View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0755_high_65 (Length: 248)
Name: NF0755_high_65
Description: NF0755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0755_high_65 |
 | |
|
| [»] chr5 (10 HSPs) |
| |
|
| [»] chr6 (4 HSPs) |
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| [»] chr4 (8 HSPs) |
| |
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| [»] scaffold0040 (2 HSPs) |
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| [»] chr7 (4 HSPs) |
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| [»] scaffold0233 (1 HSPs) |
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| [»] scaffold0028 (2 HSPs) |
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| [»] scaffold0482 (1 HSPs) |
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| [»] chr8 (1 HSPs) |
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| [»] chr3 (8 HSPs) |
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| [»] scaffold0001 (1 HSPs) |
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| [»] chr2 (3 HSPs) |
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| [»] chr1 (2 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 193; Significance: 1e-105; HSPs: 10)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 20 - 248
Target Start/End: Original strand, 22488666 - 22488894
Alignment:
| Q |
20 |
gacatcatcaacattgggcaacaagttatacagctcactacaactggttatctcatgcgcaagcaagcaacagtgctttcaaagccaggcaaatcagaaa |
119 |
Q |
| |
|
|||||||||| |||| |||| |||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22488666 |
gacatcatcagcattaggcagcaagttatacagctcattacagctggttatctcatgtgcaagcaagcaacagtgctttcaaagccaggcaaatcagaaa |
22488765 |
T |
|
| Q |
120 |
gaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgcgtccaacagctctattttctt |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
22488766 |
gaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacagctctattttctc |
22488865 |
T |
|
| Q |
220 |
cctttatcaccaagacactcctcacctat |
248 |
Q |
| |
|
|||| |||||||||||||||||||||||| |
|
|
| T |
22488866 |
ccttgatcaccaagacactcctcacctat |
22488894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 20 - 248
Target Start/End: Original strand, 24412307 - 24412536
Alignment:
| Q |
20 |
gacatcatcaacattgggcaacaagttatacagctcactacaactggttatctcatgcgcaagcaa-gcaacagtgctttcaaagccaggcaaatcagaa |
118 |
Q |
| |
|
|||||||||| | ||||| |||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||| |
|
|
| T |
24412307 |
gacatcatcagaagtgggctgcaagttatacagctcatcacagctggttatctcatgcgcaagcaaagcaacagtgctttctaagtcaggcaaatcagaa |
24412406 |
T |
|
| Q |
119 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgcgtccaacagctctattttct |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
24412407 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacagctctattttct |
24412506 |
T |
|
| Q |
219 |
tcctttatcaccaagacactcctcacctat |
248 |
Q |
| |
|
|||| ||||||||||||||||||||||| |
|
|
| T |
24412507 |
cccttggtcaccaagacactcctcacctat |
24412536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 20 - 248
Target Start/End: Complemental strand, 30445538 - 30445309
Alignment:
| Q |
20 |
gacatcatcaacattgggcaacaagttatacagctcactacaactggttatctcatgcgcaagcaa-gcaacagtgctttcaaagccaggcaaatcagaa |
118 |
Q |
| |
|
|||||||||| | ||||| |||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |
|
|
| T |
30445538 |
gacatcatcagaagtgggctgcaagttatacagctcattacagctggttatctcatgcgcaagcaaagcaacagtgctttcaaagtcaggcaaatcagaa |
30445439 |
T |
|
| Q |
119 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgcgtccaacagctctattttct |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
30445438 |
agaacattctgagaacgttctggctatttttaagaagaaaagagaaatcaaatgagactttggacagctatcaaaaacgtgtccaacagctctattttct |
30445339 |
T |
|
| Q |
219 |
tcctttatcaccaagacactcctcacctat |
248 |
Q |
| |
|
|||| ||||||||||||||||||||||| |
|
|
| T |
30445338 |
cccttggtcaccaagacactcctcacctat |
30445309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 20 - 248
Target Start/End: Complemental strand, 30454910 - 30454681
Alignment:
| Q |
20 |
gacatcatcaacattgggcaacaagttatacagctcactacaactggttatctcatgcgcaagcaa-gcaacagtgctttcaaagccaggcaaatcagaa |
118 |
Q |
| |
|
|||||||||| | ||||| |||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |
|
|
| T |
30454910 |
gacatcatcagaagtgggctgcaagttatacagctcattacagctggttatctcatgcgcaagcaaagcaacagtgctttcaaagtcaggcaaatcagaa |
30454811 |
T |
|
| Q |
119 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgcgtccaacagctctattttct |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
30454810 |
agaacattctgagaacgttctggctatttttaagaagaaaagagaaatcaaatgagactttggacagctatcaaaaacgtgtccaacagctctattttct |
30454711 |
T |
|
| Q |
219 |
tcctttatcaccaagacactcctcacctat |
248 |
Q |
| |
|
|||| ||||||||||||||||||||||| |
|
|
| T |
30454710 |
cccttggtcaccaagacactcctcacctat |
30454681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 20 - 248
Target Start/End: Complemental strand, 30459968 - 30459739
Alignment:
| Q |
20 |
gacatcatcaacattgggcaacaagttatacagctcactacaactggttatctcatgcgcaagcaa-gcaacagtgctttcaaagccaggcaaatcagaa |
118 |
Q |
| |
|
|||||||||| | ||||| |||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |
|
|
| T |
30459968 |
gacatcatcagaagtgggctgcaagttatacagctcattacagctggttatctcatgcgcaagcaaagcaacagtgctttcaaagtcaggcaaatcagaa |
30459869 |
T |
|
| Q |
119 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgcgtccaacagctctattttct |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
