View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0755_high_58 (Length: 253)

Name: NF0755_high_58
Description: NF0755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0755_high_58
NF0755_high_58
[»] chr3 (21 HSPs)
chr3 (1-246)||(14865731-14865976)
chr3 (1-246)||(17131617-17131862)
chr3 (1-241)||(12033375-12033614)
chr3 (1-240)||(19235002-19235237)
chr3 (116-241)||(23370435-23370560)
chr3 (99-246)||(51301572-51301720)
chr3 (39-228)||(13302185-13302372)
chr3 (110-176)||(13323782-13323848)
chr3 (97-228)||(13312841-13312970)
chr3 (112-181)||(10389433-10389502)
chr3 (112-181)||(10414522-10414591)
chr3 (112-181)||(10421192-10421261)
chr3 (119-176)||(24933823-24933880)
chr3 (116-170)||(9534328-9534382)
chr3 (97-170)||(17240513-17240587)
chr3 (116-170)||(18929246-18929300)
chr3 (116-168)||(20247791-20247843)
chr3 (116-168)||(24192957-24193009)
chr3 (119-171)||(41455097-41455149)
chr3 (116-171)||(16801467-16801521)
chr3 (116-170)||(14762758-14762812)
[»] chr1 (10 HSPs)
chr1 (1-246)||(20851057-20851302)
chr1 (4-246)||(20857684-20857926)
chr1 (4-246)||(21706164-21706406)
chr1 (1-246)||(21710704-21710948)
chr1 (118-212)||(20044910-20045004)
chr1 (97-170)||(18712780-18712854)
chr1 (116-170)||(20437024-20437078)
chr1 (116-170)||(32651573-32651627)
chr1 (119-171)||(41112038-41112090)
chr1 (116-170)||(19663517-19663571)
[»] scaffold0053 (1 HSPs)
scaffold0053 (1-246)||(79414-79660)
[»] chr8 (8 HSPs)
chr8 (1-246)||(24320595-24320840)
chr8 (110-170)||(29643386-29643446)
chr8 (116-246)||(44477623-44477754)
chr8 (116-246)||(44492781-44492912)
chr8 (97-170)||(18614253-18614327)
chr8 (97-170)||(23482053-23482127)
chr8 (116-168)||(8727735-8727787)
chr8 (119-171)||(23866618-23866670)
[»] chr5 (21 HSPs)
chr5 (15-246)||(19236799-19237030)
chr5 (4-246)||(22461044-22461286)
chr5 (4-246)||(22467668-22467910)
chr5 (1-240)||(20772856-20773090)
chr5 (1-240)||(20781631-20781865)
chr5 (1-240)||(24929862-24930097)
chr5 (1-246)||(28895967-28896210)
chr5 (1-246)||(28924793-28925036)
chr5 (1-246)||(28909215-28909458)
chr5 (1-246)||(28945610-28945853)
chr5 (1-246)||(28889263-28889506)
chr5 (2-179)||(20820105-20820279)
chr5 (2-179)||(20827205-20827379)
chr5 (116-236)||(38144472-38144591)
chr5 (97-170)||(18407944-18408018)
chr5 (112-178)||(34830081-34830146)
chr5 (97-170)||(23111200-23111274)
chr5 (116-172)||(22438746-22438802)
chr5 (116-170)||(19512387-19512441)
chr5 (116-170)||(28370055-28370109)
chr5 (119-171)||(23528634-23528686)
[»] chr7 (26 HSPs)
chr7 (1-246)||(16090960-16091206)
chr7 (1-246)||(20906386-20906630)
chr7 (1-246)||(29181033-29181279)
chr7 (71-246)||(2971209-2971384)
chr7 (112-246)||(14319554-14319688)
chr7 (112-246)||(14230777-14230911)
chr7 (1-77)||(2966850-2966926)
chr7 (1-231)||(2465248-2465474)
chr7 (116-241)||(14567204-14567329)
chr7 (1-231)||(3857308-3857534)
chr7 (118-181)||(31155396-31155459)
chr7 (116-170)||(11382871-11382925)
chr7 (116-170)||(11389348-11389402)
chr7 (116-178)||(21230952-21231014)
chr7 (116-171)||(14422985-14423040)
chr7 (116-170)||(16009577-16009631)
chr7 (119-171)||(12590643-12590695)
chr7 (119-171)||(13007435-13007487)
chr7 (116-172)||(20311050-20311106)
chr7 (116-170)||(13679494-13679548)
chr7 (116-170)||(15168176-15168230)
chr7 (119-171)||(12709843-12709895)
chr7 (119-171)||(13122914-13122966)
chr7 (119-171)||(13743712-13743764)
chr7 (116-168)||(16677296-16677348)
chr7 (116-168)||(17651532-17651584)
[»] chr6 (26 HSPs)
chr6 (4-246)||(20007872-20008114)
chr6 (1-240)||(9099005-9099240)
chr6 (1-231)||(21364423-21364648)
chr6 (1-231)||(23968405-23968630)
chr6 (112-241)||(31252419-31252549)
chr6 (118-246)||(11288596-11288721)
chr6 (118-181)||(15458492-15458555)
chr6 (118-181)||(15465087-15465150)
chr6 (116-246)||(34639910-34640041)
chr6 (116-246)||(34646584-34646715)
chr6 (143-246)||(28288437-28288537)
chr6 (116-178)||(10986173-10986235)
chr6 (153-246)||(24563475-24563569)
chr6 (116-171)||(29614146-29614201)
chr6 (116-170)||(4477858-4477912)
chr6 (116-170)||(23839199-23839253)
chr6 (116-178)||(24512836-24512898)
chr6 (209-246)||(24641607-24641644)
chr6 (119-171)||(12168366-12168418)
chr6 (119-171)||(19287275-19287327)
chr6 (119-171)||(19785869-19785921)
chr6 (119-171)||(19878459-19878511)
chr6 (116-171)||(930095-930150)
chr6 (116-171)||(18800438-18800493)
chr6 (118-170)||(9187498-9187550)
chr6 (119-171)||(19884235-19884287)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-246)||(135324-135568)
[»] scaffold0072 (1 HSPs)
scaffold0072 (1-246)||(49894-50141)
[»] chr2 (14 HSPs)
chr2 (1-220)||(25180880-25181099)
chr2 (1-218)||(10462-10679)
chr2 (112-246)||(27207644-27207778)
chr2 (112-246)||(26885179-26885312)
chr2 (118-246)||(23168224-23168351)
chr2 (118-246)||(23579481-23579608)
chr2 (97-170)||(23265123-23265197)
chr2 (97-170)||(23280191-23280265)
chr2 (153-246)||(27366472-27366566)
chr2 (119-246)||(5705947-5706075)
chr2 (116-170)||(6483718-6483772)
chr2 (116-170)||(6487185-6487239)
chr2 (116-170)||(21908360-21908414)
chr2 (119-171)||(26583830-26583882)
[»] chr4 (7 HSPs)
chr4 (1-209)||(16146791-16147000)
chr4 (113-178)||(27906263-27906328)
chr4 (57-168)||(14486601-14486713)
chr4 (119-246)||(53483708-53483836)
chr4 (116-172)||(15408140-15408196)
chr4 (116-171)||(11848114-11848169)
chr4 (119-171)||(8045832-8045884)
[»] scaffold1318 (1 HSPs)
scaffold1318 (32-246)||(1837-2051)
[»] scaffold0131 (1 HSPs)
scaffold0131 (6-246)||(889-1126)
[»] scaffold0348 (1 HSPs)
scaffold0348 (1-176)||(9221-9396)
[»] scaffold0127 (1 HSPs)
scaffold0127 (99-241)||(10222-10364)
[»] scaffold0001 (1 HSPs)
scaffold0001 (112-246)||(492953-493086)
[»] scaffold0553 (2 HSPs)
scaffold0553 (116-241)||(10125-10250)
scaffold0553 (143-212)||(11042-11111)
[»] scaffold0544 (1 HSPs)
scaffold0544 (116-241)||(1455-1580)
[»] scaffold1469 (1 HSPs)
scaffold1469 (1-181)||(1242-1420)
[»] scaffold0384 (1 HSPs)
scaffold0384 (1-212)||(16023-16232)
[»] scaffold0720 (1 HSPs)
scaffold0720 (112-246)||(3327-3461)
[»] scaffold0609 (1 HSPs)
scaffold0609 (112-246)||(5781-5916)
[»] scaffold0029 (3 HSPs)
scaffold0029 (1-231)||(91144-91372)
scaffold0029 (1-231)||(96870-97098)
scaffold0029 (118-171)||(111885-111938)
[»] scaffold0183 (1 HSPs)
scaffold0183 (118-240)||(6-125)
[»] scaffold0249 (1 HSPs)
scaffold0249 (118-181)||(13884-13947)
[»] scaffold0261 (1 HSPs)
scaffold0261 (112-178)||(23562-23628)
[»] scaffold0026 (2 HSPs)
scaffold0026 (116-246)||(111686-111817)
scaffold0026 (116-171)||(11850-11905)
[»] scaffold0453 (1 HSPs)
scaffold0453 (112-175)||(10546-10609)
[»] scaffold0034 (1 HSPs)
scaffold0034 (112-178)||(73281-73347)
[»] scaffold2054 (1 HSPs)
scaffold2054 (118-171)||(717-770)
[»] scaffold0222 (1 HSPs)
scaffold0222 (97-170)||(16801-16875)
[»] scaffold0107 (1 HSPs)
scaffold0107 (116-178)||(40524-40586)
[»] scaffold0004 (1 HSPs)
scaffold0004 (97-170)||(116877-116951)
[»] scaffold0019 (1 HSPs)
scaffold0019 (116-172)||(135474-135530)
[»] scaffold0924 (1 HSPs)
scaffold0924 (116-171)||(750-805)
[»] scaffold0247 (1 HSPs)
scaffold0247 (116-171)||(11342-11397)
[»] scaffold0235 (1 HSPs)
scaffold0235 (117-228)||(22536-22646)
[»] scaffold0154 (1 HSPs)
scaffold0154 (116-171)||(30858-30913)
[»] scaffold0461 (1 HSPs)
scaffold0461 (97-170)||(8-82)
[»] scaffold0146 (1 HSPs)
scaffold0146 (97-170)||(13613-13687)
[»] scaffold0129 (1 HSPs)
scaffold0129 (119-246)||(45198-45326)
[»] scaffold0020 (1 HSPs)
scaffold0020 (97-170)||(101928-102002)
[»] scaffold0310 (1 HSPs)
scaffold0310 (116-172)||(17644-17700)
[»] scaffold0025 (1 HSPs)
scaffold0025 (116-168)||(14398-14450)
[»] scaffold0456 (2 HSPs)
scaffold0456 (116-171)||(932-987)
scaffold0456 (116-171)||(8077-8132)
[»] scaffold0090 (1 HSPs)
scaffold0090 (116-171)||(18170-18225)
[»] scaffold1461 (1 HSPs)
scaffold1461 (112-170)||(1485-1543)
[»] scaffold0317 (1 HSPs)
scaffold0317 (116-170)||(1387-1441)
[»] scaffold0124 (1 HSPs)
scaffold0124 (116-170)||(34276-34330)
[»] scaffold1773 (1 HSPs)
scaffold1773 (119-180)||(1181-1242)
[»] scaffold0796 (2 HSPs)
scaffold0796 (119-212)||(1691-1784)
scaffold0796 (119-212)||(5714-5807)
[»] scaffold0117 (2 HSPs)
scaffold0117 (118-171)||(1897-1950)
scaffold0117 (118-171)||(8574-8627)
[»] scaffold0099 (1 HSPs)
scaffold0099 (118-169)||(12967-13019)
[»] scaffold0058 (1 HSPs)
scaffold0058 (119-171)||(294-346)
[»] scaffold0006 (1 HSPs)
scaffold0006 (119-171)||(50182-50234)


