View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0755_high_67 (Length: 246)

Name: NF0755_high_67
Description: NF0755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0755_high_67
NF0755_high_67
[»] chr6 (16 HSPs)
chr6 (1-246)||(22831588-22831833)
chr6 (1-246)||(16920423-16920666)
chr6 (1-246)||(11185590-11185833)
chr6 (1-246)||(20360750-20360994)
chr6 (1-246)||(20638073-20638317)
chr6 (53-246)||(25629144-25629339)
chr6 (1-246)||(29060627-29060872)
chr6 (68-246)||(18409616-18409795)
chr6 (139-246)||(18821609-18821716)
chr6 (1-246)||(20593860-20594105)
chr6 (52-246)||(22780017-22780212)
chr6 (68-246)||(19303330-19303509)
chr6 (1-90)||(35245671-35245758)
chr6 (52-246)||(17287586-17287781)
chr6 (161-203)||(18456961-18457003)
chr6 (52-171)||(25603250-25603370)
[»] chr2 (15 HSPs)
chr2 (1-246)||(20309193-20309436)
chr2 (1-246)||(37906-38149)
chr2 (1-246)||(23285948-23286192)
chr2 (1-234)||(23654188-23654420)
chr2 (1-246)||(22737970-22738214)
chr2 (1-246)||(298604-298848)
chr2 (53-246)||(22337252-22337447)
chr2 (1-246)||(22731023-22731268)
chr2 (70-246)||(27753730-27753906)
chr2 (52-246)||(23076578-23076773)
chr2 (52-246)||(32451719-32451913)
chr2 (1-246)||(23660109-23660354)
chr2 (2-131)||(40622114-40622244)
chr2 (52-219)||(23060649-23060815)
chr2 (5-33)||(23103399-23103427)
[»] scaffold0351 (1 HSPs)
scaffold0351 (1-246)||(16367-16610)
[»] scaffold0106 (2 HSPs)
scaffold0106 (1-246)||(1374-1617)
scaffold0106 (2-246)||(7352-7594)
[»] chr7 (15 HSPs)
chr7 (1-246)||(27847623-27847866)
chr7 (1-246)||(40443477-40443720)
chr7 (1-246)||(10589126-10589369)
chr7 (21-245)||(16386038-16386261)
chr7 (1-246)||(9509276-9509520)
chr7 (1-246)||(12698919-12699163)
chr7 (1-246)||(26212083-26212327)
chr7 (53-244)||(3564155-3564348)
chr7 (70-246)||(38227635-38227812)
chr7 (14-131)||(12187113-12187227)
chr7 (14-131)||(17137969-17138083)
chr7 (109-246)||(15143826-15143964)
chr7 (1-130)||(18456319-18456447)
chr7 (152-246)||(17061749-17061844)
chr7 (152-203)||(12756549-12756600)
[»] scaffold0598 (1 HSPs)
scaffold0598 (1-246)||(842-1085)
[»] scaffold0032 (1 HSPs)
scaffold0032 (1-246)||(51667-51910)
[»] chr8 (22 HSPs)
chr8 (1-244)||(16199438-16199679)
chr8 (1-246)||(31971343-31971586)
chr8 (1-241)||(45130793-45131032)
chr8 (1-246)||(21918790-21919034)
chr8 (1-246)||(18879027-18879270)
chr8 (1-136)||(21389353-21389486)
chr8 (1-246)||(20536295-20536539)
chr8 (2-123)||(21395896-21396015)
chr8 (1-118)||(21778697-21778812)
chr8 (2-123)||(21790389-21790508)
chr8 (54-246)||(25362930-25363123)
chr8 (52-246)||(18818199-18818394)
chr8 (80-246)||(21923718-21923884)
chr8 (52-246)||(23648689-23648885)
chr8 (1-246)||(28648833-28649078)
chr8 (1-246)||(22626822-22627067)
chr8 (68-246)||(6759408-6759588)
chr8 (1-246)||(22875151-22875397)
chr8 (72-233)||(7372927-7373088)
chr8 (52-246)||(23406517-23406712)
chr8 (56-246)||(16092130-16092323)
chr8 (152-246)||(41598421-41598516)
[»] chr1 (13 HSPs)
chr1 (1-246)||(38801181-38801424)
chr1 (1-246)||(27250519-27250763)
chr1 (8-246)||(22354362-22354599)
chr1 (54-246)||(21026818-21027011)
chr1 (1-246)||(50210002-50210247)
chr1 (44-240)||(22355969-22356168)
chr1 (44-240)||(22357655-22357854)
chr1 (53-246)||(22532406-22532601)
chr1 (1-246)||(34509867-34510112)
chr1 (52-244)||(20135323-20135517)
chr1 (109-246)||(20847009-20847146)
chr1 (54-131)||(48603652-48603730)
chr1 (152-246)||(433244-433339)
[»] chr4 (19 HSPs)
chr4 (1-246)||(14053092-14053336)
chr4 (1-246)||(12902844-12903088)
chr4 (1-155)||(17046572-17046724)
chr4 (44-246)||(3096772-3096974)
chr4 (1-243)||(44052916-44053157)
chr4 (1-246)||(7088964-7089208)
chr4 (1-246)||(22636522-22636765)
chr4 (1-246)||(23374149-23374393)
chr4 (54-246)||(17047862-17048055)
chr4 (1-241)||(16239764-16240004)
chr4 (53-246)||(14038785-14038980)
chr4 (53-246)||(16377311-16377507)
chr4 (52-246)||(7893839-7894032)
chr4 (2-92)||(15121747-15121834)
chr4 (52-235)||(6190599-6190782)
chr4 (112-246)||(15091093-15091228)
chr4 (52-125)||(16270147-16270221)
chr4 (186-246)||(7798968-7799028)
chr4 (161-246)||(44928712-44928798)
[»] scaffold0718 (1 HSPs)
scaffold0718 (1-242)||(4925-5164)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-246)||(32152-32395)
[»] scaffold0427 (1 HSPs)
scaffold0427 (8-246)||(13590-13826)
[»] scaffold0456 (1 HSPs)
scaffold0456 (1-246)||(10216-10459)
[»] scaffold0114 (2 HSPs)
scaffold0114 (1-246)||(15255-15498)
scaffold0114 (2-92)||(7378-7465)
[»] chr5 (19 HSPs)
chr5 (19-246)||(21292760-21292985)
chr5 (1-246)||(8286632-8286876)
chr5 (1-246)||(23390286-23390530)
chr5 (1-246)||(22075106-22075350)
chr5 (52-246)||(25421668-25421864)
chr5 (68-246)||(13025463-13025642)
chr5 (68-246)||(13095647-13095826)
chr5 (1-246)||(24493655-24493900)
chr5 (1-246)||(24529307-24529552)
chr5 (54-246)||(9078090-9078284)
chr5 (54-246)||(21985936-21986130)
chr5 (53-246)||(22107163-22107357)
chr5 (52-246)||(25431530-25431726)
chr5 (14-131)||(18769910-18770024)
chr5 (14-131)||(22032415-22032529)
chr5 (1-246)||(1096554-1096799)
chr5 (14-92)||(23572178-23572254)
chr5 (152-246)||(36154617-36154712)
chr5 (79-130)||(22412337-22412388)
[»] chr3 (23 HSPs)
chr3 (3-246)||(20698226-20698467)
chr3 (1-246)||(13442361-13442605)
chr3 (1-246)||(17487943-17488188)
chr3 (1-246)||(17499425-17499670)
chr3 (52-246)||(14576622-14576818)
chr3 (54-246)||(18438672-18438866)
chr3 (55-246)||(40213510-40213703)
chr3 (52-246)||(26687023-26687218)
chr3 (54-243)||(16796685-16796875)
chr3 (1-246)||(12399296-12399537)
chr3 (67-246)||(14572740-14572920)
chr3 (1-246)||(14972941-14973186)
chr3 (1-246)||(25476174-25476419)
chr3 (53-246)||(11424552-11424747)
chr3 (52-246)||(23083151-23083346)
chr3 (52-246)||(43841068-43841263)
chr3 (52-246)||(30029975-30030170)
chr3 (54-131)||(14179570-14179648)
chr3 (53-203)||(42386547-42386699)
chr3 (1-130)||(24153115-24153243)
chr3 (14-131)||(856234-856348)
chr3 (161-246)||(17248075-17248161)
chr3 (152-203)||(53070531-53070582)
[»] scaffold1842 (1 HSPs)
scaffold1842 (1-246)||(839-1082)
[»] scaffold0011 (2 HSPs)
scaffold0011 (1-246)||(167769-168012)
scaffold0011 (52-246)||(52049-52243)
[»] scaffold0064 (1 HSPs)
scaffold0064 (1-246)||(47080-47317)
[»] scaffold0358 (2 HSPs)
scaffold0358 (1-246)||(23-267)
scaffold0358 (1-246)||(4799-5043)
[»] scaffold0490 (1 HSPs)
scaffold0490 (1-246)||(2039-2283)
[»] scaffold0309 (1 HSPs)
scaffold0309 (1-246)||(6697-6941)
[»] scaffold0193 (1 HSPs)
scaffold0193 (1-246)||(13298-13542)
[»] scaffold0021 (1 HSPs)
scaffold0021 (8-246)||(124679-124916)
[»] scaffold0145 (2 HSPs)
scaffold0145 (52-246)||(38896-39092)
scaffold0145 (52-125)||(33077-33151)