30459868 |
agaacattctgagaacgttctggctatttttaagaagaaaagagaaatcaaatgagactttggacagctatcaaaaacgtgtccaacagctctattttct |
30459769 |
T |
|
| Q |
219 |
tcctttatcaccaagacactcctcacctat |
248 |
Q |
| |
|
|||| ||||||||||||||||||||||| |
|
|
| T |
30459768 |
cccttggtcaccaagacactcctcacctat |
30459739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 20 - 248
Target Start/End: Original strand, 4635442 - 4635670
Alignment:
| Q |
20 |
gacatcatcaacattgggcaacaagttatacagctcactacaactggttatctcatgcgcaagcaagcaacagtgctttcaaagccaggcaaatcagaaa |
119 |
Q |
| |
|
|||||||||| || || ||||||||||||||| |||| ||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
4635442 |
gacatcatcagcagtgcgcaacaagttatacaactcattacaactggttctctcacgcgcaagcaagcaatagtgctttcaaagccaggcaaatcagaaa |
4635541 |
T |
|
| Q |
120 |
gaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgcgtccaacagctctattttctt |
219 |
Q |
| |
|
||||||| ||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |
|
|
| T |
4635542 |
gaacattttgagaacattctagctattttaaagaagaaaagaaaaatcaattgagactttggacaactatcaaaaacgcatccaacagctctattttctc |
4635641 |
T |
|
| Q |
220 |
cctttatcaccaagacactcctcacctat |
248 |
Q |
| |
|
|||| |||||||||||||||||||||||| |
|
|
| T |
4635642 |
ccttgatcaccaagacactcctcacctat |
4635670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 41 - 248
Target Start/End: Original strand, 18568538 - 18568746
Alignment:
| Q |
41 |
caagttatacagctcactacaactggttatctcatgcgcaagcaa-gcaacagtgctttcaaagccaggcaaatcagaaagaacattctgagaacgttct |
139 |
Q |
| |
|
||||||| |||||||| |||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
18568538 |
caagttacacagctcattacagctggttatctcatgcgcaagcaaagcaacagtgctttcaaagtcaggcaaatcagaaagaacattctgagaacgttct |
18568637 |
T |
|
| Q |
140 |
ggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgcgtccaacagctctattttcttcctttatcaccaagacactc |
239 |
Q |
| |
|
||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||| |
|
|
| T |
18568638 |
ggctatttttaagaagaaaagagaaatcaaatgagactttggacagctatcaaaaacgtgtccaacagctctattttctcccttggtcaccaagacactc |
18568737 |
T |
|
| Q |
240 |
ctcacctat |
248 |
Q |
| |
|
||||||||| |
|
|
| T |
18568738 |
ctcacctat |
18568746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 20 - 248
Target Start/End: Original strand, 24421767 - 24421985
Alignment:
| Q |
20 |
gacatcatcaacattgggcaacaagttatacagctcactacaactggttatctcatgcgcaagcaa-gcaacagtgctttcaaagccaggcaaatcagaa |
118 |
Q |
| |
|
|||||||||| | ||||| |||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||| |
|
|
| T |
24421767 |
gacatcatcagaagtgggctgcaagttatacagctcatcacagctggttatctcatgcgcaagcaaagcaacagtgctttctaagtcaggcaaatcagaa |
24421866 |
T |
|
| Q |
119 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgcgtccaacagctctattttct |
218 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
24421867 |
agaacattct-----------ggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccagcagctctattttct |
24421955 |
T |
|
| Q |
219 |
tcctttatcaccaagacactcctcacctat |
248 |
Q |
| |
|
|||| ||||||||||||||||||||||| |
|
|
| T |
24421956 |
cccttggtcaccaagacactcctcacctat |
24421985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 31 - 218
Target Start/End: Complemental strand, 24279004 - 24278817
Alignment:
| Q |
31 |
cattgggcaacaagttatacagctcactacaactggttatctcatgcgcaagcaagcaacagtgctttcaaagccaggcaaatcagaaagaacattctga |
130 |
Q |
| |
|
||||||||||||||| | |||| ||| |||||||||| |||||||| ||||||||||||| ||| ||||| |||||||||||| | |||||| ||| |
|
|
| T |
24279004 |
cattgggcaacaagtaa-acagttcattacaactggtactctcatgcacaagcaagcaacaatgcaagcaaagttaggcaaatcagacacaacatt-tga |
24278907 |
T |
|
| Q |
131 |
gaacgttctggctatttt-aaagaagaaaagagaaatcaattgagactttggacagctatca-aaaacgcgtccaacagctctattttct |
218 |
Q |
| |
|
|||||||||||||||||| ||||||||| ||||||||||| ||||| ||||||||||||||| |||||| |||||||| ||||||||||| |
|
|
| T |
24278906 |
gaacgttctggctatttttaaagaagaagagagaaatcaactgagattttggacagctatcaaaaaacgtgtccaacaactctattttct |
24278817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 31 - 218
Target Start/End: Original strand, 24383210 - 24383397
Alignment:
| Q |
31 |
cattgggcaacaagttatacagctcactacaactggttatctcatgcgcaagcaagcaacagtgctttcaaagccaggcaaatcagaaagaacattctga |
130 |
Q |
| |
|
||||||||||||||| | |||| ||| |||||||||| |||||||| ||||||||||||| ||| ||||| |||||||||||| | |||||| ||| |
|
|
| T |
24383210 |
cattgggcaacaagtaa-acagttcattacaactggtactctcatgcacaagcaagcaacaatgcaagcaaagttaggcaaatcagacacaacatt-tga |
24383307 |
T |
|
| Q |
131 |
gaacgttctggctatttt-aaagaagaaaagagaaatcaattgagactttggacagctatc-aaaaacgcgtccaacagctctattttct |
218 |
Q |
| |
|
|||||||||||||||||| ||||||||| ||||||||||| ||||| |||||||||||||| ||||||| |||||||| ||||||||||| |
|
|
| T |
24383308 |
gaacgttctggctatttttaaagaagaagagagaaatcaactgagattttggacagctatcaaaaaacgtgtccaacaactctattttct |
24383397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 182; Significance: 2e-98; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 20 - 248
Target Start/End: Complemental strand, 23896325 - 23896096
Alignment:
| Q |
20 |
gacatcatcaacattgggcaacaagttatacagctcactacaactggttatctcatgcgcaagcaa-gcaacagtgctttcaaagccaggcaaatcagaa |
118 |
Q |
| |
|
|||||||||| | |||||| |||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
23896325 |
gacatcatcagaagtgggcagcaagttatacagctcattacagctggttatctcatgcgcaagcaaagcaacagtgctttcaaagccaggcaaatcagaa |
23896226 |
T |
|
| Q |
119 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgcgtccaacagctctattttct |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |
|
|
| T |
23896225 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacaactatcaaaaacgtgtccaacagctctattttct |
23896126 |
T |
|
| Q |
219 |
tcctttatcaccaagacactcctcacctat |
248 |
Q |
| |
|
|||| |||||||||||||||||||||||| |
|
|
| T |
23896125 |
cccttgatcaccaagacactcctcacctat |
23896096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 20 - 248
Target Start/End: Original strand, 18420031 - 18420260
Alignment:
| Q |
20 |
gacatcatcaacattgggcaacaagttatacagctcactacaactggttatctcatgcgcaagcaa-gcaacagtgctttcaaagccaggcaaatcagaa |
118 |
Q |
| |
|
|||||||||| | ||||| |||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||| |
|
|
| T |
18420031 |
gacatcatcagaagtgggctgcaagttatacagctcatcacagctggttatctcatgcgcaagcaaagcaacagtgctttctaagtcaggcaaatcagaa |
18420130 |
T |
|
| Q |
119 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgcgtccaacagctctattttct |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
18420131 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacagctctattttct |
18420230 |
T |
|
| Q |
219 |
tcctttatcaccaagacactcctcacctat |
248 |
Q |
| |
|
|||| ||||||||||||||||||||||| |
|
|
| T |
18420231 |
cccttggtcaccaagacactcctcacctat |
18420260 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 119 - 248
Target Start/End: Original strand, 14101770 - 14101899
Alignment:
| Q |
119 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgcgtccaacagctctattttct |
218 |
Q |
| |
|
||||||||||||||||||||| | |||||| ||||||||| |||||||||||| |||||||||||| |||||||| ||||||| |||||||||| |
|
|
| T |
14101770 |
agaacattctgagaacgttcttcccgttttaatgaagaaaagtgaaatcaattgaagctttggacagctgccaaaaacgtatccaacaactctattttca |
14101869 |
T |
|
| Q |
219 |
tcctttatcaccaagacactcctcacctat |
248 |
Q |
| |
|
||| ||||||||| |||||||||||||| |
|
|
| T |
14101870 |
ctcttgatcaccaaggcactcctcacctat |
14101899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 150 - 240
Target Start/End: Original strand, 12173040 - 12173129
Alignment:
| Q |
150 |
aagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgcgtccaacagctctattttcttcctttatcaccaagacactcc |
240 |
Q |
| |
|
||||||||||| |||||||||||| |||||||| | |||| ||||| | | |||||| |||||||||| | ||||||||||| ||||||| |
|
|
| T |
12173040 |
aagaagaaaagtgaaatcaattgaaactttggatatctat-aaaaatgtgcccaacaactctattttcatagtttatcaccaacacactcc |
12173129 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 181; Significance: 7e-98; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 20 - 248
Target Start/End: Complemental strand, 15843605 - 15843377
Alignment:
| Q |
20 |
gacatcatcaacattgggcaacaagttatacagctcactacaactggttatctcatgcgcaagcaagcaacagtgctttcaaagccaggcaaatcagaaa |
119 |
Q |
| |
|
|||||||||| ||||||||| ||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15843605 |
gacatcatcagcattgggcagcaaattatacagctcattacagctggttatctcatgcgcaagcaagcaacagtgctttcaaagccaggcaaatcagaaa |
15843506 |
T |
|
| Q |
120 |
gaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgcgtccaacagctctattttctt |
219 |
Q |
| |
|
||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||| |
|
|
| T |
15843505 |
gaacattatgagaacgttatggctattttaaagaagaaaagagaaatcaattgagactttgaacagctataaaaaacgtgtccaacagctctattttctc |
15843406 |
T |
|
| Q |
220 |
cctttatcaccaagacactcctcacctat |
248 |
Q |
| |
|
|||| |||||||||||||||||||||||| |
|
|
| T |
15843405 |
ccttgatcaccaagacactcctcacctat |
15843377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 20 - 248
Target Start/End: Original strand, 37058566 - 37058795
Alignment:
| Q |
20 |
gacatcatcaacattgggcaacaagttatacagctcactacaactggttatctcatgcgcaagcaag-caacagtgctttcaaagccaggcaaatcagaa |
118 |
Q |
| |
|
|||||||||| | |||||| ||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
37058566 |
gacatcatcagaagtgggcacaaagttatacagctcattacagctggttatctcatgcgcaagcaaaacaacagtgctttcaaagccaggcaaatcagaa |
37058665 |
T |
|
| Q |
119 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgcgtccaacagctctattttct |
218 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
37058666 |
agaacattttgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacaactctattttct |
37058765 |
T |
|
| Q |
219 |
tcctttatcaccaagacactcctcacctat |
248 |
Q |
| |
|
|||| |||||||||||||||||||||||| |
|
|
| T |
37058766 |
cccttgatcaccaagacactcctcacctat |
37058795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 20 - 248
Target Start/End: Complemental strand, 3242996 - 3242767
Alignment:
| Q |
20 |
gacatcatcaacattgggcaacaagttatacagctcactacaactggttatctcatgcgcaagcaa-gcaacagtgctttcaaagccaggcaaatcagaa |
118 |
Q |
| |
|
|||||||||| | ||||| |||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||| |
|
|
| T |
3242996 |
gacatcatcagaagtgggctgcaagttatacagctcatcacagctggttatctcatgcgcaagcaaagcaacagtgctttctaagtcaggcaaatcagaa |
3242897 |
T |
|
| Q |
119 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgcgtccaacagctctattttct |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
3242896 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacagctctattttct |
3242797 |
T |
|
| Q |
219 |
tcctttatcaccaagacactcctcacctat |
248 |
Q |
| |
|
|||| ||||||||||||||||||||||| |
|
|
| T |
3242796 |
cccttggtcaccaagacactcctcacctat |
3242767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 20 - 248
Target Start/End: Original strand, 3917545 - 3917774
Alignment:
| Q |
20 |
gacatcatcaacattgggcaacaagttatacagctcactacaactggttatctcatgcgcaagcaa-gcaacagtgctttcaaagccaggcaaatcagaa |
118 |
Q |
| |
|
