaaggtcaaaattacgaaatcatgacagctctct 13442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 135; Significance: 2e-70; HSPs: 2)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 7068 - 7314
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    ||||||||||||||||  |||||||||| |||||| ||||||||||||||||||| |  |||| ||||||| ||||||||||||||||||||||||||||    
T  7068 tcaacttgtgcgacaagaatcgcatttaacctaaacaaggcattctgtaactagttagctcgcaaggcgagagcctctactcgccatggcgagttcaggt 7167  T
Q  101 gtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
      |  || ||||| ||  |||| ||||  ||||| ||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  7168 tcagttcacaaaaattcattctaaaatctttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatct 7267  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||    
T  7268 aaggatcaactcaaaagtcaaaattacgaaatctggatagctctctg 7314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 40 - 232
Target Start/End: Original strand, 8312 - 8505
Alignment:
Q  40 gcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaact-tgttcttaaattattccaagttc 138  Q
    ||||| ||||||| | ||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |   |||||||| ||||||| ||||    
T  8312 gcattatgtaactggacaactcgcgaggcgagggcctccactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattccaggttc 8411  T
Q  139 aatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||| |||||  ||||||| ||||||||||||| |||| ||||  ||| ||||||| | |||||||||||| ||  ||||||| |||||||||    
T  8412 aatctcaatctagaatcttttctaatcattattacacatattcagacacccaaaaacatttaaggttcaacttaagggtcaaaactacgaaatc 8505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 135; Significance: 2e-70; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 31 - 232
Target Start/End: Original strand, 25176129 - 25176331
Alignment:
Q  31 ctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaact-tgttcttaaattat 129  Q
    ||||| ||||||||||||||||   || |||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||| |||    
T  25176129 ctaaacaaggcattctgtaactgcgcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtctaactctcaaaaatctgttcttaaactat 25176228  T
Q  130 tccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaa 229  Q
    |||| ||||||||| ||||||||| ||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||    
T  25176229 tccaggttcaatctcaatctccaacctttcctaatcataattagacatgttcaggcactcaaaaacatctaaggttcaactcaaaggtcaaaattacgaa 25176328  T
Q  230 atc 232  Q
    |||    
T  25176329 atc 25176331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 22134079 - 22133835
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| ||||||||||||||||||||| |||||| |||||| ||||||||      |||||||||||||| |||||| ||||||||||||||||||| |    
T  22134079 tcaactcgtgcgacaaagatcgcatttaacctaaacaaggcagtctgtaacacaagtattcgcgaggcgagagcctctgctcgccatggcgagttcagtt 22133980  T
Q  101 gtaactctcaaaacttgttcttaaattattccaag-ttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
      |  || ||||| |  |||| ||| | |||| || |||||||| | |||||||||||||||||||||||||||||||||||| |||||||||| | |||    
T  22133979 c-agttcacaaaattcattct-aaagtcttcctaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaagcatct 22133882  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    |||| |||||||||||||||||| ||||||||| | |||||||||||    
T  22133881 aaggatcaactcaaaagtcaaaagtacgaaatctgaatagctctctg 22133835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 231
Target Start/End: Complemental strand, 23708479 - 23708252
Alignment:
Q  2 caacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtg 101  Q
    ||||| |||||||||||||||||   |||||||| ||| |||||||||||| |  || |||| ||||||| |||||||||||| ||||||||||||||||    
T  23708479 caactcgtgcgacaaagatcgcaaa-atcctaaacaag-cattctgtaactgggtaactcgcaaggcgagagcctctactcgctatggcgagttcaggtg 23708382  T
Q  102 taactctcaaaact-tgttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctcta 200  Q
    |||||| ||||| |   |||||||| |||||| | |||||||| ||||| | | ||||||||||||||| || | |||||||  ||||||||||| ||||    
T  23708381 taactcccaaaaatccattcttaaactattccga-ttcaatctcaatctacgaactttcctaatcattaatacatatgttcagacactcaaaaacatcta 23708283  T
Q  201 aggttcaactcaaaagtcaaaattacgaaat 231  Q
    | | |||||||||  ||||||| ||||||||    
T  23708282 aagatcaactcaagggtcaaaactacgaaat 23708252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 28406236 - 28406429
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| ||||||||| ||||||||||| |||||| |||||||| ||||||      | | |||||||||| ||||||||||||||||||||||||||||    
T  28406236 tcaactcgtgcgacaaggatcgcatttaacctaaacaaggcattatgtaacacaagtacttgcgaggcgagagcctctactcgccatggcgagttcaggt 28406335  T
Q  101 gtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaa 193  Q
      |  || ||||| ||  |||| ||||  || || ||||||||| | |||||||||||||||||| ||||||||||||||||| ||||||||||    
T  28406336 tcagttcacaaaattttattctaaaatctttacaggttcaatctcattctccaatctttcctaattattattagacatgttcaggcactcaaaa 28406429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 128 - 232
Target Start/End: Original strand, 23286235 - 23286339
Alignment:
Q  128 attccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacg 227  Q
    |||||| ||||||||| |  || || |||||||||||||||||||||||||||||  ||||||||| | |||||||||||||||||||||||||||||||    
T  23286235 attccatgttcaatctcatcctacattctttcctaatcattattagacatgttcagacactcaaaagcatctaaggttcaactcaaaagtcaaaattacg 23286334  T
Q  228 aaatc 232  Q
    |||||    
T  23286335 aaatc 23286339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 63 - 232
Target Start/End: Original strand, 23660341 - 23660511
Alignment:
Q  63 cgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaacttg--ttcttaaattattccaagttcaatcttaatctccaatctttcc 160  Q
    ||||||||| |||||| |||||| ||||||||||||||   | || ||||| ||   |||| ||||  ||||| ||||||||| | ||| || |||||||    
T  23660341 cgaggcgagagcctctgctcgccgtggcgagttcaggtcagattc-caaaagtttcattctaaaatctttccaggttcaatctcattctacattctttcc 23660439  T
Q  161 taatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||||||| ||||||||    
T  23660440 taatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacgaaatc 23660511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 128 - 232
Target Start/End: Complemental strand, 23654146 - 23654042
Alignment:
Q  128 attccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacg 227  Q
    |||||| ||||||||| |  || || ||||||||||||||||||||||||||||| ||| |||||| | ||||||||||||||||||||||||||||| |    
T  23654146 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcagtcaaaagcatctaaggttcaactcaaaagtcaaaattatg 23654047  T
Q  228 aaatc 232  Q
    |||||    
T  23654046 aaatc 23654042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 60 - 232
Target Start/End: Complemental strand, 298620 - 298447
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaacttg--ttcttaaattattccaagttcaatcttaatctccaatctt 157  Q
    |||||||||||| ||||||||||||| ||||||||||||||   | || || || ||   |||| ||||  ||||| ||||||||| |  ||  | ||||    
T  298620 tcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccacaagtttcattct-aaatctttccaggttcaatctcatcctatattctt 298522  T
Q  158 tcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||||||| ||||||||    
T  298521 tcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacgaaatc 298447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 28292012 - 28291934
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||| ||||||||||||| |||||||||| | |||||||||||||||||||||||||| |||||||||    
T  28292012 tctttcctaatcattcttagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaatacgaaatc 28291934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 60 - 246
Target Start/End: Complemental strand, 32451735 - 32451547
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaactt--gttcttaaattattccaagttcaatcttaatctccaatctt 157  Q
    |||||||||||| |||||| |||||| ||||||||||||||   | || || || ||   ||||  |||  ||||| ||||||||| |  || || |||     
T  32451735 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccatgttcaatctcatcctacattctc 32451636  T
Q  158 tcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    ||||||||||||||| ||||||||| |||||||||| | ||||||| ||||||||||||||||||| |||||||  |||||||||||||    
T  32451635 tcctaatcattattaaacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacgaaatttggatagctctctg 32451547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 37835 - 37760
Alignment:
Q  156 tttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaat 231  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||||||| ||||||||||||||| ||||||||    
T  37835 tttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttccactcaaaagtcaaaaatacgaaat 37760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 129 - 232
Target Start/End: Original strand, 27753961 - 27754064
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||| ||||||||| |  || || ||||||||||||||||||||||||||| | |||||||||| | ||||||| ||||||||||||||||||| ||||    
T  27753961 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttgaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacga 27754060  T
Q  229 aatc 232  Q
    ||||    
T  27754061 aatc 27754064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 129 - 231
Target Start/End: Complemental strand, 22730968 - 22730866
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||| ||||||||| |  || || ||||||||||||||||||||||||||||| |||||||||| | ||||||| ||||||||||||| ||||| ||||    
T  22730968 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagttaaaatcacga 22730869  T
Q  229 aat 231  Q
    |||    
T  22730868 aat 22730866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 22737890 - 22737812
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||| ||||||| |||||||||| | ||||||| ||||||||||||||||||| ||||||||    
T  22737890 tctttcctaatcattattagatatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacgaaatc 22737812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 60 - 232
Target Start/End: Original strand, 22337431 - 22337604
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgt-aactctcaaaacttgttcttaaattattccaagttcaatcttaatctccaatcttt 158  Q
    |||||||||||| ||||||||||||| |||||| |||||||   |||||  |||  ||  |  |||||  ||||| ||||||||| |  || || |||||    
T  22337431 tcgcgaggcgagagcctctactcgccgtggcgaattcaggtcagaactcaaaaagtttcattctaaatctttccaggttcaatctcatcctacattcttt 22337530  T
Q  159 cctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||||||  ||||||||| | ||||||| ||||||||||||||| ||| ||||||||    
T  22337531 cctaatcattattagacatgttcatacactcaaaagcatctaaggatcaactcaaaagtcagaatcacgaaatc 22337604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 232
Target Start/End: Original strand, 20309479 - 20309583
Alignment:
Q  128 attccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacg 227  Q
    |||||| ||||||||| |  || || |||||||||||||||||||||||| | || |||||||||| | | |||||||||||||||||||||||| ||||    
T  20309479 attccaggttcaatctcatcctacattctttcctaatcattattagacatatccaggcactcaaaagcatataaggttcaactcaaaagtcaaaaatacg 20309578  T
Q  228 aaatc 232  Q
    |||||    
T  20309579 aaatc 20309583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 135 - 213
Target Start/End: Complemental strand, 23071692 - 23071614
Alignment:
Q  135 gttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaa 213  Q
    ||||||||| | ||| || ||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||    
T  23071692 gttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaa 23071614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 60 - 232
Target Start/End: Original strand, 23076757 - 23076929
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaacttgttcttaaattattccaagttcaatcttaatctccaatctttc 159  Q
    |||||||||||| ||||||||||||| ||||||||||||||   | |  ||||  ||  |  |||||  ||||| || |||||| |  || || ||||||    
T  23076757 tcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaattccaaagtttcattctaaatctttccaggtccaatctcatcctacattctttc 23076856  T
Q  160 ctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||| ||||||||||||||||| |||||||||| | ||||||| |||||| || ||||||||| ||||||||    
T  23076857 ctaattattattagacatgttcaggcactcaaaagcatctaaggatcaacttaatagtcaaaatcacgaaatc 23076929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 23207537 - 23207634
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcagg 99  Q
    |||||| ||||||||||| || |||||| |||||  ||||  |||||||||| | ||| |||| ||||||| |||||||||||| ||||||||||||||    
T  23207537 tcaactcgtgcgacaaaggtcacatttaacctaac-aaggtgttctgtaactgggcaactcgcaaggcgagagcctctactcgctatggcgagttcagg 23207634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 20520026 - 20519957
Alignment:
Q  30 cctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcagg 99  Q
    |||||| |||| ||||||||||||| ||| |||||||||||| |||||||| ||| ||||||| ||||||    
T  20520026 cctaaacaaggtattctgtaactaggcaactcgcgaggcgagagcctctacacgctatggcgacttcagg 20519957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 232
Target Start/End: Complemental strand, 23100916 - 23100863
Alignment:
Q  179 ttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||| ||||| |||||| ||| ||||||||||||||||||||||||||||||||    
T  23100916 ttcaggcacttaaaaacatctgaggttcaactcaaaagtcaaaattacgaaatc 23100863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 22798807 - 22798769
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  22798807 gcactcaaaaacatctaaggttcaactcaaaagtcaaaa 22798769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 179 - 229
Target Start/End: Original strand, 23038468 - 23038518
Alignment:
Q  179 ttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaa 229  Q
    |||| |||||||| ||| ||||||||||| |||||||||||||||||||||    
T  23038468 ttcaggcactcaacaacatctaaggttcatctcaaaagtcaaaattacgaa 23038518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 226
Target Start/End: Complemental strand, 25963398 - 25963356
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaattac 226  Q
    |||||||||| | ||||||||||||||||||||||||||||||    
T  25963398 gcactcaaaagcatctaaggttcaactcaaaagtcaaaattac 25963356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 45677836 - 45677798
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  45677836 gcactcaaaaacatctaaggttcaactcaaaagtcaaaa 45677798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 22740664 - 22740607
Alignment:
Q  161 taatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtc 218  Q
    ||||| ||| || |||| |||| |||||||||||| ||||||||||||||||||||||    
T  22740664 taatctttaatatacatcttcaggcactcaaaaacatctaaggttcaactcaaaagtc 22740607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 22758419 - 22758362
Alignment:
Q  161 taatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtc 218  Q
    ||||| ||| || |||| |||| |||||||||||| ||||||||||||||||||||||    
T  22758419 taatctttaatatacatcttcaggcactcaaaaacatctaaggttcaactcaaaagtc 22758362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 24658055 - 24658116
Alignment:
Q  161 taatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    ||||||||| || |||| || | |||||||||| | ||||||||||||||||||||||||||    
T  24658055 taatcattaataaacatctttaggcactcaaaagcatctaaggttcaactcaaaagtcaaaa 24658116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 40621888 - 40621851
Alignment:
Q  185 cactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  40621888 cactcaaaaacatctaaggttcaactcaaaagtcaaaa 40621851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 231
Target Start/End: Complemental strand, 22811615 - 22811568
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaat 231  Q
    |||||||||| |  ||||||||||||||||||||||||||||| ||||    
T  22811615 gcactcaaaagcacctaaggttcaactcaaaagtcaaaattacaaaat 22811568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 231
Target Start/End: Complemental strand, 24716222 - 24716175
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaat 231  Q
    |||||||||||| ||||||||||| |||||||||| | ||||||||||    
T  24716222 gcactcaaaaacatctaaggttcatctcaaaagtccagattacgaaat 24716175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 95
Target Start/End: Original strand, 31756233 - 31756268
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagtt 95  Q
    |||||||||||| |||||||||||||||||||||||    
T  31756233 tcgcgaggcgagagcctctactcgccatggcgagtt 31756268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 226
Target Start/End: Complemental strand, 21917997 - 21917955
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaattac 226  Q
    |||||||||| | ||||||||| ||||||||||||||||||||    
T  21917997 gcactcaaaagcatctaaggttaaactcaaaagtcaaaattac 21917955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 201
Target Start/End: Original strand, 23005193 - 23005263
Alignment:
Q  131 ccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaa 201  Q
    ||||||||||||| ||||   || ||| |||||||||| ||| ||||||||| |||||||||||| |||||    
T  23005193 ccaagttcaatctcaatcaaaaaacttgcctaatcattcttatacatgttcaggcactcaaaaacatctaa 23005263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 226
Target Start/End: Original strand, 37525102 - 37525144
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaattac 226  Q
    |||||||||| | ||||||||| ||||||||||||||||||||    
T  37525102 gcactcaaaagcatctaaggtttaactcaaaagtcaaaattac 37525144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 22412953 - 22412900
Alignment:
Q  46 tgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcagg 99  Q
    ||||||| | ||| || ||||||||| |||||||||||| ||||||||||||||    
T  22412953 tgtaactgggcaactcacgaggcgagagcctctactcgctatggcgagttcagg 22412900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 97
Target Start/End: Original strand, 23791592 - 23791629
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttca 97  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  23791592 tcgcgaggcgagagcctctactcgcgatggcgagttca 23791629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 37922 - 37882
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  37922 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 37882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 23071767 - 23071731
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttc 96  Q
    |||||||||||| |||||| |||||||||||||||||    
T  23071767 tcgcgaggcgagagcctctgctcgccatggcgagttc 23071731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 23286176 - 23286216
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  23286176 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 23286216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 24175227 - 24175271
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaa 230  Q
    |||||||| | |||||||||||||||||||||| ||| |||||||    
T  24175227 actcaaaagcatctaaggttcaactcaaaagtccaaaatacgaaa 24175271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 24870307 - 24870351
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaa 230  Q
    |||||||| | |||||||||||||||||||||| ||| |||||||    
T  24870307 actcaaaagcatctaaggttcaactcaaaagtccaaaatacgaaa 24870351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 222
Target Start/End: Original strand, 27263667 - 27263703
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||| | ||||||||||||||||||||||||||    
T  27263667 actcaaaagcatctaaggttcaactcaaaagtcaaaa 27263703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 131; Significance: 5e-68; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 130164 - 130410
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| |||||||||||||||||||||||||||| |||||||| |||||||||| |  |||||||||||| |||||| |||||||||||||||| ||||    
T  130164 tcaactcgtgcgacaaagatcgcatttatcctaaacaaggcattttgtaactagttagctcgcgaggcgagagcctctgctcgccatggcgagtttaggt 130263  T
Q  101 gtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
    |||| || ||||| |   |||||||| ||||||| ||||||||| |||||  ||||||| |||||||| | |||||||||||| |||||||||||| ||     
T  130264 gtaattcccaaaaatccattcttaaactattccaggttcaatctcaatctagaatcttttctaatcataactagacatgttcaggcactcaaaaacatca 130363  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||    
T  130364 aaggatcaactcaaaagtcaaaattacgaaatctggatagctctctg 130410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 60536 - 60479
Alignment:
Q  42 attctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcagg 99  Q
    ||||||||||| |  || |||||||||||| |||||||||||| ||||||||||||||    
T  60536 attctgtaactgggaaactcgcgaggcgagagcctctactcgctatggcgagttcagg 60479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 129; Significance: 7e-67; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 21329359 - 21329127
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| ||||||||||||||||||||| |||||| ||||||||||||||||||  ||||||||||||||| |||||||||||| |||||||||||| ||    
T  21329359 tcaactcgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaactaggtaattcgcgaggcgagagcctctactcgctatggcgagttcaagt 21329260  T
Q  101 gtaactctcaaaactt-gttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
    | ||||| ||||| ||  ||| |||||||||||| ||||||||| |||||  ||||||| |||||||| | |||||||||||| |||||||||||| |||    
T  21329259 gcaactcccaaaaattcattcctaaattattccaggttcaatctcaatctagaatcttttctaatcataactagacatgttcaggcactcaaaaacatct 21329160  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||| ||| |||||||||||||||||    
T  21329159 aaggttcaacttaaaggtcaaaattacgaaatc 21329127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 22959397 - 22959151
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    ||||||||||| ||||  |||||||||| |||||| ||||||||||||||||||| |  |||||||||||| ||||||||||||||||||||||||||||    
T  22959397 tcaacttgtgcaacaagaatcgcatttaacctaaacaaggcattctgtaactagttagctcgcgaggcgagagcctctactcgccatggcgagttcaggt 22959298  T
Q  101 gtaactctcaaaacttgttcttaaattat-tccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
      |  || ||||| ||  |  |||| | | |||| ||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  22959297 tcagttcacaaaaattcattctaaagtctctccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatct 22959198  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    |||| |||||||||||||||||||||||||||  |||||||||||||    
T  22959197 aaggatcaactcaaaagtcaaaattacgaaatttggatagctctctg 22959151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 21565801 - 21566047
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| ||||||||||||||||||||  | |||| ||| ||||||||||||||| |  || ||||||||| |||||| |||||||||||||||||||||    
T  21565801 tcaactcgtgcgacaaagatcgcattttacataaacaagtcattctgtaactagttagctcacgaggcgagagcctctgctcgccatggcgagttcaggt 21565900  T
Q  101 gtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
      || || | ||| ||  |||| ||||  ||||| ||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  21565901 acaattcacgaaaattcattctaaaatctttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatct 21566000  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    |||| |||||||||||||||||||||||||||| ||| |||||||||    
T  21566001 aaggatcaactcaaaagtcaaaattacgaaatctggacagctctctg 21566047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 19669156 - 19669403
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    ||||||||||||||||  ||| ||||||||||||| ||||||||||||||||||| |  | | |||||||| |||||||| |||||||||||||||||||    
T  19669156 tcaacttgtgcgacaagaatcacatttatcctaaacaaggcattctgtaactagttagctggtgaggcgagagcctctacacgccatggcgagttcaggt 19669255  T
Q  101 gtaactctcaaaacttg--ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctc 198  Q
      || || |||||  |   |||| || |  ||||| ||||||||| | || |||||||||||||||||||||||||||||||||  ||||||||||| ||    
T  19669256 acaattcacaaaaaattcattctaaagtctttccacgttcaatctcattccccaatctttcctaatcattattagacatgttcagacactcaaaaacatc 19669355  T
Q  199 taaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||    
T  19669356 taaggatcaactcaaaagtcaaaattacgaaatctggatagctctctg 19669403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 8 - 232
Target Start/End: Complemental strand, 5889032 - 5888807
Alignment:
Q  8 gtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactc 107  Q
    ||||||||||||||||||||| |||||| |||||||||||||| | |  |  |||||||||||| ||||||||||||||||||||||||||||| |||||    
T  5889032 gtgcgacaaagatcgcatttaacctaaacaaggcattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaactc 5888933  T
Q  108 tcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttc 206  Q
     ||||  ||  |||||||| ||||||| ||||||||| ||||| ||||||||||||||||| || | ||| ||||| |||||||||||| |||||| |||    
T  5888932 acaaagattcattcttaaactattccatgttcaatctcaatctacaatctttcctaatcatcatcatacaagttcaggcactcaaaaacatctaagcttc 5888833  T
Q  207 aactcaaaagtcaaaattacgaaatc 232  Q
     ||| ||| ||||||| ||| |||||    
T  5888832 gacttaaaggtcaaaactacaaaatc 5888807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 21741407 - 21741175
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| |||||||||||||||| |||| |||||| ||| |||| ||||||| || |  || ||||||||| ||||||||||||||||||||||||||||    
T  21741407 tcaactcgtgcgacaaagatcgcttttaacctaaacaagacattatgtaactggttagctcacgaggcgagagcctctactcgccatggcgagttcaggt 21741308  T
Q  101 gtaactctca-aaacttgttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
    | ||||| || ||| | ||||||||| ||||||| ||||||||| |||||  ||||||||||| |||| || | ||| ||||| |||||||||||  |||    
T  21741307 gcaactcacataaattcgttcttaaactattccaggttcaatctcaatctataatctttcctattcatcatcatacaagttcaggcactcaaaaatatct 21741208  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||| ||| ||| ||||||| ||| |||||    
T  21741207 aaggttcgacttaaaggtcaaaactacaaaatc 21741175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 2 - 193
Target Start/End: Original strand, 22144310 - 22144500
Alignment:
Q  2 caacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtg 101  Q
    ||||| |||||||||||||||||   |||||||| ||| |||||||||||| | ||| |||||||||||| |||||||||||| ||||||||||||||||    
T  22144310 caactcgtgcgacaaagatcgcaaa-atcctaaacaag-cattctgtaactgggcaactcgcgaggcgagagcctctactcgctatggcgagttcaggtg 22144407  T
Q  102 taactctcaaaact-tgttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaa 193  Q
    |||||| ||||| |   |||||||||||||||| ||||||||| |||||  ||||||||||||||||| ||| ||||||||| ||||||||||    
T  22144408 taactcccaaaaatccattcttaaattattccaggttcaatctcaatctagaatctttcctaatcattgttacacatgttcaggcactcaaaa 22144500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 26011897 - 26011666
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| ||| |||||||||| |||||| |||||  ||| |||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||    
T  26011897 tcaactcgtgtgacaaagatcacatttaacctaacaaag-cattctgtaactagacaactcgcgaggcgaaggcctctactcgccatggcgagttcaggt 26011799  T
Q  101 gtaactctcaaaact-tgttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
    ||||||| ||||| |   |||||||| ||||||| ||||||||| ||| |  |||||||| |||||||||||| ||||||| |  |||||| || | |||    
T  26011798 gtaactcccaaaaatccattcttaaactattccaggttcaatctcaatttagaatctttcttaatcattattacacatgtttagacactcataatcatct 26011699  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    || |||||||| ||   |||||| |||||||||    
T  26011698 aaagttcaacttaaggatcaaaactacgaaatc 26011666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 8 - 246
Target Start/End: Complemental strand, 36154683 - 36154446
Alignment:
Q  8 gtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactc 107  Q
    |||||||||||||||||   |||||||| ||| |||||||||| |||   | |||||||||||| ||||||||||||||||||||||||||||   | ||    
T  36154683 gtgcgacaaagatcgcaaa-atcctaaacaag-cattctgtaaataggtcactcgcgaggcgagagcctctactcgccatggcgagttcaggtcagattc 36154586  T
Q  108 tcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttc 206  Q
    |||||  ||  |||| ||||   |||| ||||||||| | ||| || ||||||||||||||||||||||||||||| |||||||||| | ||||||| ||    
T  36154585 tcaaagttttattctaaaatctatccaggttcaatctcactctacattctttcctaatcattattagacatgttcaagcactcaaaagcatctaaggatc 36154486  T
Q  207 aactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    |||| |||||||||||| | |||||  |||||||||||||    
T  36154485 aacttaaaagtcaaaatcatgaaatttggatagctctctg 36154446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 60 - 246
Target Start/End: Complemental strand, 11581050 - 11580863
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatcttt 158  Q
    |||||||||||| |||||| |||||||||||||||||||||   | |||||||  ||  |||| ||||   |||| ||||||||| | ||| || |||||    
T  11581050 tcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattctcaaagttttattctaaaatctatccaggttcaatctcattctacattcttt 11580951  T
Q  159 cctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    |||||||||||||| ||||||||| |||||||||| | ||||||| ||||||||||||||||||| |||||||  |||||||||||||    
T  11580950 cctaatcattattaaacatgttcaggcactcaaaagcttctaaggatcaactcaaaagtcaaaatcacgaaatttggatagctctctg 11580863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 60 - 232
Target Start/End: Original strand, 1096783 - 1096956
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatcttt 158  Q
    |||||||||||| ||||||||||||| ||||||||||||||   | |  ||||| ||  ||||  |||  |||||  |||||||| |  || || |||||    
T  1096783 tcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagatttccaaaagttcattctgcaatctttccagattcaatctcatcctacattcttt 1096882  T
Q  159 cctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||| ||||||||    
T  1096883 cctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaatcacgaaatc 1096956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 97 - 232
Target Start/End: Complemental strand, 21498785 - 21498649
Alignment:
Q  97 aggtgtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaac 195  Q
    ||||||||||||||||| ||  ||||| || ||||||| ||||||||| ||||| |||||| ||||||| ||||||| ||||||||| ||||||||||||    
T  21498785 aggtgtaactctcaaaaatttattcttcaactattccaggttcaatctcaatctacaatctctcctaataattattatacatgttcaggcactcaaaaac 21498686  T
Q  196 ctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
     || ||||||||||| ||| |||||||||||| ||||    
T  21498685 atccaaggttcaacttaaaggtcaaaattacgcaatc 21498649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 223
Target Start/End: Complemental strand, 22120055 - 22119834
Alignment:
Q  2 caacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaa--ctagtcaattcgcgaggcgagggcctctactcgccatggcgagttcagg 99  Q
    ||||| ||||||||||||||||||||| |||||| ||||||||||||||  |||||    |||||||||||| |||||| |||||||||||||||||||     
T  22120055 caactcgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaatactagtgc--tcgcgaggcgagagcctctgctcgccatggcgagttcag- 22119959  T
Q  100 tgtaactctcaaaacttg--ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacct 197  Q
    |   | |||| ||| ||   |||| || |  ||||| ||||||||| |  || || ||||||||||||| ||||||||||||||| |||||||||  | |    
T  22119958 tcagattctccaaagtttcattct-aagtctttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaaggcat 22119860  T
Q  198 ctaaggttcaactcaaaagtcaaaat 223  Q
    ||||||||||||||||||||||||||    
T  22119859 ctaaggttcaactcaaaagtcaaaat 22119834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 60 - 232
Target Start/End: Complemental strand, 21985952 - 21985779
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaactt--gttcttaaattattccaagttcaatcttaatctccaatctt 157  Q
    ||||||||||||||||||| || ||| ||||||||||||||   | |  ||||| ||   ||| |||||  ||||| ||||||||| | ||| || ||||    
T  21985952 tcgcgaggcgagggcctctgcttgccgtggcgagttcaggtcagaattccaaaagtttcattc-taaatctttccaggttcaatctcattctacattctt 21985854  T
Q  158 tcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||||||| ||||||||    
T  21985853 tcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacgaaatc 21985779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 128 - 232
Target Start/End: Complemental strand, 21292717 - 21292613
Alignment:
Q  128 attccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacg 227  Q
    |||||| ||||||||| |  || || ||||||||||| ||||||||||||||||| |||||||||| | |||||||||||||||||||||||||| ||||    
T  21292717 attccaggttcaatctcatcctacattctttcctaattattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaatacg 21292618  T
Q  228 aaatc 232  Q
    |||||    
T  21292617 aaatc 21292613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 64 - 232
Target Start/End: Complemental strand, 23390298 - 23390128
Alignment:
Q  64 gaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaactt--gttcttaaattattccaagttcaatcttaatctccaatctttcct 161  Q
    |||||||  ||||||||||||||||||||||||||||   | || || || ||   ||||  |||  ||||| ||||||||| |  || || ||||||||    
T  23390298 gaggcgatagcctctactcgccatggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattctttcct 23390199  T
Q  162 aatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||||||| ||||||||    
T  23390198 aatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacgaaatc 23390128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 19660547 - 19660469
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||| ||| |||||    
T  19660547 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaatacaaaatc 19660469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 22075419 - 22075497
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||| |||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||| ||||||||    
T  22075419 tcttacctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaatcacgaaatc 22075497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 129 - 232
Target Start/End: Complemental strand, 21871306 - 21871203
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||| ||||||||| |  || || |||||||||||||||| || ||||||||| |||||||||| | ||||||||||||||||||||||||||| ||||    
T  21871306 ttccaggttcaatctcatcctacactctttcctaatcattaataaacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaatcacga 21871207  T
Q  229 aatc 232  Q
    ||||    
T  21871206 aatc 21871203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 129 - 232
Target Start/End: Complemental strand, 21875586 - 21875483
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||| ||||||||| |  || || |||||||||||||||| || ||||||||| |||||||||| | ||||||||||||||||||||||||||| ||||    
T  21875586 ttccaggttcaatctcatcctacactctttcctaatcattaataaacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaatcacga 21875487  T
Q  229 aatc 232  Q
    ||||    
T  21875486 aatc 21875483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 129 - 232
Target Start/End: Original strand, 24529607 - 24529710
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||| ||||||||| |  || || ||||||||||||||||||||||||||||| ||||| |||| | ||||||| ||||||||||||||||||| ||||    
T  24529607 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactgaaaagcatctaaggatcaactcaaaagtcaaaatcacga 24529706  T
Q  229 aatc 232  Q
    ||||    
T  24529707 aatc 24529710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 25421943 - 25422021
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||||||||||| |||||||||||| |||||||||| | ||||||| ||||||||||||||||||| ||||||||    
T  25421943 tctttcctaatcattaatagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacgaaatc 25422021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 129 - 232
Target Start/End: Original strand, 9078338 - 9078441
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||| ||||||||| | ||| || | ||||||||||||||||||||||||||| |||||||||| | | ||| | ||||||||||||||||||| ||||    
T  9078338 ttccaggttcaatctcattctacattttttcctaatcattattagacatgttcaggcactcaaaagcatataaagatcaactcaaaagtcaaaatcacga 9078437  T
Q  229 aatc 232  Q
    ||||    
T  9078438 aatc 9078441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 13095905 - 13095983
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||||||||||| ||  |||||| | ||||||| ||||||||||||||||||| ||||||||    
T  13095905 tctttcctaatcattattagacatgttcaggctttcaaaagcatctaaggatcaactcaaaagtcaaaatcacgaaatc 13095983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 25431805 - 25431883
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||||||||||| || ||||||||| |||||||||| | ||||||| ||||||||||||||||||| ||||||||    
T  25431805 tctttcctaatcattaataaacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacgaaatc 25431883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 154 - 231
Target Start/End: Complemental strand, 22107094 - 22107017
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaat 231  Q
    ||||||||||||| ||||||||||||||| |||||||||  | ||||| |||||||||||||||||||| ||||||||    
T  22107094 tctttcctaatcaatattagacatgttcaggcactcaaacgcatctaaagttcaactcaaaagtcaaaaatacgaaat 22107017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 232
Target Start/End: Complemental strand, 8286589 - 8286485
Alignment:
Q  128 attccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacg 227  Q
    |||||| ||||||||| |  || || |||||| |||||||||||||||||||||  |||||||||  | ||||||||||||||||||||||||||  |||    
T  8286589 attccaggttcaatctcatcctacattctttcttaatcattattagacatgttccggcactcaaatgcatctaaggttcaactcaaaagtcaaaaacacg 8286490  T
Q  228 aaatc 232  Q
    |||||    
T  8286489 aaatc 8286485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 232
Target Start/End: Original strand, 24493954 - 24494057
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||| ||||||||| |  || || ||||||||||||||||||||||||||||| ||  |||||| | | ||||| ||||||||||||||||||| ||||    
T  24493954 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcgttcaaaagcatttaaggatcaactcaaaagtcaaaatcacga 24494053  T
Q  229 aatc 232  Q
    ||||    
T  24494054 aatc 24494057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 232
Target Start/End: Complemental strand, 24767199 - 24766969
Alignment:
Q  2 caacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaa--ctagtcaattcgcgaggcgagggcctctactcgccatggcgagttcagg 99  Q
    ||||| |||||||||||||| |||||| |||||| ||||||||||||||  |||||    |||||||||||| |||||| ||||||||| |||||||||     
T  24767199 caactcgtgcgacaaagatcacatttaacctaaacaaggcattctgtaatactagtgc--tcgcgaggcgagagcctctgctcgccatgacgagttcag- 24767103  T
Q  100 tgtaactctcaaaacttg--ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacct 197  Q
    |   | |||| ||| ||   |||| || |  |||||  |||||||| |  || || |||||| |||||| ||||||||||||||| |||||||||  | |    