[»] scaffold0292 (2 HSPs)
scaffold0292 (1-246)||(3557-3801)
scaffold0292 (52-246)||(478-674)
[»] scaffold0042 (1 HSPs)
scaffold0042 (8-246)||(24091-24329)
[»] scaffold0647 (1 HSPs)
scaffold0647 (8-246)||(5911-6148)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-246)||(1938-2182)
[»] scaffold0088 (1 HSPs)
scaffold0088 (1-246)||(20998-21242)
[»] scaffold0231 (1 HSPs)
scaffold0231 (1-246)||(22969-23214)
[»] scaffold0403 (1 HSPs)
scaffold0403 (1-246)||(4936-5179)
[»] scaffold0235 (1 HSPs)
scaffold0235 (108-246)||(11303-11441)
[»] scaffold0003 (1 HSPs)
scaffold0003 (68-246)||(339740-339918)
[»] scaffold0484 (1 HSPs)
scaffold0484 (54-246)||(1052-1245)
[»] scaffold0165 (2 HSPs)
scaffold0165 (78-246)||(3644-3812)
scaffold0165 (78-246)||(7708-7876)
[»] scaffold0141 (1 HSPs)
scaffold0141 (1-246)||(39563-39808)
[»] scaffold0080 (1 HSPs)
scaffold0080 (52-246)||(40048-40244)
[»] scaffold0049 (1 HSPs)
scaffold0049 (1-246)||(75004-75249)
[»] scaffold0122 (2 HSPs)
scaffold0122 (68-246)||(25854-26033)
scaffold0122 (68-246)||(33284-33463)
[»] scaffold0034 (1 HSPs)
scaffold0034 (52-246)||(51674-51868)
[»] scaffold0305 (1 HSPs)
scaffold0305 (109-246)||(20597-20734)
[»] scaffold0130 (1 HSPs)
scaffold0130 (1-246)||(27917-28162)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-246)||(17004-17249)
[»] scaffold0026 (2 HSPs)
scaffold0026 (52-246)||(39993-40188)
scaffold0026 (52-232)||(26031-26213)
[»] scaffold0639 (1 HSPs)
scaffold0639 (79-246)||(8639-8806)
[»] scaffold0175 (1 HSPs)
scaffold0175 (52-246)||(13228-13423)
[»] scaffold0121 (1 HSPs)
scaffold0121 (52-246)||(8322-8518)
[»] scaffold0217 (1 HSPs)
scaffold0217 (53-246)||(16389-16584)
[»] scaffold0215 (1 HSPs)
scaffold0215 (2-131)||(26911-27036)
[»] scaffold0228 (3 HSPs)
scaffold0228 (1-246)||(4594-4839)
scaffold0228 (1-246)||(12176-12421)
scaffold0228 (1-246)||(22128-22373)
[»] scaffold0084 (1 HSPs)
scaffold0084 (78-239)||(10326-10488)
[»] scaffold0540 (2 HSPs)
scaffold0540 (1-200)||(2987-3185)
scaffold0540 (211-246)||(802-837)
[»] scaffold0352 (1 HSPs)
scaffold0352 (95-233)||(17790-17928)
[»] scaffold0029 (1 HSPs)
scaffold0029 (14-131)||(12857-12971)
[»] scaffold1124 (1 HSPs)
scaffold1124 (14-131)||(1975-2089)
[»] scaffold0210 (2 HSPs)
scaffold0210 (14-131)||(21712-21826)
scaffold0210 (14-131)||(29604-29718)
[»] scaffold0395 (1 HSPs)
scaffold0395 (53-239)||(759-947)
[»] scaffold0070 (1 HSPs)
scaffold0070 (52-246)||(4660-4855)
[»] scaffold0627 (1 HSPs)
scaffold0627 (181-246)||(170-236)
[»] scaffold0839 (1 HSPs)
scaffold0839 (166-246)||(1866-1947)
[»] scaffold0120 (3 HSPs)
scaffold0120 (161-246)||(16333-16419)
scaffold0120 (152-246)||(32748-32843)
scaffold0120 (152-246)||(46162-46257)
[»] scaffold0327 (1 HSPs)
scaffold0327 (53-136)||(3429-3514)
[»] scaffold0908 (1 HSPs)
scaffold0908 (68-119)||(3103-3154)


Alignment Details
Target: chr6 (Bit Score: 242; Significance: 1e-134; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 22831588 - 22831833
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat 100  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
22831588 cataatcatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat 22831687  T
101 atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
22831688 atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa 22831787  T
201 tccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
22831788 tccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 22831833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 16920666 - 16920423
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat 100  Q
    ||||| |||||||||||| ||||||||||||||||  |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |    
16920666 cataagtatatcaaattccattcatcaacatctta--tgtatacaaatattcttcaagtaatgcataaacattataccacatcataatcaacaacaactt 16920569  T
101 atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa 200  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||    
16920568 atcttattcagcttcatagattatagttaacctcattcttaagtcttaattctacccaagggttcaactctcgagaaatcgtgcaacaaaggtcgcaaaa 16920469  T
201 tccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||||||||||||| ||||||| |||||||||| ||||||||||||    
16920468 tccaacaagtcactttgtttctgggtcactcgcaaggcgagagcct 16920423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 11185590 - 11185833
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat 100  Q
    ||||||||||||||||||||||||||| ||||||   ||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||    
11185590 cataattatatcaaattcaattcatcagcatcttt--tgtatacaaacattcttcaagtaatgcataaactttataacacttcataatcagcaacaacat 11185687  T
101 atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa 200  Q
    |||||||||| ||||||||||||  |||||||||| | | |||||||||| |||||||||||| | |  |||||| |  | ||| |||||||||||||||    
11185688 atcttattcatcttcacagattacggttaacctcactattaagtcttaatcctacccaagggtccgatcctcgacaacccatgcaacaaaggtcgcaaaa 11185787  T
201 tccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    || ||||||||||| ||||||| |||||||| ||||||||| ||||    
11185788 tctaacaagtcactatgtttctgggtcactcacgaggcgagggcct 11185833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 20360994 - 20360750
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||| | |||||||||||||||||| ||  || |||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
20360994 cataataatatcaattgcaattcatcaacatcttaaat--attcaaatattcttcaagtaatgcatataacattatatcacatcataatcaacaacaaca 20360897  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||  |||||||||| |||||| ||||||||||  | |||||||||| |||||||| |||||||  ||| || | |||||| ||||||||||||||    
20360896 catcttaaacagcttcacatattataattaacctcatcattaagtcttaatactacccaaaggttcaatcctcaacaactcgtgcaacaaaggtcgcaaa 20360797  T
200 atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    | | ||||||||||||||||||| |||||||||||||||||||||||    
20360796 acctaacaagtcactctgtttctgggtcactcgcgaggcgagagcct 20360750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 20638317 - 20638073
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaa-cattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||| | ||||| |||||||||||  ||  || |||||||||||||||||||||||||| | ||||| |||||||||||||||| |||||    
20638317 cataataatatcaattgcaatttatcaacatctttaat--attcaaacattcttcaagtaatgcataaaacgttatatcacatcataatcaacatcaaca 20638220  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||  ||||||||||||||||| ||||| ||||  | ||||||||||  || || | ||||||||||||||| | |||||| ||||||||||||||    
20638219 catcttaaacagcttcacagattataattaacatcatcattaagtcttaatgttatcccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaa 20638120  T