|||||||||| | ||||| |||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||| |
|
|
| T |
3917545 |
gacatcatcagaagtgggctgcaagttatacagctcatcacagctggttatctcatgcgcaagcaaagcaacagtgctttctaagtcaggcaaatcagaa |
3917644 |
T |
|
| Q |
119 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgcgtccaacagctctattttct |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
3917645 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacagctctattttct |
3917744 |
T |
|
| Q |
219 |
tcctttatcaccaagacactcctcacctat |
248 |
Q |
| |
|
|||| ||||||||||||||||||||||| |
|
|
| T |
3917745 |
cccttggtcaccaagacactcctcacctat |
3917774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 20 - 248
Target Start/End: Original strand, 26811987 - 26812216
Alignment:
| Q |
20 |
gacatcatcaacattgggcaacaagttatacagctcactacaactggttatctcatgcgcaagcaa-gcaacagtgctttcaaagccaggcaaatcagaa |
118 |
Q |
| |
|
|||||||||| | ||||| |||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||| |
|
|
| T |
26811987 |
gacatcatcagaagtgggctgcaagttatacagctcatcacagctggttatctcatgcgcaagcaaagcaacagtgctttctaagtcaggcaaatcagaa |
26812086 |
T |
|
| Q |
119 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgcgtccaacagctctattttct |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
26812087 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacagctctattttct |
26812186 |
T |
|
| Q |
219 |
tcctttatcaccaagacactcctcacctat |
248 |
Q |
| |
|
|||| ||||||||||||||||||||||| |
|
|
| T |
26812187 |
cccttggtcaccaagacactcctcacctat |
26812216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 20 - 248
Target Start/End: Original strand, 26821454 - 26821683
Alignment:
| Q |
20 |
gacatcatcaacattgggcaacaagttatacagctcactacaactggttatctcatgcgcaagcaa-gcaacagtgctttcaaagccaggcaaatcagaa |
118 |
Q |
| |
|
|||||||||| | ||||| |||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||| |
|
|
| T |
26821454 |
gacatcatcagaagtgggctgcaagttatacagctcatcacagctggttatctcatgcgcaagcaaagcaacagtgctttctaagtcaggcaaatcagaa |
26821553 |
T |
|
| Q |
119 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgcgtccaacagctctattttct |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
26821554 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacagctctattttct |
26821653 |
T |
|
| Q |
219 |
tcctttatcaccaagacactcctcacctat |
248 |
Q |
| |
|
|||| ||||||||||||||||||||||| |
|
|
| T |
26821654 |
cccttggtcaccaagacactcctcacctat |
26821683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 20 - 248
Target Start/End: Complemental strand, 54690622 - 54690393
Alignment:
| Q |
20 |
gacatcatcaacattgggcaacaagttatacagctcactacaactggttatctcatgcgcaagcaa-gcaacagtgctttcaaagccaggcaaatcagaa |
118 |
Q |
| |
|
|||||||||| | ||||| |||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||| |
|
|
| T |
54690622 |
gacatcatcagaagtgggctgcaagttatacagctcatcacagctggttatctcatgcgcaagcaaagcaacagtgctttctaagtcaggcaaatcagaa |
54690523 |
T |
|
| Q |
119 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgcgtccaacagctctattttct |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
54690522 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacagctctattttct |
54690423 |
T |
|
| Q |
219 |
tcctttatcaccaagacactcctcacctat |
248 |
Q |
| |
|
|||| ||||||||||||||||||||||| |
|
|
| T |
54690422 |
cccttggtcaccaagacactcctcacctat |
54690393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 20 - 248
Target Start/End: Complemental strand, 54700053 - 54699824
Alignment:
| Q |
20 |
gacatcatcaacattgggcaacaagttatacagctcactacaactggttatctcatgcgcaagcaa-gcaacagtgctttcaaagccaggcaaatcagaa |
118 |
Q |
| |
|
|||||||||| | ||||| |||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||| |
|
|
| T |
54700053 |
gacatcatcagaagtgggctgcaagttatacagctcatcacagctggttatctcatgcgcaagcaaagcaacagtgctttctaagtcaggcaaatcagaa |
54699954 |
T |
|
| Q |
119 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgcgtccaacagctctattttct |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
54699953 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacagctctattttct |
54699854 |
T |
|
| Q |
219 |
tcctttatcaccaagacactcctcacctat |
248 |
Q |
| |
|
|||| ||||||||||||||||||||||| |
|
|
| T |
54699853 |
cccttggtcaccaagacactcctcacctat |
54699824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0040 (Bit Score: 178; Significance: 4e-96; HSPs: 2)
Name: scaffold0040
Description:
Target: scaffold0040; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 20 - 248
Target Start/End: Complemental strand, 31516 - 31287
Alignment:
| Q |
20 |
gacatcatcaacattgggcaacaagttatacagctcactacaactggttatctcatgcgcaagcaa-gcaacagtgctttcaaagccaggcaaatcagaa |
118 |
Q |
| |
|
|||||||||| | |||||| |||||||||||||||| |||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
31516 |
gacatcatcagaagtgggcagcaagttatacagctcattacagctggttatctcatgtgcaagcaaagcaacagtgctttcaaagccaggcaaatcagaa |
31417 |
T |
|
| Q |
119 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgcgtccaacagctctattttct |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
31416 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacagctctattttct |
31317 |
T |
|
| Q |
219 |
tcctttatcaccaagacactcctcacctat |
248 |
Q |
| |
|
|||| ||||||||||||||||||||||| |
|
|
| T |
31316 |
cccttgttcaccaagacactcctcacctat |
31287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0040; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 29 - 248
Target Start/End: Original strand, 9535 - 9754
Alignment:
| Q |
29 |
aacattgggcaacaagttatacagctcactacaactggttatctcatgcgcaagcaagcaacagtgctttcaaagccaggcaaatcagaaagaacattct |