T  24767102 tcagattctccaaagtttcattct-aagtctttccagattcaatctcatcctacattctttcgtaatcaatattagacatgttcaggcactcaaaggcat 24767004  T
Q  198 ctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||| |||| | ||||||    
T  24767003 ctaaggttcaactcaaaagtcgaaatcatgaaatc 24766969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 13025721 - 13025799
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||||||||||| ||  ||||||   ||||||| ||||||||||| ||||||| ||||||||    
T  13025721 tctttcctaatcattattagacatgttcaggctttcaaaagtatctaaggatcaactcaaaattcaaaatcacgaaatc 13025799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 21502016 - 21501917
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| |||||||||| |||||||||| || ||  ||||||||||| |||| |  || |||||||||||| |||||||||||| |||||||||||||||    
T  21502016 tcaactcgtgcgacaaatatcgcatttaacccaac-aaggcattctg-aactgggtaactcgcgaggcgagagcctctactcgctatggcgagttcaggt 21501919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 161 - 226
Target Start/End: Original strand, 37724319 - 37724384
Alignment:
Q  161 taatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattac 226  Q
    ||||| ||| ||| ||| |||| |||||||||||| ||||||||||||||||||||||||||||||    
T  37724319 taatctttaataggcatcttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaattac 37724384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 23201784 - 23201845
Alignment:
Q  161 taatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    ||||| ||| ||| ||| |||| |||||||||||| ||||||||||||||||||||||||||    
T  23201784 taatctttaataggcatcttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaa 23201845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 231
Target Start/End: Complemental strand, 17918843 - 17918796
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaat 231  Q
    |||||||||| | |||||||||||||||||||||||||||||| ||||    
T  17918843 gcactcaaaagcatctaaggttcaactcaaaagtcaaaattacaaaat 17918796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 20910490 - 20910444
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||| || ||||||||||||||||||||||||||| ||||||||    
T  20910490 actcaaagacatctaaggttcaactcaaaagtcaaaatcacgaaatc 20910444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 226
Target Start/End: Complemental strand, 21366347 - 21366305
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaattac 226  Q
    |||||||||| | ||||||||||||||||||||||||||||||    
T  21366347 gcactcaaaagcatctaaggttcaactcaaaagtcaaaattac 21366305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 222
Target Start/End: Original strand, 21887262 - 21887300
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  21887262 gcactcaaaaacatctaaggttcaactcaaaagtcaaaa 21887300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 1858666 - 1858621
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaat 231  Q
    |||||||| | |||||||||||||||||||||| ||||||||||||    
T  1858666 actcaaaagcatctaaggttcaactcaaaagtccaaattacgaaat 1858621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 97
Target Start/End: Original strand, 25744037 - 25744074
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttca 97  Q
    |||||||||||| |||||||||||||||||||||||||    
T  25744037 tcgcgaggcgagagcctctactcgccatggcgagttca 25744074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 232
Target Start/End: Original strand, 26704499 - 26704552
Alignment:
Q  179 ttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||| |||||||||||  |||| ||||||||||||||||||||||| |||||||    
T  26704499 ttcaggcactcaaaaatatctagggttcaactcaaaagtcaaaatttcgaaatc 26704552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 232
Target Start/End: Original strand, 26974232 - 26974285
Alignment:
Q  179 ttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||| |||||||||||  |||| ||||||||||||||||||||||| |||||||    
T  26974232 ttcaggcactcaaaaatatctagggttcaactcaaaagtcaaaatttcgaaatc 26974285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Original strand, 14079586 - 14079624
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||||| ||||||||| ||||||||||||||||    
T  14079586 gcactcaaaaacatctaaggttgaactcaaaagtcaaaa 14079624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 193
Target Start/End: Complemental strand, 20026592 - 20026534
Alignment:
Q  135 gttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaa 193  Q
    ||||||||| |||||  || ||| |||||||||||||| ||||||||| ||||||||||    
T  20026592 gttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactcaaaa 20026534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 226
Target Start/End: Original strand, 20805985 - 20806027
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaattac 226  Q
    |||||||||| | | ||||||||||||||||||||||||||||    
T  20805985 gcactcaaaagcatataaggttcaactcaaaagtcaaaattac 20806027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Original strand, 22032754 - 22032792
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||| | ||||||||||||||||||||||||||    
T  22032754 gcactcaaaagcatctaaggttcaactcaaaagtcaaaa 22032792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 217
Target Start/End: Complemental strand, 23501031 - 23500993
Alignment:
Q  179 ttcacgcactcaaaaacctctaaggttcaactcaaaagt 217  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  23501031 ttcaggcactcaaaaacatctaaggttcaactcaaaagt 23500993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 218
Target Start/End: Original strand, 23512545 - 23512579
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtc 218  Q
    |||||||||||| ||||||||||||||||||||||    
T  23512545 gcactcaaaaacatctaaggttcaactcaaaagtc 23512579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 243
Target Start/End: Original strand, 29916582 - 29916628
Alignment:
Q  197 tctaaggttcaactcaaaagtcaaaattacgaaatccggatagctct 243  Q
    ||||||| ||||||||||||||||||| |||||||  ||||||||||    
T  29916582 tctaaggatcaactcaaaagtcaaaatcacgaaatttggatagctct 29916628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Original strand, 31342541 - 31342579
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||| | ||||||||||||||||||||||||||    
T  31342541 gcactcaaaagcatctaaggttcaactcaaaagtcaaaa 31342579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 97
Target Start/End: Original strand, 15796738 - 15796774
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttca 97  Q
    |||||||||||||||||||||||||| |||||||||||    
T  15796738 tcgcgaggcgagggcctctactcgcc-tggcgagttca 15796774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 97
Target Start/End: Original strand, 25421848 - 25421885
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttca 97  Q
    |||||||||||| ||||||||||||| |||||||||||    
T  25421848 tcgcgaggcgagagcctctactcgccgtggcgagttca 25421885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 9078268 - 9078308
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  9078268 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 9078308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 12028255 - 12028211
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaa 230  Q
    |||||||| | |||||||||||||||||||||| ||| |||||||    
T  12028255 actcaaaagcatctaaggttcaactcaaaagtccaaaatacgaaa 12028211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 13095810 - 13095850
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    ||||||||||||||||||| |||||  ||||||||||||||    
T  13095810 tcgcgaggcgagggcctctgctcgctgtggcgagttcaggt 13095850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 19660642 - 19660606
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttc 96  Q
    |||||||||||| |||||| |||||||||||||||||    
T  19660642 tcgcgaggcgagagcctctgctcgccatggcgagttc 19660606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 21292776 - 21292736
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  21292776 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 21292736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 22075334 - 22075374
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  22075334 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 22075374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 22107179 - 22107139
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||| |||||| |||||||||| ||||||||||    
T  22107179 tcgcgaggcgagagcctctgctcgccatggtgagttcaggt 22107139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 24222304 - 24222348
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaa 230  Q
    |||||||| | |||||||||||||||||||||| ||| |||||||    
T  24222304 actcaaaagcatctaaggttcaactcaaaagtccaaaatacgaaa 24222348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 127; Significance: 1e-65; HSPs: 60)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 19652452 - 19652698
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| |||||||||||||||||||||||||||| |||| ||| |||||||||| |   ||||||||||| ||||||||||||||||||||||||||||    
T  19652452 tcaactcgtgcgacaaagatcgcatttatcctaaacaaggtattttgtaactagttagcccgcgaggcgagagcctctactcgccatggcgagttcaggt 19652551  T
Q  101 gtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
      || || ||||| ||  |||| || |  ||||| ||||||||| | ||| |||||||||||||||||||||||||||||||| |||||||||||| | |    
T  19652552 acaattcacaaaaattcattctaaagtctttccaggttcaatctcattcttcaatctttcctaatcattattagacatgttcaggcactcaaaaacattt 19652651  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||    
T  19652652 aaggatcaactcaaaagtcaaaattacgaaatctggatagctctctg 19652698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 23019665 - 23019896
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| || |||||||||||||||||| |||||  ||| |||| ||||| | | ||| ||||||||| |||||||||||||||||||||||||||||||    
T  23019665 tcaactcgttcgacaaagatcgcatttaacctaaccaag-cattttgtaattggacaactcgcgaggcaagggcctctactcgccatggcgagttcaggt 23019763  T
Q  101 gtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
    ||||||| ||||| ||  |||||||| ||||||| ||||||||| |||||  ||||||||||||||||||| | ||||||||| |||||||||| | |||    
T  23019764 gtaactcccaaaaattcattcttaaaatattccaggttcaatctcaatctaaaatctttcctaatcattatcacacatgttcaggcactcaaaagcatct 23019863  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||| ||  ||||||| |||||||||    
T  23019864 aaggttcaacttaagggtcaaaactacgaaatc 23019896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 60 - 246
Target Start/End: Complemental strand, 22080542 - 22080355
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaactt-gttcttaaattattccaagttcaatcttaatctccaatcttt 158  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||| || || || ||||||||| ||||||| |||||||||||||||| |||||||    
T  22080542 tcgcgaggcgagagcctctactcgccatggcgagttcaggtataactcccataagttcgttcttaaactattccaggttcaatcttaatctctaatcttt 22080443  T
Q  159 cctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
     |||||||||||||||||||||||  ||||||||||| |||||||||||||| |||  | ||| ||||||||||  ||||||||||||    
T  22080442 tctaatcattattagacatgttcagtcactcaaaaacatctaaggttcaactaaaagtttaaagttacgaaatctagatagctctctg 22080355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 27333147 - 27332916
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| ||||||||| |||| |||||| |||||  ||| |||||||||| | | || ||||||||||||| ||||||||||||||||||||||||||||    
T  27333147 tcaactcgtgcgacaaggatcacatttaacctaacaaag-cattctgtaattgggcagttcgcgaggcgagagcctctactcgccatggcgagttcaggt 27333049  T
Q  101 gtaactctcaaaactt-gttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
    | ||||| ||||||||  |||| ||||  ||||| |||||| || | |||  |||||||||||||||| |||| |||||||||  ||||||||| | |||    
T  27333048 gcaactcacaaaacttcattctaaaatctttccaggttcaacctcattctaaaatctttcctaatcatcattatacatgttcagccactcaaaagcatct 27332949  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||| ||| |||||||||| ||||||    
T  27332948 aaggttcaacttaaaggtcaaaattatgaaatc 27332916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 27393887 - 27393656
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| ||||||||| |||| |||||| |||||  ||| |||||||||| | | || ||||||||||||| ||||||||||||||||||||||||||||    
T  27393887 tcaactcgtgcgacaaggatcacatttaacctaacaaag-cattctgtaattgggcagttcgcgaggcgagagcctctactcgccatggcgagttcaggt 27393789  T
Q  101 gtaactctcaaaactt-gttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
    | ||||| ||||||||  |||| ||||  ||||| |||||| || | |||  |||||||||||||||| |||| |||||||||  ||||||||| | |||    
T  27393788 gcaactcacaaaacttcattctaaaatctttccaggttcaacctcattctaaaatctttcctaatcatcattatacatgttcagccactcaaaagcatct 27393689  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||| ||| |||||||||| ||||||    
T  27393688 aaggttcaacttaaaggtcaaaattatgaaatc 27393656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 2 - 242
Target Start/End: Original strand, 25644582 - 25644821
Alignment:
Q  2 caacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtg 101  Q
    ||||| |||||||||||||||||   | |||||| ||| ||||||| |||  | ||| ||||||||||||||||||||||||| ||||||||||| ||||    
T  25644582 caactcgtgcgacaaagatcgcaaaaa-cctaaacaag-cattctgaaaccgggcaactcgcgaggcgagggcctctactcgctatggcgagttcgggtg 25644679  T
Q  102 taactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctcta 200  Q
    |||||| ||||| |   |||||||| |||| || ||||||||| |||||  |||||||||||||||   ||| |||||  || |||||||||||| ||||    
T  25644680 taactcccaaaaatccattcttaaactatttcaggttcaatctcaatctaaaatctttcctaatcaacgttatacatgaacaggcactcaaaaacatcta 25644779  T
Q  201 aggttcaactcaaaagtcaaaattacgaaatccggatagctc 242  Q
    |||||||||| ||| |||||||||||||||||  ||||||||    
T  25644780 aggttcaacttaaaggtcaaaattacgaaatcatgatagctc 25644821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 28496336 - 28496105
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| ||||||||||||||||||| | |||||| |||||||||||||||      | |||||||||||| |||||| |||||||||||||||||||||    
T  28496336 tcaactcgtgcgacaaagatcgcattaa-cctaaacaaggcattctgtaacacaagtactcgcgaggcgagagcctctgctcgccatggcgagttcaggt 28496238  T
Q  101 gtaactctcaaaacttg--ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctc 198  Q
       | |||||||| ||   |||| || |  ||||| ||||||||| | ||| || ||||| ||||||||||||||||||||||| |||||||||| | ||    
T  28496237 cagattctcaaaagtttcattct-aagtctttccaggttcaatctcattctacattcttttctaatcattattagacatgttcaggcactcaaaagcatc 28496139  T
Q  199 taaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||| ||||||||||||| ||||| ||||||||    
T  28496138 taaggatcaactcaaaagttaaaatcacgaaatc 28496105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 62 - 246
Target Start/End: Complemental strand, 25956424 - 25956239
Alignment:
Q  62 gcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcc 160  Q
    |||||||||| |||||||||||||||||||| | ||||||||||||  |||| |   |||||||| ||||||| ||| ||||| |||||  ||||||| |    
T  25956424 gcgaggcgagagcctctactcgccatggcgaatacaggtgtaactccaaaaaatccattcttaaactattccaggttaaatctcaatctagaatcttttc 25956325  T
Q  161 taatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
     |||| | |||||||||||||| |||||||||||  |||||| ||||||| |||||||||||||||||||||  || |||||||||    
T  25956324 caatcgtaattagacatgttcaggcactcaaaaatatctaagattcaacttaaaagtcaaaattacgaaatcatgacagctctctg 25956239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 8 - 246
Target Start/End: Original strand, 18456981 - 18457217
Alignment:
Q  8 gtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactc 107  Q
    |||||||||||||||||   ||||| || ||||| |||||||| | | ||| |||||||||||| |||||||||||||||||| |||||||||     ||    
T  18456981 gtgcgacaaagatcgcaaa-atcctgaacaaggc-ttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggctagttcaggtcagcttc 18457078  T
Q  108 tcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttc 206  Q
      |||| ||  ||||||| ||| |||| ||||||||| | ||| || ||||||||||||||||||| ||||||||| |||||||||| | ||||||| ||    
T  18457079 caaaaagttcattcttaa-ttaatccaggttcaatctcattctacattctttcctaatcattattaaacatgttcaggcactcaaaagcatctaaggatc 18457177  T
Q  207 aactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    ||||||||||| ||||| |||||||  |||||||||||||    
T  18457178 aactcaaaagttaaaatcacgaaatttggatagctctctg 18457217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 29808747 - 29808515
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| ||||||||||||||||||| | |||||| |||||||||||||||      | |||||||||||| |||||| |||||||||||||||||||||    
T  29808747 tcaactcgtgcgacaaagatcgcattaa-cctaaacaaggcattctgtaacacaagtactcgcgaggcgagagcctctgctcgccatggcgagttcaggt 29808649  T
Q  101 gtaactctcaaaacttg-ttcttaaattatt-ccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctc 198  Q
       | || ||||  ||  |||| ||| | || ||| ||||||||| | ||| || ||||| ||||||||||||||||||||||| |||||||||| | ||    
T  29808648 cagattcccaaagtttcattctaaaaatctttccaggttcaatctcattctacattcttttctaatcattattagacatgttcaggcactcaaaagcatc 29808549  T
Q  199 taaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||| ||||||||||||| ||||| ||||||||    
T  29808548 taaggatcaactcaaaagttaaaatcacgaaatc 29808515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 128 - 232
Target Start/End: Complemental strand, 20638030 - 20637926
Alignment:
Q  128 attccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacg 227  Q
    |||||| ||||||||| |  || || ||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||    
T  20638030 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaattacg 20637931  T
Q  228 aaatc 232  Q
    |||||    
T  20637930 aaatc 20637926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 129 - 232
Target Start/End: Original strand, 1561689 - 1561792
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||| ||||||||| | ||| |  ||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||| |||||    
T  1561689 ttccaggttcaatctcattctactttctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaatacga 1561788  T
Q  229 aatc 232  Q
    ||||    
T  1561789 aatc 1561792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 2 - 222
Target Start/End: Complemental strand, 4668075 - 4667855
Alignment:
Q  2 caacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtg 101  Q
    ||||| ||||||||| ||||||||||| ||||   |||||||||||||| | |  |  |||||||||||| ||||||||||||||||||||||||||||     
T  4668075 caactcgtgcgacaaggatcgcatttaacctagc-aaggcattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatggcgagttcaggtt 4667977  T
Q  102 taactctcaaaactt-gttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctcta 200  Q
     |  || ||||| ||  |||| || |  ||||| || |||||| | ||| || |||||||||||| ||||||||| |||||| |||||||||| | ||||    
T  4667976 cagttcacaaaaattcattctaaactctttccaggtccaatctcactctacattctttcctaatcgttattagacttgttcaggcactcaaaagcatcta 4667877  T
Q  201 aggttcaactcaaaagtcaaaa 222  Q
    ||| ||| ||||||||||||||    
T  4667876 agggtcatctcaaaagtcaaaa 4667855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 135 - 232
Target Start/End: Complemental strand, 19303270 - 19303173
Alignment:
Q  135 gttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||| | ||| || ||||||||||||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||||||| ||||||||    
T  19303270 gttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacgaaatc 19303173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 129 - 232
Target Start/End: Complemental strand, 22779962 - 22779859
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||| ||||||||| |  || || ||||||||||||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||||||| ||||    
T  22779962 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacga 22779863  T
Q  229 aatc 232  Q
    ||||    
T  22779862 aatc 22779859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 17287506 - 17287428
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||||||| ||||||||    
T  17287506 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaagggtcaactcaaaagtcaaaatcacgaaatc 17287428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 128 - 246
Target Start/End: Complemental strand, 18821566 - 18821448
Alignment:
Q  128 attccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacg 227  Q
    |||||| ||||||||| |  || || ||| ||||||||||||||| ||||||||| |||||||||| | ||||||||||||||||||||||||||| |||    
T  18821566 attccaggttcaatctcatcctacattctctcctaatcattattaaacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaatcacg 18821467  T
Q  228 aaatccggatagctctctg 246  Q
    ||||  |||||||| ||||    
T  18821466 aaatttggatagctttctg 18821448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 128 - 232
Target Start/End: Complemental strand, 16920380 - 16920276
Alignment:
Q  128 attccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacg 227  Q
    |||||| || ||||||||  || || ||||| |||||||||||||||||| |||| |||||||||| | |||||||||||||||||||||||||| ||||    
T  16920380 attccaggtacaatcttatcctacattcttttctaatcattattagacatattcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaatacg 16920281  T
Q  228 aaatc 232  Q
    |||||    
T  16920280 aaatc 16920276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 128 - 232
Target Start/End: Complemental strand, 20360707 - 20360603
Alignment:
Q  128 attccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacg 227  Q
    |||||| ||||||||| |  || || ||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||| |||||||||||  |||    
T  20360707 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggatcaactgaaaagtcaaaaacacg 20360608  T
Q  228 aaatc 232  Q
    |||||    
T  20360607 aaatc 20360603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 60 - 222
Target Start/End: Complemental strand, 4185628 - 4185465
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatcttt 158  Q
    |||||||||||| ||||||||||||||||||||||||||||  |  || ||||| ||  |||| || |  ||||| ||||||||| | ||| || |||||    
T  4185628 tcgcgaggcgagagcctctactcgccatggcgagttcaggttcagttcacaaaaattcattctaaactctttccaggttcaatctcactctacattcttt 4185529  T
Q  159 cctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    | ||||| ||||||||| |||||| |||||||||| | ||||||| ||| ||||||||||||||    
T  4185528 cataatcgttattagacttgttcatgcactcaaaagcatctaagggtcatctcaaaagtcaaaa 4185465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 232
Target Start/End: Complemental strand, 25611429 - 25611355
Alignment:
Q  158 tcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||||||| |||||||||  | ||||||||||||||||||||||||||| ||||||||    
T  25611429 tcctaatcattattagacatgttcaggcactcaaaggcatctaaggttcaactcaaaagtcaaaatcacgaaatc 25611355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 222
Target Start/End: Complemental strand, 4674922 - 4674702
Alignment:
Q  2 caacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtg 101  Q
    ||||| ||||||||| ||||||||||| ||||   |||||||||||||| | |  |  |||||||||||| |||||||||||||||| |||||| ||||     
T  4674922 caactcgtgcgacaaggatcgcatttaacctagc-aaggcattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatgacgagttaaggtt 4674824  T
Q  102 taactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctcta 200  Q
     |  || ||||| ||  |||| || |  ||||| || |||||| | ||| || |||||||||||| ||||||||| |||||| |||||||||| | ||||    
T  4674823 cagttcacaaaaattcattctaaactctttccaggtccaatctcactctacattctttcctaatcgttattagacttgttcaggcactcaaaagcatcta 4674724  T
Q  201 aggttcaactcaaaagtcaaaa 222  Q
    ||| ||| ||||||||||||||    
T  4674723 agggtcatctcaaaagtcaaaa 4674702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 129 - 233
Target Start/End: Complemental strand, 18409562 - 18409458
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||| ||||||||| | ||| || |||||||||||||||| |||||||||| | |||||||||| | ||||||| |||||||||| |||||||| ||||    
T  18409562 ttccaggttcaatctcattctacattctttcctaatcattaatagacatgttaaggcactcaaaagcatctaaggatcaactcaaaggtcaaaatcacga 18409463  T
Q  229 aatcc 233  Q
    |||||    
T  18409462 aatcc 18409458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 158 - 232
Target Start/End: Complemental strand, 15894136 - 15894062
Alignment:
Q  158 tcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||| ||||||||||||||| |||||||||  | |||||||||||||||||||||||||| |||||||||    
T  15894136 tcctaatcaatattagacatgttcaggcactcaaaggcatctaaggttcaactcaaaagtcaaaagtacgaaatc 15894062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 158 - 232
Target Start/End: Complemental strand, 22334588 - 22334514
Alignment:
Q  158 tcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||| ||||||||||||||| |||||||||  | ||||||||||||||||||||||||| ||||||||||    
T  22334588 tcctaatcaatattagacatgttcaggcactcaaaggcatctaaggttcaactcaaaagtcaaatttacgaaatc 22334514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 222
Target Start/End: Original strand, 4189215 - 4189435
Alignment:
Q  2 caacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtg 101  Q
    ||||| ||||||||| ||||||||||| ||||   |||||||||||||| | |  |  |||||||||||| |||||||||||||||| |||||| ||||     
T  4189215 caactcgtgcgacaacgatcgcatttaacctagc-aaggcattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatgacgagtttaggtt 4189313  T
Q  102 taactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctcta 200  Q
     |  || ||||| ||  |||| || |  ||||| || |||||| | ||| || |||||||||||| ||||||||| |||||| |||||||||| | ||||    
T  4189314 cagttcacaaaaattcattctaaactctttccaggtccaatctcactctacattctttcctaatcgttattagacttgttcaggcactcaaaagcatcta 4189413  T
Q  201 aggttcaactcaaaagtcaaaa 222  Q
    ||| ||| ||||||||| ||||    
T  4189414 agggtcatctcaaaagtaaaaa 4189435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 232
Target Start/End: Original strand, 22831908 - 22831980
Alignment:
Q  160 ctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||| |||||||||||||||  ||||||||| | |||||||||||||||||||||||||| |||||||||    
T  22831908 ctaatcaatattagacatgttcaaacactcaaaagcatctaaggttcaactcaaaagtcaaaaatacgaaatc 22831980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 232
Target Start/End: Original strand, 21939642 - 21939872
Alignment:
Q  2 caacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaa--ctagtcaattcgcgaggcgagggcctctactcgccatggcgagttcagg 99  Q
    ||||| ||||||||| |||| |||||| |||||| ||| ||||||||||  |||||    |||||||||||| |||||| |||||||||||||||||||     
T  21939642 caactcgtgcgacaaggatcacatttaacctaaacaagacattctgtaatactagtgc--tcgcgaggcgagagcctctgctcgccatggcgagttcag- 21939738  T
Q  100 tgtaactctcaaaacttgttct-taaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctc 198  Q
    |   | |||| ||| || |  | ||| |  ||||| | ||||||| |  || || ||||||||||||| ||||| ||||||||| ||||||||   | ||    
T  21939739 tcagattctccaaagttttattctaagtctttccaggctcaatctcatcctacattctttcctaatcaatattacacatgttcaggcactcaagggcatc 21939838  T
Q  199 taaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||||||| ||||||||    
T  21939839 taaggttcaactcaaaagtcaaaatcacgaaatc 21939872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 60 - 232
Target Start/End: Complemental strand, 25629160 - 25628987
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatcttt 158  Q
    |||||||||||| |||||| ||||||| ||||||| |||||   | || ||||| ||  |||| ||||  ||||| ||||||||| | ||| |||| |||    
T  25629160 tcgcgaggcgagagcctctgctcgccacggcgagtacaggtcataatcacaaaagtttattctaaaatatttccaggttcaatctcattctacaatattt 25629061  T
Q  159 cctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||| |||| ||||| | || || || ||| |||||||||||||| |||||||||||| | ||||||    
T  25629060 cctaatcattaatagagatgtttaggcgcttaacaacatctaaggttcaactaaaaagtcaaaatcatgaaatc 25628987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 60 - 228
Target Start/End: Original strand, 29060856 - 29061025
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatcttt 158  Q
    |||||||||||| ||||||||||| | ||||||||||||||   | |  ||||| ||  ||||  |||  ||||| ||||||||| |  || || || ||    
T  29060856 tcgcgaggcgagagcctctactcgtcgtggcgagttcaggtcagatttccaaaagttcattctacaatctttccaggttcaatctcatcctacattcctt 29060955  T
Q  159 cctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||||||||||| |||||||||| |||||||||| | ||||||| |||||||||||||| |||| ||||    
T  29060956 cctaatcattattggacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcgaaatcacga 29061025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 232
Target Start/End: Original strand, 19863395 - 19863466
Alignment:
Q  161 taatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||| ||| ||| ||| |||| |||||||||||| |||||||||||||||||||||||||| |||||||||    
T  19863395 taatctttaataggcatcttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaactacgaaatc 19863466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 232
Target Start/End: Original strand, 20594159 - 20594262
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||| ||||||||| |  || || |||| |||||||||  ||||||||||| | |||||||||||| ||||||| ||||||||||||| ||||| ||||    
T  20594159 ttccaggttcaatctcatcctacattcttccctaatcatatttagacatgtttaggcactcaaaaacatctaaggatcaactcaaaagtaaaaatcacga 20594258  T
Q  229 aatc 232  Q
    ||||    
T  20594259 aatc 20594262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 22439230 - 22439288
Alignment:
Q  174 acatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||| |||| |||||||||||| |||||||||||||||||||||||||||||| |||||    
T  22439230 acatcttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaattacaaaatc 22439288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 232
Target Start/End: Complemental strand, 25603091 - 25603017
Alignment:
Q  158 tcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||||||| |||||||||  | | | ||||||||||||||||| ||||| ||||||||    
T  25603091 tcctaatcattattagacatgttcaggcactcaaaggcgtttcaggttcaactcaaaagttaaaatcacgaaatc 25603017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 231
Target Start/End: Original strand, 18180927 - 18180974
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaat 231  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||    
T  18180927 gcactcaaaaacatctaaggttcaactcaaaagtcaaaatcacgaaat 18180974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 232
Target Start/End: Original strand, 22432667 - 22432738
Alignment:
Q  161 taatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||| ||| || |||| |||| |||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  22432667 taatctttaatatacatcttcatgcactcaaaaacatctaaggttcaactcaaaagtcaaaactacaaaatc 22432738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 222
Target Start/End: Complemental strand, 31155133 - 31155040
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    ||||| ||||||||| | ||| || ||||||| |||| ||||||||| | |||| |||||||||| | ||||||| ||| ||||||||||||||    
T  31155133 ttccaggttcaatctcattctacattctttcccaatcgttattagacttattcaggcactcaaaagcatctaagggtcatctcaaaagtcaaaa 31155040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 232
Target Start/End: Original strand, 11185908 - 11185980
Alignment:
Q  160 ctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||| |||| |||||||||| |||||||||  | ||||||||||||||||||| |||||  |||||||||    
T  11185908 ctaatcaatattcgacatgttcaggcactcaaaggcatctaaggttcaactcaaaaatcaaatatacgaaatc 11185980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 15041248 - 15041184
Alignment:
Q  167 ttattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaat 231  Q
    |||||| |||| |||| |||||||||||| ||||||||  |||||||||||||||||||| ||||    
T  15041248 ttattaaacatcttcaggcactcaaaaacatctaaggtataactcaaaagtcaaaattacaaaat 15041184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 232
Target Start/End: Complemental strand, 25641887 - 25641816
Alignment:
Q  161 taatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||| ||| || |||| |||| |||||||||||| |||||||||||||||||||||| ||| ||| |||||    
T  25641887 taatctttaatatacatcttcaggcactcaaaaacatctaaggttcaactcaaaagtccaaactacaaaatc 25641816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 19668631 - 19668728
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcagg 99  Q
    |||||| ||||||||||| || |||||| |||||  ||||  |||||||| | | ||  |||||||||||| |||||||||||| ||||||||||||||    
T  19668631 tcaactcgtgcgacaaaggtcacatttaacctaac-aaggtgttctgtaattggacagctcgcgaggcgagagcctctactcgctatggcgagttcagg 19668728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 21739703 - 21739665
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  21739703 gcactcaaaaacatctaaggttcaactcaaaagtcaaaa 21739665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 27415632 - 27415586
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||| || ||||||||||||||||||||||||||| ||||||||    
T  27415632 actcaaagacatctaaggttcaactcaaaagtcaaaatcacgaaatc 27415586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 97
Target Start/End: Original strand, 17106049 - 17106086
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttca 97  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  17106049 tcgcgagtcgagggcctctactcgccatggcgagttca 17106086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 97
Target Start/End: Complemental strand, 18177471 - 18177438
Alignment:
Q  64 gaggcgagggcctctactcgccatggcgagttca 97  Q
    ||||||||||||||||||||||||||||||||||    
T  18177471 gaggcgagggcctctactcgccatggcgagttca 18177438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 97
Target Start/End: Original strand, 18204400 - 18204433
Alignment:
Q  64 gaggcgagggcctctactcgccatggcgagttca 97  Q
    ||||||||||||||||||||||||||||||||||    
T  18204400 gaggcgagggcctctactcgccatggcgagttca 18204433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 18821625 - 18821585
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  18821625 tcgcgaggcgagagcctctgctcgccatggcgagttcaggt 18821585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1561560 - 1561603
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcatt 44  Q
    |||||| ||||||||||||||||||||| |||||| ||||||||    
T  1561560 tcaactcgtgcgacaaagatcgcatttaacctaaacaaggcatt 1561603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 226
Target Start/End: Complemental strand, 16523081 - 16523042
Alignment:
Q  187 ctcaaaaacctctaaggttcaactcaaaagtcaaaattac 226  Q
    ||||||| | ||||||||||||||||||||||||||||||    
T  16523081 ctcaaaagcatctaaggttcaactcaaaagtcaaaattac 16523042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 210
Target Start/End: Original strand, 20109607 - 20109682
Alignment:
Q  135 gttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaact 210  Q
    ||||||||| |||||  || ||| |||||||||||||| ||||||||| ||||||| || | ||||| ||||||||    
T  20109607 gttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactcagaatcatctaaagttcaact 20109682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 97
Target Start/End: Complemental strand, 18199212 - 18199182
Alignment:
Q  67 gcgagggcctctactcgccatggcgagttca 97  Q
    |||||||||||||||||||||||||||||||    
T  18199212 gcgagggcctctactcgccatggcgagttca 18199182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 21834571 - 21834533
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||| | ||||||||||||||||||||||||||    
T  21834571 gcactcaaaagcatctaaggttcaactcaaaagtcaaaa 21834533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 11185820 - 11185857
Alignment:
Q  63 cgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  11185820 cgaggcgagggcctctgctcgccgtggcgagttcaggt 11185857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 97
Target Start/End: Original strand, 35008466 - 35008503
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttca 97  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  35008466 tcgcgaggcgagagcctctactcgctatggcgagttca 35008503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 16830112 - 16830152
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||| |||||||||||||| |||||||| ||||    
T  16830112 tcgcgaggcgagagcctctactcgccacggcgagttaaggt 16830152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 16920439 - 16920399
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||| ||||||| |||||| |||||||||||||||||||||    
T  16920439 tcgcaaggcgagagcctctgctcgccatggcgagttcaggt 16920399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 20360766 - 20360726
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||| |||||  |||||||||||||||||||||    
T  20360766 tcgcgaggcgagagcctcagctcgccatggcgagttcaggt 20360726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 22831817 - 22831857
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  22831817 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 22831857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 98
Target Start/End: Complemental strand, 23527908 - 23527872
Alignment:
Q  62 gcgaggcgagggcctctactcgccatggcgagttcag 98  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  23527908 gcgaggcgagggcctctactcgctatggtgagttcag 23527872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 25611529 - 25611489
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||| |||||| ||| |||||||||||||||||    
T  25611529 tcgcgaggcgagagcctctgctctccatggcgagttcaggt 25611489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 121; Significance: 4e-62; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 6870 - 7102
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| ||||||||||||||||||||| |||||| || ||||||| ||||| || |  | |||||||||||||||||||||||||||||||||||||||    
T  6870 tcaactcgtgcgacaaagatcgcatttaacctaaacaatgcattctataactggttagcttgcgaggcgagggcctctactcgccatggcgagttcaggt 6969  T
Q  101 gtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
    |||| || ||||| |   |||||||| ||||||| |||||||||||||||  |||||||||||||||| |||| ||||||| | |||||||||||| |||    
T  6970 gtaattcccaaaaatccattcttaaactattccaggttcaatcttaatctataatctttcctaatcatcattatacatgtttaggcactcaaaaacatct 7069  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||| ||| |||||||||||||||||    
T  7070 aaggttcaacttaaaggtcaaaattacgaaatc 7102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 14250 - 14482
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| ||||||||||||||||||||| |||||| || ||||||| ||||| || |  | |||||||||||||||||||||||||||||||||||||||    
T  14250 tcaactcgtgcgacaaagatcgcatttaacctaaacaatgcattctataactggttagcttgcgaggcgagggcctctactcgccatggcgagttcaggt 14349  T