200 atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||| |||||| |||||||||||| |||||||||||||| ||||||||    
20638119 atctaacaaggcactctgtttctgggtcactcgcgaggtgagagcct 20638073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 53 - 246
Target Start/End: Complemental strand, 25629339 - 25629144
Alignment:
53 ttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaatt 151  Q
    |||||||||||| || ||||||||| |||||||||||||||| ||||| ||||||  ||||||||||||||||| |||||  |||  | |||||| |||     
25629339 ttcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacaacatcattaagtctcaata 25629240  T
152 ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||||| | |||||||||||  || | |||||| ||||| |||||||||||| |||||| |||||||||||| |||||||||||||||||||||||    
25629239 ctaccccaaggttcaactcttaacaactcgtgcaacaaaagtcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcct 25629144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 29060627 - 29060872
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||||| ||| ||| |||||||| |   |||||||  |||  ||||||||||||| | ||||||||| | |||||||||||||| |||||    
29060627 cataataatatcaaatgcaagtcaacaacatctcaa--gtatacattcataattcaagtaatgcacataacattatatctcatcataatcaacatcaaca 29060724  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||  ||||||||||||||||| ||||  ||||  | |||||| ||| |||||| | |||||| ||||   | | |||||| ||||||||||||||    
29060725 catcttaaacagcttcacagattataattaatatcatcattaagtctcaatactaccccaaggttcagctcttagcaactcgtgcaacaaaggtcgcaaa 29060824  T
200 atcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||| |||||| |||||||||||| |||||||||||||||||||||||    
29060825 atcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcct 29060872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 68 - 246
Target Start/End: Complemental strand, 18409795 - 18409616
Alignment:
68 aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaa 167  Q
    ||||||||| |||||||||||||||| ||||| ||||||  |||||||||| |||||| ||||| ||||  | |||||| ||| |||||| | |||||||    
18409795 aacattatatcacatcataatcaacatcaacacatcttaaacagcttcacatattataattaacatcatcattaagtctcaatactaccctaaggttcaa 18409696  T
168 ctctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||||| |  | |||||| |||||||||| ||||||| |||||| |||||||||||| ||||||| | |||||||||||||    
18409695 ctctcaataactcgtgcaacaaaggtcgtaaaatcctaacaaggcactctgtttctgggtcactagagaggcgagagcct 18409616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 139 - 246
Target Start/End: Complemental strand, 18821716 - 18821609
Alignment:
139 tcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggc 238  Q
    |||||||||||| |||||| | ||||||||||||||| | |||||| ||||||||||||||||| ||||||||||||||||||| |||| ||||||||||    
18821716 tcaagtcttaatgctaccccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcgctcgcgaggc 18821617  T
239 gagagcct 246  Q
    ||||||||    
18821616 gagagcct 18821609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 20593860 - 20594105
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||||| ||| ||| |||||||| | || ||||||| |||   ||||||||||| || |||| |||| |||||||||||||||| |||||    
20593860 cataataatatcaaatgcaagtcaacaacatctca-at-tatacaatcataaatcaagtaatgcgtataacaatatatcacatcataatcaacatcaaca 20593957  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||  ||||||||||||||||| ||| | | ||  | |||||| ||| |||||| | |||||||| ||  || | | |||||||| || |||||||    
20593958 catcttaaacagcttcacagattataattatcattatcattaagtctcaatactaccccaaggttcaacccttaacaacttgtgcgacacagatcgcaaa 20594057  T
200 atcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||| |||||| |||||||||||| |||||||||||||||||||||||    
20594058 atcctaacaaggcactctgtttctaggtcactcgcgaggcgagagcct 20594105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 52 - 246
Target Start/End: Complemental strand, 22780212 - 22780017
Alignment:
52 cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat 150  Q
    ||||||||||||||   ||||||||| |||| ||||||||||| ||||| ||||||  ||||||||||||||||  ||||| ||||  | ||||||| ||    
22780212 cttcaagtaatgcacgcaacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattatgattaacatcatcattaagtctttat 22780113  T
151 tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
     |||||| | ||||||||||||| | | | |||| ||||||||| ||||| | |||| | |||||||||||| ||| |||||||||||||||||||    
22780112 actaccccaaggttcaactctcggcaacttgtgcaacaaaggtcacaaaacctaacaggacactctgtttctaggttactcgcgaggcgagagcct 22780017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 68 - 246
Target Start/End: Complemental strand, 19303509 - 19303330
Alignment:
68 aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaa 167  Q
    ||||||||| |||||||||||||||| ||||| |||||   ||||||||||||||||| ||||| ||||  | || ||| | | |||||| | |||||||    
19303509 aacattatatcacatcataatcaacatcaacacatcttcaacagcttcacagattataattaacatcatcattaattctcagtgctaccccaaggttcaa 19303410  T
168 ctctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||||   | | | |||||||| || ||||||||||| |||||| |||||||||||| |||||||| ||||||||||||||    
19303409 ctcttagcaacttgtgcgacatagatcgcaaaatcctaacaaggcactctgtttctgggtcactctcgaggcgagagcct 19303330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 35245671 - 35245758
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatca 90  Q
    |||||| ||||||| ||||||||||||||||||||  |||||||||| |||||||||||||||||||| ||||||| |||||||||||||    
35245671 cataataatatcaatttcaattcatcaacatctta--tgtatacaaatattcttcaagtaatgcataatcattatatcacatcataatca 35245758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 52 - 246
Target Start/End: Complemental strand, 17287781 - 17287586
Alignment:
52 cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat 150  Q
    |||||||||||||| | ||||||||  || | ||||||||||  ||||| ||||||  ||||||||||| ||||| ||||| || |  | |||||| |||    
17287781 cttcaagtaatgcacataacattatgtcataacataatcaacctcaacacatcttaaacagcttcacaggttataattaacatcctcattaagtctcaat 17287682  T
151 tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
     |||||| | |||||||||||| || | |||||| |||||| | |||||  | |||||| |||||||||||| |||||||| |||| | |||||||    
17287681 gctaccccaaggttcaactctcaacaactcgtgcaacaaagatagcaaaccctaacaagacactctgtttctgggtcactcacgagacaagagcct 17287586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Original strand, 18456961 - 18457003
Alignment:
161 ggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc 203  Q
    |||||||||||| |||| ||||||||||||| |||||||||||    
18456961 ggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcc 18457003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 171
Target Start/End: Complemental strand, 25603370 - 25603250