128 |
Q |
| |
|
||||||| ||||||| ||| ||| |||| || | |||||| | ||| |||||||||||||||| || |||||| |||||||||||| |||||||||| |
|
|
| T |
9535 |
aacattgagcaacaatttaaacaactcattatagctggttctttcactcgcaagcaagcaacagagcaagcaaagctaggcaaatcagacagaacattct |
9634 |
T |
|
| Q |
129 |
gagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgcgtccaacagctctattttcttcctttatca |
228 |
Q |
| |
|
||||||||||| |||||||| ||||||||||| |||| ||| ||||||||||||||||||||||||| | ||||| || |||||||||| |||| |||| |
|
|
| T |
9635 |
gagaacgttctagctatttttaagaagaaaagtgaaaacaaatgagactttggacagctatcaaaaatgtgtccatcaactctattttcacccttgatca |
9734 |
T |
|
| Q |
229 |
ccaagacactcctcacctat |
248 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
9735 |
ccaagacactcctcacctat |
9754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 178; Significance: 4e-96; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 20 - 248
Target Start/End: Complemental strand, 4119133 - 4118904
Alignment:
| Q |
20 |
gacatcatcaacattgggcaacaagttatacagctcactacaactggttatctcatgcgcaagcaa-gcaacagtgctttcaaagccaggcaaatcagaa |
118 |
Q |
| |
|
|||||||||| | || |||||||||||||||||||| || | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
4119133 |
gacatcatcagaagtgagcaacaagttatacagctcattaaagctggttatctcatgcgcaagcaaagcaacagtgctttcaaagccaggcaaatcagaa |
4119034 |
T |
|
| Q |
119 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgcgtccaacagctctattttct |
218 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
4119033 |
agaacattctgagaacgttttggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacagctctattttct |
4118934 |
T |
|
| Q |
219 |
tcctttatcaccaagacactcctcacctat |
248 |
Q |
| |
|
|||| |||||||||||||||||||||||| |
|
|
| T |
4118933 |
cccttgatcaccaagacactcctcacctat |
4118904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 20 - 248
Target Start/End: Original strand, 15172798 - 15173027
Alignment:
| Q |
20 |
gacatcatcaacattgggcaacaagttatacagctcactacaactggttatctcatgcgcaagcaa-gcaacagtgctttcaaagccaggcaaatcagaa |
118 |
Q |
| |
|
|||||||||| | || ||| |||||||||||||||| || | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
15172798 |
gacatcatcagaagtgagcagcaagttatacagctcattatagctggttatctcatgcgcaagcaaagcaacagtgctttcaaagccaggcaaatcagaa |
15172897 |
T |
|
| Q |
119 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgcgtccaacagctctattttct |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
15172898 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacagctctattttct |
15172997 |
T |
|
| Q |
219 |
tcctttatcaccaagacactcctcacctat |
248 |
Q |
| |
|
|||| |||||||||||||||||||||||| |
|
|
| T |
15172998 |
cccttgatcaccaagacactcctcacctat |
15173027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 20 - 248
Target Start/End: Original strand, 7592485 - 7592714
Alignment:
| Q |
20 |
gacatcatcaacattgggcaacaagttatacagctcactacaactggttatctcatgcgcaagcaa-gcaacagtgctttcaaagccaggcaaatcagaa |
118 |
Q |
| |
|
|||||||||| | ||||| |||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||| |
|
|
| T |
7592485 |
gacatcatcagaagtgggctgcaagttatacagctcatcacagctggttatctcatgcgcaagcaaagcaacagtgctttctaagtcaggcaaatcagaa |
7592584 |
T |
|
| Q |
119 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgcgtccaacagctctattttct |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
7592585 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacagctctattttct |
7592684 |
T |
|
| Q |
219 |
tcctttatcaccaagacactcctcacctat |
248 |
Q |
| |
|
|||| ||||||||||||||||||||||| |
|
|
| T |
7592685 |
cccttggtcaccaagacactcctcacctat |
7592714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 20 - 248
Target Start/End: Original strand, 15202224 - 15202453
Alignment:
| Q |
20 |
gacatcatcaacattgggcaacaagttatacagctcactacaactggttatctcatgcgcaagcaa-gcaacagtgctttcaaagccaggcaaatcagaa |
118 |
Q |
| |
|
|||||||||| | |||||| ||||||||||| |||| |||| ||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||| |
|
|
| T |
15202224 |
gacatcatcagaagtgggcagcaagttatacaactcattacagctggttatctcatgcgcaagcaaagcaacagtgcttttaaagccagacaaatcagaa |
15202323 |
T |
|
| Q |
119 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgcgtccaacagctctattttct |
218 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
15202324 |
agaacattcatagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacaactctattttct |
15202423 |
T |
|
| Q |
219 |
tcctttatcaccaagacactcctcacctat |
248 |
Q |
| |
|
|||| |||||||||||||||||||||||| |
|
|
| T |
15202424 |
cccttgatcaccaagacactcctcacctat |
15202453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0233 (Bit Score: 169; Significance: 9e-91; HSPs: 1)
Name: scaffold0233
Description:
Target: scaffold0233; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 20 - 248
Target Start/End: Complemental strand, 26812 - 26584
Alignment:
| Q |
20 |
gacatcatcaacattgggcaacaagttatacagctcactacaactggttatctcatgcgcaagcaagcaacagtgctttcaaagccaggcaaatcagaaa |
119 |
Q |
| |
|
|||||||||| ||||||||| |||||||||||||||| |||| ||| ||| |||||||||| ||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
26812 |
gacatcatcagcattgggcagcaagttatacagctcattacagctgattaactcatgcgcatacaagcaacagtgctttcaaagccagacaaatcagaaa |
26713 |
T |
|
| Q |
120 |
gaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgcgtccaacagctctattttctt |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||| ||||||||||| |
|
|
| T |
26712 |
gaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggatagctatcaaaaatgtgtccaacatctctattttctc |
26613 |
T |
|
| Q |
220 |