Alignment Details
Target: chr3 (Bit Score: 194; Significance: 1e-105; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 14865731 - 14865976
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcgcctaaaga 100  Q
    |||||||||||||||| ||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||  ||| ||||    
T  14865731 aatcatactaatcatccaagtacaacattataaacctgcttcttacaccttttctttcaaaatcatcattaaccattattttcccaattttaccttaaga 14865830  T
Q  101 acagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaatc 200  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  14865831 acagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaatc 14865930  T
Q  201 agttcctaagttcttctctcttggtcttctctccttgcctttgctt 246  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  14865931 agttcctaagttcttctctcttggtcttctctccttgccttagctt 14865976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 17131617 - 17131862
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcgcctaaaga 100  Q
    ||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||| | |||||||||||  ||| ||||    
T  17131617 aatcatactaaacatcaaagtacaacattataaacctgatccttataccttttctttcaaaatcatccttaaccctaaatttcccaattttaccttaaga 17131716  T
Q  101 acagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaatc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||    
T  17131717 acagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatc 17131816  T
Q  201 agttcctaagttcttctctcttggtcttctctccttgcctttgctt 246  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  17131817 agttcctaagttcttctctcttggtcttctctccttgccttagctt 17131862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 12033614 - 12033375
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcgcctaaaga 100  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||| ||||    
T  12033614 aatcatactaaacatcaaagtacaacattataaacctgattcttataccttttctttcaaaatcatcattaacccttaatttcccaattttaccttaaga 12033515  T
Q  101 acagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaatc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||| ||||||    
T  12033514 acagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa-aagcacatcaaatc 12033416  T
Q  201 agttcctaagttcttctctcttggtcttctctccttgcctt 241  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  12033415 agttcctaagttcttctctcttggtcttctctccttacctt 12033375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 19235237 - 19235002
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcgcctaaaga 100  Q
    ||||||||||||||||||| |||||||||| |||||||||||||| || ||||||| || |||||||||||||||| | |||||||||||  ||| ||||    
T  19235237 aatcatactaatcatcaaa-tacaacattataaacctgattcttacacattttctt-cagaatcatcattaaccctaaatttcccaattttaccttaaga 19235140  T
Q  101 acagttcaattgattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaat 199  Q
    |||||| |||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||  ||  ||||||||    
T  19235139 acagttaaattgattaatttttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgcaaagataa--agtgcagcaaat 19235042  T
Q  200 cagttcctaagttcttctctcttggtcttctctccttgcct 240  Q
    || |||||||| |||||||||||||||||||| ||||||||    
T  19235041 caattcctaagctcttctctcttggtcttctc-ccttgcct 19235002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 116 - 241
Target Start/End: Complemental strand, 23370560 - 23370435
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaatcagttcctaagttctt 215  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||||||||||||||||||| | || |||  ||||||||||||| ||||||||||||||    
T  23370560 aattttcagaaattatagattatgattattgagagatagtcccacccttaccttagaattgtatagacaaaaagcacagcaaatccgttcctaagttctt 23370461  T
Q  216 ctctcttggtcttctctccttgcctt 241  Q
    ||||||||||||||||||||||||||    
T  23370460 ctctcttggtcttctctccttgcctt 23370435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 99 - 246
Target Start/End: Original strand, 51301572 - 51301720
Alignment:
Q  99 gaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaa--ttagcacagca 196  Q
    ||||| |||||||||||||||||||||||||| ||||||||| ||||| ||||||||| |||||||||||||||||||| ||| |||    | ||||||     
T  51301572 gaacaattcaattgattaattttcagaaattacatattatgattattggaagataatctcacccttaccttagaattgcgaagacaaagaaaacacagc- 51301670  T
Q  197 aatcagttcctaagttcttctctcttggtcttctctccttgcctttgctt 246  Q
    ||||  |||   ||||||||||||||||||||||||||||||||| ||||    
T  51301671 aatcgattctctagttcttctctcttggtcttctctccttgccttagctt 51301720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 39 - 228
Target Start/End: Complemental strand, 13302372 - 13302185
Alignment:
Q  39 attcttataccttttctttcaaaatcatcattaacccttattttcccaatttcgcctaaagaacagttcaattgattaattttcagaaattatatattat 138  Q
    ||||||| ||| || ||||| || ||||||| |||||| | || |||| |||  | | ||||||| | || ||||||||||||||||||||| |||||||    
T  13302372 attcttacaccattcctttcgaagtcatcatcaaccctaaattccccattttatcttcaagaacaatgcatttgattaattttcagaaattacatattat 13302273  T
Q  139 gactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaatcagttcctaagttcttctctcttggtctt 228  Q
    || ||||||||||||||| |||||||||||||||||||   ||  ||  | ||||||||||||||||||| |||| |||| |||| ||||    
T  13302272 gattattgaaagataatctcacccttaccttagaattg--tagaaaaaaaacacagcaaatcagttcctaggttcatctcccttgttctt 13302185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 13323848 - 13323782
Alignment:
Q  110 ttgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattg 176  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||    
T  13323848 ttgattaattttcagaaattacatattatgattattgaaagataatctcacccttaccttagaattg 13323782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 97 - 228
Target Start/End: Complemental strand, 13312970 - 13312841
Alignment:
Q  97 aagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagca 196  Q
    ||||||| | || |||||||||||||| |||||| ||||||||| ||||||||||||||| |||||||||||||||||||   ||  ||  | |||||||    
T  13312970 aagaacaatccatttgattaattttcaaaaattacatattatgattattgaaagataatctcacccttaccttagaattg--tagaaaaaaaacacagca 13312873  T
Q  197 aatcagttcctaagttcttctctcttggtctt 228  Q
    |||||||||||| |||| |||| |||| ||||    
T  13312872 aatcagttcctaggttcatctcccttgttctt 13312841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 112 - 181
Target Start/End: Complemental strand, 10389502 - 10389433
Alignment:
Q  112 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaag 181  Q
    ||||| ||||||||||||||| ||||| |  |||||||||||||||||||||||||||||||||||||||    
T  10389502 gattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttagaattgcaaag 10389433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 112 - 181
Target Start/End: Complemental strand, 10414591 - 10414522
Alignment:
Q  112 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaag 181  Q
    ||||| ||||||||||||||| ||||| |  |||||||||||||||||||||||||||||||||||||||    
T  10414591 gattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttagaattgcaaag 10414522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 112 - 181
Target Start/End: Complemental strand, 10421261 - 10421192
Alignment:
Q  112 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaag 181  Q
    ||||| ||||||||||||||| ||||| |  |||||||||||||||||||||||||||||||||||||||    
T  10421261 gattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttagaattgcaaag 10421192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 24933880 - 24933823
Alignment:
Q  119 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattg 176  Q
    |||||||||||||| ||||||| |||||| ||||| || |||||||||||||||||||    
T  24933880 tttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattg 24933823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 9534328 - 9534382
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 170  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  9534328 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 9534382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 170
Target Start/End: Complemental strand, 17240587 - 17240513
Alignment:
Q  97 aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 170  Q
    ||||||| ||||||| ||| |||||||||||||||| ||||| || |||||| ||||| || |||||||||||||    
T  17240587 aagaacaattcaattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 17240513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 18929246 - 18929300
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 170  Q
    |||||||||||||||||||| |||| |||||| ||||| || |||||||||||||    
T  18929246 aattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18929300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 20247843 - 20247791
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 168  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||    
T  20247843 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 20247791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 168
Target Start/End: Original strand, 24192957 - 24193009
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 168  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||    
T  24192957 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 24193009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 41455149 - 41455097
Alignment:
Q  119 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 171  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  41455149 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 41455097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 171
Target Start/End: Complemental strand, 16801521 - 16801467
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 171  Q
    |||||||||||||||||||| |||| |||||| ||||| || ||||||||||||||    
T  16801521 aattttcagaaattatatat-atgattattgagagatagtctcacccttaccttag 16801467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 14762812 - 14762758
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 170  Q
    ||||||||||||||||| ||||||| ||| || ||||| || |||||||||||||    
T  14762812 aattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 14762758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 190; Significance: 1e-103; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 20851302 - 20851057
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcgcctaaaga 100  Q
    ||||||||||| ||||||||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||| | |||||||||||  ||| ||||    
T  20851302 aatcatactaaacatcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaatttcccaattttaccttaaga 20851203  T
Q  101 acagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaatc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||    
T  20851202 acagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatc 20851103  T
Q  201 agttcctaagttcttctctcttggtcttctctccttgcctttgctt 246  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  20851102 agttcctaagttcttctctcttggtcttctctccttgccttagctt 20851057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 4 - 246
Target Start/End: Complemental strand, 20857926 - 20857684
Alignment:
Q  4 catactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcgcctaaagaaca 103  Q
    |||||||| ||||||||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||| | |||||||||||  ||| |||||||    
T  20857926 catactaaacatcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaatttcccaattttaccttaagaaca 20857827  T
Q  104 gttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaatcagt 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||    
T  20857826 gttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatcagt 20857727  T
Q  204 tcctaagttcttctctcttggtcttctctccttgcctttgctt 246  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  20857726 tcctaagttcttctctcttggtcttctctccttgccttagctt 20857684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 4 - 246
Target Start/End: Original strand, 21706164 - 21706406
Alignment:
Q  4 catactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcgcctaaagaaca 103  Q
    |||||||| ||||||||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||| | |||||||||||  ||| |||||||    
T  21706164 catactaaacatcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaatttcccaattttaccttaagaaca 21706263  T
Q  104 gttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaatcagt 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||    
T  21706264 gttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatcagt 21706363  T
Q  204 tcctaagttcttctctcttggtcttctctccttgcctttgctt 246  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  21706364 tcctaagttcttctctcttggtcttctctccttgccttagctt 21706406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 21710704 - 21710948
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcgcctaaaga 100  Q
    ||||||||||| |||||| ||| ||||||| ||||||||| ||||||| |||||||||||||||||| | |||||| | |||||||||||  ||| ||||    
T  21710704 aatcatactaaacatcaa-gtataacattataaacctgatccttatactttttctttcaaaatcatcttaaaccctaaatttcccaattttaccttaaga 21710802  T
Q  101 acagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaatc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||    
T  21710803 acagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatc 21710902  T
Q  201 agttcctaagttcttctctcttggtcttctctccttgcctttgctt 246  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  21710903 agttcctaagttcttctctcttggtcttctctccttgccttagctt 21710948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 212
Target Start/End: Complemental strand, 20045004 - 20044910
Alignment:
Q  118 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaatcagttcctaagtt 212  Q
    ||||||||| |||||||||| ||  |||||| ||||||||||||||||||||||||||| |     ||||| ||||||||||||| |||||||||    
T  20045004 ttttcagaatttatatattaagatcattgaaggataatcccacccttaccttagaattgtaggaagaattaacacagcaaatcagctcctaagtt 20044910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 170
Target Start/End: Original strand, 18712780 - 18712854
Alignment:
Q  97 aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 170  Q
    ||||||| ||||||| ||| ||||||||||||||||||| ||||| |||||| ||||| || ||||| |||||||    
T  18712780 aagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccatacctta 18712854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 20437078 - 20437024
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 170  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  20437078 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 20437024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 32651573 - 32651627
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 170  Q
    ||||||||||||||||||| ||||| |||||| ||||| || |||||||||||||    
T  32651573 aattttcagaaattatatactatgattattgagagatagtctcacccttacctta 32651627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 41112038 - 41112090