Alignment:
52 cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat 150  Q
    |||||||||||| ||| ||||| ||| ||||||||||||||  || | | ||||||  |||||||||||||| || | ||| || |  | |||||||||     
25603370 cttcaagtaatgtatacaacatcatatcacatcataatcaatgactaaacatcttaaacagcttcacagattctattaaacatcgtcattaagtcttaaa 25603271  T
151 tctacccaagggttcaactct 171  Q
     |||||||| |||||||||||    
25603270 gctacccaaaggttcaactct 25603250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 199; Significance: 1e-108; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 20309193 - 20309436
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat 100  Q
    |||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
20309193 cataattatatcaaattcaattcatcaacatctta--tgtatacaaatattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat 20309290  T
101 atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa 200  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||||    
20309291 atcttattcagcttcacagattatagttaacctcattcttaagtcttaatcctacccaagggttcaactctcgacaaatcgtgcaacaagggtcgcaaaa 20309390  T
201 tccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    || ||||||||||| ||||||| |||||||||||||||||||||||    
20309391 tctaacaagtcactttgtttctgggtcactcgcgaggcgagagcct 20309436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 38149 - 37906
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat 100  Q
    |||||| ||||||| ||| |||||||| |||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
38149 cataataatatcaatttcgattcatcatcatctta--tgtatacaaacattcttcaagtaatgcataaacattatatcacatcataatcaacaacaacat 38052  T
101 atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa 200  Q
     |||||| |||||||| |||||||| ||||||||||| | |||||||||| |||||||| ||||||||||||||| | |||||| ||||||||||||||     
38051 gtcttatacagcttcagagattataattaacctcattgttaagtcttaatcctacccaaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaag 37952  T
201 tccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    || ||||||||||| ||||||| |||| ||||||||||||||||||    
37951 tctaacaagtcactatgtttctgggtcgctcgcgaggcgagagcct 37906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 23285948 - 23286192
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaa-cattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||| | |||||||||||||||||| ||  || ||||  |||||||||||||||||||| ||||||| ||||||||||||||||||||||    
23285948 cataataatatcaattgcaattcatcaacatcttaaat--attcaaatgttcttcaagtaatgcataaaacattatatcacatcataatcaacaacaaca 23286045  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||  ||||||||||||||||| ||||| || |  | |||||||||| |||||||| |||||||||||| || | || ||| ||||||||||||||    
23286046 catcttaaacagcttcacagattataattaacatcttcattaagtcttaatactacccaaaggttcaactctcaacaactcatgcaacaaaggtcgcaaa 23286145  T
200 atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||| ||||||||||||||||||| |||||||||||||||||||||||    
23286146 atctaacaagtcactctgtttctaggtcactcgcgaggcgagagcct 23286192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 23654420 - 23654188
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaa-cattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||| | |||||||||||||||||| ||  || |||  |||  |||||||||||||||| ||||||| ||||||||||| ||||||||||    
23654420 cataataatatcaattgcaattcatcaacatcttaaat--attcaagtattactcaagtaatgcataaaacattatatcacatcataattaacaacaaca 23654323  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||  ||||||||||||||||| |||||||| |  | |||||||||| |||||||| ||||||||||||||| | |||||| ||||||||||||||    
23654322 catcttaaacagcttcacagattataattaacctcttcattaagtcttaatgctacccaaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaa 23654223  T
200 atccaacaagtcactctgtttctcggtcactcgcg 234  Q
    ||| ||||||||||||||||||| |||||||||||    
23654222 atctaacaagtcactctgtttctgggtcactcgcg 23654188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 22738214 - 22737970
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||| | |||||||||||||||||| ||  || |||| ||||||||||||||||| | ||||||||| |||||||||||||||| |||||    
22738214 cataataatatcaattgcaattcatcaacatcttaaat--attcaaatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaaca 22738117  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||  ||||||||||||||||| ||||| || |  | |||||||||| |||||| | ||||||| |||| || | |||||| ||||||||||||||    
22738116 catcttaaacagcttcacagattataattaacatcctcattaagtcttaatactaccccaaggttcaattctcaacaactcgtgcaacaaaggtcgcaaa 22738017  T
200 atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    | | |||||| |||||||||||| |||||||||||||||||||||||    
22738016 acctaacaaggcactctgtttctaggtcactcgcgaggcgagagcct 22737970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 298848 - 298604
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaa-cattataacacatcataatcaacaacaaca 99  Q
    ||||| |||||||| | ||||||| |||||||||| ||  || |||| | |  |||||||||||||||| ||||||| ||||||||||| || |||||||    
298848 cataaatatatcaattgcaattcaacaacatcttaaat--attcaaataattctcaagtaatgcataaaacattatatcacatcataattaataacaaca 298751  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||| |||||||||| ||||||||||||||| |  | |||||||||| |||||||| |||| ||  ||| || | |||||| ||||||||||||||    
298750 catcttatacagcttcacatattatagttaacctcttcattaagtcttaatgctacccaaaggtttaatcctcaacaactcgtgcaacaaaggtcgcaaa 298651  T
200 atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||| ||||||||||||||||||| |||||||||||||||||||||||    
298650 atctaacaagtcactctgtttctgggtcactcgcgaggcgagagcct 298604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 53 - 246
Target Start/End: Original strand, 22337252 - 22337447
Alignment:
53 ttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaatt 151  Q
    |||||||||||| || ||||||||| |||||||||||||||| ||||||||||||  || ||||||| |||||| ||||| ||||  | ||||||||||     
22337252 ttcaagtaatgcgtataacattatatcacatcataatcaacatcaacatatcttaaacaacttcacaaattataattaacatcatcattaagtcttaata 22337351  T
152 ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||| | | |||||||||||| || | |||||| ||||||||| ||||| || |||||| | |||||||||| |||||||||||||||||||||||    
22337352 ctactccaaggttcaactctcaacaactcgtgcaacaaaggtcacaaaaacctaacaagactctctgtttctgggtcactcgcgaggcgagagcct 22337447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 22731268 - 22731023
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||| | |||||||||||||| ||| ||  || |||| ||||||||||||||||| | ||||||||| |||||||||||||||| |||||    
22731268 cataataatatcaattgcaattcatcaacatattaaat--attcaaatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaaca 22731171  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattcta-cccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaa 198  Q