cctttatcaccaagacactcctcacctat |
248 |
Q |
| |
|
|||| |||||||||||||||||||||||| |
|
|
| T |
26612 |
ccttgatcaccaagacactcctcacctat |
26584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0028 (Bit Score: 166; Significance: 6e-89; HSPs: 2)
Name: scaffold0028
Description:
Target: scaffold0028; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 20 - 248
Target Start/End: Complemental strand, 95140 - 94911
Alignment:
| Q |
20 |
gacatcatcaacattgggcaacaagttatacagctcactacaactggttatctcatgcgcaagcaa-gcaacagtgctttcaaagccaggcaaatcagaa |
118 |
Q |
| |
|
|||||||||| | ||||| |||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||| |
|
|
| T |
95140 |
gacatcatcagaagtgggctgcaagttatacagctcatcacagctggttatctcatgcgcaagcaaagcaacagtgctttctaagtcaggcaaatcagaa |
95041 |
T |
|
| Q |
119 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgcgtccaacagctctattttct |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
95040 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacagctctattttct |
94941 |
T |
|
| Q |
219 |
tcctttatcaccaagacactcctcacctat |
248 |
Q |
| |
|
|||| ||||||||||||||||||||||| |
|
|
| T |
94940 |
cccttggtcaccaagacactcctcacctat |
94911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0028; HSP #2
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 20 - 248
Target Start/End: Complemental strand, 104581 - 104352
Alignment:
| Q |
20 |
gacatcatcaacattgggcaacaagttatacagctcactacaactggttatctcatgcgcaagcaa-gcaacagtgctttcaaagccaggcaaatcagaa |
118 |
Q |
| |
|
|||||||||| | ||||| |||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||| |
|
|
| T |
104581 |
gacatcatcagaagtgggctgcaagttatacagctcatcacagctggttatctcatgcgcaagcaaagcaacagtgctttctaagtcaggcaaatcagaa |
104482 |
T |
|
| Q |
119 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgcgtccaacagctctattttct |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
104481 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacagctctattttct |
104382 |
T |
|
| Q |
219 |
tcctttatcaccaagacactcctcacctat |
248 |
Q |
| |
|
|||| ||||||||||||||||||||||| |
|
|
| T |
104381 |
cccttggtcaccaagacactcctcacctat |
104352 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0482 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: scaffold0482
Description:
Target: scaffold0482; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 20 - 248
Target Start/End: Original strand, 3012 - 3241
Alignment:
| Q |
20 |
gacatcatcaacattgggcaacaagttatacagctcactacaactggttatctcatgcgcaagcaa-gcaacagtgctttcaaagccaggcaaatcagaa |
118 |
Q |
| |
|
|||||||||| | ||||| |||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |
|
|
| T |
3012 |
gacatcatcagaagtgggctgcaagttatacagctcattacagctggttatctcatgcgcaagcaaagcaacagtgctttcaaagtcaggcaaatcagaa |
3111 |
T |
|
| Q |
119 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgcgtccaacagctctattttct |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
3112 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaaaagatactttggacagctatcaaaaacgtgtccaacagctctattttct |
3211 |
T |
|
| Q |
219 |
tcctttatcaccaagacactcctcacctat |
248 |
Q |
| |
|
|||| ||||||||||||||||||||||| |
|
|
| T |
3212 |
cccttggtcaccaagacactcctcacctat |
3241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 20 - 248
Target Start/End: Complemental strand, 7789787 - 7789558
Alignment:
| Q |
20 |
gacatcatcaacattgggcaacaagttatacagctcactacaactggttatctcatgcgcaagcaa-gcaacagtgctttcaaagccaggcaaatcagaa |
118 |
Q |
| |
|
|||||||||| | ||||| |||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |
|
|
| T |
7789787 |
gacatcatcagaagtgggctgcaagttatacagctcattacagctggttatctcatgcgcaagcaaagcaacagtgctttcaaagtcaggcaaatcagaa |
7789688 |
T |
|
| Q |
119 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgcgtccaacagctctattttct |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
7789687 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaaaagatactttggacagctatcaaaaacgtgtccaacagctctattttct |
7789588 |
T |
|
| Q |
219 |
tcctttatcaccaagacactcctcacctat |
248 |
Q |
| |
|
|||| ||||||||||||||||||||||| |
|
|
| T |
7789587 |
cccttggtcaccaagacactcctcacctat |
7789558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 162; Significance: 1e-86; HSPs: 8)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 20 - 248
Target Start/End: Complemental strand, 28352430 - 28352201
Alignment:
| Q |
20 |
gacatcatcaacattgggcaacaagttatacagctcactacaactggttatctcatgcgcaagcaa-gcaacagtgctttcaaagccaggcaaatcagaa |
118 |
Q |
| |
|
|||||||||| | ||||| ||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||| |
|
|
| T |
28352430 |
gacatcatcagaagtgggctgcaagttatacaactcatcacagctggttatctcatgcgcaagcaaagcaacagtgctttctaagtcaggcaaatcagaa |
28352331 |
T |
|
| Q |
119 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgcgtccaacagctctattttct |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
28352330 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacagctctattttct |
28352231 |
T |
|
| Q |
219 |
tcctttatcaccaagacactcctcacctat |
248 |
Q |
| |
|
|||| ||||||||||||||||||||||| |
|
|
| T |
28352230 |
cccttggtcaccaagacactcctcacctat |
28352201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 20 - 248
Target Start/End: Complemental strand, 28368362 - 28368134
Alignment:
| Q |
20 |
gacatcatcaacattgggcaacaagttatacagctcactacaactggttatctcatgcgcaagcaa-gcaacagtgctttcaaagccaggcaaatcagaa |
118 |
Q |
| |
|
|||||||||| | ||||| |||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||| |
|
|
| T |
28368362 |