Alignment:
Q  119 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 171  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  41112038 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 41112090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 19663571 - 19663517
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 170  Q
    ||||||||||||||||||| ||||| ||| || ||||| || |||||||||||||    
T  19663571 aattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 19663517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 79660 - 79414
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcgcctaaaga 100  Q
    |||||||||||||||  || |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||| ||||    
T  79660 aatcatactaatcattcaaatacaacattataaacctgattcttacaccttttctttcaaaatcatcattaacccttattttcccaattttaccttaaga 79561  T
Q  101 acagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagc-aaat 199  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||    
T  79560 acagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaaat 79461  T
Q  200 cagttcctaagttcttctctcttggtcttctctccttgcctttgctt 246  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||    
T  79460 cagttcctaagttcttctctcttggtcttctctccttgccttagctt 79414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 186; Significance: 1e-101; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 24320840 - 24320595
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcgcctaaaga 100  Q
    ||||||||||| ||||||||||||||| || ||||||||| | |||||||||||||||||||||||| |||||||| | |||||||||||  ||| ||||    
T  24320840 aatcatactaaacatcaaagtacaacaatataaacctgatccctataccttttctttcaaaatcatccttaaccctaaatttcccaattttaccttaaga 24320741  T
Q  101 acagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaatc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||    
T  24320740 acagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatc 24320641  T
Q  201 agttcctaagttcttctctcttggtcttctctccttgcctttgctt 246  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  24320640 agttcctaagttcttctctcttggtcttctctccttgccttagctt 24320595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 110 - 170
Target Start/End: Complemental strand, 29643446 - 29643386
Alignment:
Q  110 ttgattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 170  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||    
T  29643446 ttgattaattttcagaaattacatattatgattattgaaagataatctcacccttacctta 29643386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 246
Target Start/End: Original strand, 44477623 - 44477754
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaa--ttagcacagcaaatcagttcctaagttc 213  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||||||||  ||| |||    | |||||| ||||  |||   |||||    
T  44477623 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtgaagacaaagaaaacacagc-aatcgattctctagttc 44477721  T
Q  214 ttctctcttggtcttctctccttgcctttgctt 246  Q
    |||||||||||||||||||||||||||| ||||    
T  44477722 ttctctcttggtcttctctccttgccttagctt 44477754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 246
Target Start/End: Original strand, 44492781 - 44492912
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaa--ttagcacagcaaatcagttcctaagttc 213  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||||||||  ||| |||    | |||||| ||||  |||   |||||    
T  44492781 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtgaagacaaagaaaacacagc-aatcgattctctagttc 44492879  T
Q  214 ttctctcttggtcttctctccttgcctttgctt 246  Q
    |||||||||||||||||||||||||||| ||||    
T  44492880 ttctctcttggtcttctctccttgccttagctt 44492912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 170
Target Start/End: Original strand, 18614253 - 18614327
Alignment:
Q  97 aagaacagttcaattg-attaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 170  Q
    ||||||| |||||||| || |||||||||||||||||||| |||| |||||| ||||| || |||||||||||||    
T  18614253 aagaacaattcaattggatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18614327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 170
Target Start/End: Complemental strand, 23482127 - 23482053
Alignment:
Q  97 aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 170  Q
    ||||||| ||||||| ||| ||||||||||||||||||| ||||| |||||| ||||| || |||||||||||||    
T  23482127 aagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23482053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 8727787 - 8727735
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 168  Q
    ||||||||||||||||| ||||||| ||||||  ||||||| |||||||||||    
T  8727787 aattttcagaaattatagattatgattattgagggataatctcacccttacct 8727735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 23866618 - 23866670
Alignment:
Q  119 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 171  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  23866618 tttcaggaattataaattatgattattgagagatagtctcacccttaccttag 23866670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 180; Significance: 3e-97; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 15 - 246
Target Start/End: Original strand, 19236799 - 19237030
Alignment:
Q  15 tcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcgcctaaagaacagttcaattgat 114  Q
    ||||||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||| | |||||||||||  ||| ||||||||||||||||||    
T  19236799 tcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaatttcccaattttaccttaagaacagttcaattgat 19236898  T
Q  115 taattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaatcagttcctaagttct 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  19236899 taattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatcagttcctaagttct 19236998  T
Q  215 tctctcttggtcttctctccttgcctttgctt 246  Q
    ||||||||||||||||||||||||||| ||||    
T  19236999 tctctcttggtcttctctccttgccttagctt 19237030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 4 - 246
Target Start/End: Original strand, 22461044 - 22461286
Alignment:
Q  4 catactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcgcctaaagaaca 103  Q
    |||||||| ||||||||||| ||| || ||||||||| |||||||||||||||||||| ||||| |||||||| | |||||||||||  ||| |||||||    
T  22461044 catactaaacatcaaagtacgacaatataaacctgatccttataccttttctttcaaa-tcatccttaaccctaaatttcccaattttaccttaagaaca 22461142  T
Q  104 gttcaattgattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaatcag 202  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||   ||||||||||||||    
T  22461143 gttcaattgattaatttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaggcacagcaaatcag 22461242  T
Q  203 ttcctaagttcttctctcttggtcttctctccttgcctttgctt 246  Q
    ||| ||||||||||||||||||||||||||||||||||| ||||    
T  22461243 ttcttaagttcttctctcttggtcttctctccttgccttagctt 22461286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 4 - 246
Target Start/End: Original strand, 22467668 - 22467910
Alignment:
Q  4 catactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcgcctaaagaaca 103  Q
    |||||||| ||||||||||| ||| || ||||||||| |||||||||||||||||||| ||||| |||||||| | |||||||||||  ||| |||||||    
T  22467668 catactaaacatcaaagtacgacaatataaacctgatccttataccttttctttcaaa-tcatccttaaccctaaatttcccaattttaccttaagaaca 22467766  T
Q  104 gttcaattgattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaatcag 202  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||   ||||||||||||||    
T  22467767 gttcaattgattaatttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaggcacagcaaatcag 22467866  T
Q  203 ttcctaagttcttctctcttggtcttctctccttgcctttgctt 246  Q
    ||| ||||||||||||||||||||||||||||||||||| ||||    
T  22467867 ttcttaagttcttctctcttggtcttctctccttgccttagctt 22467910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 20772856 - 20773090
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcgcctaaaga 100  Q
    ||||||||||||||||||| |||||||||| |||||||||||||| || ||||||| ||||||||||||||||||| | |||||||||||  ||| ||||    
T  20772856 aatcatactaatcatcaaa-tacaacattataaacctgattcttacacattttctt-caaaatcatcattaaccctaaatttcccaattttaccttaaga 20772953  T
Q  101 acagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaatc 200  Q
    |||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||  || ||||||||||    
T  20772954 acagttaaattgattaattttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgcaaagataa--agtacagcaaatc 20773051  T
Q  201 agttcctaagttcttctctcttggtcttctctccttgcct 240  Q
    | |||||||| |||||||||||||||||||| ||||||||    
T  20773052 aattcctaagctcttctctcttggtcttctc-ccttgcct 20773090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 20781631 - 20781865
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcgcctaaaga 100  Q
    ||||||| ||||||||||| |||||||||| |||||||||||||| || ||||||| ||||||||||||||||||| | |||||||||||  ||| ||||    
T  20781631 aatcataataatcatcaaa-tacaacattataaacctgattcttacacattttctt-caaaatcatcattaaccctaaatttcccaattttaccttaaga 20781728  T
Q  101 acagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaatc 200  Q
    |||||| ||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||  ||  || ||||||||||    
T  20781729 acagttaaattgattaattttcagaaatcatatattataattattgaaagataatcccacccttaccttagaattgcaaagataa--agtacagcaaatc 20781826  T
Q  201 agttcctaagttcttctctcttggtcttctctccttgcct 240  Q
    | |||||||| |||||||||||||||||||| ||||||||    
T  20781827 aattcctaagctcttctctcttggtcttctc-ccttgcct 20781865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 24930097 - 24929862
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcgcctaaaga 100  Q
    ||||||||||||||||||| |||||||||| |||||||||||||| || ||| ||| || |||||||||||||||| | |||||||||||  ||| ||||    
T  24930097 aatcatactaatcatcaaa-tacaacattataaacctgattcttacacatttcctt-cagaatcatcattaaccctaaatttcccaattttaccttaaga 24930000  T
Q  101 acagttcaattgattaattttc-agaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaat 199  Q
    |||||| ||||||||||||||  |||||| ||||||||  ||||||||||||||||||||||||||||||||||||| ||||  ||  ||  |||||| |    
T  24929999 acagttaaattgattaattttttagaaatcatatattagaactattgaaagataatcccacccttaccttagaattgtaaagataa--agtgcagcaagt 24929902  T
Q  200 cagttcctaagttcttctctcttggtcttctctccttgcct 240  Q
    || |||||||| |||||||||||||||||||| ||||||||    
T  24929901 caattcctaagctcttctctcttggtcttctc-ccttgcct 24929862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 28896210 - 28895967
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcg-cctaaag 99  Q
    ||||||||||||||| ||| |||||| | | |||||||| | |||  | ||||||| |||||||||||| || ||| |||||||||||||   ||| |||    
T  28896210 aatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaatttttaccttaag 28896113  T
Q  100 aacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaat 199  Q
    |||| || ||| | ||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||| |||||  ||||||||||||    
T  28896112 aacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacggcaa-aagcacagcaaat 28896014  T
Q  200 cagttcctaagttcttctctcttggtcttctctccttgcctttgctt 246  Q
    || |||||| |||||||||||||||||||||||||||||||| ||||    
T  28896013 caattcctaggttcttctctcttggtcttctctccttgccttagctt 28895967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 28925036 - 28924793
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcg-cctaaag 99  Q
    ||||||||||||||| ||| |||||| | | |||||||| | |||  | ||||||| |||||||||||| || ||| |||||||||||||   ||| |||    
T  28925036 aatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaatttttaccttaag 28924939  T
Q  100 aacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaat 199  Q
    |||| || ||| | ||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||| |||||  ||||||||||||    
T  28924938 aacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacggcaa-aagcacagcaaat 28924840  T
Q  200 cagttcctaagttcttctctcttggtcttctctccttgcctttgctt 246  Q
    || |||||| |||||||||||||||||||||||||||||||| ||||    
T  28924839 caattcctaggttcttctctcttggtcttctctccttgccttagctt 28924793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 28909458 - 28909215
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcg-cctaaag 99  Q
    ||||||||||||||| ||| |||||| | | |||||||| | |||  | ||||||| |||||||||||| || ||| |||||||||||||   ||| |||    
T  28909458 aatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaatttttaccttaag 28909361  T
Q  100 aacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaat 199  Q
    |||| || ||| | ||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||| | |||  ||||||||||||    
T  28909360 aacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacgacaa-aagcacagcaaat 28909262  T
Q  200 cagttcctaagttcttctctcttggtcttctctccttgcctttgctt 246  Q
    || |||||| |||||||||||||||||||||||||||||||| ||||    
T  28909261 caattcctaggttcttctctcttggtcttctctccttgccttagctt 28909215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 28945853 - 28945610
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcg-cctaaag 99  Q
    ||||||||||||||| ||| |||||| | | |||||||| | |||  | ||||||| |||||||||||| || ||| |||||||||||||   ||| |||    
T  28945853 aatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaatttttaccttaag 28945756  T
Q  100 aacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaat 199  Q
    |||| || ||| | ||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||| | |||  ||||||||||||    
T  28945755 aacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacgacaa-aagcacagcaaat 28945657  T
Q  200 cagttcctaagttcttctctcttggtcttctctccttgcctttgctt 246  Q
    || |||||| |||||||||||||||||||||||||||||||| ||||    
T  28945656 caattcctaggttcttctctcttggtcttctctccttgccttagctt 28945610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 28889506 - 28889263
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcg-cctaaag 99  Q
    ||||||||||||||| ||| |||||| | | |||||||| | |||  | ||||||| |||||||||||| || ||| |||||||||||||   ||| |||    
T  28889506 aatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaatttttaccttaag 28889409  T
Q  100 aacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaat 199  Q
    |||| || ||| | ||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||| |||||  ||||  ||||||    
T  28889408 aacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacggcaa-aagcaatgcaaat 28889310  T
Q  200 cagttcctaagttcttctctcttggtcttctctccttgcctttgctt 246  Q
    || |||||| |||||||||||||||||||||||||||||||| ||||    
T  28889309 caattcctaggttcttctctcttggtcttctctccttgccttagctt 28889263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 20820105 - 20820279
Alignment:
Q  2 atcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcgcctaaagaa 101  Q
    |||||||| ||||||||| |||||||||| |||||||| |||||| | || |||| ||||||||||||||||||| ||||||| |||||  ||| |||||    