     ||||||  ||||||||||||||||| ||||| || |  | |||||||||| ||| ||| | ||||||| | || ||   |||||| |||||| ||||||    
22731170 catcttaaacagcttcacagattataattaacatcctcattaagtcttaatactacccccaaggttcaattatcaacagctcgtgcaacaaagatcgcaa 22731071  T
199 aatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    || | |||||| |||||||||||| ||| ||||| |||||||||||||    
22731070 aacctaacaaggcactctgtttctgggtgactcgtgaggcgagagcct 22731023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 70 - 246
Target Start/End: Original strand, 27753730 - 27753906
Alignment:
70 cattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaact 169  Q
    ||||||| |||||||||||||||| ||||| ||||||  ||| |||||| |||||| ||||| ||||  | |||||||||| ||| || | | |||||||    
27753730 cattatatcacatcataatcaacatcaacacatcttaaacagtttcacatattataattaacatcatcattaagtcttaatgctatcccaagcttcaact 27753829  T
170 ctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||||| | |||||| || |||||||||||||| |||||| |||||||||||| ||||||| |||||||||||||||    
27753830 ctcgacaactcgtgcaacgaaggtcgcaaaatctaacaaggcactctgtttctgggtcacttgcgaggcgagagcct 27753906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 52 - 246
Target Start/End: Original strand, 23076578 - 23076773
Alignment:
52 cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat 150  Q
    |||||||||||||| | ||||||||| |||||||||||||||| ||||| | ||||  ||||||||||||||||| ||||| ||||  | || ||  |||    
23076578 cttcaagtaatgcacataacattatatcacatcataatcaacatcaacacagcttaaacagcttcacagattataattaacatcatcataaaatcccaat 23076677  T
151 tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
     |||||| |  ||||||||||| || | |||||| ||||||||||||||| | |||||| |||||||||||| ||| |||||||||||||||||||    
23076678 actaccccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaacctaacaaggcactctgtttctgggtaactcgcgaggcgagagcct 23076773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 52 - 246
Target Start/End: Complemental strand, 32451913 - 32451719
Alignment:
52 cttcaagtaatgcataaacattataacacatcataa-tcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat 150  Q
    ||||||||||||| || |||| ||| |||||||||| ||||||  |||||  | ||  |||||||||| ||| || ||||  ||||  ||||||||||||    
32451913 cttcaagtaatgcgtatacataatatcacatcataaatcaacattaacatcccataa-cagcttcacaaattgtaattaatatcatattcaagtcttaat 32451815  T
151 tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
     |||||| | |||||| |||||||| | |||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
32451814 gctaccccaaggttcatctctcgacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcactcgcgaggcgagagcct 32451719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 23660109 - 23660354
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||||| ||| ||| |||||||||| ||  || ||| |||   ||||||||||| || ||||||||| |||||||||||||||| |||||    
23660109 cataataatatcaaatgcaaatcaacaacatcttaaat--attcaatcataactcaagtaatgcgtataacattatatcacatcataatcaacatcaaca 23660206  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||  |||||| ||| |||||| ||||| ||||    |||||| ||| |||||| | |||||||||||| |  | |||||| | ||||||| ||||    
23660207 catcttaaacagctttacaaattataattaacatcatcaataagtctcaatactaccccaaggttcaactctcaataactcgtgcaataaaggtcacaaa 23660306  T
200 atcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    | || |||||| |||||||||||| |||||||| ||||||||||||||    
23660307 aacctaacaaggcactctgtttctgggtcactcacgaggcgagagcct 23660354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 40622244 - 40622114
Alignment:
2 ataattatatcaaattcaattcatcaacatcttagatgta---tacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaac 98  Q
    ||||||||||||| ||||||||||||||||||||  | ||   |||||| ||||||||||||||||||||||||||||| |||||||||||||||  |||    
40622244 ataattatatcaa-ttcaattcatcaacatcttatgtatacagtacaaatattcttcaagtaatgcataaacattataatacatcataatcaacacaaac 40622146  T
99 atatcttattcagcttcacagattatagttaac 131  Q
    || || ||  ||||||||||||||  |||||||    
40622145 atctcata-acagcttcacagattgcagttaac 40622114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 52 - 219
Target Start/End: Original strand, 23060649 - 23060815
Alignment:
52 cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat 150  Q
    |||||||||||||| | ||||||||| |||||||||||||||| ||||| ||||||  |||||||||| |||||| ||||| ||||  | |||||  |||    
23060649 cttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcaca-attataattaacatcatcattaagtcccaat 23060747  T
151 tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtt 219  Q
     |||||| |  |||||| |||| || | |||||  ||||||||||||||| | |||||| |||||||||    
23060748 actaccccaaagttcaattctcaacaactcgtg-aacaaaggtcgcaaaacctaacaaggcactctgtt 23060815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 33
Target Start/End: Complemental strand, 23103427 - 23103399
Alignment:
5 attatatcaaattcaattcatcaacatct 33  Q
    |||||||||||||||||||||||||||||    
23103427 attatatcaaattcaattcatcaacatct 23103399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 16367 - 16610
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat 100  Q
    ||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
16367 cataattatatcaaattcaattcatcaacatatta--tgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat 16464  T
101 atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa 200  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| |||||||||||||  |||||||| ||||||||| |||||    
16465 atcttattcagcttcacagattatagttaacctcattattaagtcttaatcctacccaagcgttcaactctcgagaaatcgtgcaacaaaggtcacaaaa 16564  T
201 tccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
16565 tccaacaagtcactctgtttctaggtcactcgcgaggcgagagcct 16610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 195; Significance: 1e-106; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 1374 - 1617
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat 100  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
1374 cataattatatcaaattcaattcatcaacatctta--tgtatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacat 1471  T
101 atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa 200  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||| | |||||| ||||||||||||||     
1472 atcttattcagcttcatagattatagttaacctcattcttaagtcttaatcctacccaagggtccaactctcgacaactcgtgcaacaaaggtcgcaaac 1571  T
201 tccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
1572 tccaacaagtcactctgtttctaggtcactcgcgaggcgagagcct 1617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 2 - 246
Target Start/End: Original strand, 7352 - 7594
Alignment:
2 ataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacata 101  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