gacatcatcagaagtgggctgcaagttatacagctcatcacagctggttatctcatgcgcaagcaaagcaacagtgctttctaagtcaggcaaatcagaa |
28368263 |
T |
|
| Q |
119 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgcgtccaacagctctattttct |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
28368262 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacagctctattttct |
28368163 |
T |
|
| Q |
219 |
tcctttatcaccaagacactcctcacctat |
248 |
Q |
| |
|
|||| | ||||||||||||||||||||| |
|
|
| T |
28368162 |
cccttggt-accaagacactcctcacctat |
28368134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 20 - 248
Target Start/End: Complemental strand, 28376180 - 28375952
Alignment:
| Q |
20 |
gacatcatcaacattgggcaacaagttatacagctcactacaactggttatctcatgcgcaagcaa-gcaacagtgctttcaaagccaggcaaatcagaa |
118 |
Q |
| |
|
|||||||||| | ||||| |||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||| |
|
|
| T |
28376180 |
gacatcatcagaagtgggctgcaagttatacagctcatcacagctggttatctcatgcgcaagcaaagcaacagtgctttctaagtcaggcaaatcagaa |
28376081 |
T |
|
| Q |
119 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgcgtccaacagctctattttct |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
28376080 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacagctctattttct |
28375981 |
T |
|
| Q |
219 |
tcctttatcaccaagacactcctcacctat |
248 |
Q |
| |
|
|||| | ||||||||||||||||||||| |
|
|
| T |
28375980 |
cccttggt-accaagacactcctcacctat |
28375952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 20 - 248
Target Start/End: Complemental strand, 28384002 - 28383774
Alignment:
| Q |
20 |
gacatcatcaacattgggcaacaagttatacagctcactacaactggttatctcatgcgcaagcaa-gcaacagtgctttcaaagccaggcaaatcagaa |
118 |
Q |
| |
|
|||||||||| | ||||| |||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||| |
|
|
| T |
28384002 |
gacatcatcagaagtgggctgcaagttatacagctcatcacagctggttatctcatgcgcaagcaaagcaacagtgctttctaagtcaggcaaatcagaa |
28383903 |
T |
|
| Q |
119 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgcgtccaacagctctattttct |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
28383902 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacagctctattttct |
28383803 |
T |
|
| Q |
219 |
tcctttatcaccaagacactcctcacctat |
248 |
Q |
| |
|
|||| | ||||||||||||||||||||| |
|
|
| T |
28383802 |
cccttggt-accaagacactcctcacctat |
28383774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 20 - 248
Target Start/End: Complemental strand, 38529846 - 38529617
Alignment:
| Q |
20 |
gacatcatcaacattgggcaacaagttatacagctcactacaactggttatctcatgcgcaagcaagcaacagtgctttcaaagccaggcaaatcagaaa |
119 |
Q |
| |
|
|||||||||||||||||||||||||||| ||| |||| |||| |||||| ||||| |||||||||||||||||||||||||||| ||| ||| ||||||| |
|
|
| T |
38529846 |
gacatcatcaacattgggcaacaagttaaacaactcattacagctggttctctcacgcgcaagcaagcaacagtgctttcaaagtcagacaattcagaaa |
38529747 |
T |
|
| Q |
120 |
gaacattctgagaacgttctggctattttaaagaag-aaaagagaaatcaattgagactttggacagctatcaaaaacgcgtccaacagctctattttct |
218 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||| |||| ||||||| |||||||| ||||||||||| |
|
|
| T |
38529746 |
gaacattctgagaacggtctggctattttaaagaagaaaaaaagaaatcaattgagactttggacaactataaaaaacgtgtccaacaactctattttct |
38529647 |
T |
|
| Q |
219 |
tcctttatcaccaagacactcctcacctat |
248 |
Q |
| |
|
|||| |||||||||||||||||| ||||| |
|
|
| T |
38529646 |
cccttgatcaccaagacactcctcgcctat |
38529617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 99 - 248
Target Start/End: Original strand, 4951155 - 4951304
Alignment:
| Q |
99 |
caaagccaggcaaatcagaaagaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgc |
198 |
Q |
| |
|
|||||| | |||||||||| | |||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
4951155 |
caaagctatgcaaatcagacataacattatgagaacgttcttcctatttttaagaagaaaagagaaatcaattgagactttagacagttatcaaaaacgt |
4951254 |
T |
|
| Q |
199 |
gtccaacagctctattttcttcctttatcaccaagacactcctcacctat |
248 |
Q |
| |
|
|||||||| ||||| ||||| |||| |||||||||||||||||||||||| |
|
|
| T |
4951255 |
gtccaacaactctagtttctcccttgatcaccaagacactcctcacctat |
4951304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 248
Target Start/End: Complemental strand, 7784764 - 7784636
Alignment:
| Q |
119 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgcgtccaacagctctattttct |
218 |
Q |
| |
|
|||||||||| ||||| ||||| || ||| |||||||||||| |||||||||||| ||||||| |||| ||||||| |||||||| | |||||||| |
|
|
| T |
7784764 |
agaacattctaagaacattctgtctgttt-aaagaagaaaagtgaaatcaattgaagctttggaaagctgccaaaaacatgtccaacaacactattttca |
7784666 |
T |
|
| Q |
219 |
tcctttatcaccaagacactcctcacctat |
248 |
Q |
| |
|
||| ||||||||| |||| ||||||||| |
|
|
| T |
7784665 |
ctcttgatcaccaaggcactgctcacctat |
7784636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 150 - 248
Target Start/End: Original strand, 27168983 - 27169081
Alignment:
| Q |
150 |
aagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgcgtccaacagctctattttcttcctttatcaccaagacactcctcacctat |
248 |
Q |
| |
|
||||||||||| |||||||||||| | |||||||||| ||||| |||||||| |||||||||| ||| ||||||||| |||||||||||||| |
|
|
| T |
27168983 |
aagaagaaaagtgaaatcaattgaatcgttggacagctgcactaaacgtgtccaacacctctattttcactcttgatcaccaagtcactcctcacctat |
27169081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 158; Significance: 3e-84; HSPs: 1)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 20 - 248
Target Start/End: Original strand, 412777 - 413006
Alignment:
| Q |
20 |
gacatcatcaacattgggcaacaagttatacagctcactacaactggttatctcatgcgcaagcaa-gcaacagtgctttcaaagccaggcaaatcagaa |