T  20820105 atcatactcatcatcaaa-tacaacattataaacctgaatcttatgcattctctt-caaaatcatcattaaccctaattttcc-aattttaccttaagaa 20820201  T
Q  102 cagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 179  Q
    | ||| ||||  |||||  |||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  20820202 cggttgaattacttaatcatcagaaattatatattaacactattgaaagatgatcccacccttaccttagaattgcaa 20820279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 20827205 - 20827379
Alignment:
Q  2 atcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcgcctaaagaa 101  Q
    |||||||| ||||||||| |||||||||| |||||||| |||||| | || |||| ||||||||||||||||||| ||||||| |||||  ||| |||||    
T  20827205 atcatactcatcatcaaa-tacaacattataaacctgaatcttatgcattctctt-caaaatcatcattaaccctaattttcc-aattttaccttaagaa 20827301  T
Q  102 cagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 179  Q
    | ||| ||||  |||||  |||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  20827302 cggttgaattacttaatcatcagaaattatatattaacactattgaaagatgatcccacccttaccttagaattgcaa 20827379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 116 - 236
Target Start/End: Complemental strand, 38144591 - 38144472
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca-aaggcaattagcacagca-aatcagttcctaagttc 213  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||  ||||| || |  |||| ||||||| |||| ||||||||||||    
T  38144591 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaatg--atta-cacagcacaatcggttcctaagttc 38144495  T
Q  214 ttctctcttggtcttctctcctt 236  Q
    |||||||||||||||||||||||    
T  38144494 ttctctcttggtcttctctcctt 38144472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 97 - 170
Target Start/End: Complemental strand, 18408018 - 18407944
Alignment:
Q  97 aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 170  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||||| |||||| ||||| || |||||||||||||    
T  18408018 aagaacaattcaattagatcaattttcagaaattatatattatgattattgagagatagtctcacccttacctta 18407944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 112 - 178
Target Start/End: Original strand, 34830081 - 34830146
Alignment:
Q  112 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 178  Q
    |||| |||||||||||||||| ||||  | |||||||||||||||||||||||||||||||||||||    
T  34830081 gattgattttcagaaattatacattaa-attattgaaagataatcccacccttaccttagaattgca 34830146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 170
Target Start/End: Complemental strand, 23111274 - 23111200
Alignment:
Q  97 aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 170  Q
    ||||||| ||||||| ||| ||||||||||||||||||| ||||| |||||| ||||| || |||||||||||||    
T  23111274 aagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23111200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 22438802 - 22438746
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttaga 172  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||||    
T  22438802 aattttcagaaattatacattatgattattgagagatagtctcacccttaccttaga 22438746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 19512387 - 19512441
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 170  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  19512387 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 19512441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 28370109 - 28370055
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 170  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  28370109 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 28370055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 23528634 - 23528686
Alignment:
Q  119 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 171  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  23528634 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 23528686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 179; Significance: 1e-96; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 16090960 - 16091206
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcgcctaaaga 100  Q
    |||||||||||||||  || |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||| | ||    
T  16090960 aatcatactaatcattcaaatacaacattataaacctgattcttacaccttttctttcaaaatcatcattaacccttattttcccaattttaccttagga 16091059  T
Q  101 acagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagc-aaat 199  Q
    |||||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||    
T  16091060 acagtttaattgattaactttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaaat 16091159  T
Q  200 cagttcctaagttcttctctcttggtcttctctccttgcctttgctt 246  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||    
T  16091160 cagttcctaagttcttctctcttggtcttctctccttgccttagctt 16091206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 20906630 - 20906386
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcgcctaaaga 100  Q
    ||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| || ||||||||  ||| ||||    
T  20906630 aatcatactaaacatcaaagtacaacattataaacttgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaattttaccttaaga 20906532  T
Q  101 acagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaatc 200  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||| |||||||||    
T  20906531 atagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaggacaaatagctcagcaaatc 20906432  T
Q  201 agttcctaagttcttctctcttggtcttctctccttgcctttgctt 246  Q
     |||||||||||||||||||||||||||||| ||||||||| ||||    
T  20906431 cgttcctaagttcttctctcttggtcttctccccttgccttagctt 20906386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 29181279 - 29181033
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcgcctaaaga 100  Q
    |||||||||||||||  || |||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||  ||| ||||    
T  29181279 aatcatactaatcattcaaatacaacattataagcctgattcttacaccttttctttcaaaatcatcattaacccttattttccaaattttaccttaaga 29181180  T
Q  101 acagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagc-aaat 199  Q
    | |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||    
T  29181179 atagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaaat 29181080  T
Q  200 cagttcctaagttcttctctcttggtcttctctccttgcctttgctt 246  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||    
T  29181079 cagttcctaagttcttctctcttggtcttctctccttgccttagctt 29181033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 71 - 246
Target Start/End: Original strand, 2971209 - 2971384
Alignment:
Q  71 aacccttattttcccaatttcgcctaaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 170  Q
    ||||||||| ||||||||||  ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2971209 aacccttatcttcccaattttaccttaagaacagttcaattgattaattttcagaaattataaattatgactattgaaagataatcccacccttacctta 2971308  T
Q  171 gaattgcaaaggcaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctttgctt 246  Q
    ||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2971309 gaattgcaaagacaaaaagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgccttagctt 2971384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 112 - 246
Target Start/End: Complemental strand, 14319688 - 14319554
Alignment:
Q  112 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaatcagttcctaagt 211  Q
    ||||||||||||||||||||| ||||  |  ||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||| ||||||||||    
T  14319688 gattaattttcagaaattatacattaaaatcattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatccgttcctaagt 14319589  T
Q  212 tcttctctcttggtcttctctccttgcctttgctt 246  Q
    ||||||||||| |||||||||||||||||| ||||    
T  14319588 tcttctctcttagtcttctctccttgccttagctt 14319554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 112 - 246
Target Start/End: Original strand, 14230777 - 14230911
Alignment:
Q  112 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaatcagttcctaagt 211  Q
    ||||||||||||||||||||| ||||     ||||||||||||||||||||||||||||||||||||||| |||  |||||  |||||| ||||||||||    
T  14230777 gattaattttcagaaattatacattaaattcattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacgacaaatccgttcctaagt 14230876  T
Q  212 tcttctctcttggtcttctctccttgcctttgctt 246  Q
    ||| |||||||||||||||||||||||||| ||||    
T  14230877 tctcctctcttggtcttctctccttgccttagctt 14230911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 2966850 - 2966926
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaaccctt 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  2966850 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaaacatcattaaccctt 2966926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 2465248 - 2465474
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcgcctaaaga 100  Q
    ||||||| ||||||||||| || ||||||| |||||| | ||||| || ||||||| ||||||   |||||||||| |||| || | |||  ||  || |    
T  2465248 aatcatattaatcatcaaa-tataacattataaacctaaatcttacacattttctt-caaaattgccattaaccctaatttcccaatttttaccataaaa 2465345  T
Q  101 acagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaatc 200  Q
    |||||| ||||| ||||||||||||||| ||||||||| | ||||||| ||| ||||||||||||||||||||||||||||  ||  ||  ||||||| |    
T  2465346 acagttaaattgcttaattttcagaaatcatatattatcattattgaaggatgatcccacccttaccttagaattgcaaagataa--agtgcagcaaacc 2465443  T
Q  201 agttcctaagttcttctctcttggtcttctc 231  Q
    | || ||||| ||||||||||||||||||||    
T  2465444 aatttctaagctcttctctcttggtcttctc 2465474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 116 - 241
Target Start/End: Original strand, 14567204 - 14567329
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaatcagttcctaagttctt 215  Q
    ||||||||||||  ||||||||| |  |||||| | ||  | ||||||||||||||||||| | || |||  ||||||||||||| ||||||||||||||    
T  14567204 aattttcagaaaccatatattataatcattgaaggttagcctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 14567303  T
Q  216 ctctcttggtcttctctccttgcctt 241  Q
    ||||||||||||| ||||||||||||    
T  14567304 ctctcttggtcttttctccttgcctt 14567329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 3857534 - 3857308
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcg---cctaa 97  Q
    ||||||| ||||||||||| |||||||||| |||||| | ||||| || ||||||| ||||||   |||||||||| |||| ||||||||     ||  |    
T  3857534 aatcatattaatcatcaaa-tacaacattataaacctaaatcttacacattttctt-caaaattgccattaaccctaattt-cccaatttttttaccata 3857438  T
Q  98 agaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaa 197  Q
    | ||||||| ||||| ||||||||||||||| ||||||||| | ||||| ||||| |||||||||||||||||||||||| |||  ||  ||  ||||||    
T  3857437 aaaacagttaaattgcttaattttcagaaatcatatattatcattattg-aagatgatcccacccttaccttagaattgc-aagataa--agtgcagcaa 3857342  T
Q  198 atcagttcctaagttcttctctcttggtcttctc 231  Q
    | || || ||||| ||||||||||||||||||||    
T  3857341 accaatttctaagctcttctctcttggtcttctc 3857308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 118 - 181
Target Start/End: Original strand, 31155396 - 31155459
Alignment:
Q  118 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaag 181  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||    
T  31155396 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaag 31155459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 11382925 - 11382871
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 170  Q
    ||||||||||||||||||||||||| |||||| ||||| || |||||||||||||    
T  11382925 aattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11382871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 11389402 - 11389348
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 170  Q
    ||||||||||||||||||||||||| |||||| ||||| || |||||||||||||    
T  11389402 aattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11389348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 21231014 - 21230952
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 178  Q
    ||||||||||||||||||| ||||| |||||| ||||| || ||||||||||||||| |||||    
T  21231014 aattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgca 21230952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 171
Target Start/End: Original strand, 14422985 - 14423040
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 171  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  14422985 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 14423040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 16009577 - 16009631
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 170  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  16009577 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 16009631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 12590695 - 12590643
Alignment:
Q  119 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 171  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  12590695 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 12590643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 13007435 - 13007487
Alignment:
Q  119 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 171  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  13007435 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 13007487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 20311106 - 20311050
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttaga 172  Q
    |||||||||||||||||  |||||| |||||| ||||| || |||||||||||||||    
T  20311106 aattttcagaaattatacgttatgattattgagagatagtctcacccttaccttaga 20311050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 13679494 - 13679548
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 170  Q
    |||||||| ||||||||||| ||||  ||||||||||| || |||||||||||||    
T  13679494 aattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 13679548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 15168176 - 15168230
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 170  Q
    ||||||||||||||||| ||||||| ||| || ||||| || |||||||||||||    
T  15168176 aattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 15168230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 12709895 - 12709843
Alignment:
Q  119 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 171  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  12709895 tttcaggaattataaattatgattattgagagatagtctcacccttaccttag 12709843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 13122966 - 13122914
Alignment:
Q  119 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 171  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  13122966 tttcaggaattataaattatgattattgagagatagtctcacccttaccttag 13122914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 13743712 - 13743764
Alignment:
Q  119 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 171  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  13743712 tttcaggaattataaattatgattattgagagatagtctcacccttaccttag 13743764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 168
Target Start/End: Original strand, 16677296 - 16677348
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 168  Q
    |||||| |||||||||| ||||||| |||||| ||||| || |||||||||||    
T  16677296 aatttttagaaattatagattatgattattgagagatagtctcacccttacct 16677348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 168
Target Start/End: Original strand, 17651532 - 17651584
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 168  Q
    |||||| |||||||||| ||||||| |||||| ||||| || |||||||||||    
T  17651532 aatttttagaaattatagattatgattattgagagatagtctcacccttacct 17651584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 164; Significance: 9e-88; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 4 - 246
Target Start/End: Complemental strand, 20008114 - 20007872
Alignment:
Q  4 catactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcgcctaaagaaca 103  Q
    |||||||| ||||||||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||| | |||||||||||  ||| |||||||    
T  20008114 catactaaacatcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaatttcccaattttaccttaagaaca 20008015  T
Q  104 gttcaattgattaa-ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaatcag 202  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||  |||||||||||| ||    
T  20008014 gttcaattgattaatttttcataaattatatattatgactattgaaagatgatcccacccttaccttagaattgcaaagacaa-aagcacagcaaatgag 20007916  T
Q  203 ttcctaagttcttctctcttggtcttctctccttgcctttgctt 246  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  20007915 ttcctaagttcttctctcttggtcttctctccttgccttagctt 20007872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 9099240 - 9099005
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcgcctaaaga 100  Q
    ||||||||||||||||||| |||||||||| |||||||||||||| || ||||||| || |||||||||||||||| | |||||||||||  ||| ||||    
T  9099240 aatcatactaatcatcaaa-tacaacattataaacctgattcttacacattttctt-cagaatcatcattaaccctaaatttcccaattttaccttaaga 9099143  T
Q  101 acagttcaattgattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaat 199  Q
    |||||| |||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||  ||  ||||||||    
T  9099142 acagttaaattgattaatttttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgcaaagataa--agtgcagcaaat 9099045  T
Q  200 cagttcctaagttcttctctcttggtcttctctccttgcct 240  Q
    || |||||||| |||||||||||||||||||| ||||||||    
T  9099044 caattcctaagctcttctctcttggtcttctc-ccttgcct 9099005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 21364648 - 21364423
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcgcctaaaga 100  Q
    ||||||| ||||||||||| |||||||||| |||||| | ||||| |  |||||||  |||||   |||||||||| |||| ||||||||  ||  || |    
T  21364648 aatcatattaatcatcaaa-tacaacattataaacctaagtcttacatattttcttcaaaaatgc-cattaaccctaattt-cccaattttaccataa-a 21364553  T
Q  101 acagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaatc 200  Q
    |||||| ||||| ||||||||||||||| ||||||||| | || |||| |||||||||||||||||||| ||||||||||| |||  ||||||||||| |    
T  21364552 acagttaaattgcttaattttcagaaatcatatattatcattactgaaggataatcccacccttacctttgaattgcaaagacaa-aagcacagcaaaac 21364454  T
Q  201 agttcctaagttcttctctcttggtcttctc 231  Q
    | |||||| ||||||||||||||||||||||    
T  21364453 aattcctaggttcttctctcttggtcttctc 21364423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 23968630 - 23968405
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcgcctaaaga 100  Q
    ||||||| ||||||||||| |||||||||| |||||| | ||||| |  |||||||  |||||   |||||||||| |||| ||||||||  ||  || |    
T  23968630 aatcatattaatcatcaaa-tacaacattataaacctaagtcttacatattttcttcaaaaatgc-cattaaccctaattt-cccaattttaccataa-a 23968535  T
Q  101 acagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaatc 200  Q
    |||||| ||||| ||||||||||||||| ||||||||| | || |||| |||||||||||||||||||| ||||||||||| |||  ||||||||||| |    
T  23968534 acagttaaattgcttaattttcagaaatcatatattatcattactgaaggataatcccacccttacctttgaattgcaaagacaa-aagcacagcaaaac 23968436  T
Q  201 agttcctaagttcttctctcttggtcttctc 231  Q
    | |||||| ||||||||||||||||||||||    
T  23968435 aattcctaggttcttctctcttggtcttctc 23968405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 112 - 241
Target Start/End: Original strand, 31252419 - 31252549
Alignment:
Q  112 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaa--ttagcacagcaaatcagttcctaa 209  Q
    ||||||||||||||||||||||||||| |  ||| |||||||||| |||||||||||||||||||||||| |||    | |||||| |||| ||||||||    
T  31252419 gattaattttcagaaattatatattataatcattaaaagataatctcacccttaccttagaattgcaaagacaaagaaaacacagc-aatcggttcctaa 31252517  T
Q  210 gttcttctctcttggtcttctctccttgcctt 241  Q
    ||||||||||||||||||||||||||||||||    
T  31252518 gttcttctctcttggtcttctctccttgcctt 31252549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 118 - 246
Target Start/End: Complemental strand, 11288721 - 11288596
Alignment:
Q  118 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaatcagttcctaagttcttct 217  Q
    |||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||| ||| |||  | |||||| |||||||||||||| ||||||    
T  11288721 ttttcagaaattatatattaagatcattgaaagataatcccacccttaccttagaattgccaagacaa-aaacacagc-aatcagttcctaagctcttct 11288624  T
Q  218 ctcttggtcttctctccttgcctttgctt 246  Q
    |||||||||||||| ||||||||| ||||    
T  11288623 ctcttggtcttctc-ccttgccttagctt 11288596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 118 - 181
Target Start/End: Original strand, 15458492 - 15458555
Alignment:
Q  118 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaag 181  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||    
T  15458492 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaag 15458555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 118 - 181
Target Start/End: Original strand, 15465087 - 15465150
Alignment:
Q  118 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaag 181  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||    
T  15465087 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaag 15465150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 246
Target Start/End: Complemental strand, 34640041 - 34639910
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaa--ttagcacagcaaatcagttcctaagttc 213  Q
    ||||||||||||||||| |||| || |||||| ||||| || |||||||||||||||||||| ||| |||    | |||||| ||||  |||   |||||    
T  34640041 aattttcagaaattatagattaagattattgagagatagtctcacccttaccttagaattgcgaagacaaagaaaacacagc-aatcgattctctagttc 34639943  T
Q  214 ttctctcttggtcttctctccttgcctttgctt 246  Q
    |||||||||||||||||||||||||||| ||||    
T  34639942 ttctctcttggtcttctctccttgccttagctt 34639910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 246
Target Start/End: Complemental strand, 34646715 - 34646584
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaa--ttagcacagcaaatcagttcctaagttc 213  Q
    ||||||||||||||||| |||| || |||||| ||||| || |||||||||||||||||||| ||| |||    | |||||| ||||  |||   |||||    
T  34646715 aattttcagaaattatagattaagattattgagagatagtctcacccttaccttagaattgcgaagacaaagaaaacacagc-aatcgattctctagttc 34646617  T
Q  214 ttctctcttggtcttctctccttgcctttgctt 246  Q
    |||||||||||||||||||||||||||| ||||    
T  34646616 ttctctcttggtcttctctccttgccttagctt 34646584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 143 - 246
Target Start/End: Complemental strand, 28288537 - 28288437
Alignment:
Q  143 attgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgccttt 242  Q
    ||||| ||||| || |||||||||||||||||||||||| |||  | |||||||| |||||||||||| | |||||||||||||||||| |||||||||     
T  28288537 attgagagatagtctcacccttaccttagaattgcaaagacaaaaa-cacagcaa-tcagttcctaagcttttctctcttggtcttctc-ccttgcctta 28288441  T
Q  243 gctt 246  Q
    ||||    
T  28288440 gctt 28288437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 10986235 - 10986173
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 178  Q
    |||||| |||||||||| ||||||| |||||||||||| || |||||||||||||||||||||    
T  10986235 aatttttagaaattatagattatgattattgaaagatagtctcacccttaccttagaattgca 10986173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 153 - 246
Target Start/End: Original strand, 24563475 - 24563569
Alignment:
Q  153 aatcccacccttaccttagaattgcaaaggcaattag--cacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctttgctt 246  Q
    |||| |||||||||||||||||||||||| |||  |   |||||||| ||  ||||  ||||||||||||||||||||||||||||||||| ||||    
T  24563475 aatctcacccttaccttagaattgcaaagacaaagaaaacacagcaa-tcgattccctagttcttctctcttggtcttctctccttgccttagctt 24563569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 171
Target Start/End: Complemental strand, 29614201 - 29614146
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 171  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  29614201 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 29614146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 4477858 - 4477912
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 170  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  4477858 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 4477912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 23839199 - 23839253
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 170  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  23839199 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 23839253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 24512898 - 24512836
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 178  Q
    ||||||||||||||||||| ||||| |||||| ||||| || |||||| |||||||| |||||    
T  24512898 aattttcagaaattatatactatgattattgagagatagtctcaccctcaccttagatttgca 24512836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 24641644 - 24641607
Alignment:
Q  209 agttcttctctcttggtcttctctccttgcctttgctt 246  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  24641644 agttcttctctcttggtcttctctccttgccttagctt 24641607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 12168366 - 12168418
Alignment:
Q  119 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 171  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  12168366 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 12168418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 19287275 - 19287327
Alignment:
Q  119 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 171  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  19287275 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 19287327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 19785921 - 19785869
Alignment:
Q  119 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 171  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  19785921 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 19785869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 19878459 - 19878511
Alignment:
Q  119 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 171  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  19878459 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 19878511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 171
Target Start/End: Complemental strand, 930150 - 930095
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 171  Q
    |||||||||||| |||| ||||||| |||||| ||||| || ||||||||||||||    
T  930150 aattttcagaaactatagattatgattattgagagatagtctcacccttaccttag 930095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 171
Target Start/End: Original strand, 18800438 - 18800493
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 171  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||| ||||    
T  18800438 aattttcagaaattatagattatgattattgagagatagtctcacccttacattag 18800493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 170
Target Start/End: Original strand, 9187498 - 9187550
Alignment:
Q  118 ttttcagaaattatatattatgactattgaaagataatcccacccttacctta 170  Q
    |||||||||||||| ||||| || |||||| ||||| || |||||||||||||    
T  9187498 ttttcagaaattatgtattaagattattgagagatagtctcacccttacctta 9187550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 19884235 - 19884287
Alignment:
Q  119 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 171  Q
    |||||||||||||| ||||||| |||||| ||||| || |||||| |||||||    
T  19884235 tttcagaaattatagattatgattattgagagatagtctcaccctaaccttag 19884287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 159; Significance: 9e-85; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 135324 - 135568
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcgccta-aag 99  Q
    ||||||||||| ||||||| |||||||  | |||||||||||||| |||||||||||||||||||||||||||||||| || | ||||||  |||  |||    
T  135324 aatcatactaa-catcaaattacaacacaataaacctgattcttacaccttttctttcaaaatcatcattaacccttaatt-ctcaattttacctttaag 135421  T
Q  100 aacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaat 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  135422 aacagttcaattgattaattttcagaaattatatattatgactattgaaagataatctcacgcttaccttagaattgcaaagacaaatagcacagcaaat 135521  T
Q  200 cagttcctaagttcttctctcttggtcttctctccttgcctttgctt 246  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||    
T  135522 cagttcctaagctcttctctcttggtcttctctccttgccttagctt 135568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 156; Significance: 6e-83; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 50141 - 49894
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcg-cctaaag 99  Q
    ||||||||||||| |  || || ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||   ||| |||    
T  50141 aatcatactaatctttcaaatataacattataaacctgattcttacaccttttctttcaaaatcatcattaacccttattttcccaatttttaccttaag 50042  T
Q  100 aacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagc-aaa 198  Q
    ||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| | |||    
T  50041 aacagtttaattgattaatttttagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacaacaaaa 49942  T
Q  199 tcagttcctaagttcttctctcttggtcttctctccttgcctttgctt 246  Q
    ||||||||||||||||||||||||||| ||||||| ||||||| ||||    
T  49941 tcagttcctaagttcttctctcttggttttctctctttgccttagctt 49894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 156; Significance: 6e-83; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 25181099 - 25180880
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcgcctaaaga 100  Q
    ||||||||||| ||||||||||||| | || |||||||||   |||||||||||||||||||||||| |||||||| | |||||||||||  ||| ||||    
T  25181099 aatcatactaaacatcaaagtacaaaaatataaacctgatcaatataccttttctttcaaaatcatccttaaccctaaatttcccaattttaccttaaga 25181000  T