7352 ataattatatcaaattcaattcatcaacatctta--tgtatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacata 7449  T
102 tcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaat 201  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||| | |||||| |||||||||||||| |    
7450 tcttattcagcttcatagattatagttaacctcattcttaagtcttaatcctacccaagggtccaactctcgacaactcgtgcaacaaaggtcgcaaact 7549  T
202 ccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
7550 ccaacaagtcactctgtttctaggtcactcgcgaggcgagagcct 7594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 191; Significance: 1e-104; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 27847866 - 27847623
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat 100  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
27847866 cataattatatcaaattcaattcatcaacatctta--tgtatacaaacattcttcaagtaatgcataaacattatcacacatcataatcaacaacaacat 27847769  T
101 atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa 200  Q
    |||||||||||||||||||||||||||||| |||||| | |||||||||| |||||||||||||||||||||||| | |||||| |||||||||||||||    
27847768 atcttattcagcttcacagattatagttaatctcattattaagtcttaatcctacccaagggttcaactctcgacaactcgtgcaacaaaggtcgcaaaa 27847669  T
201 tccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    || ||||||||||||||||| | |||||||||||||||||||||||    
27847668 tctaacaagtcactctgtttttgggtcactcgcgaggcgagagcct 27847623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 40443477 - 40443720
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat 100  Q
    |||||| ||||||| |||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||    
40443477 cataataatatcaatttcaattcatcaacatcttag--gtatacaaatattcttcaagtaatgcataaacattatatcacatcataatcaacaacgacat 40443574  T
101 atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa 200  Q
    ||||||| ||||||||||||||||| ||||||||||| | |||||||||| ||||||||||||||| |||||||| | |||||| |||||||||||||||    
40443575 atcttatacagcttcacagattataattaacctcattgttaagtcttaatcctacccaagggttcatctctcgacaactcgtgcaacaaaggtcgcaaaa 40443674  T
201 tccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||    
40443675 tccaataagtcactctgtttctgggtcactcgcgaggcgagagcct 40443720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 10589126 - 10589369
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat 100  Q
    |||||| ||||||| | ||||||| |||||||||  ||||   |||| |||||||||| ||||||||||||||||| ||||||||||||| ||||||||     
10589126 cataatcatatcaattgcaattcaacaacatcttcaatgtt--caaatattcttcaagcaatgcataaacattatatcacatcataatcagcaacaacac 10589223  T
101 atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa 200  Q
    ||||||   |||||||||||||||| ||||||||||  | |||||||||| |||||||| ||| ||||||| ||| | |||||| | |||||||||||||    
10589224 atcttaaatagcttcacagattataattaacctcatcattaagtcttaatcctacccaaaggtccaactctagacaactcgtgcaaaaaaggtcgcaaaa 10589323  T
201 tccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    || ||||||||||||||||||| |||||||||||||||||||||||    
10589324 tctaacaagtcactctgtttctgggtcactcgcgaggcgagagcct 10589369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 21 - 245
Target Start/End: Complemental strand, 16386261 - 16386038
Alignment:
21 ttcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaa-cattataacacatcataatcaacaacaacatatcttattcagcttcacag 119  Q
    ||||||||||||||| ||  || |||||| |  |||||||||||||||| |||||||  ||||||||||||||||||||| ||||||  |||||||||||    
16386261 ttcatcaacatcttaaat--attcaaacaattctcaagtaatgcataaaacattatattacatcataatcaacaacaacacatcttaaacagcttcacag 16386164  T
120 attatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtt 219  Q
    ||||||||||||||| |  | ||||||||||  ||||||| ||||||||||| ||| | || ||| ||||||||||||||||| ||||||||||||||||    
16386163 attatagttaacctcttcattaagtcttaatgttacccaaaggttcaactctggacaactcatgcaacaaaggtcgcaaaatctaacaagtcactctgtt 16386064  T
220 tctcggtcactcgcgaggcgagagcc 245  Q
    ||| ||||||||||||||||||||||    
16386063 tctgggtcactcgcgaggcgagagcc 16386038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 9509276 - 9509520
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||| | |||||||||||||||||| ||  || |||| ||||||||||||||||| | |||| |||| |||||||||||||||| |||||    
9509276 cataataatatcaattgcaattcatcaacatcttaaat--attcaaatattcttcaagtaatgcacataacactatatcacatcataatcaacatcaaca 9509373  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||  ||||||||||||||||| ||||| || |  | |||||||||| ||| || | ||||||||||||||| | || ||| ||||||||||||||    
9509374 catcttaaacagcttcacagattataattaacatcctcattaagtcttaatgctatcccaaggttcaactctcgacaactcttgcaacaaaggtcgcaaa 9509473  T
200 atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||| |||||| |||||||||||| |||||||||||||||||||||||    
9509474 atctaacaaggcactctgtttctgggtcactcgcgaggcgagagcct 9509520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 12698919 - 12699163
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||| | |||||||||||||||||| ||  || |||| ||||||||||||||||| | ||||||||| |||||||||||||||| |||||    
12698919 cataataatatcaattgcaattcatcaacatcttaaat--attcaaatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaaca 12699016  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||  ||||||||||||||||| ||||| || |  | || ||||||| |||||| | ||||||||| ||||| | |||||| ||||||||||||||    
12699017 catcttaaacagcttcacagattataattaacatcctcattaactcttaatactaccccaaggttcaactatcgacaactcgtgcaacaaaggtcgcaaa 12699116  T
200 atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    | | ||||||||||| ||||||| |||||||| ||||| ||||||||    
12699117 acctaacaagtcactttgtttctgggtcactcacgaggtgagagcct 12699163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 26212083 - 26212327
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaa-cattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||| | ||||||| |||||||||| ||  || |||| | |  |||||||||||||||| ||||||| ||||| ||||||||||||||||    
26212083 cataataatatcaattgcaattcaacaacatcttaaat--attcaaataattctcaagtaatgcataaaacattatatcacattataatcaacaacaaca 26212180  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||  ||||||||||||||||| |||||||| |  | |||||||||| |||||||| |||| ||  ||| || | |||||| ||||||||||||||    
26212181 catcttaaacagcttcacagattataattaacctcttcattaagtcttaatgctacccaaaggtttaatcctcaacaactcgtgcaacaaaggtcgcaaa 26212280  T
200 atccaacaagtcactctg-tttctcggtcactcgcgaggcgagagcct 246  Q
    | | ||||| |||||||| ||||| |||||||||||||||||||||||    
26212281 a-ctaacaaatcactctgttttctgggtcactcgcgaggcgagagcct 26212327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 244
Target Start/End: Complemental strand, 3564348 - 3564155