Q  101 gtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
    |||| || ||||| |   |||||||| ||||||| |||||||||||||||  |||||||||||||||| |||| ||||||| | |||||||||||| |||    
T  14350 gtaattcccaaaaatccattcttaaactattccaggttcaatcttaatctataatctttcctaatcatcattatacatgtttaggcactcaaaaacatct 14449  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||| ||| |||||||||||||||||    
T  14450 aaggttcaacttaaaggtcaaaattacgaaatc 14482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 119; Significance: 7e-61; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 387 - 633
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| || |||||||||||||||||| | |||  ||| |||||||||||| |   | |||||||||||| |||||| |||||||||||||||||||||    
T  387 tcaactcgtacgacaaagatcgcatttaacataagcaagacattctgtaactgggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggt 486  T
Q  101 gtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
    | ||||| ||||| ||  |||| ||||  ||||||||||||||| | |||||||||||||||||||||||||||||||||| | |||||||||||  |||    
T  487 gcaactcacaaaaattcattctaaaatctttccaagttcaatctcattctccaatctttcctaatcattattagacatgtttaggcactcaaaaaagtct 586  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    |||| |||| ||||||||||||||||||||||| |||||||||||||    
T  587 aaggatcaattcaaaagtcaaaattacgaaatctggatagctctctg 633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 45654 - 45407
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| |||||||||||||||||||||||||||| ||| ||||||||||||||| |  |||||||||||| ||||||||||||||||||||||||||||    
T  45654 tcaactcgtgcgacaaagatcgcatttatcctaaacaagacattctgtaactagttagctcgcgaggcgagagcctctactcgccatggcgagttcaggt 45555  T
Q  101 gtaactctcaaaacttg--ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctc 198  Q
      || || |||||  |   |||| || |  | ||| ||||||||| | || |||||||||||||||||||||||||||| |||| |||||||||||| ||    
T  45554 acaattcacaaaaaattcattctaaagtcttaccaggttcaatctcattccccaatctttcctaatcattattagacatattcaggcactcaaaaacatc 45455  T
Q  199 taaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    ||||| ||||||||||||| |||||||| ||||| |||||||||||||    
T  45454 taaggatcaactcaaaagtaaaaattacaaaatctggatagctctctg 45407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 113; Significance: 3e-57; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 15694 - 15462
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| |||||||||||||| |||||| | |||| |||||||||||||||| || |  |||||||||||||||||||||||||||||||||||||| ||    
T  15694 tcaactcgtgcgacaaagatcacatttaacataaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccatggcgagttcatgt 15595  T
Q  101 gtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
    |||| ||  |||| |   |||||||| ||||||| ||||||||| |||||  |||||||||||||||| |||| ||||||| | |||||||||||| |||    
T  15594 gtaattccgaaaaatccattcttaaactattccaggttcaatctcaatctataatctttcctaatcatcattatacatgtttaggcactcaaaaacatct 15495  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||| |||||| ||||||||||||||    
T  15494 aaggttcaacttaaaagttaaaattacgaaatc 15462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 232
Target Start/End: Original strand, 179085 - 179138
Alignment:
Q  179 ttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||| ||||| |||||| |||||||| |||||||||||||||||||| ||||||    
T  179085 ttcaggcactgaaaaacatctaaggtccaactcaaaagtcaaaattatgaaatc 179138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 111; Significance: 4e-56; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 19523 - 19769
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||||||| ||||||||||| | |||  ||| |||||||||||| |   |||||||||||||| |||||| |||||||||||||||||||||    
T  19523 tcaacttgtgcgacaaggatcgcatttaacataagcaagacattctgtaactgggtcattcgcgaggcgagagcctctgctcgccatggcgagttcaggt 19622  T
Q  101 gtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
    | ||| |  |||| ||  |||| ||||  ||||| ||||||||| | ||||||||| |||||||||||||||||||||||||| |||||||||||| |||    
T  19623 gcaacacataaaaattcattctaaaatctttccaggttcaatctcattctccaatccttcctaatcattattagacatgttcaggcactcaaaaacatct 19722  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    |||| |||||||| ||||||||||||| |||||  ||||||||||||    
T  19723 aaggatcaactcagaagtcaaaattacaaaatctagatagctctctg 19769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 232
Target Start/End: Complemental strand, 48140 - 48093
Alignment:
Q  185 cactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||| ||||||||||| ||||||||||||||| || |||||    
T  48140 cactcaaaaacatctaaggttcatctcaaaagtcaaaatcacaaaatc 48093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 111; Significance: 4e-56; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 160942 - 161188
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| |||||||||||||| ||||||||||||  ||| ||||||||||||||| |  ||| |||| ||| |||||||||||||||||||| |||||||    
T  160942 tcaactcgtgcgacaaagatcacatttatcctaaccaagacattctgtaactagttacctcgtgaggtgagagcctctactcgccatggcgacttcaggt 161041  T
Q  101 gtaactctcaaaacttgttcttaaattat-tccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
      |  || ||||| ||  |  |||| | | |||| ||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  161042 tcagttcacaaaaattcattctaaagtctctccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatct 161141  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    |||| |||||||||||||||||||||||||||  |||||||||||||    
T  161142 aaggatcaactcaaaagtcaaaattacgaaatttggatagctctctg 161188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 97
Target Start/End: Complemental strand, 162904 - 162867
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttca 97  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  162904 tcgcgaggcgagcgcctctactcgctatggcgagttca 162867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 897 - 660
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||| ||||||||||||||||||| |||||| |||||||| ||||||| |  |||||||||||||||||||||||||||| | |||||||||||||    
T  897 tcaacttgcgcgacaaagatcgcatttaacctaaacaaggcattatgtaactgggtaattcgcgaggcgagggcctctactcgctaaggcgagttcaggt 798  T
Q  101 gtaactctcaaaacttgttcttaaattattccaagttcaatcttaatctc------caatctttcctaatcattattagacatgttcacgcactcaaaaa 194  Q
    | ||||| |||||    | |||||| |||| || ||||||||| ||||||      |||||||||||||||||||||| ||||||||| |||||||||||    
T  797 gcaactcacaaaatccatccttaaactattacaggttcaatctcaatctcaatctacaatctttcctaatcattattatacatgttcaggcactcaaaaa 698  T
Q  195 cctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    | |||||| ||||||| ||| ||||||  |||||||||    
T  697 catctaagattcaacttaaaggtcaaatctacgaaatc 660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 28673 - 28427
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| ||||||||||||||||||||| |||||| |||||||||||||||      | |||||||||||| |||||| |||||||||||||||||||||    
T  28673 tcaactcgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaacacaagtactcgcgaggcgagagcctctgctcgccatggcgagttcaggt 28574  T
Q  101 gtaactctcaaaacttgttcttaaattattccaag-ttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
      |  || ||||| ||  |  |||| | |||  || |||||||| | |||||||||||||||||||||||||||||||||||| |||||||||| | |||    
T  28573 tcagttcacaaaatttcattctaaagtcttcgtaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaagcatct 28474  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    |||| |||||||||||||||||| ||||||||| |||||||||||||    
T  28473 aaggatcaactcaaaagtcaaaagtacgaaatctggatagctctctg 28427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 32340 - 32586
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| ||||||||||||||||||||| |||||| |||||||| ||||||      | |||||||| ||| |||||| |||||||||||||||||||||    
T  32340 tcaactagtgcgacaaagatcgcatttaacctaaacaaggcattatgtaacacaagtactcgcgaggtgagagcctctgctcgccatggcgagttcaggt 32439  T
Q  101 gtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
      |  || ||||| ||  |||| || |  ||||| ||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  32440 tcagttcacaaaatttcattctaaagtctttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatct 32539  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    |||| |||||||||||||||||||||| ||||| | |||||||||||    
T  32540 aaggatcaactcaaaagtcaaaattacaaaatctgaatagctctctg 32586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 132910 - 133156
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaa--ctagtcaattcgcgaggcgagggcctctactcgccatggcgagttcag 98  Q
    |||||| |||||||||||||| |||||| |||||| |||||||| |||||  | |||  | |||||||||||| |||||| |||||||||||||||||||    
T  132910 tcaactcgtgcgacaaagatcacatttaacctaaacaaggcattatgtaagacaagt--actcgcgaggcgagagcctctgctcgccatggcgagttcag 133007  T
Q  99 gtgtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacct 197  Q
    ||  |  || ||||| ||  |||| || |  ||||| ||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  133008 gttcagttcacaaaatttcattctaaagtctttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacat 133107  T
Q  198 ctaaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    |||||| |||||||||||||||||||||||||||| |  ||||||||||    
T  133108 ctaaggatcaactcaaaagtcaaaattacgaaatctgagtagctctctg 133156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 5985 - 5754
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||| ||||||||||||||||||| |||||| |||||||| ||||||| |  |||||||||||||||||||||||||||| | |||||||||||||    
T  5985 tcaacttgcgcgacaaagatcgcatttaacctaaacaaggcattatgtaactgggtaattcgcgaggcgagggcctctactcgctaaggcgagttcaggt 5886  T
Q  101 gtaactctcaaaacttgttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctcta 200  Q
    | || || |||||    | |||||| |||| |  ||||||||| ||||| |||| ||||||||||||||||| ||||||||| | |||||||||| ||||    
T  5885 gcaaatcacaaaatccatccttaaactattactggttcaatctcaatctacaatttttcctaatcattattatacatgttcaggtactcaaaaacatcta 5786  T
Q  201 aggttcaactcaaaagtcaaaattacgaaatc 232  Q
    || ||||||| ||| ||||||  |||||||||    
T  5785 agattcaacttaaaggtcaaatctacgaaatc 5754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 99; Significance: 6e-49; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 32794 - 33003
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| ||||||||||||||||||||| || ||  |||||||||||||||| |  |  |||||||||||||||||||||||||||||||||||||||||    
T  32794 tcaactcgtgcgacaaagatcgcatttaacccaac-aaggcattctgtaactgggtagctcgcgaggcgagggcctctactcgccatggcgagttcaggt 32892  T
Q  101 gtaactctcaaaact-tgttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
    ||||||| ||||| |   |||||| | ||||||||||||||||| |||||  ||||||||||||||||||||| ||||||||| ||||||| || | |||    
T  32893 gtaactcccaaaaatccattcttagactattccaagttcaatctcaatctagaatctttcctaatcattattacacatgttcaggcactcagaatcatct 32992  T
Q  200 aaggttcaact 210  Q
    || ||||||||    
T  32993 aaagttcaact 33003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 246
Target Start/End: Complemental strand, 51619 - 51502
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||| ||||||||| |  || || ||| ||||||||||||||| ||||||||| |||||||||| | ||||||| ||||||||||||||||||| ||||    
T  51619 ttccaggttcaatctcatcctacattctctcctaatcattattaaacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacga 51520  T
Q  229 aatccggatagctctctg 246  Q
    |||  |||||||||||||    
T  51519 aatttggatagctctctg 51502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 10786 - 11017
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| |||||||| |||||||||||| |||||  |||||||| || ||||||  || |||||||||||| |||||||||||| |||||||||||||||    
T  10786 tcaactcgtgcgacagagatcgcatttaacctaac-aaggcattttggaactaggtaactcgcgaggcgagagcctctactcgctatggcgagttcaggt 10884  T
Q  101 gtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
    ||||||| ||||| ||  |||||||| ||||||| ||||||||| | |||   |||||||||||||||||||| ||||||||| |||||||||||| |||    
T  10885 gtaactcacaaaaattcattcttaaactattccaggttcaatctcagtctaggatctttcctaatcattattacacatgttcaggcactcaaaaacatct 10984  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||| ||||||| ||   |||||| |||||||||    
T  10985 aagattcaacttaaggatcaaaactacgaaatc 11017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 94; Significance: 6e-46; HSPs: 2)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 118 - 243
Target Start/End: Original strand, 5968 - 6093
Alignment:
Q  118 ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagt 217  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||| |||||| ||||||    
T  5968 ttcttaaactattccaagttcaatctcaatctccaatctttcctaatcattattagacctgttcaggcactcaaaaacatctaaggatcaactaaaaagt 6067  T
Q  218 caaaattacgaaatccggatagctct 243  Q
    ||||||||||||||| ||||||||||    
T  6068 caaaattacgaaatctggatagctct 6093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 5901 - 5952
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaact 52  Q
    ||||||||||||||||  ||| |||||| |||||| ||||||||||||||||    
T  5901 tcaacttgtgcgacaagaatcacatttagcctaaataaggcattctgtaact 5952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 2666 - 2421
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| ||||||||| |||| ||||| ||||||| |||||||||||||||      | |||||||||||| ||||||||||||||||||||||||||||    
T  2666 tcaactcgtgcgacaaggatcacatttttcctaaacaaggcattctgtaacacaagtactcgcgaggcgagagcctctactcgccatggcgagttcaggt 2567  T
Q  101 gtaactctcaaaacttgttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctcta 200  Q
      |  || ||||  |  |||| ||||  || || |||||| || | |||||||||||||||||||||||||||||||||||| | |||||||| | ||||    
T  2566 tcagttcacaaatttcattctaaaatctttacaggttcaaactcattctccaatctttcctaatcattattagacatgttcaggtactcaaaagcatcta 2467  T
Q  201 aggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    ||| ||| | ||||||||||||||| |||||| | |||||||||||    
T  2466 aggatcatcccaaaagtcaaaattatgaaatctgaatagctctctg 2421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 86; Significance: 3e-41; HSPs: 8)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 129 - 246
Target Start/End: Original strand, 62947 - 63064
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||| ||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||| ||||||    
T  62947 ttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcatgcactcaaaaacatctaaggatcaactcaaaagtcaaatttacga 63046  T
Q  229 aatccggatagctctctg 246  Q
    |||| |||||||||||||    
T  63047 aatctggatagctctctg 63064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 124993 - 125071
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||||||| || |||||    
T  124993 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcaccaaatc 125071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 232
Target Start/End: Original strand, 175205 - 175253
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  175205 gcactcaaaaacatctaaggttcaactcaaaagtcaaaattacgaaatc 175253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 206
Target Start/End: Complemental strand, 136020 - 135949
Alignment:
Q  135 gttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttc 206  Q
    ||||||||| |||||  || ||| |||||||||||||| ||||||||| ||||||| |  ||||||||||||    
T  136020 gttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaagcactcagagtcctctaaggttc 135949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 99
Target Start/End: Complemental strand, 136171 - 136132
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcagg 99  Q
    |||||||||||| |||||||||||| ||||||||||||||    
T  136171 tcgcgaggcgagagcctctactcgctatggcgagttcagg 136132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 206
Target Start/End: Complemental strand, 144728 - 144657
Alignment:
Q  135 gttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttc 206  Q
    ||||||||| |||||  || ||| |||||||||||||| ||||||||| ||||||| |  ||||||||||||    
T  144728 gttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaagcactcagagtcctctaaggttc 144657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 99
Target Start/End: Complemental strand, 144879 - 144840
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcagg 99  Q
    |||||||||||| |||||||||||| ||||||||||||||    
T  144879 tcgcgaggcgagagcctctactcgctatggcgagttcagg 144840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 124900 - 124940
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  124900 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 124940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 232
Target Start/End: Complemental strand, 7912 - 7689
Alignment:
Q  9 tgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactct 108  Q
    |||||||||||||||||||| ||||   ||||||||||| ||| ||  || |||||||||||| |||||||||||| |||||||||||||||||||| |     
T  7912 tgcgacaaagatcgcatttaacctagc-aaggcattctggaacaaggtaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaacccc 7814  T
Q  109 caaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttca 207  Q
    ||||| ||  |||||||| ||||| | ||||||||| | |||   |||||||||||||||||||| |||||||||  ||||||||||| |||||||||||    
T  7813 caaaaattcattcttaaactattctaggttcaatctcagtctaggatctttcctaatcattattacacatgttcagacactcaaaaacatctaaggttca 7714  T
Q  208 actcaaaagtcaaaattacgaaatc 232  Q
    ||| ||   |||||| |||||||||    
T  7713 acttaaggatcaaaactacgaaatc 7689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 8 - 244
Target Start/End: Complemental strand, 2158 - 1921
Alignment:
Q  8 gtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactc 107  Q
    ||||||||| ||||||||||| |||||| |||||||||||||||      | |||||||||||| |||||| || ||||||||||||||||||  |  ||    
T  2158 gtgcgacaaggatcgcatttaacctaaacaaggcattctgtaacacaagtactcgcgaggcgagagcctctgcttgccatggcgagttcaggttcagttc 2059  T
Q  108 tcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttc 206  Q
     ||||| ||  |||| || |  ||  | ||||||||| | ||||||||||||||||||||||||||||||||||||   |||||||||| ||||||| ||    
T  2058 acaaaatttcattctaaagtctttttatgttcaatctcattctccaatctttcctaatcattattagacatgttcagtgactcaaaaacatctaaggatc 1959  T
Q  207 aactcaaaagtcaaaattacgaaatccggatagctctc 244  Q
    |||||||||||||||| ||||||||  |||||||||||    
T  1958 aactcaaaagtcaaaaatacgaaatttggatagctctc 1921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 82; Significance: 8e-39; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 60 - 212
Target Start/End: Complemental strand, 43589 - 43436
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatcttt 158  Q
    |||||||||||| ||||||||||| |||||||||| |||||||||||| ||||| |   |||||||| ||||||| ||||||||| |||||  |||||||    
T  43589 tcgcgaggcgagagcctctactcgtcatggcgagtacaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcaatctagaatcttt 43490  T
Q  159 cctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactca 212  Q
     |||||||| |||||||||||||| |||||||||||| ||||||||||||||||    
T  43489 tctaatcataattagacatgttcaggcactcaaaaacatctaaggttcaactca 43436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 60 - 212
Target Start/End: Complemental strand, 47509 - 47356
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatcttt 158  Q
    |||||||||||| ||||||||||| |||||| ||| |||||||||||| ||||| |   |||||||| ||||||| ||||||||| |||||  |||||||    
T  47509 tcgcgaggcgagagcctctactcgtcatggctagtacaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcaatctagaatcttt 47410  T
Q  159 cctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactca 212  Q
     |||||||| |||||||||||||| |||||||||||| ||||||||||||||||    
T  47409 tctaatcataattagacatgttcaggcactcaaaaacatctaaggttcaactca 47356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 82; Significance: 8e-39; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 40036 - 39863
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| |||| |||||||||||||||| |||||| |||||||| |||||||||| |  |||||||||||| ||||||||| |||||||| |||||||||    
T  40036 tcaactcgtgcaacaaagatcgcatttaacctaaataaggcattttgtaactagttagctcgcgaggcgagagcctctacttgccatggcaagttcaggt 39937  T
Q  101 gtaactctcaaaactt-gttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattag 173  Q
     |||||| || || || ||||||||| ||||||| ||| ||| | ||||||||||||||||||| |||||||||    
T  39936 ataactcccacaagttcgttcttaaactattccaggttgaatgtcaatctccaatctttcctaaccattattag 39863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 63 - 246
Target Start/End: Original strand, 101714 - 101897
Alignment:
Q  63 cgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaacttgttcttaaattattccaagttcaatcttaatctccaatctttccta 162  Q
    |||||| || |||||| |||||||||||||||||||||  |  || ||||| |  |||| || |   |||| ||||||||| | ||||||||||||||||    
T  101714 cgaggcaagagcctctgctcgccatggcgagttcaggtcaagttcacaaaattcattctaaagtctctccaggttcaatctcattctccaatctttccta 101813  T
Q  163 atcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    |||||||||||||||||||| |||||||||||| ||||||| ||||||||||||| |||||||||||||| | | |||||||||    
T  101814 atcattattagacatgttcaggcactcaaaaacttctaaggatcaactcaaaagtaaaaattacgaaatctgaaaagctctctg 101897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 39702 - 39627
Alignment:
Q  171 tagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    ||||| |||||| |||||| ||||| ||||||| ||||||||||||||||||||| |||||| |||||||||||||    
T  39702 tagacctgttcaggcactcgaaaacatctaaggatcaactcaaaagtcaaaattatgaaatctggatagctctctg 39627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 60 - 246
Target Start/End: Original strand, 17096 - 17283
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatcttt 158  Q
    |||||||||||| |||||| |||||||||||||||||||||   | |||||||  ||  |||| ||||   |||| ||||||||| | ||| || |||||    
T  17096 tcgcgaggcgagagcctctgctcgccatggcgagttcaggtcatattctcaaagttttattctaaaatctatccaggttcaatctcattctacattcttt 17195  T
Q  159 cctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    |||||||||||||| ||||||||| |||||||||| | ||||||| ||||||||||||||||||| |||||||  |||||||||||||    
T  17196 cctaatcattattaaacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacgaaatttggatagctctctg 17283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 770 - 692
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||    
T  770 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaattacgaaatc 692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 855 - 815
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  855 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 67; Significance: 7e-30; HSPs: 3)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 152 - 246
Target Start/End: Complemental strand, 10280 - 10186
Alignment:
Q  152 aatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    ||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| |||||| |||||||||||||||||  ||||||||||||    
T  10280 aatctttactaatcattattagacatgttcaggcactcaaaaacatctaaggttcatctcaaaggtcaaaattacgaaatcatgatagctctctg 10186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 994 - 1068
Alignment:
Q  158 tcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||| ||||||||||||||  ||||||||| || |||||||||||||||||||||||||| |||||||||    
T  994 tcctaatcaatattagacatgttctagcactcaaagacatctaaggttcaactcaaaagtcaaaaatacgaaatc 1068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 10403 - 10292
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| |||| |||||||||||||||| |||||  |||||| | ||||||  | ||| |||||||||||| ||||||||||||  ||||||||||||||    
T  10403 tcaactcgtgcaacaaagatcgcatttaacctaac-aaggcagtatgtaacaggacaactcgcgaggcgagagcctctactcgctttggcgagttcaggt 10305  T
Q  101 gtaactctcaaaa 113  Q
    ||||||| |||||    
T  10304 gtaactcacaaaa 10292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 13318 - 13240
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||    
T  13318 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaattacgaaatc 13240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 67; Significance: 7e-30; HSPs: 4)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 336 - 414
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||    
T  336 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaattacgaaatc 414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 5112 - 5190
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||    
T  5112 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaattacgaaatc 5190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 100
Target Start/End: Original strand, 253 - 291
Alignment:
Q  62 gcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  253 gcgaggcgagagcctctgctcgccatggcgagttcaggt 291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 100
Target Start/End: Original strand, 5029 - 5067
Alignment:
Q  62 gcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  5029 gcgaggcgagagcctctgctcgccatggcgagttcaggt 5067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 67; Significance: 7e-30; HSPs: 4)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 167700 - 167622
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||    
T  167700 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaattacgaaatc 167622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 52298 - 52392
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaat 223  Q
    ||||| ||||||||| |  || || ||||||||||||||||||||||||||||| |||||||||| | ||||||| |||||||||||||||||||    
T  52298 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaat 52392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 52227 - 52267
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  52227 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 52267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 167785 - 167745
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  167785 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 167745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 66; Significance: 3e-29; HSPs: 4)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 135 - 232
Target Start/End: Original strand, 34512 - 34609
Alignment:
Q  135 gttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||| | ||| || ||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||| |||||||||    
T  34512 gttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaatacgaaatc 34609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 13503 - 13581
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||||||||| |||||||||||||| |||||||||| | ||||||| ||||||||||||||||||| ||||||||    
T  13503 tctttcctaatcataattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacgaaatc 13581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 13407 - 13447
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  13407 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 13447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 96
Target Start/End: Original strand, 34437 - 34473
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttc 96  Q
    |||||||||||| |||||| |||||||||||||||||    
T  34437 tcgcgaggcgagagcctctgctcgccatggcgagttc 34473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 129 - 232
Target Start/End: Complemental strand, 2820 - 2717
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||| ||||||||| |  || || ||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||| ||||    
T  2820 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaatcacga 2721  T
Q  229 aatc 232  Q
    ||||    
T  2720 aatc 2717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 129 - 232
Target Start/End: Original strand, 20498 - 20601
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||| ||||||||||| ||| || ||||||||||||||||||||||||||||| |||||||||| | ||||||| |||||||| |||||||||| ||||    
T  20498 ttccaggttcaatcttattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcagaagtcaaaatcacga 20597  T
Q  229 aatc 232  Q
    ||||    
T  20598 aatc 20601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 63; Significance: 2e-27; HSPs: 3)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 8157 - 7926
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaac--tagtcaattcgcgaggcgagggcctctactcgccatggcgagttcag 98  Q
    |||||| ||||||||||||||||||||| |||||| |||||||||||||||  ||||    |||||||||||| |||||| ||||||||||||||||| |    
T  8157 tcaactcgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaacactagtgc--tcgcgaggcgagagcctctgctcgccatggcgagttctg 8060  T
Q  99 gtgtaactctcaaaacttg--ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacc 196  Q
     |  |  |||| ||| ||   |||| || |  ||||| ||||||||| |  || || ||||||||||||| ||||||||||||||| |||||||||  |     
T  8059 ttagat-tctccaaagtttcattct-aagtctttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaaggca 7962  T
Q  197 tctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||||||||| || |||||    
T  7961 tctaaggttcaactcaaaagtcaaaatcacaaaatc 7926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 98
Target Start/End: Complemental strand, 53352 - 53314
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcag 98  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  53352 tcgcgaggcgagggcctctactcgctatggcgagttcag 53314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 232
Target Start/End: Complemental strand, 53200 - 53103
Alignment:
Q  135 gttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||| |||||  || ||| |||||||||||||| || |||||| |||||||||| | ||||| |||||||| ||  ||||||| ||| |||||    
T  53200 gttcaatctcaatctaaaaacttgcctaatcattattatacttgttcaggcactcaaaatcatctaaagttcaacttaagggtcaaaaatacaaaatc 53103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 2 - 222
Target Start/End: Original strand, 9335 - 9555
Alignment:
Q  2 caacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtg 101  Q
    ||||| ||||||||| ||||||||||| ||||   |||||||||||||| | |  |  |||||||||||| ||||||||||||||||||||||||||||     
T  9335 caactcgtgcgacaaggatcgcatttaacctagc-aaggcattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatggcgagttcaggtt 9433  T
Q  102 taactctcaaaactt-gttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctcta 200  Q
     |  || ||||| ||  |||| || |  ||||| || |||||| | ||| || |||||||||||| ||||||||| |||||| |||||||||| | ||||    
T  9434 cagttcacaaaaattcattctaaactctttccaggtccaatctcactctacattctttcctaatcgttattagacttgttcaggcactcaaaagcatcta 9533  T
Q  201 aggttcaactcaaaagtcaaaa 222  Q
    ||| ||| ||||||||||||||    
T  9534 agggtcatctcaaaagtcaaaa 9555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 13896 - 13973
Alignment:
Q  155 ctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||| |||||||||    
T  13896 ctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaatacgaaatc 13973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 151 - 232
Target Start/End: Complemental strand, 675 - 594
Alignment:
Q  151 caatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||||||||||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||||||| ||||||||    
T  675 caatctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacgaaatc 594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 232
Target Start/End: Complemental strand, 8229 - 8124
Alignment:
Q  127 tattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattac 226  Q
    ||||||||||||||||| | |||  || ||| |||||||||||||  ||||||||| || |||| |||| || |||||| |||||| || ||||||| ||    
T  8229 tattccaagttcaatctcattctaaaaccttgcctaatcattattgtacatgttcaggccctcataaacatccaaggttaaactcacaactcaaaatcac 8130  T
Q  227 gaaatc 232  Q
    ||||||    
T  8129 gaaatc 8124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 135 - 232
Target Start/End: Complemental strand, 29009 - 28912
Alignment:
Q  135 gttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||| | ||| || ||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| |||||||||||||||| |||||    
T  29009 gttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaacccaaaagtcaaaattacaaaatc 28912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 7938 - 7841
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcagg 99  Q
    |||||| ||||||||||||||||||||| |||||  |||||||| ||||||| | ||| |||||||||||| |||| ||||||| ||||||||||||||    
T  7938 tcaactcgtgcgacaaagatcgcatttaccctaac-aaggcattttgtaactgggcaactcgcgaggcgagagcctttactcgctatggcgagttcagg 7841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 60 - 232
Target Start/End: Complemental strand, 16405 - 16231
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaacttgttctt---aaattattccaagttcaatcttaatctccaatct 156  Q
    |||||||||||| |||||| ||||||||||||||||||||| ||  | || |||| | |  ||   ||||  ||||| ||||||||| | |||  | |||    
T  16405 tcgcgaggcgagagcctctgctcgccatggcgagttcaggt-tagatttccaaacgtttcattcgaaaatctttccaggttcaatctcattctaaattct 16307  T
Q  157 ttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||||||| ||||||||    
T  16306 ttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacgaaatc 16231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 135 - 232
Target Start/End: Complemental strand, 2174 - 2077
Alignment:
Q  135 gttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||| | ||| || ||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||| |||||||||||| |||||    
T  2174 gttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaacagtcaaaattacaaaatc 2077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 2249 - 2213
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttc 96  Q
    |||||||||||| |||||| |||||||||||||||||    
T  2249 tcgcgaggcgagagcctctgctcgccatggcgagttc 2213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 62; Significance: 7e-27; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 60 - 232
Target Start/End: Complemental strand, 32764 - 32591
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatcttt 158  Q
    |||||||||| | |||||| |||||  |||||||||  |||| ||||| ||||| ||  |||| ||||  || || ||||||||| | |||||| || ||    
T  32764 tcgcgaggcgggagcctctcctcgctgtggcgagttagggtgcaactcacaaaaattcattctaaaatctttacaggttcaatctcattctccagtcctt 32665  T
Q  159 cctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||||||  ||||||||| | |||||||||| |||||||||||||||| ||||||||    
T  32664 cctaatcattattagacatgttcagacactcaaaagcatctaaggttcgactcaaaagtcaaaatcacgaaatc 32591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 60 - 232
Target Start/End: Original strand, 46241 - 46414
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatcttt 158  Q
    |||||||||| | |||||| |||||  |||||||||  |||| ||||| ||||| ||  |||| ||||  || || ||||||||| | |||||| || ||    
T  46241 tcgcgaggcgggagcctctcctcgctgtggcgagttagggtgcaactcacaaaaattcattctaaaatctttacaggttcaatctcattctccagtcctt 46340  T
Q  159 cctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||||||  ||||||||| | |||||||||| |||||||||||||||| ||||||||    
T  46341 cctaatcattattagacatgttcagacactcaaaagcatctaaggttcgactcaaaagtcaaaatcacgaaatc 46414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 154 - 223
Target Start/End: Original strand, 16498 - 16566
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaat 223  Q
    ||||||||||||||||||||||||||||| |||||||||| || |||||| |||||||||||||||||||    
T  16498 tctttcctaatcattattagacatgttcaggcactcaaaagcc-ctaaggatcaactcaaaagtcaaaat 16566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 28 - 232
Target Start/End: Complemental strand, 20261 - 20058
Alignment:
Q  28 atcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaacttg-ttcttaaat 126  Q
    |||||||| ||||| |||||||| ||| ||| | |||||||||| ||||||||||||||||||||||||||||     ||  |||| ||  ||||||| |    
T  20261 atcctaaacaaggc-ttctgtaattaggcaacttgcgaggcgagagcctctactcgccatggcgagttcaggtcagcttccaaaaagttcattcttaa-t 20164  T
Q  127 tattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattac 226  Q
    || |||| ||||||||| | ||| || ||||||||| ||||||||| ||||||||| | |||||||| | ||||||| ||||||||||||||||| | ||    
T  20163 taatccaggttcaatctcattctacattctttcctactcattattaaacatgttcaggaactcaaaagcatctaaggatcaactcaaaagtcaaattcac 20064  T
Q  227 gaaatc 232  Q
    ||||||    
T  20063 gaaatc 20058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 232
Target Start/End: Complemental strand, 65479 - 65426
Alignment:
Q  179 ttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||| |||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  65479 ttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaactacaaaatc 65426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 223
Target Start/End: Complemental strand, 1932 - 1719
Alignment:
Q  8 gtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactc 107  Q
    |||||||||||||||||   |||||||| ||| |||||||||||| |   | |||||||||||| |||||| ||||||||||||| |||||||   | |     
T  1932 gtgcgacaaagatcgcaaa-atcctaaacaag-cattctgtaactgggtcactcgcgaggcgagagcctctgctcgccatggcgaattcaggtcagattt 1835  T
Q  108 tcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttc 206  Q
     ||||  ||  |||| ||||  ||||| ||||||||| | ||| || ||||||||||||||||||||||||||||| |||||| ||||| ||||||| ||    
T  1834 ccaaagtttcattctaaaatctttccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactc-aaaacatctaaggatc 1736  T
Q  207 aactcaaaagtcaaaat 223  Q
    |||||||||||||||||    
T  1735 aactcaaaagtcaaaat 1719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 128 - 232
Target Start/End: Complemental strand, 4878 - 4774
Alignment:
Q  128 attccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacg 227  Q
    |||||| ||||||||| |  || || ||||||||||||||||||||||||||||| |||||||||  | |||||||||||||||||||||||||| ||||    
T  4878 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaggcatctaaggttcaactcaaaagtcaaaaatacg 4779  T
Q  228 aaatc 232  Q
    |||||    
T  4778 aaatc 4774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 128 - 232
Target Start/End: Complemental strand, 799 - 695
Alignment:
Q  128 attccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacg 227  Q
    |||||| ||||||||| |  || || |||||||||||||||||||||||| |||| |||||||||| | |||||||||||||||||||||||||| ||||    
T  799 attccaggttcaatctcatcctacattctttcctaatcattattagacatattcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaatacg 700  T
Q  228 aaatc 232  Q
    |||||    
T  699 aaatc 695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 858 - 818
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  858 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 43 - 246
Target Start/End: Original strand, 12228 - 12431
Alignment:
Q  43 ttctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaacttg-ttcttaaattattccaagttcaat 141  Q
    |||||||| | | ||| |||||||| ||| ||||||||||||||||||||||||||||     ||  |||| ||  ||||||| ||| |||| |||||||    
T  12228 ttctgtaattgggcaactcgcgaggtgagagcctctactcgccatggcgagttcaggtcagtttccaaaaagttcattcttaa-ttaatccaggttcaat 12326  T
Q  142 cttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatccggatagct 241  Q
    || | ||| || ||||||||||||||||||| |||| ||||  ||||||||| | ||||||| |||| |||||||||||||| |||||||  ||||||||    
T  12327 ctcattctacattctttcctaatcattattaaacatattcagacactcaaaagcatctaaggatcaattcaaaagtcaaaatcacgaaatttggatagct 12426  T
Q  242 ctctg 246  Q
    |||||    
T  12427 ctctg 12431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 128 - 232
Target Start/End: Complemental strand, 10173 - 10069
Alignment:
Q  128 attccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacg 227  Q
    |||||| ||||||||| |  || || ||||||||||||||||||||||||||||| |||||||||| | |||||||||||| ||||||||||||| ||||    
T  10173 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaattcaaaagtcaaaaatacg 10074  T
Q  228 aaatc 232  Q
    |||||    
T  10073 aaatc 10069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 128 - 232
Target Start/End: Original strand, 5222 - 5326
Alignment:
Q  128 attccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacg 227  Q
    |||||| ||||||||| |  || || |||||||||||||||||||||||| |||| |||||||||| | ||||||||||||||||||||||||||||||     
T  5222 attccaggttcaatctcatcctacattctttcctaatcattattagacatcttcatgcactcaaaagcatctaaggttcaactcaaaagtcaaaattaca 5321  T
Q  228 aaatc 232  Q
    |||||    
T  5322 aaatc 5326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 5163 - 5203
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    ||||||||| || ||||||||||||| ||||||||||||||    
T  5163 tcgcgaggcaagagcctctactcgccgtggcgagttcaggt 5203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 154 - 246
Target Start/End: Original strand, 23293 - 23385
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    ||||||||||||||||||||||||||||| |||||||||  | ||||||| |||||||||||||||||||||||||||  |||||||| ||||    
T  23293 tctttcctaatcattattagacatgttcaggcactcaaaggcatctaaggatcaactcaaaagtcaaaattacgaaatttggatagctatctg 23385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 129 - 232
Target Start/End: Original strand, 290 - 393
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||| ||||||||| |  || || ||||||||||||||||||||||||||||| |||||||||||| | ||||| ||||||||||||||||||| ||||    
T  290 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaaacatataaggatcaactcaaaagtcaaaatcacga 389  T
Q  229 aatc 232  Q
    ||||    
T  390 aatc 393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 129 - 232
Target Start/End: Original strand, 20789 - 20892
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||| ||||||||| |  || || ||||||||||||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||||||| ||||    
T  20789 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacga 20888  T
Q  229 aatc 232  Q
    ||||    
T  20889 aatc 20892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 20718 - 20758
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  20718 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 20758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 60; Significance: 1e-25; HSPs: 7)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 129 - 232
Target Start/End: Original strand, 4894 - 4997
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||| ||||||||| | ||| || ||||| ||||||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||||||| ||||    
T  4894 ttccaggttcaatctcattctacattcttttctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacga 4993  T
Q  229 aatc 232  Q
    ||||    
T  4994 aatc 4997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 129 - 232
Target Start/End: Original strand, 12476 - 12579
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||| ||||||||| | ||| || ||||| ||||||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||||||| ||||    
T  12476 ttccaggttcaatctcattctacattcttttctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacga 12575  T
Q  229 aatc 232  Q
    ||||    
T  12576 aatc 12579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 129 - 232
Target Start/End: Original strand, 22428 - 22531
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||| ||||||||| | ||| || ||||| ||||||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||||||| ||||    
T  22428 ttccaggttcaatctcattctacattcttttctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacga 22527  T
Q  229 aatc 232  Q
    ||||    
T  22528 aatc 22531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 18324 - 18286
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  18324 gcactcaaaaacatctaaggttcaactcaaaagtcaaaa 18286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 4823 - 4863
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| ||||| |||||| |||||||||||||||||||||    
T  4823 tcgcgaagcgagagcctctgctcgccatggcgagttcaggt 4863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 12405 - 12445
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| ||||| |||||| |||||||||||||||||||||    
T  12405 tcgcgaagcgagagcctctgctcgccatggcgagttcaggt 12445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 22357 - 22397
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||| ||||| |||||| |||||||||||||||||||||    
T  22357 tcgcgaagcgagagcctctgctcgccatggcgagttcaggt 22397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 129 - 232
Target Start/End: Original strand, 39145 - 39248
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||| ||||||||| | ||| || ||||||||||||||||||||||||||||| |||||||||| | ||||||| ||||||  ||||||||||||||||    
T  39145 ttccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaacttcaaagtcaaaattacga 39244  T
Q  229 aatc 232  Q
    ||||    
T  39245 aatc 39248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 39076 - 39116
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  39076 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 39116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 60; Significance: 1e-25; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 129 - 232
Target Start/End: Original strand, 40242 - 40345
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||| ||||||||| |  ||||| ||||||||||||||||||||||||||||| |||||||||| | |||| || ||||||||||||||||||| ||||    
T  40242 ttccaggttcaatctcatcctccattctttcctaatcattattagacatgttcaggcactcaaaagcatctacggatcaactcaaaagtcaaaatcacga 40341  T
Q  229 aatc 232  Q
    ||||    
T  40342 aatc 40345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 129 - 232
Target Start/End: Complemental strand, 39666 - 39563
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||| ||||||||| | ||| || |||||||||||||||| |||||||||||| | |||||||| | ||||||| ||||||||||||||||||| | ||    
T  39666 ttccaggttcaatctcattctacattctttcctaatcattaatagacatgttcaggtactcaaaagcatctaaggatcaactcaaaagtcaaaatcatga 39567  T
Q  229 aatc 232  Q
    ||||    
T  39566 aatc 39563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 188
Target Start/End: Complemental strand, 59232 - 59179
Alignment:
Q  135 gttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcact 188  Q
    ||||||||| | ||| || ||| ||||||||||||||||||||||||| |||||    
T  59232 gttcaatctcattctacattctgtcctaatcattattagacatgttcaggcact 59179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 59307 - 59271
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttc 96  Q
    |||||||||||| |||||| |||||||||||||||||    
T  59307 tcgcgaggcgagagcctctgctcgccatggcgagttc 59271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 60; Significance: 1e-25; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 129 - 232
Target Start/End: Original strand, 2237 - 2340
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||| ||||||||| |  || || ||||||||||||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||||||| ||||    
T  2237 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacga 2336  T
Q  229 aatc 232  Q
    ||||    
T  2337 aatc 2340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 222
Target Start/End: Complemental strand, 207381 - 207161
Alignment:
Q  2 caacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaa--ctagtcaattcgcgaggcgagggcctctactcgccatggcgagttcagg 99  Q
    ||||| ||||||||||||||||||||| |||||| || ||||| |||||  |||||    |||||||||||| |||||| |||||||||||||||||||     
T  207381 caactcgtgcgacaaagatcgcatttaacctaaacaaagcattgtgtaatactagtgc--tcgcgaggcgagagcctctgctcgccatggcgagttcag- 207285  T
Q  100 tgtaactctcaaaacttg--ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacct 197  Q
    |   | |||| ||| ||   |||| || |  ||||| ||||||||| |  || || ||| ||||||||| ||||||||||||||| |||||||||  | |    
T  207284 tcagattctccaaagtttcattct-aagtctttccaggttcaatctcatcctacattctctcctaatcaatattagacatgttcaggcactcaaaggcat 207186  T
Q  198 ctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||||||||||||||||||    
T  207185 ctaaggttcaactcaaaagtcaaaa 207161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 100
Target Start/End: Original strand, 2170 - 2206
Alignment:
Q  64 gaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||  ||||||||||||||||||||||||||||    
T  2170 gaggcgatagcctctactcgccatggcgagttcaggt 2206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 16679 - 16757
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||||||||||| |||||||||| | |||||||||||||| ||||||||||| |||||||||    
T  16679 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaacttaaaagtcaaaagtacgaaatc 16757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 32464 - 32542
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||| ||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||| |||||||||    
T  32464 tctttcctagtcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaatacgaaatc 32542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 21301 - 21379
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||| |||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||| |||||    
T  21301 tctttcataatcattattagacatgttcaggcactaaaaaacatctaaggttcaactcaaaagtcaaaattacaaaatc 21379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 135 - 232
Target Start/End: Original strand, 734 - 831
Alignment:
Q  135 gttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||| | ||| || ||||| ||||||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||||||| ||||||||    
T  734 gttcaatctcattctacattcttttctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacgaaatc 831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 60 - 232
Target Start/End: Original strand, 3785 - 3959
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaacttg--ttcttaaattattccaagttcaatcttaatctccaatctt 157  Q
    |||||||||||| |||||| |||||| ||||||||||||||   | || || || ||   ||||  ||| |||||| ||||||||| |  || || ||||    
T  3785 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttgattctacaatcattccaggttcaatctcatcctacattctt 3884  T
Q  158 tcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||||||||||||||||||||  ||||||||| | ||||| | ||||||||||||||||||| ||||||||    
T  3885 tcctaatcattattagacatgttcagacactcaaaagcatctaaagatcaactcaaaagtcaaaatcacgaaatc 3959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 232
Target Start/End: Original strand, 288 - 516
Alignment:
Q  3 aacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaa--ctagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||| ||||||||||||||||||||| |||||| ||||||||||||||  |||||    |||||||||||| |||||| ||||||||||||||||||| |    
T  288 aactcgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaatactagtgc--tcgcgaggcgagagcctctgctcgccatggcgagttcag-t 384  T
Q  101 gtaactctcaaaacttg--ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctc 198  Q
       | |||| ||| ||   |||| || |  ||||| ||||||||| |  || || ||||||||||||| ||||||||||||||| |||||| ||  | ||    
T  385 cagattctccaaagttccattct-aagtatttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactc-aaggcatc 482  T
Q  199 taaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||||| |||||||||||||| ||||||||    
T  483 taaggttcaattcaaaagtcaaaatcacgaaatc 516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 57; Significance: 7e-24; HSPs: 4)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 124 - 232
Target Start/End: Complemental strand, 79102 - 78994
Alignment:
Q  124 aattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaat 223  Q
    ||||| |||| ||||||||| | ||| || || |||||||||||||||| ||||||||| |||||||||| | ||||||||||||||||||||||| |||    
T  79102 aattaatccaggttcaatctcattctacattccttcctaatcattattaaacatgttcatgcactcaaaagcatctaaggttcaactcaaaagtcagaat 79003  T
Q  224 tacgaaatc 232  Q
    ||| |||||    
T  79002 tacaaaatc 78994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 129 - 222
Target Start/End: Complemental strand, 16950 - 16857
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    ||||| ||||||||| | ||| || ||||||||||||||||||||||||||||| |||||||||| | ||||||| ||||||| ||||||||||    
T  16950 ttccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcgaaagtcaaaa 16857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 231
Target Start/End: Complemental strand, 13758 - 13711
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaat 231  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  13758 gcactcaaaaacctctaaggttcaactcaaaagtcaaaaatacaaaat 13711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 79184 - 79107
Alignment:
Q  8 gtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccat 87  Q
    |||||||||||||||||   |||||||| ||||| |||||||| | | ||| |||||||||||| |||||||||||||||    
T  79184 gtgcgacaaagatcgcaaa-atcctaaacaaggc-ttctgtaattgggcaactcgcgaggcgagagcctctactcgccat 79107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 56; Significance: 3e-23; HSPs: 3)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 15960 - 15866
Alignment:
Q  2 caacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttca 97  Q
    |||||||||||||||||||||||   |||||||| |||||||||||||||| | ||| ||||||||||||||||| ||||||| ||||||||||||    
T  15960 caacttgtgcgacaaagatcgcaaa-atcctaaacaaggcattctgtaactgggcaactcgcgaggcgagggcctatactcgctatggcgagttca 15866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 13390 - 13482
Alignment:
Q  2 caacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagtt 95  Q
    ||||| |||||||||||||||||   |||||||| |||||||||||||||||| ||| ||  ||||||||||||| ||||||| ||||||||||    
T  13390 caactcgtgcgacaaagatcgcaaa-atcctaaacaaggcattctgtaactaggcaactcatgaggcgagggcctatactcgctatggcgagtt 13482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 3158 - 3233
Alignment:
Q  131 ccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttc 206  Q
    ||||||||||||| |||||  || ||| |||||||||||||  |||| |||| |||||||||| | ||||||||||    
T  3158 ccaagttcaatctcaatctaaaaacttgcctaatcattattgtacatattcaggcactcaaaatcatctaaggttc 3233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 17718 - 17640
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||||||||||| |||||||||| | ||||||||| ||||||||||||||||| | ||||||    
T  17718 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggtttaactcaaaagtcaaaatcatgaaatc 17640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 10555 - 10633
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||||||||||| |||||||||| | ||||||| |||||||||| |||||||| ||||||||    
T  10555 tctttcctaatcattattagacatgttcatgcactcaaaagcatctaaggatcaactcaaaggtcaaaatcacgaaatc 10633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 151 - 232
Target Start/End: Complemental strand, 5834 - 5753
Alignment:
Q  151 caatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||||||||||||||||||||||||||| |||||||||| | ||||||| ||||||||||||| ||||  ||||||||    
T  5834 caatctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtaaaaaacacgaaatc 5753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 54; Significance: 4e-22; HSPs: 4)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 135 - 232
Target Start/End: Original strand, 16050 - 16147
Alignment:
Q  135 gttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||| | ||| || |||||||||||||||||||||||| |||| |||||||||| | ||||||| ||||||| |||||||||||||| |||||    
T  16050 gttcaatctcattctacattctttcctaatcattattagacatattcaggcactcaaaagcatctaaggatcaactctaaagtcaaaattacaaaatc 16147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 232
Target Start/End: Original strand, 1755 - 1826
Alignment:
Q  161 taatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||| ||| || |||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  1755 taatctttaataaacatcttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaattacgaaatc 1826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 15927 - 16011
Alignment:
Q  11 cgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttc 96  Q
    ||||||||||||||||   |||||| |||||||||||||||     |  |||||||||||| |||||| |||||||||||||||||    
T  15927 cgacaaagatcgcattccacctaaa-aaggcattctgtaacacaaaagctcgcgaggcgagagcctctgctcgccatggcgagttc 16011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 17992 - 17920
Alignment:
Q  138 caatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaact 210  Q
    |||||| |||||  || ||| |||||||||||||| |||| |||| ||||||||||   ||||||||||||||    
T  17992 caatctcaatctaaaaacttgcctaatcattattatacatattcatgcactcaaaattatctaaggttcaact 17920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 135 - 232
Target Start/End: Original strand, 28928 - 29025
Alignment:
Q  135 gttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||| | ||| || ||||||||||||||||||||||||||||| | |||||||| | ||||||| || |||||||||||||||| ||||||||    
T  28928 gttcaatctcattctacattctttcctaatcattattagacatgttcaggaactcaaaagcatctaaggatctactcaaaagtcaaaatcacgaaatc 29025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 53; Significance: 2e-21; HSPs: 3)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 154 - 222
Target Start/End: Complemental strand, 25775 - 25707
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    ||||||||||||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||||||    
T  25775 tctttcctaatcattattagacatgttcaggcactcaaaaccatctaaggatcaactcaaaagtcaaaa 25707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 61 - 232
Target Start/End: Complemental strand, 33299 - 33126
Alignment:
Q  61 cgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaacttg--ttcttaaattattccaagttcaatcttaatctccaatcttt 158  Q
    ||||||||||| |||| | |||||| ||||||||||||||   |||  ||||| ||   |||| ||||  ||||| ||||||||| |  || || |||||    
T  33299 cgcgaggcgagagcctttgctcgccgtggcgagttcaggtaagacttccaaaagtttcattctaaaatctttccaggttcaatctcatcctacattcttt 33200  T
Q  159 cctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||| || ||||||| || | ||||||| ||||||||||||| ||||| ||||||||    
T  33199 cctaatcattattagacatgtccaggcactcagaagcatctaaggatcaactcaaaagtgaaaatcacgaaatc 33126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 25870 - 25830
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  25870 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 25830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 232
Target Start/End: Complemental strand, 24010 - 23934
Alignment:
Q  156 tttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||||||||| ||||||||||   ||||||| ||||||||||||||||||| ||||||||    
T  24010 tttcctaatcattattagacatgttcaggcactcaaaagaatctaaggatcaactcaaaagtcaaaatcacgaaatc 23934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 34591 - 34553
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||||| |||||||||||||||| |||||||||    
T  34591 gcactcaaaaacatctaaggttcaactcacaagtcaaaa 34553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 129 - 232
Target Start/End: Complemental strand, 18693 - 18590
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||| ||||||||| |  || || ||||||||||||||||||||||||||||| |||||||||| | ||||||| ||| ||||||||||||||| || |    
T  18693 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcatctcaaaagtcaaaatcacaa 18594  T
Q  229 aatc 232  Q
    ||||    
T  18593 aatc 18590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 129 - 232
Target Start/End: Complemental strand, 12544 - 12441
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||| ||||||||| |  || || ||||||||||||| ||||||||||||||| |||||||||  | ||||||||||| ||||||||||||||| ||||    
T  12544 ttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaaggcatctaaggttcatctcaaaagtcaaaatcacga 12445  T
Q  229 aatc 232  Q
    ||||    
T  12444 aatc 12441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 98
Target Start/End: Complemental strand, 12611 - 12575
Alignment:
Q  62 gcgaggcgagggcctctactcgccatggcgagttcag 98  Q
    |||||||||| |||||| |||||||||||||||||||    
T  12611 gcgaggcgagagcctctgctcgccatggcgagttcag 12575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 129 - 232
Target Start/End: Complemental strand, 8267 - 8165
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    ||||| ||||||||| |  || || ||||||||||||||||||||||||||||| |||||||||| | || |||| ||||||||||||||||||| ||||    
T  8267 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatc-aaggatcaactcaaaagtcaaaatcacga 8169  T
Q  229 aatc 232  Q
    ||||    
T  8168 aatc 8165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 166 - 232
Target Start/End: Complemental strand, 10970 - 10904
Alignment:
Q  166 attattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||| |||||||||| | |||||||||||||||||||||||||| |||||||||    
T  10970 attattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaatacgaaatc 10904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 11260 - 11170
Alignment:
Q  128 attccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtc 218  Q
    |||||| ||||||||| |  || || ||||||||||||||||||||||||||||| ||||||||||   ||||||||||||||||||||||    
T  11260 attccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagaatctaaggttcaactcaaaagtc 11170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 14034 - 14106
Alignment:
Q  138 caatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaact 210  Q
    |||||| |||||  || ||| |||||||||||||| |||| |||| |||||||||| | ||||||||||||||    
T  14034 caatctcaatctaaaaacttacctaatcattattatacatattcaggcactcaaaatcatctaaggttcaact 14106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 13611 - 13689
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||||||||||||||||||| |||| |||||||||| | | ||||| ||||||||||||||||||| ||||||||    
T  13611 tctttcctaatcattattagacattttcaggcactcaaaagcatataaggatcaactcaaaagtcaaaatcacgaaatc 13689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 13526 - 13566
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  13526 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 13566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 15214 - 15108
Alignment:
Q  126 ttattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaatta 225  Q
    |||||||| ||||||||| |  || || |||||||||||||||||||||||| || | |||||||||| | |||| ||||||||| ||||||||||| ||    
T  15214 ttattccaggttcaatctcatcctacattctttcctaatcattattagacatattaaggcactcaaaagcatctacggttcaacttaaaagtcaaaaata 15115  T
Q  226 cgaaatc 232  Q
    |||||||    
T  15114 cgaaatc 15108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 32968 - 32908
Alignment:
Q  172 agacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||| ||| |||||| | |||||||||||||||||||||||||| |||||||||    
T  32968 agacatgttcaggcattcaaaagcatctaaggttcaactcaaaagtcaaaaatacgaaatc 32908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 60 - 228
Target Start/End: Complemental strand, 15420 - 15251
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatcttt 158  Q
    |||||||||||| |||||| ||||| |||||||||||||||   | || ||||  ||  |||| ||||   ||||  |||||||| | ||| || |||||    
T  15420 tcgcgaggcgagagcctctgctcgctatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccagattcaatctcattctacattcttt 15321  T
Q  159 cctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacga 228  Q
    |||||||||||||| |||| |||| |||||||||| | ||||||| ||||||||||||||||||| ||||    
T  15320 cctaatcattattaaacatattcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacga 15251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 232
Target Start/End: Original strand, 10169 - 10399
Alignment:
Q  2 caacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtg 101  Q
    ||||| || |||||||||||||||||| |||||| |||||||||||||||        |||||||||||| |||||| ||||||||||||||||||| |     
T  10169 caactcgtacgacaaagatcgcatttaacctaaacaaggcattctgtaacacaagtgctcgcgaggcgagagcctctgctcgccatggcgagttcag-tc 10267  T
Q  102 taactctcaaaacttg--ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctct 199  Q
      | |||| ||| ||   |||| || |  ||||| ||||||||| |  || || ||||||||||||| || |||||||||| | |||||||||  | |||    
T  10268 agattctccaaagtttccttct-aagtctttccaggttcaatctcatcctacattctttcctaatcaataatagacatgtttaggcactcaaaggcatct 10366  T
Q  200 aaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||||||||||||||||||| || |||||    
T  10367 aaggttcaactcaaaagtcaaaatcacaaaatc 10399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 232
Target Start/End: Original strand, 2326 - 2430
Alignment:
Q  128 attccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacg 227  Q
    |||||| ||||||||| |  || || || |||||||| ||||||||||| ||||| |||||||||  | |||||||||||||||||||||||||| ||||    
T  2326 attccaggttcaatctcatcctacattccttcctaattattattagacacgttcaggcactcaaaggcatctaaggttcaactcaaaagtcaaaaatacg 2425  T
Q  228 aaatc 232  Q
    |||||    
T  2426 aaatc 2430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 2267 - 2307
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  2267 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 2307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 232
Target Start/End: Original strand, 47360 - 47464
Alignment:
Q  128 attccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacg 227  Q
    |||||| ||||||||| |  || || || ||||||||||||||||||||| ||||  ||||||||| | |||||||||||||||||||||||| | ||||    
T  47360 attccaggttcaatctcatcctacattcattcctaatcattattagacatattcagacactcaaaagcatctaaggttcaactcaaaagtcaacaatacg 47459  T
Q  228 aaatc 232  Q
    |||||    
T  47460 aaatc 47464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 64344 - 64306
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||| | ||||||||||||||||||||||||||    
T  64344 gcactcaaaagcatctaaggttcaactcaaaagtcaaaa 64306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 48; Significance: 2e-18; HSPs: 3)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 232
Target Start/End: Original strand, 40325 - 40400
Alignment:
Q  157 ttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||| || ||||||||| |||||||||| | ||||||| ||||||||||||||||||| ||||||||    
T  40325 ttcctaatcattaataaacatgttcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacgaaatc 40400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 40228 - 40268
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  40228 tcgcgaggcgagagcctctactcgccgtggcgagttcaggt 40268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 19739 - 19649
Alignment:
Q  8 gtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcagg 99  Q
    ||||||||||| || |||||| |||||  ||||  |||||||||| | ||| || ||||||||| |||||||||| | ||||||||||||||    
T  19739 gtgcgacaaaggtcacatttaacctaac-aaggtgttctgtaactgggcaactcacgaggcgagagcctctactccctatggcgagttcagg 19649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 48; Significance: 2e-18; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 14559 - 14500
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaatt 60  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||    
T  14559 tcaacttgtgcgaccaagatcgcatttatcctaaacaaggcattctgtaactggtcaatt 14500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 231
Target Start/End: Complemental strand, 30426 - 30379
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaat 231  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||    
T  30426 gcactcaaaagcatctaaggttcaactcaaaagtcaaaattacgaaat 30379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 222
Target Start/End: Original strand, 2292 - 2328
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    ||||||| || ||||||||||||||||||||||||||    
T  2292 actcaaagacatctaaggttcaactcaaaagtcaaaa 2328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 8886 - 8964
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||| |||||||||| |||| |||||||||| | ||||||| ||||||||||||||||||| || |||||    
T  8886 tctttcctaatcactattagacatattcaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacaaaatc 8964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 100
Target Start/End: Original strand, 8788 - 8830
Alignment:
Q  58 attcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||||| ||||||||| ||| ||||||||||||||    
T  8788 attcgcgaggcgagagcctctactggccgtggcgagttcaggt 8830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 222
Target Start/End: Original strand, 1288 - 1382
Alignment:
Q  128 attccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||| ||||||||| |  || || ||||||||||||||||||||  ||||||| |||||||||  | ||||||||||||||||||||||||||    
T  1288 attccaggttcaatctcatcctacattctttcctaatcattattagtaatgttcaggcactcaaaggcatctaaggttcaactcaaaagtcaaaa 1382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 47; Significance: 6e-18; HSPs: 6)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 222
Target Start/End: Original strand, 3855 - 3949
Alignment:
Q  128 attccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||| ||||||||| |  || || |||||||||||||||| ||| |||||||| |||||||||  | ||||||||||||||||||||||||||    
T  3855 attccaggttcaatctcatcctacattctttcctaatcattactagtcatgttcaggcactcaaagtcatctaaggttcaactcaaaagtcaaaa 3949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 222
Target Start/End: Original strand, 7919 - 8013
Alignment:
Q  128 attccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||| ||||||||| |  || || |||||||||||||||| ||| |||||||| |||||||||  | ||||||||||||||||||||||||||    
T  7919 attccaggttcaatctcatcctacattctttcctaatcattactagtcatgttcaggcactcaaagtcatctaaggttcaactcaaaagtcaaaa 8013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 98
Target Start/End: Complemental strand, 27523 - 27485
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcag 98  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  27523 tcgcgaggcgagggcctctactcgctatggcgagttcag 27485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 210
Target Start/End: Complemental strand, 27388 - 27296
Alignment:
Q  118 ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaact 210  Q
    |||||||| | | ||| ||||||||| || ||  || ||| |||||||||||||| ||||||||| |||||||||| | ||||| ||||||||    
T  27388 ttcttaaaatttcccaggttcaatctcaaactaaaaacttgcctaatcattattatacatgttcaggcactcaaaatcatctaaagttcaact 27296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 3796 - 3836
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    ||||||| |||| |||||| |||||||||||||||||||||    
T  3796 tcgcgagacgagagcctctgctcgccatggcgagttcaggt 3836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 7860 - 7900
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    ||||||| |||| |||||| |||||||||||||||||||||    
T  7860 tcgcgagacgagagcctctgctcgccatggcgagttcaggt 7900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 135 - 232
Target Start/End: Complemental strand, 6557 - 6460
Alignment:
Q  135 gttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||| | ||| || ||||||||||||||||||||||||||||| ||||| |||  | ||||||| ||| ||||||||||||||| | ||||||    
T  6557 gttcaatctcattctacattctttcctaatcattattagacatgttcaggcactaaaaggcatctaaggatcatctcaaaagtcaaaatcatgaaatc 6460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 179 - 232
Target Start/End: Original strand, 26834 - 26887
Alignment:
Q  179 ttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  26834 ttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaattacgaaatc 26887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 179 - 232
Target Start/End: Complemental strand, 36077 - 36024
Alignment:
Q  179 ttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  36077 ttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaattacgaaatc 36024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 232
Target Start/End: Complemental strand, 9696 - 9466
Alignment:
Q  2 caacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaa--ctagtcaattcgcgaggcgagggcctctactcgccatggcgagttcagg 99  Q
    ||||| |||||||||||||| |||||| |||||| ||||||||||||||  |||||    |||||||||||| |||||| ||||||||| |||||||||     
T  9696 caactcgtgcgacaaagatcacatttaacctaaacaaggcattctgtaatactagtgc--tcgcgaggcgagagcctctgctcgccatgacgagttcag- 9600  T
Q  100 tgtaactctcaaaacttg--ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacct 197  Q
    |   | |||| ||| ||   |||| || |  |||||  |||||||| |  || || |||||| |||||| ||||||||||||||| |||||||||  | |    
T  9599 tcagattctccaaagtttcattct-aagtctttccagattcaatctcatcctacattctttcgtaatcaatattagacatgttcaggcactcaaaggcat 9501  T
Q  198 ctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||||| |||| | ||||||    
T  9500 ctaaggttcaactcaaaagtcgaaatcatgaaatc 9466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 179 - 232
Target Start/End: Original strand, 36891 - 36944
Alignment:
Q  179 ttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  36891 ttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaattacgaaatc 36944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 135 - 232
Target Start/End: Original strand, 4915 - 5012
Alignment:
Q  135 gttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||| | ||| ||||||| |||| |||||| |||||||||| | |||||||||| | ||||||||||||||||||||| ||| | ||||||||    
T  4915 gttcaatctcattctacaatcttccctagtcattaatagacatgtttaggcactcaaaagcatctaaggttcaactcaaaagttaaagtcacgaaatc 5012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 232
Target Start/End: Complemental strand, 80194 - 79964
Alignment:
Q  2 caacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaa--ctagtcaattcgcgaggcgagggcctctactcgccatggcgagttcagg 99  Q
    ||||| ||||||| ||||||||||||| |||||| ||||||||||||||  ||| |    |||||||||||| |||||| ||||||||| |||||||||     
T  80194 caactcgtgcgacgaagatcgcatttaacctaaacaaggcattctgtaatactattgc--tcgcgaggcgagagcctctgctcgccatgtcgagttcag- 80098  T
Q  100 tgtaactctcaaaacttg--ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacct 197  Q
    |   | |||| ||| ||   |||| || |  ||||| ||||||||| |  || || ||||||||||||| ||||||||||||||| ||||||||   | |    
T  80097 tcagattctccaaagtttcattct-aagtctttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaatggcat 79999  T
Q  198 ctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
     ||| ||||||||||||||||||||| ||||||||    
T  79998 ttaatgttcaactcaaaagtcaaaatcacgaaatc 79964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 60 - 232
Target Start/End: Complemental strand, 339756 - 339583
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaacttg-ttcttaaattattccaagttcaatcttaatctccaatcttt 158  Q
    |||||||||||| |||||| |||||| ||||||||||| ||   | || ||||| ||  ||||  |||  ||||| ||||||||| |  || || || ||    
T  339756 tcgcgaggcgagagcctctgctcgccgtggcgagttcatgtcagattcccaaaagttcattctacaatctttccaggttcaatctcatcctacattcatt 339657  T
Q  159 cctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||||||||  |||| |||||||||| | | ||||| ||||||||||||||||||| ||||||||    
T  339656 cctaatcattattagacaaattcaggcactcaaaagcatttaaggatcaactcaaaagtcaaaatcacgaaatc 339583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 71729 - 71775
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||| || ||||||||||||||||||||||||||| ||||||||    
T  71729 actcaaagacatctaaggttcaactcaaaagtcaaaatcacgaaatc 71775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 136 - 232
Target Start/End: Complemental strand, 741 - 645
Alignment:
Q  136 ttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||| | ||| || ||||||||||||||||||||||||||||| |||||||||| | | ||||| ||||||| || |||||||| || |||||    
T  741 ttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatataaggatcaactcgaaggtcaaaatcacaaaatc 645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 232
Target Start/End: Original strand, 6984 - 7088
Alignment:
Q  128 attccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacg 227  Q
    |||||| ||||||||| |  || || || |||||||| ||||||||||| ||||| |||||||||  | |||||||||||||||||||||||||| || |    
T  6984 attccaggttcaatctcatcctacattccttcctaataattattagacacgttcaggcactcaaaggcatctaaggttcaactcaaaagtcaaaaatatg 7083  T
Q  228 aaatc 232  Q
    |||||    
T  7084 aaatc 7088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 6925 - 6965
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  6925 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 6965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 118 - 193
Target Start/End: Original strand, 227867 - 227942
Alignment:
Q  118 ttcttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaa 193  Q
    |||||||| ||||||| ||||||||| |||||  ||||||||||||||||||||| ||||||| | ||||||||||    
T  227867 ttcttaaactattccaggttcaatctcaatctagaatctttcctaatcattattatacatgtttaggcactcaaaa 227942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 225667 - 225769
Alignment:
Q  2 caacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtg 101  Q
    ||||| |||||||||||||||||   |||||||| ||| |||||||||||||   || ||||||||| |||||||||||| |  ||||||| ||||||||    
T  225667 caactcgtgcgacaaagatcgcaaa-atcctaaacaag-cattctgtaactatgtaactcgcgaggcaagggcctctacttgttatggcgatttcaggtg 225764  T
Q  102 taact 106  Q
    |||||    
T  225765 taact 225769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 10569 - 10647
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||||||| || ||| |||||| | |||||||||| | ||||||| ||||||||||||||||||| ||||||||    
T  10569 tctttcctaatcactactaggcatgttaaggcactcaaaagcatctaaggatcaactcaaaagtcaaaatcacgaaatc 10647  T