Q  101 acagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaatc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||    
T  25180999 acagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatc 25180900  T
Q  201 agttcctaagttcttctctc 220  Q
    ||||||||||||||||||||    
T  25180899 agttcctaagttcttctctc 25180880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 10462 - 10679
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcgcctaaaga 100  Q
    ||||||||||| ||||||||||||||| || |||||| || | |||||||||||||||||||||||| |||||||| | |||||||||||  ||| ||||    
T  10462 aatcatactaaacatcaaagtacaacaatataaaccttatccctataccttttctttcaaaatcatccttaaccctaaatttcccaattttaccttaaga 10561  T
Q  101 acagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaatc 200  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||  |||||||||||||    
T  10562 acaattcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaatttcaaagacaaaaagcacagcaaatc 10661  T
Q  201 agttcctaagttcttctc 218  Q
    ||||||||||| ||||||    
T  10662 agttcctaagtccttctc 10679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 112 - 246
Target Start/End: Complemental strand, 27207778 - 27207644
Alignment:
Q  112 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaatcagttcctaagt 211  Q
    ||||||||||||||||||||| ||||  |  ||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||| ||||||||||    
T  27207778 gattaattttcagaaattatacattaaaatcattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatccgttcctaagt 27207679  T
Q  212 tcttctctcttggtcttctctccttgcctttgctt 246  Q
    |||||||||||||||||||||||||||||| ||||    
T  27207678 tcttctctcttggtcttctctccttgccttagctt 27207644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 112 - 246
Target Start/End: Original strand, 26885179 - 26885312
Alignment:
Q  112 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaatcagttcctaagt 211  Q
    ||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||| || |||  |||||| |||||| ||||||||||    
T  26885179 gattaattttcagaaattatacatta-gattattgaaagataatcccacccttaccttagaattgcagagacaaaaagcacatcaaatccgttcctaagt 26885277  T
Q  212 tcttctctcttggtcttctctccttgcctttgctt 246  Q
    |||||||||||||| ||||||||||||||| ||||    
T  26885278 tcttctctcttggttttctctccttgccttagctt 26885312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 118 - 246
Target Start/End: Complemental strand, 23168351 - 23168224
Alignment:
Q  118 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaatcagttcctaagttcttct 217  Q
    ||||||||||||||| |||||||  | |||||||||||||||||||||||||||||||||| |  |||  ||||||||||| | || |||||||||||||    
T  23168351 ttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaaacaa-aagcacagcaaaaccgtccctaagttcttct 23168253  T
Q  218 ctcttggtcttctctccttgcctttgctt 246  Q
    |||||||||||||||||||||||| ||||    
T  23168252 ctcttggtcttctctccttgccttagctt 23168224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 118 - 246
Target Start/End: Complemental strand, 23579608 - 23579481
Alignment:
Q  118 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaatcagttcctaagttcttct 217  Q
    ||||||||||||||| |||||||  | |||||||||||||||||||||||||||||||||| |  |||  ||||||||||| | || |||||||||||||    
T  23579608 ttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaaacaa-aagcacagcaaaaccgtccctaagttcttct 23579510  T
Q  218 ctcttggtcttctctccttgcctttgctt 246  Q
    |||||||||||||||||||||||| ||||    
T  23579509 ctcttggtcttctctccttgccttagctt 23579481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 170
Target Start/End: Original strand, 23265123 - 23265197
Alignment:
Q  97 aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 170  Q
    ||||||| ||||||| ||| ||||||||||||||||||| ||||| |||||| ||||| || |||||||||||||    
T  23265123 aagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23265197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 170
Target Start/End: Original strand, 23280191 - 23280265
Alignment:
Q  97 aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 170  Q
    ||||||| ||||||| ||| ||||||||||||||||||| ||||| |||||| ||||| || |||||||||||||    
T  23280191 aagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23280265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 153 - 246
Target Start/End: Complemental strand, 27366566 - 27366472
Alignment:
Q  153 aatcccacccttaccttagaattgcaaaggcaattag--cacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctttgctt 246  Q
    |||| |||||||||||||||||||||||| |||  |   |||||||| ||  ||||  ||||||||||||||||||||||||||||||||| ||||    
T  27366566 aatctcacccttaccttagaattgcaaagacaaagaaaacacagcaa-tcgattccctagttcttctctcttggtcttctctccttgccttagctt 27366472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 246
Target Start/End: Complemental strand, 5706075 - 5705947
Alignment:
Q  119 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaa--ttagcacagcaaatcagttcctaagttcttc 216  Q
    |||||| ||||||| ||||||| || ||| ||||| || |||||||||||||||||||| ||| |||    | |||||| ||||  |||   ||||||||    
T  5706075 tttcaggaattatagattatgattaatgagagatagtctcacccttaccttagaattgcgaagacaaagaaaacacagc-aatcgattctctagttcttc 5705977  T
Q  217 tctcttggtcttctctccttgcctttgctt 246  Q
    ||||||||||||||||||| ||||| ||||    
T  5705976 tctcttggtcttctctcctagccttagctt 5705947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 6483718 - 6483772
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 170  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  6483718 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 6483772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 6487185 - 6487239
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 170  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  6487185 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 6487239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 21908360 - 21908414
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 170  Q
    |||||||||||||||||||| |||| |||||| ||||| || |||||||||||||    
T  21908360 aattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 21908414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 26583830 - 26583882
Alignment:
Q  119 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 171  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  26583830 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 26583882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 150; Significance: 2e-79; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 16147000 - 16146791
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcgcctaaaga 100  Q
    |||||||||||||||  || |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||  ||| ||||    
T  16147000 aatcatactaatcattcaaatacaacattataaacctgattcttacaccttttctttcaaaatcatcattaacccttattttccaaattttaccttaaga 16146901  T
Q  101 acagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagc-aaat 199  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||    
T  16146900 acagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaaat 16146801  T
Q  200 cagttcctaa 209  Q
    ||||||||||    
T  16146800 cagttcctaa 16146791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 113 - 178
Target Start/End: Original strand, 27906263 - 27906328
Alignment:
Q  113 attaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 178  Q
    |||||||||||||||||||| |||||||  ||||||||||||||||||||||| ||||||||||||    
T  27906263 attaattttcagaaattatacattatgatcattgaaagataatcccacccttatcttagaattgca 27906328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 57 - 168
Target Start/End: Original strand, 14486601 - 14486713
Alignment:
Q  57 tcaaaatcatcattaacccttattttcccaatttcgccta-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataa 154  Q
    ||||||||||||| |||||| || ||||||||||   ||  ||||||| ||||||| |||||||||||||||||||||||||||||  |||||| ||||     
T  14486601 tcaaaatcatcatcaaccct-atattcccaattttatcttcaagaacaattcaattcgattaattttcagaaattatatattatgatcattgaaggatag 14486699  T
Q  155 tcccacccttacct 168  Q
    || |||||||||||    
T  14486700 tctcacccttacct 14486713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 246
Target Start/End: Original strand, 53483708 - 53483836
Alignment:
Q  119 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaa--ttagcacagcaaatcagttcctaagttcttc 216  Q
    |||||| ||||||| ||||||| |||||| ||||| || |||||||||||||||||||| ||| |||    | |||||| ||||  |||   ||||||||    
T  53483708 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagaattgcgaagacaaagaaaacacagc-aatcgattctctagttcttc 53483806  T
Q  217 tctcttggtcttctctccttgcctttgctt 246  Q
    ||||||||||||||||||| ||||| ||||    
T  53483807 tctcttggtcttctctcctagccttagctt 53483836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 15408140 - 15408196
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttaga 172  Q
    ||||||||||||||||||| ||||| |||||| ||||| || |||||||||||||||    
T  15408140 aattttcagaaattatatactatgattattgagagatagtctcacccttaccttaga 15408196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 171
Target Start/End: Original strand, 11848114 - 11848169
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 171  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  11848114 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 11848169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 8045884 - 8045832
Alignment:
Q  119 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 171  Q
    |||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  8045884 tttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 8045832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 148; Significance: 3e-78; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 32 - 246
Target Start/End: Complemental strand, 2051 - 1837
Alignment:
Q  32 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcgccta-aagaacagttcaattgattaattttcagaaatta 130  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||| || ||||||||  | |  ||||||||||||||||||||||||||||||||||    
T  2051 aaacctaattcttacaccttttctttcaaaatcatcattaacccttaatt-cccaattttactttcaagaacagttcaattgattaattttcagaaatta 1953  T
Q  131 tatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaatcagttcctaagttcttctctcttggtcttct 230  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| |||  ||||||||||||| |||||||||||||||||||||||||||||    
T  1952 tatattatgactattgaaagataatcccacccttaccttacaattgcaaagacaaaaagcacagcaaatccgttcctaagttcttctctcttggtcttct 1853  T
Q  231 ctccttgcctttgctt 246  Q
    ||||||||||| ||||    
T  1852 ctccttgccttagctt 1837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 6 - 246
Target Start/End: Original strand, 889 - 1126
Alignment:
Q  6 tactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcgcctaaagaacagt 105  Q
    ||||||||||||||  ||||| ||| |||||| | ||||| || ||||||| |||||||  |||||||||| |||||||||||||  ||  |||||||||    
T  889 tactaatcatcaaac-acaactttataaacctaaatcttacacattttctt-caaaatcgccattaaccctaattttcccaattttaccataagaacagt 986  T
Q  106 tcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaatcagttc 205  Q
    | ||||| ||||||||||||||| ||||||||| |||||||| |||| |||||||||||||||||||||||||||| |||  |||||||||||||| |||    
T  987 taaattgcttaattttcagaaatcatatattatcactattgagagatgatcccacccttaccttagaattgcaaagacaa-aagcacagcaaatcaattc 1085  T
Q  206 ctaagttcttctctcttggtcttctctccttgcctttgctt 246  Q
    ||| |||||||||||||||||||||||||||||||| ||||    
T  1086 ctaggttcttctctcttggtcttctctccttgccttagctt 1126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 9221 - 9396
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcgccta-aag 99  Q
    ||||||||||| ||||||| |||||||  | |||||| ||||||| |||||||||||||||||||||||||||||||| || ||||||||  | |  |||    
T  9221 aatcatactaaacatcaaattacaacacaataaacctaattcttacaccttttctttcaaaatcatcattaacccttaatt-cccaattttacttttaag 9319  T
Q  100 aacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattg 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9320 aacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattg 9396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 99 - 241
Target Start/End: Original strand, 10222 - 10364
Alignment:
Q  99 gaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaa 198  Q
    ||||| |||||||||||||||||||||||||| ||||||||| ||||| ||||||||| ||||||||||||||||||| | || |||  |||||||||||    
T  10222 gaacaattcaattgattaattttcagaaattacatattatgattattggaagataatctcacccttaccttagaattgtagagacaaaaagcacagcaaa 10321  T
Q  199 tcagttcctaagttcttctctcttggtcttctctccttgcctt 241  Q
    || ||||||||||||||||||||||||||||||||||||||||    
T  10322 tccgttcctaagttcttctctcttggtcttctctccttgcctt 10364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 112 - 246
Target Start/End: Complemental strand, 493086 - 492953
Alignment:
Q  112 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaatcagttcctaagt 211  Q
    ||||||||||||||||||||| |||| || ||||||||||||||| ||||||||||||||||||||| || |||  ||||||||||||| ||||||||||    
T  493086 gattaattttcagaaattatacatta-gattattgaaagataatctcacccttaccttagaattgcagagacaaaaagcacagcaaatccgttcctaagt 492988  T
Q  212 tcttctctcttggtcttctctccttgcctttgctt 246  Q
    |||||||||||||||||||||||||||||| ||||    
T  492987 tcttctctcttggtcttctctccttgccttagctt 492953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 116 - 241
Target Start/End: Complemental strand, 10250 - 10125
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaatcagttcctaagttctt 215  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||||||||||||||||||| | || |||  ||||||||||||| ||||||||||||||    
T  10250 aattttcagaaattatagattatgattattgagagatagtcccacccttaccttagaattgtatagacaaaaagcacagcaaatccgttcctaagttctt 10151  T
Q  216 ctctcttggtcttctctccttgcctt 241  Q
    ||||||||||||||||||||||||||    
T  10150 ctctcttggtcttctctccttgcctt 10125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 11111 - 11042
Alignment:
Q  143 attgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaatcagttcctaagtt 212  Q
    |||||| ||||||||||||||||||||||||||  |     ||||| ||||||||||||| |||||||||    
T  11111 attgaaggataatcccacccttaccttagaattttaggaagaattaacacagcaaatcagctcctaagtt 11042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 116 - 241
Target Start/End: Complemental strand, 1580 - 1455
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaatcagttcctaagttctt 215  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||||||||||||||||||| | || |||  ||||||||||||| ||||||||||||||    
T  1580 aattttcagaaattatagattatgattattgagagatagtcccacccttaccttagaattgtatagacaaaaagcacagcaaatccgttcctaagttctt 1481  T
Q  216 ctctcttggtcttctctccttgcctt 241  Q
    ||||||||||||||||||||||||||    
T  1480 ctctcttggtcttctctccttgcctt 1455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1469 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold1469
Description:

Target: scaffold1469; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 1242 - 1420
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcgcctaaaga 100  Q
    ||||||||||||||||||  || ||||||  |||||||| |||||  | ||||||| ||||||||||||||  ||| |||||||||||||  ||| ||||    
T  1242 aatcatactaatcatcaat-tataacattgtaaacctgaatcttacgcattttctt-caaaatcatcattagacctaattttcccaattttaccttaaga 1339  T
Q  101 acagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaag 181  Q
    |||||| ||||| ||||||||||||||  ||||||||  |||||||||||  |||||||||||||||||||||||||||||    
T  1340 acagttaaattgtttaattttcagaaagcatatattaacactattgaaaggaaatcccacccttaccttagaattgcaaag 1420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 16232 - 16023
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcgcctaaaga 100  Q
    ||||||||||||||||||| |||||||| |  ||||||||||||  || ||||||| ||||||||||||||||||| | || || | |||   || || |    
T  16232 aatcatactaatcatcaaa-tacaacatcatgaacctgattcttgcacattttctt-caaaatcatcattaaccctaaatt-ccaatttttatcttaaaa 16136  T
Q  101 acagttcaattgattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaat 199  Q
    |||||| |||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |     ||||| ||||||||||    
T  16135 acagttaaattgattaatttttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgtaggaagaattaacacagcaaat 16036  T
Q  200 cagttcctaagtt 212  Q
    ||| |||||||||    
T  16035 cagctcctaagtt 16023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 112 - 246
Target Start/End: Complemental strand, 3461 - 3327
Alignment:
Q  112 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaatcagttcctaagt 211  Q
    ||||||||||||||||||||||||||     |||||||||||||  |||||||||||||||||||||||| |||  ||||| ||||||| ||||||||||    
T  3461 gattaattttcagaaattatatattaaattcattgaaagataatatcacccttaccttagaattgcaaagacaaaaagcacggcaaatccgttcctaagt 3362  T
Q  212 tcttctctcttggtcttctctccttgcctttgctt 246  Q
    ||| |||||||||||||||||| ||||||| ||||    
T  3361 tctcctctcttggtcttctctcgttgccttagctt 3327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 112 - 246
Target Start/End: Complemental strand, 5916 - 5781
Alignment:
Q  112 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaa--ttagcacagcaaatcagttcctaa 209  Q
    ||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||| |||    | |||||| |||| |||||  |    
T  5916 gattaattttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaagaaaacacagc-aatcggttcccta 5818  T
Q  210 gttcttctctcttggtcttctctccttgcctttgctt 246  Q
    |||||||||||||||||||||||||||||||| ||||    
T  5817 gttcttctctcttggtcttctctccttgccttagctt 5781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 69; Significance: 5e-31; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 91372 - 91144
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcg---cctaa 97  Q
    ||||||| ||||||||||| |||||||||| |||||| | ||||| || ||||||| ||||||   |||||||||| |||| ||||||||     ||  |    
T  91372 aatcatattaatcatcaaa-tacaacattataaacctaaatcttacacattttctt-caaaattgccattaaccctaattt-cccaatttttttaccata 91276  T
Q  98 agaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaa 197  Q
    | ||||||| ||||| ||||||||||||||| ||||||||| | ||||||||||| ||||||||||||||||||||||||||||  ||  ||  ||||||    
T  91275 aaaacagttaaattgcttaattttcagaaatcatatattatcattattgaaagatgatcccacccttaccttagaattgcaaagataa--agtgcagcaa 91178  T
Q  198 atcagttcctaagttcttctctcttggtcttctc 231  Q
    | || || ||||| ||||||||||||||||||||    
T  91177 accaatttctaagctcttctctcttggtcttctc 91144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 97098 - 96870
Alignment:
Q  1 aatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttcg---cctaa 97  Q
    ||||||| ||||||||||| |||||||||| |||||| | ||||| || ||||||| ||||||   |||||||||| |||| ||||||||     ||  |    
T  97098 aatcatattaatcatcaaa-tacaacattataaacctaaatcttacacattttctt-caaaattgccattaaccctaattt-cccaatttttttaccata 97002  T
Q  98 agaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaa 197  Q
    | ||||||| ||||| ||||||||||||||| ||||||||| | ||||||||||| ||||||||||||||||||||||||||||  ||  ||  ||||||    
T  97001 aaaacagttaaattgcttaattttcagaaatcatatattatcattattgaaagatgatcccacccttaccttagaattgcaaagataa--agtgcagcaa 96904  T
Q  198 atcagttcctaagttcttctctcttggtcttctc 231  Q
    | || || ||||| ||||||||||||||||||||    
T  96903 accaatttctaagctcttctctcttggtcttctc 96870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 171
Target Start/End: Original strand, 111885 - 111938
Alignment:
Q  118 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 171  Q
    ||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  111885 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 111938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 118 - 240
Target Start/End: Original strand, 6 - 125
Alignment:
Q  118 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaatcagttcctaagttcttct 217  Q
    ||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||  ||  ||  |||||| ||| |||||||| ||||||    
T  6 ttttcagaaatcatatattagaactattgaaagataatcccacccttaccttagaattgcaaagataa--agtgcagcaagtcaattcctaagctcttct 103  T
Q  218 ctcttggtcttctctccttgcct 240  Q
    |||||||||||||| ||||||||    
T  104 ctcttggtcttctc-ccttgcct 125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 118 - 181
Target Start/End: Complemental strand, 13947 - 13884
Alignment:
Q  118 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaag 181  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||    
T  13947 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaag 13884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 23628 - 23562
Alignment:
Q  112 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 178  Q
    ||||||||||||||||||||| |||||||  ||| ||||||||||||||||||||||||||||||||    
T  23628 gattaattttcagaaattatacattatgatcattcaaagataatcccacccttaccttagaattgca 23562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 116 - 246
Target Start/End: Original strand, 111686 - 111817
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaa--ttagcacagcaaatcagttcctaagttc 213  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||||||||| ||| |||    | |||||| ||||  |||   |||||    
T  111686 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgcgaagacaaagaaaacacagc-aatcgattctctagttc 111784  T
Q  214 ttctctcttggtcttctctccttgcctttgctt 246  Q
    |||||||||||||||||||||||||||| ||||    
T  111785 ttctctcttggtcttctctccttgccttagctt 111817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 171
Target Start/End: Complemental strand, 11905 - 11850
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 171  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  11905 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 11850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 175
Target Start/End: Complemental strand, 10609 - 10546
Alignment:
Q  112 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaatt 175  Q
    ||||||||||||||||||||| |||| ||  |||||||||||||||||| ||||||||||||||    
T  10609 gattaattttcagaaattatacattaagatcattgaaagataatcccacacttaccttagaatt 10546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 112 - 178
Target Start/End: Original strand, 73281 - 73347
Alignment:
Q  112 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 178  Q
    |||||||||||| |||||||| |||||||  |||||||||||||||||||||||||| | |||||||    
T  73281 gattaattttcataaattatacattatgatcattgaaagataatcccacccttacctcataattgca 73347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 171
Target Start/End: Original strand, 717 - 770
Alignment:
Q  118 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 171  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||||||||||    
T  717 ttttcagaaattatatattaagatcattgaaagataatcccacccttaccttag 770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 170
Target Start/End: Original strand, 16801 - 16875
Alignment:
Q  97 aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 170  Q
    ||||||| ||||||| ||| ||||||||||||||||||| ||||| |||||| ||||| || |||||||||||||    
T  16801 aagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 16875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 40586 - 40524
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 178  Q
    ||||||||||||||||||| ||||| |||||| ||||| || ||||||||||||||| |||||    
T  40586 aattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgca 40524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 170
Target Start/End: Original strand, 116877 - 116951
Alignment:
Q  97 aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 170  Q
    ||||||| ||||||| ||| ||||||||||||||||||| ||||| |||||| ||||| || |||||||||||||    
T  116877 aagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 116951  T