Alignment:
53 ttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaatt 151  Q
    |||||||||||| || ||||||| | |||||||||||||||| ||||| ||||||  || ||||| || ||||| ||||| ||||  | |||||| |||     
3564348 ttcaagtaatgcgtataacattagatcacatcataatcaacatcaacacatcttaaacaacttcataggttataattaacatcatcattaagtctcaata 3564249  T
152 ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagc 244  Q
    |||||| | |||| ||||||  || | |||||| |||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||    
3564248 ctaccccaaggttaaactcttaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcgagagc 3564155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 70 - 246
Target Start/End: Original strand, 38227635 - 38227812
Alignment:
70 cattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaact 169  Q
    ||||||| |||||| ||||||||| ||||||||||||   | ||||||| |||||| ||||| ||||  | |||||||||| |||||| | |||||||||    
38227635 cattatatcacatcttaatcaacatcaacatatcttaaatatcttcacatattataattaacatcatcattaagtcttaatactaccccaaggttcaact 38227734  T
170 ctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||  || | |||||| ||||||||||||||| || |||||| |||||||||| | |||||||||||||||||||||||    
38227735 cttaacaactcgtgcaacaaaggtcgcaaaaacctaacaaggcactctgtttatgggtcactcgcgaggcgagagcct 38227812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 12187113 - 12187227
Alignment:
14 aattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagct 113  Q
    ||||||||||||||||||||||  |||||||||  | ||||||||||||||||||||||||||| |||||||| |||||   ||||| ||||| ||||||    
12187113 aattcaattcatcaacatctta--tgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaactcaaacatctctta-tcagct 12187209  T
114 tcacagattatagttaac 131  Q
    |||||||||  |||||||    
12187210 tcacagattgcagttaac 12187227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 17138083 - 17137969
Alignment:
14 aattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagct 113  Q
    ||||||||||||||||||||||  |||||||||  | ||||||||||||||||||||||||||| |||||||| ||||||  ||||| || || ||||||    
17138083 aattcaattcatcaacatctta--tgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaacacaaacatctcata-tcagct 17137987  T
114 tcacagattatagttaac 131  Q
    |||||||||  |||||||    
17137986 tcacagattgcagttaac 17137969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 109 - 246
Target Start/End: Complemental strand, 15143964 - 15143826
Alignment:
109 cagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aaca 207  Q
    |||||| |||||||||| | ||| ||||  | |||||||| | ||||||   |||||||||||   | | |||||| |||||||||||||||||| ||||    
15143964 cagcttgacagattatattaaacatcatcattaagtcttagtactaccccgaggttcaactcttagcaactcgtgcaacaaaggtcgcaaaatcctaaca 15143865  T
208 agtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    || |||||||||||| |||||||||||||||||||||||    
15143864 aggcactctgtttctaggtcactcgcgaggcgagagcct 15143826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 18456447 - 18456319
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||||| ||| ||| |||||||||| ||  || |||  || |||||||||||||| | ||||||||| |||||||||||||||| |||||    
18456447 cataataatatcaaatgcaagtcaacaacatcttaaat--attcaattatacttcaagtaatgcacataacattatatcacatcataatcaacatcaaca 18456350  T
100 tatcttattcagcttcacagattatagttaa 130  Q
     ||||||  ||||||||||||||||| ||||    
18456349 catcttaaacagcttcacagattataattaa 18456319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 246
Target Start/End: Complemental strand, 17061844 - 17061749
Alignment:
152 ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc--aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||||| | |||||||||||| |||| ||||||||||||| |||||||||||  |||||| || |||||   | |||||||||||||||||||||||    
17061844 ctaccccatggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattctgtaaataggtcactcgcgaggcgagagcct 17061749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 12756600 - 12756549
Alignment:
152 ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc 203  Q
    |||||| | |||||||||||| |||| ||||||||||||| |||||||||||    
12756600 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcc 12756549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 1085 - 842
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat 100  Q
    |||||||||||||| ||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
1085 cataattatatcaatttcaattcatcaacatctta--tgtatacaaatattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat 988  T
101 atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa 200  Q
    || |||| ||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||| |||||||| |||||||| ||||||    
987 attttatacagcttcacagattatagttaacctcattcttaagacttaatcctacccaagggttcaactctcgacaaatcgtgcaacaaaggttgcaaaa 888  T
201 tccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    || ||||||||||||||||||| ||| |||||||||||||||||||    
887 tctaacaagtcactctgtttctgggttactcgcgaggcgagagcct 842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 51667 - 51910
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat 100  Q
    |||||||||| ||||||||||||||||||||||||  |||||||||| || ||||||| ||||||||||||||||||||| ||||| |||||||||||||    
51667 cataattataacaaattcaattcatcaacatctta--tgtatacaaatatccttcaagaaatgcataaacattataacacttcatattcaacaacaacat 51764  T
101 atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa 200  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||| ||| ||||||| | |||||| ||||| |||||||||    
51765 atcttattcagcttcacagattatagttaacctcactcttaagtcttaatcctacccaagggtccaattctcgacaactcgtgcaacaaaagtcgcaaaa 51864  T
201 tccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    || ||||||||||||||||||| |||||||||||||||||||||||    
51865 tctaacaagtcactctgtttctgggtcactcgcgaggcgagagcct 51910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 165; Significance: 2e-88; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 16199679 - 16199438
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat 100  Q
    |||||| ||||||| ||||||||||| |||||||||  ||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||    
16199679 cataataatatcaatttcaattcatctacatcttag--gtatacaaatattcttcaagtaatgcataaacattatattacatcataatcaacaacaacat 16199582  T
101 atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa 200  Q
    ||||||| ||||||||||||||||| ||||||||||| | |||||||||| |||||||||||||||||||||||| | |||||| |||||||||||||||    
16199581 atcttatacagcttcacagattataattaacctcattgttaagtcttaatcctacccaagggttcaactctcgacaactcgtgcaacaaaggtcgcaaaa 16199482  T
201 tccaacaagtcactctgtttctcggtcactcgcgaggcgagagc 244  Q
    ||||| |||||||||||||| | |||||||||||||||||||||    