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Target: scaffold0032 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 51979 - 52057
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||||||||||||||||| |||||| |||||||||  | || |||||| ||||||||||| |||| |||||||||    
T  51979 tctttcctaatcattattagacttgttcaggcactcaaaggcatcaaaggtttaactcaaaagtaaaaaatacgaaatc 52057  T

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Target: scaffold0124 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 222
Target Start/End: Complemental strand, 24361 - 24293
Alignment:
Q  154 tctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    ||||||||||||| ||||||||||||||| ||||||||   | ||||||||| ||||||||||||||||    
T  24361 tctttcctaatcaatattagacatgttcaggcactcaagggcatctaaggttaaactcaaaagtcaaaa 24293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 98
Target Start/End: Complemental strand, 24455 - 24417
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcag 98  Q
    |||||||||||| |||||| |||||||||||||||||||    
T  24455 tcgcgaggcgagagcctctgctcgccatggcgagttcag 24417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1257 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold1257
Description:

Target: scaffold1257; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 2080 - 2030
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaac 51  Q
    |||||| ||||||||||||||||||||| |||||| |||||||||||||||    
T  2080 tcaactcgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaac 2030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 134 - 232
Target Start/End: Original strand, 2244 - 2342
Alignment:
Q  134 agttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||||| | ||| ||||||||||||||||||| |   ||| |||| |||||||||||| |||||||||| ||| |||||| | |||| |||||||    
T  2244 agttcaatctcattctacaatctttcctaatcattagtgtgcatcttcaggcactcaaaaacatctaaggttccactaaaaagttataattccgaaatc 2342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 12379 - 12445
Alignment:
Q  127 tattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaa 193  Q
    ||||||| ||||||||| |||||  ||||||||||||||||||||| |||||||||  |||||||||    
T  12379 tattccaggttcaatctcaatctaaaatctttcctaatcattattatacatgttcagacactcaaaa 12445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1895 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1895
Description:

Target: scaffold1895; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 952 - 891
Alignment:
Q  161 taatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    ||||| ||| ||| ||| |||| |||||||||||| ||||||||||||||||||||||||||    
T  952 taatctttaataggcatcttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaa 891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 1307 - 1372
Alignment:
Q  160 ctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaatta 225  Q
    |||||| ||| ||||||| || | |||||||||| | |||||||||||||||||||||||||||||    
T  1307 ctaatctttaatagacatcttaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaatta 1372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 10525 - 10464
Alignment:
Q  161 taatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    ||||| ||| ||| ||| |||| |||||||||||| ||||||||||||||||||||||||||    
T  10525 taatctttaataggcatcttcaagcactcaaaaacatctaaggttcaactcaaaagtcaaaa 10464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 15383 - 15322
Alignment:
Q  161 taatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    ||||| ||| ||||||| || | |||||||||||| ||||||||||||||||||||| ||||    
T  15383 taatctttaatagacatctttaagcactcaaaaacatctaaggttcaactcaaaagtaaaaa 15322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 70211 - 70272
Alignment:
Q  161 taatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    ||||| ||| || |||| |||| |||||||||||| ||||||||||||||||||||||||||    
T  70211 taatctttaatatacatcttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaa 70272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 37; Significance: 0.000000000006; HSPs: 3)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 232
Target Start/End: Original strand, 20421 - 20469
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  20421 gcactcaaaaacatctaaggttcaactcaaaagtcaaaactacaaaatc 20469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 206
Target Start/End: Original strand, 38765 - 38836
Alignment:
Q  135 gttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttc 206  Q
    ||||||||| |||||  || ||| |||||||||||||| |||| |||||||||||| || | ||||||||||    
T  38765 gttcaatctcaatctaaaaacttgcctaatcattattatacatattcacgcactcagaatcatctaaggttc 38836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 97
Target Start/End: Original strand, 38635 - 38672
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttca 97  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  38635 tcgcgaggcgagagcctctactcgctatggcgagttca 38672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 37; Significance: 0.000000000006; HSPs: 3)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 232
Target Start/End: Original strand, 1692 - 1764
Alignment:
Q  160 ctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||| ||||||||||||||| |||| ||||| | ||||| |||||| | ||||||||||| |||||||||    
T  1692 ctaatcaatattagacatgttcaggcacgcaaaagcatctaacgttcaatttaaaagtcaaaaatacgaaatc 1764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 232
Target Start/End: Original strand, 7669 - 7741
Alignment:
Q  160 ctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||| ||||||||||||||| |||| ||||| | ||||| |||||| | ||||||||||| |||||||||    
T  7669 ctaatcaatattagacatgttcaggcacgcaaaagcatctaacgttcaatttaaaagtcaaaaatacgaaatc 7741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 232
Target Start/End: Original strand, 16083 - 16136
Alignment:
Q  179 ttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||| |||||||||| | |||| ||||||| ||||||||||||| |||||||||    
T  16083 ttcaggcactcaaaagcatctatggttcaattcaaaagtcaaaaatacgaaatc 16136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1419 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1419
Description:

Target: scaffold1419; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 95
Target Start/End: Original strand, 339 - 374
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagtt 95  Q
    ||||||||||||||||||||||||||||||||||||    
T  339 tcgcgaggcgagggcctctactcgccatggcgagtt 374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 222
Target Start/End: Complemental strand, 21492 - 21449
Alignment:
Q  179 ttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||| |||||||||||| ||||||||||||||||||||||||||    
T  21492 ttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaa 21449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 222
Target Start/End: Complemental strand, 29384 - 29341
Alignment:
Q  179 ttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||| |||||||||||| ||||||||||||||||||||||||||    
T  29384 ttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaa 29341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 231
Target Start/End: Original strand, 44488 - 44535
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaat 231  Q
    |||||||||| | |||||||||||||||||||||||||||||| ||||    
T  44488 gcactcaaaagcatctaaggttcaactcaaaagtcaaaattacaaaat 44535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 18678 - 18721
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaattacg 227  Q
    |||||||||||| |||||||||||||||||||||||||| ||||    
T  18678 gcactcaaaaacatctaaggttcaactcaaaagtcaaaaatacg 18721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 206
Target Start/End: Complemental strand, 103312 - 103241
Alignment:
Q  135 gttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttc 206  Q
    ||||||||| |||||  || ||| |||||||||||||| ||||||||| ||||||| || ||||||||||||    
T  103312 gttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactcagaatcctctaaggttc 103241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 103500 - 103403
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcagg 99  Q
    |||||| || |||||||| || |||||| |||||  ||||  |||||||| | | ||| ||| |||||||| |||||||||||| ||||||||||||||    
T  103500 tcaactcgtacgacaaaggtcacatttaacctaac-aaggtgttctgtaaatggacaactcgtgaggcgagagcctctactcgctatggcgagttcagg 103403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 226
Target Start/End: Original strand, 1928 - 1970
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaattac 226  Q
    |||||||||| | ||||||||||||||||||||||||||||||    
T  1928 gcactcaaaagcatctaaggttcaactcaaaagtcaaaattac 1970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 17402 - 17356
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||| | |||||||||||||||||||||||||||||| |||||    
T  17402 actcaaaagcatctaaggttcaactcaaaagtcaaaattacaaaatc 17356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 222
Target Start/End: Original strand, 680 - 742
Alignment:
Q  160 ctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||| |||||| |||| || | |||||||||| | ||||||||||||||||||||||||||    
T  680 ctaatctttattaaacatcttaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaa 742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 222
Target Start/End: Original strand, 15839 - 15877
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  15839 gcactcaaaaacatctaaggttcaactcaaaagtcaaaa 15877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 6759 - 6721
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  6759 gcactcaaaaacatctaaggttcaactcaaaagtcaaaa 6721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1220 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 2217 - 2262
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaat 231  Q
    |||||||| | |||||||||||||||||||||| ||||||||||||    
T  2217 actcaaaagcatctaaggttcaactcaaaagtccaaattacgaaat 2262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 6543 - 6588
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaat 231  Q
    |||||||||| |||||||||||||||||||||||||| ||| ||||    
T  6543 actcaaaaacatctaaggttcaactcaaaagtcaaaaatacaaaat 6588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 747 - 792
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaat 231  Q
    |||||||| | |||||||||||||||||||||| ||||||||||||    
T  747 actcaaaagcatctaaggttcaactcaaaagtccaaattacgaaat 792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 225
Target Start/End: Complemental strand, 18134 - 18093
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaatta 225  Q
    |||||||||||| ||||||||||||||| |||||||||||||    
T  18134 gcactcaaaaacatctaaggttcaactctaaagtcaaaatta 18093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 35200 - 35155
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaat 231  Q
    |||||||| | |||||||||||||||||||||||||||||| ||||    
T  35200 actcaaaagcatctaaggttcaactcaaaagtcaaaattacaaaat 35155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 45534 - 45579
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaat 231  Q
    |||||||| | |||||||||||||||||||||| ||||||||||||    
T  45534 actcaaaagcatctaaggttcaactcaaaagtccaaattacgaaat 45579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 210
Target Start/End: Complemental strand, 24263 - 24174
Alignment:
Q  121 ttaaattattccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaact 210  Q
    ||||| ||||||| ||||||||| |||||  || ||| |||||||||||||| | || |||| |||||||||| | |||||| |||||||    
T  24263 ttaaactattccaggttcaatctcaatctaaaagcttgcctaatcattattatatatattcaggcactcaaaatcatctaagcttcaact 24174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 226
Target Start/End: Original strand, 830 - 870
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaattac 226  Q
    |||||||| | ||||||||||||||||||||||||||||||    
T  830 actcaaaagcatctaaggttcaactcaaaagtcaaaattac 870  T