118 |
Q |
| |
|
|||||||||| | |||||| |||||||||||||||| |||| |||||||||||||| |||||||| |||| ||||||||||||| ||| |||||||||| |
|
|
| T |
412777 |
gacatcatcagaagtgggcagcaagttatacagctcattacagctggttatctcatgtgcaagcaaagcaatagtgctttcaaagtcagacaaatcagaa |
412876 |
T |
|
| Q |
119 |
agaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgcgtccaacagctctattttct |
218 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||| |
|
|
| T |
412877 |
agaacattatgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaaagagtccaacaactctattttct |
412976 |
T |
|
| Q |
219 |
tcctttatcaccaagacactcctcacctat |
248 |
Q |
| |
|
|||| |||||||||||||||||||||||| |
|
|
| T |
412977 |
cccttgatcaccaagacactcctcacctat |
413006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 147; Significance: 1e-77; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 20 - 248
Target Start/End: Complemental strand, 31711162 - 31710945
Alignment:
| Q |
20 |
gacatcatcaacattgggcaacaagttatacagctcactacaactggttatctcatgcgcaagcaagcaacagtgctttcaaagccaggcaaatcagaaa |
119 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
31711162 |
gacatcatcagcattgggcaacaagttatacagctcattacaactggttctctcacgcgcaagcaagcaacagtgctttcaaagccaggaaaatcagaaa |
31711063 |
T |
|
| Q |
120 |
gaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgcgtccaacagctctattttctt |
219 |
Q |
| |
|
|||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |
|
|
| T |
31711062 |
gaacattctg-----------gctatttttaagaagaaaagagaaatcaattgagactttggacaactatcaaaaacgcgtccaacaactctattttctc |
31710974 |
T |
|
| Q |
220 |
cctttatcaccaagacactcctcacctat |
248 |
Q |
| |
|
||| |||||||||||||||||||||||| |
|
|
| T |
31710973 |
acttgatcaccaagacactcctcacctat |
31710945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 40 - 248
Target Start/End: Complemental strand, 24023429 - 24023221
Alignment:
| Q |
40 |
acaagttatacagctcactacaactggttatctcatgcgcaagcaagcaacagtgctttcaaagccaggcaaatcagaaagaacattctgagaacgttct |
139 |
Q |
| |
|
|||||||| |||||||| |||| ||||| ||||| ||||||| |||||||||||||||||||| |||||| ||||| |||||||||| |||||||||| |
|
|
| T |
24023429 |
acaagttaaacagctcattacagttggttctctcacgcgcaagaaagcaacagtgctttcaaagtaaggcaattcagacagaacattctaagaacgttct |
24023330 |
T |
|
| Q |
140 |
ggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgcgtccaacagctctattttcttcctttatcaccaagacactc |
239 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||| |||| ||||| ||||||||| |
|
|
| T |
24023329 |
ggctattttaaagaagaaaagagaaatcaattgagactttggatagctatcaaaaacgtgtccaacaactctattttctcccttgatcactaagacactc |
24023230 |
T |
|
| Q |
240 |
ctcacctat |
248 |
Q |
| |
|
||||||||| |
|
|
| T |
24023229 |
ctcacctat |
24023221 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 20 - 248
Target Start/End: Original strand, 14272537 - 14272764
Alignment:
| Q |
20 |
gacatcatcaacattgggcaacaagttatacagctcactacaactggttatctcatgcgcaagcaagcaacagtgctttcaaagccaggcaaatcagaaa |
119 |
Q |
| |
|
||||| |||||||||||||||||||| | ||| |||| |||| ||||| || | ||||||||||||||| ||||||||||| |||||| ||||| | |
|
|
| T |
14272537 |
gacataatcaacattgggcaacaagtaa-acaactcattacagttggttctccccctcgcaagcaagcaacaatgctttcaaagttaggcaattcagaca |
14272635 |
T |
|
| Q |
120 |
gaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgcgtccaacagctctattttctt |
219 |
Q |
| |
|
||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
14272636 |
gaacattctgaaaacgttctggctatttataagtagaaaagagaaatcaattgagactttggacagctatcaaaaacgtgtccaacaactctattttctc |
14272735 |
T |
|
| Q |
220 |
cctttatcaccaagacactcctcacctat |
248 |
Q |
| |
|
|||| |||||||||||||||||||||||| |
|
|
| T |
14272736 |
ccttgatcaccaagacactcctcacctat |
14272764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 32 - 248
Target Start/End: Complemental strand, 15810676 - 15810460
Alignment:
| Q |
32 |
attgggcaacaagttatacagctcactacaactggttatctcatgcgcaagcaagcaacagtgctttcaaagccaggcaaatcagaaagaacattctgag |
131 |
Q |
| |
|
|||| ||||||||| | |||||||| |||| |||||| ||||| ||||||||||||||||||| ||||| | |||||||||| | ||||||||||| |
|
|
| T |
15810676 |
attgagcaacaagtaaaacagctcattacagctggttctctcactcgcaagcaagcaacagtgcaagcaaagttatgcaaatcagacataacattctgag |
15810577 |
T |
|
| Q |
132 |
aacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctatcaaaaacgcgtccaacagctctattttcttcctttatcacca |
231 |
Q |
| |
|
| | ||||| ||||||| |||||||||| |||||||||| |||||||||||||||||||||| | |||||||| |||||||| | | || ||||||| |
|
|
| T |
15810576 |
atcattctgtctatttttaagaagaaaaatgaaatcaattaggactttggacagctatcaaaaatgtgtccaacaactctatttgcaccattgatcacca |
15810477 |
T |
|
| Q |
232 |
agacactcctcacctat |
248 |
Q |
| |
|
|||||||| |||||||| |
|
|
| T |
15810476 |
agacactcatcacctat |
15810460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 105 - 248
Target Start/End: Complemental strand, 41001003 - 41000857
Alignment:
| Q |
105 |
caggcaaatcagaaagaacattctgagaacgttctggctattttaaagaagaaaagagaaatcaattgagactttggacagctat---caaaaacgcgtc |
201 |
Q |
| |
|
||||||||||||| | |||||||||||| | ||||| | | ||| ||||||||||| |||||||| |||||||||||||| |||| ||||||| ||| |
|
|
| T |
41001003 |
caggcaaatcagacataacattctgagatctttctgcccaattttaagaagaaaagtgaaatcaaatgagactttggacatctataaaaaaaaacgtgtc |
41000904 |
T |
|
| Q |
202 |
caacagctctattttcttcctttatcaccaagacactcctcacctat |
248 |
Q |
| |
|
||||| |||||||||| ||| ||||||||| |||||||||||||| |
|
|
| T |
41000903 |
caacatctctattttcactcttgatcaccaaggcactcctcacctat |
41000857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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