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Target: scaffold0019 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 135474 - 135530
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttaga 172  Q
    ||||||||||||||||||| ||||| |||||| ||||| || |||||||||||||||    
T  135474 aattttcagaaattatatactatgattattgagagatagtctcacccttaccttaga 135530  T

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Target: scaffold0924 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 171
Target Start/End: Complemental strand, 805 - 750
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 171  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  805 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 750  T

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Target: scaffold0247 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 171
Target Start/End: Original strand, 11342 - 11397
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 171  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  11342 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 11397  T

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Target: scaffold0235 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 228
Target Start/End: Complemental strand, 22646 - 22536
Alignment:
Q  117 attttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaat-tagcacagc-aaatcagttcctaagttct 214  Q
    |||||||||||||||||| ||||| |||||| ||||| || |||||||||||| || |||||   | ||| | ||||||| ||||| ||||||| | |||    
T  22646 attttcagaaattatatactatgattattgagagatagtctcacccttaccttggatttgca---gaaatattgcacagcaaaatcggttcctaggctct 22550  T
Q  215 tctctcttggtctt 228  Q
    ||||||||||||||    
T  22549 tctctcttggtctt 22536  T

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Target: scaffold0154 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 171
Target Start/End: Original strand, 30858 - 30913
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 171  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  30858 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 30913  T

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Target: scaffold0461 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 170
Target Start/End: Complemental strand, 82 - 8
Alignment:
Q  97 aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 170  Q
    ||||||| ||||||| ||| |||||||||||||||| ||||| || |||||| ||||| || |||||||||||||    
T  82 aagaacaattcaattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 8  T

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Target: scaffold0146 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 170
Target Start/End: Original strand, 13613 - 13687
Alignment:
Q  97 aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 170  Q
    ||||||| ||||||| ||| |||||||||||||||| ||||| || |||||| ||||| || |||||||||||||    
T  13613 aagaacaattcaattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 13687  T

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Target: scaffold0129 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 246
Target Start/End: Complemental strand, 45326 - 45198
Alignment:
Q  119 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaa--ttagcacagcaaatcagttcctaagttcttc 216  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||| |||| ||| |||    | |||||| ||||  |||   ||||||||    
T  45326 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagatttgcgaagacaaagaaaacacagc-aatcgattctctagttcttc 45228  T
Q  217 tctcttggtcttctctccttgcctttgctt 246  Q
    ||||||||||||||||||| ||||| ||||    
T  45227 tctcttggtcttctctcctagccttagctt 45198  T

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Target: scaffold0020 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 170
Target Start/End: Complemental strand, 102002 - 101928
Alignment:
Q  97 aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 170  Q
    ||||||| ||||||| ||| ||||||||| ||||||||| ||||| |||||| ||||| || |||||||||||||    
T  102002 aagaacaattcaattagatcaattttcaggaattatatactatgattattgagagatagtctcacccttacctta 101928  T

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Target: scaffold0310 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 17644 - 17700
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttaga 172  Q
    ||||||||||||||||| ||||||  |||||| ||||| || |||||||||||||||    
T  17644 aattttcagaaattatacattatggttattgagagatagtctcacccttaccttaga 17700  T

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Target: scaffold0025 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 14450 - 14398
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 168  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||    
T  14450 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 14398  T

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Target: scaffold0456 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 171
Target Start/End: Original strand, 932 - 987
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 171  Q
    |||||||||||| |||| ||||||| |||||| ||||| || ||||||||||||||    
T  932 aattttcagaaactatagattatgattattgagagatagtctcacccttaccttag 987  T

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Target: scaffold0456; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 171
Target Start/End: Original strand, 8077 - 8132
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 171  Q
    |||||||||||| |||| ||||||| |||||| ||||| || ||||||||||||||    
T  8077 aattttcagaaactatagattatgattattgagagatagtctcacccttaccttag 8132  T

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Target: scaffold0090 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 171
Target Start/End: Original strand, 18170 - 18225
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 171  Q
    |||||||| |||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  18170 aattttcaaaaattatagattatgattattgagagatagtctcacccttaccttag 18225  T

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Target: scaffold1461 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1461
Description:

Target: scaffold1461; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 170
Target Start/End: Complemental strand, 1543 - 1485
Alignment:
Q  112 gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 170  Q
    ||||||||||||||||||  |||||| ||  |||| ||||||||| |||||||||||||    
T  1543 gattaattttcagaaattgcatattaagatcattgcaagataatctcacccttacctta 1485  T

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Target: scaffold0317 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 1387 - 1441
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 170  Q
    |||||||| ||||||||||| ||||  ||||||||||| || |||||||||||||    
T  1387 aattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 1441  T

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Target: scaffold0124 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 34330 - 34276
Alignment:
Q  116 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 170  Q
    ||||||||||||||||||| ||||| ||| || ||||| || |||||||||||||    
T  34330 aattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 34276  T

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Target: scaffold1773 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 180
Target Start/End: Original strand, 1181 - 1242
Alignment:
Q  119 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaa 180  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||  |||||||    
T  1181 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcaaa 1242  T

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Target: scaffold0796 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 212
Target Start/End: Complemental strand, 1784 - 1691
Alignment:
Q  119 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaatcagttcctaagtt 212  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||  ||| |     ||||| ||||||||||||| |||||||||    
T  1784 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgtaggaagaattaacacagcaaatcagctcctaagtt 1691  T

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Target: scaffold0796; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 212
Target Start/End: Complemental strand, 5807 - 5714
Alignment:
Q  119 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaaggcaattagcacagcaaatcagttcctaagtt 212  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||  ||| |     ||||| ||||||||||||| |||||||||    
T  5807 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgtaggaagaattaacacagcaaatcagctcctaagtt 5714  T

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Target: scaffold0117 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 1950 - 1897
Alignment:
Q  118 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 171  Q
    ||||||||||||||| ||||||| |||||| | ||| || ||||||||||||||    
T  1950 ttttcagaaattatagattatgattattgagatatagtctcacccttaccttag 1897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 8627 - 8574
Alignment:
Q  118 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 171  Q
    ||||||||||||||| ||||||| |||||| | ||| || ||||||||||||||    
T  8627 ttttcagaaattatagattatgattattgagatatagtctcacccttaccttag 8574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 12967 - 13019
Alignment:
Q  118 ttttcagaaattatatattatgactattg-aaagataatcccacccttacctt 169  Q
    |||| |||||| ||||||||  ||||||| |||||||||||||||||||||||    
T  12967 tttttagaaatcatatattagaactattgtaaagataatcccacccttacctt 13019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 294 - 346
Alignment:
Q  119 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 171  Q
    |||||||||||||| ||||||  |||||| ||||| || ||||||||||||||    
T  294 tttcagaaattatagattatggttattgagagatagtctcacccttaccttag 346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 50182 - 50234
Alignment:
Q  119 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 171  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  50182 tttcaggaattatagattatgattattgagagatagtctcacccttaccttag 50234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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