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Target: scaffold1048 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1048
Description:

Target: scaffold1048; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 1853 - 1897
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaa 230  Q
    |||||||||| |||||||||||||||||||||| ||| |||||||    
T  1853 actcaaaaacatctaaggttcaactcaaaagtccaaaatacgaaa 1897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 25568 - 25632
Alignment:
Q  129 ttccaagttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaa 193  Q
    ||||||||||||||| |||||  || ||| |||||||||||||| |||| |||| ||||||||||    
T  25568 ttccaagttcaatctcaatctaaaaacttgcctaatcattattatacattttcaggcactcaaaa 25632  T

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Target: scaffold0615 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 231
Target Start/End: Complemental strand, 1765 - 1718
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaat 231  Q
    |||||||||| | |||||||||||||||||| ||||||||||| ||||    
T  1765 gcactcaaaagcatctaaggttcaactcaaaggtcaaaattacaaaat 1718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 223
Target Start/End: Complemental strand, 18983 - 18944
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaat 223  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  18983 gcactcaaaagcatctaaggttcaactcaaaagtcaaaat 18944  T

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Target: scaffold0215 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 222
Target Start/End: Original strand, 27256 - 27299
Alignment:
Q  179 ttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||| |||||||||||| ||||||||||||||||||||| ||||    
T  27256 ttcaggcactcaaaaacatctaaggttcaactcaaaagtaaaaa 27299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 206
Target Start/End: Original strand, 80730 - 80801
Alignment:
Q  135 gttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttc 206  Q
    ||||||||| |||||  || ||| |||||||||||||| ||||||||| |||||||||| | ||||| ||||    
T  80730 gttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactcaaaatcatctaaagttc 80801  T

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Target: scaffold0022; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 99
Target Start/End: Complemental strand, 128774 - 128735
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcagg 99  Q
    |||||||||||| |||||||||||| ||||||||||||||    
T  128774 tcgcgaggcgagagcctctactcgctatggcgagttcagg 128735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2044 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold2044
Description:

Target: scaffold2044; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 1134 - 1088
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||| | ||||||| ||||||||||||||||||| ||||||||    
T  1134 actcaaaagcatctaaggatcaactcaaaagtcaaaatcacgaaatc 1088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1403 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1403
Description:

Target: scaffold1403; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 94
Target Start/End: Original strand, 866 - 900
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagt 94  Q
    |||||||| ||||||||||||||||||||||||||    
T  866 tcgcgaggtgagggcctctactcgccatggcgagt 900  T

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Target: scaffold0676 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 226
Target Start/End: Original strand, 4865 - 4907
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaattac 226  Q
    |||||||||| | | ||||||||||||||||||||||||||||    
T  4865 gcactcaaaagcatttaaggttcaactcaaaagtcaaaattac 4907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 31; Significance: 0.00000002; HSPs: 5)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Original strand, 6020 - 6058
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||| | ||||||||||||||||||||||||||    
T  6020 gcactcaaaagcatctaaggttcaactcaaaagtcaaaa 6058  T

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Target: scaffold0476; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Original strand, 7215 - 7253
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||| | ||||||||||||||||||||||||||    
T  7215 gcactcaaaagcatctaaggttcaactcaaaagtcaaaa 7253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 13025 - 13075
Alignment:
Q  1 tcaacttgtgcgacaaagatcgcatttatcctaaagaaggcattctgtaac 51  Q
    |||||| ||||||||||||| ||||||| |||||| |||||||| ||||||    
T  13025 tcaactcgtgcgacaaagattgcatttaacctaaacaaggcattttgtaac 13075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 232
Target Start/End: Original strand, 8194 - 8290
Alignment:
Q  135 gttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||| |||||  || ||| |||||||||||| | ||||||||| ||||| | ||||  |||| ||||||||  || |||||||||||||||||    
T  8194 gttcaatctcaatctaaaaacttgcctaatcattatcatacatgttcaggcacttagaaacaactaaagttcaact-taaggtcaaaattacgaaatc 8290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 232
Target Start/End: Original strand, 13235 - 13331
Alignment:
Q  135 gttcaatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    ||||||||| |||||  || ||| |||||||||||| | ||||||||| ||||||| ||||  |||| ||||||||  || ||||||||||| |||||    
T  13235 gttcaatctcaatctaaaaacttgcctaatcattatcatacatgttcaggcactcataaacaactaaagttcaact-taaggtcaaaattacaaaatc 13331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 6097 - 6059
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||| | ||||||||||||||||||||||||||    
T  6097 gcactcaaaagcatctaaggttcaactcaaaagtcaaaa 6059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Original strand, 3277 - 3315
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||| | ||||||||||||||||||||||||||    
T  3277 gcactcaaaagcatctaaggttcaactcaaaagtcaaaa 3315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Original strand, 6943 - 6981
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||| | ||||||||||||||||||||||||||    
T  6943 gcactcaaaagcatctaaggttcaactcaaaagtcaaaa 6981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 16030 - 15992
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||||| ||||||||||||||||||||| ||||    
T  16030 gcactcaaaaacatctaaggttcaactcaaaagtaaaaa 15992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Original strand, 15109 - 15147
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||||| ||||||||||||||||||||| ||||    
T  15109 gcactcaaaaacatctaaggttcaactcaaaagtaaaaa 15147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 46408 - 46370
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||| | ||||||||||||||||||||||||||    
T  46408 gcactcaaaagcatctaaggttcaactcaaaagtcaaaa 46370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Original strand, 13196 - 13234
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||| | ||||||||||||||||||||||||||    
T  13196 gcactcaaaagcatctaaggttcaactcaaaagtcaaaa 13234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 31; Significance: 0.00000002; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 190962 - 190924
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||||| ||||||||| ||||||||||||||||    
T  190962 gcactcaaaaacatctaaggttgaactcaaaagtcaaaa 190924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 192665 - 192627
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||||||| ||||||||| ||||||||||||||||    
T  192665 gcactcaaaaacatctaaggttgaactcaaaagtcaaaa 192627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 15003 - 14959
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaa 230  Q
    |||||||| | |||||||||||||||||||||| ||| |||||||    
T  15003 actcaaaagcatctaaggttcaactcaaaagtccaaaatacgaaa 14959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1992 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1992
Description:

Target: scaffold1992; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 246 - 295
Alignment:
Q  197 tctaaggttcaactcaaaagtcaaaattacgaaatccggatagctctctg 246  Q
    ||||||| |||||||||||||| |||| |||||||  |||||||||||||    
T  246 tctaaggatcaactcaaaagtctaaatcacgaaatttggatagctctctg 295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 2125 - 2080
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaat 231  Q
    |||||||| | ||||||||||||| |||||||||||||||| ||||    
T  2125 actcaaaagcatctaaggttcaacgcaaaagtcaaaattacaaaat 2080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 9985 - 9940
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaat 231  Q
    |||||||| | ||||||||||||| |||||||||||||||| ||||    
T  9985 actcaaaagcatctaaggttcaacgcaaaagtcaaaattacaaaat 9940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 6960 - 6915
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaat 231  Q
    |||||||| | ||||||||||||||| |||||||||||||| ||||    
T  6960 actcaaaagcatctaaggttcaactcgaaagtcaaaattacaaaat 6915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 30; Significance: 0.00000009; HSPs: 3)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 97
Target Start/End: Complemental strand, 11974 - 11937
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttca 97  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  11974 tcgcgaggcgagcgcctctactcgctatggcgagttca 11937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 97
Target Start/End: Complemental strand, 15126 - 15089
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttca 97  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  15126 tcgcgaggcgagcgcctctactcgctatggcgagttca 15089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 97
Target Start/End: Complemental strand, 16374 - 16337
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttca 97  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  16374 tcgcgaggcgagcgcctctactcgctatggcgagttca 16337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 8661 - 8600
Alignment:
Q  161 taatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    ||||| ||| ||| ||| |||| | |||||||||| |||||||||||||||||| |||||||    
T  8661 taatctttaataggcatcttcagggactcaaaaacatctaaggttcaactcaaaggtcaaaa 8600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 30; Significance: 0.00000009; HSPs: 3)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 97
Target Start/End: Original strand, 24529 - 24566
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttca 97  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  24529 tcgcgaggcgagcgcctctactcgctatggcgagttca 24566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 97
Target Start/End: Original strand, 35399 - 35436
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttca 97  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  35399 tcgcgaggcgagcgcctctactcgctatggcgagttca 35436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 29156 - 29228
Alignment:
Q  138 caatcttaatctccaatctttcctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaact 210  Q
    |||||| |||||  || ||| |||||||||||||| | || |||| |||||||||| | ||||||||||||||    
T  29156 caatctcaatctaaaaacttgcctaatcattattatatatattcaggcactcaaaatcatctaaggttcaact 29228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 97
Target Start/End: Original strand, 209240 - 209277
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttca 97  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  209240 tcgcgaggcgagcgcctctactcgctatggcgagttca 209277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 192006 - 191962
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaa 230  Q
    |||| ||||| |||||||||||||||||||||| ||| |||||||    
T  192006 actcgaaaacatctaaggttcaactcaaaagtccaaaatacgaaa 191962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 97
Target Start/End: Original strand, 97322 - 97359
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttca 97  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  97322 tcgcgaggcgagagcctctactcgctatggcgagttca 97359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 97
Target Start/End: Original strand, 106600 - 106637
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttca 97  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  106600 tcgcgaggcgagagcctctactcgctatggcgagttca 106637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1552 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1552
Description:

Target: scaffold1552; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 222
Target Start/End: Original strand, 769 - 805
Alignment:
Q  186 actcaaaaacctctaaggttcaactcaaaagtcaaaa 222  Q
    |||||||| | ||||||||||||||||||||||||||    
T  769 actcaaaagcatctaaggttcaactcaaaagtcaaaa 805  T

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Target: scaffold1351 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1351
Description:

Target: scaffold1351; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 99
Target Start/End: Original strand, 326 - 362
Alignment:
Q  63 cgaggcgagggcctctactcgccatggcgagttcagg 99  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  326 cgaggcgagagcctctactcgctatggcgagttcagg 362  T

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Target: scaffold0761 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 5995 - 5951
Alignment:
Q  179 ttcacgcactcaaaaacctctaaggttcaactcaaaagtcaaaat 223  Q
    |||| |||||||||||| |||||||||||||||| | ||||||||    
T  5995 ttcaggcactcaaaaacatctaaggttcaactcacaggtcaaaat 5951  T

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Target: scaffold0737 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 99
Target Start/End: Complemental strand, 1598 - 1562
Alignment:
Q  63 cgaggcgagggcctctactcgccatggcgagttcagg 99  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  1598 cgaggcgagagcctctactcgctatggcgagttcagg 1562  T

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Target: scaffold0273 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 232
Target Start/End: Complemental strand, 9118 - 9070
Alignment:
Q  184 gcactcaaaaacctctaaggttcaactcaaaagtcaaaattacgaaatc 232  Q
    |||||||||||| |||||||||||||| ||| ||||||  |||||||||    
T  9118 gcactcaaaaacatctaaggttcaacttaaaggtcaaatctacgaaatc 9070  T

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Target: scaffold0141 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 39792 - 39832
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  39792 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 39832  T

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Target: scaffold0111 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 32849 - 32901
Alignment:
Q  161 taatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaa 213  Q
    ||||| ||| ||| ||| |||| |||||||||||| |||||||||||||||||    
T  32849 taatctttaataggcatcttcaggcactcaaaaacatctaaggttcaactcaa 32901  T

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Target: scaffold0104 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 2240 - 2300
Alignment:
Q  160 ctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaa 220  Q
    |||||| |||||| |||| || | ||||| |||| | ||||||||||||||||||||||||    
T  2240 ctaatctttattaaacatcttaaggcacttaaaagcatctaaggttcaactcaaaagtcaa 2300  T

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Target: scaffold0104; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 9922 - 9982
Alignment:
Q  160 ctaatcattattagacatgttcacgcactcaaaaacctctaaggttcaactcaaaagtcaa 220  Q
    |||||| |||||| |||| || | ||||| |||| | ||||||||||||||||||||||||    
T  9922 ctaatctttattaaacatcttaaggcacttaaaagcatctaaggttcaactcaaaagtcaa 9982  T

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Target: scaffold0049 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 75020 - 74980
Alignment:
Q  60 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 100  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  75020 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 74980  T

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