16199481 tccaataagtcactctgtttttgggtcactcgcgaggcgagagc 16199438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 31971343 - 31971586
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat 100  Q
    |||||| ||||||| | ||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
31971343 cataataatatcaattccaattcatcaacatctta--tgtatacaaatattcttcaagtaatgcataaacattatatcacatcataatcaacaacaacat 31971440  T
101 atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa 200  Q
    ||||||| || |||||||||||||| ||||||||||| | |||||||||| |||||||| |||||| |||||||| | |||||| |||||||||||||||    
31971441 atcttatacatcttcacagattataattaacctcattgttaagtcttaatcctacccaaaggttcagctctcgacaactcgtgcaacaaaggtcgcaaaa 31971540  T
201 tccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    || ||||||||||||| ||||| |||| ||||||||| || |||||    
31971541 tctaacaagtcactctatttctgggtcgctcgcgaggtgacagcct 31971586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 45131032 - 45130793
Alignment:
1 cataattatatcaaattcaa-ttcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||| ||||| ||||||||||||||||  ||||||||  |||||||||||||||||||||||||||| ||||||||||||| ||||||||    
45131032 cataataatatcaatttcaaattcatcaacatcttag--gtatacaattattcttcaagtaatgcataaacattatatcacatcataatcatcaacaaca 45130935  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||| ||||||||||||||||| ||||||||||| | |||||||||| |||||||||||| ||||||||||| | |||||| ||||||||||||||    
45130934 aatcttatacagcttcacagattataattaacctcattattaagtcttaatcctacccaagggtccaactctcgacaactcgtgcaacaaaggtcgcaaa 45130835  T
200 atccaacaagtcactctgtttctcggtcactcgcgaggcgag 241  Q
    ||| || |||||||||||||||| ||||||||||||||||||    
45130834 atctaataagtcactctgtttctgggtcactcgcgaggcgag 45130793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 21919034 - 21918790
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaaca-ttcttcaagtaatgcataaacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||| | ||||||| |||||||||| ||  || |||| | ||||||||||||||||||||||||||| ||||||||||||| || |||||    
21919034 cataataatatcaattgcaattcaacaacatcttaaat--attcaaataattcttcaagtaatgcataaacattatatcacatcataatcagcagcaaca 21918937  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||  |||||||||||||  || ||||||||||  | ||||||||||  ||||||||||||||||||||||| | || ||| ||||||||||||||    
21918936 catcttaaacagcttcacagatcgtaattaacctcatcgttaagtcttaatcttacccaagggttcaactctcgacaactcatgcaacaaaggtcgcaaa 21918837  T
200 atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||| ||||||||||||||||||| |||||||||||||||||||||||    
21918836 atctaacaagtcactctgtttctaggtcactcgcgaggcgagagcct 21918790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 18879270 - 18879027
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||| | |||||||||||||||||| ||  || |||| ||||||||||||||||  | ||||||||| |||||||||||||||| || ||    
18879270 cataataatatcaattgcaattcatcaacatcttaaat--attcaaatattcttcaagtaatgctcataacattatatcacatcataatcaacatcagca 18879173  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||| ||||||||||||||||||||||| ||||  | ||||||| || ||| || | ||||||||||||||| | |||||| ||||||| ||||||    
18879172 catcttat-cagcttcacagattatagttaacatcatcattaagtcttgatgctatcccaaggttcaactctcgacaactcgtgcaacaaaggccgcaaa 18879074  T
200 atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||| |||||| |||||||||||| |||||||||||||||||||||||    
18879073 atctaacaaggcactctgtttctgggtcactcgcgaggcgagagcct 18879027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 21389486 - 21389353
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat 100  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
21389486 cataattatatcaaattcaattcatcaacatctta--tgtatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacat 21389389  T
101 atcttattcagcttcacagattatagttaacctcat 136  Q
    |||||||||||||||||| |||| | ||||| ||||    
21389388 atcttattcagcttcacatattacaattaacttcat 21389353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 20536295 - 20536539
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||| | |||||||||||||||||| ||  || |||| ||||||||||||||||| | ||||||||| |||||||||||| ||| |||||    
20536295 cataataatatcaattgcaattcatcaacatcttaaat--attcaaatattcttcaagtaatgcacataacattatatcacatcataatcgacatcaaca 20536392  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||  || |||||||||||||| ||||| || |  | |||||||||| |||||| | |||||||| |||||| | |||||| ||||||||||||||    
20536393 catcttaaacaacttcacagattataattaacatcctcattaagtcttaatactaccccaaggttcaacactcgacaactcgtgcaacaaaggtcgcaaa 20536492  T
200 atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    | | || |||||||||||||||| |||||||||||||||||||||||    
20536493 acctaataagtcactctgtttctgggtcactcgcgaggcgagagcct 20536539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 21396015 - 21395896
Alignment:
2 ataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacata 101  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
21396015 ataattatatcaaattcaattcatcaacatctta--tgtatacaaacattcttcaagtaatgcataaacattataacacttcataatcaataacaacata 21395918  T
102 tcttattcagcttcacagatta 123  Q
    ||||||||||||||||||||||    
21395917 tcttattcagcttcacagatta 21395896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 21778812 - 21778697
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat 100  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
21778812 cataattatatcaaattcaattcatcaacatctta--tgtatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacat 21778715  T
101 atcttattcagcttcaca 118  Q
    ||||||||||||||||||    
21778714 atcttattcagcttcaca 21778697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 21790508 - 21790389
Alignment:
2 ataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacata 101  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
21790508 ataattatatcaaattcaattcatcaacatctta--tgtatacaaacattcttcaagtaatgcataaacattataacacttcataatcaataacaacata 21790411  T
102 tcttattcagcttcacagatta 123  Q
    ||||||||||||||||||||||    
21790410 tcttattcagcttcacagatta 21790389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 54 - 246
Target Start/End: Complemental strand, 25363123 - 25362930
Alignment:
54 tcaagtaatgcataaa-cattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattc 152  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||| ||||||  ||||||||||||||||| ||| |||| |  | |||||||||| |    
25363123 tcaagtaatgcataaaacattataccacatcataatcaacaacaacacatcttaaacagcttcacagattataattagcctcttcattaagtcttaatac 25363024  T
153 tacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||||||| |||||||||||| || | |||||| | |||||||||||| ||  ||||| |||||||||||  |||||||| ||||||||||||||    
25363023 tacccaaaggttcaactctcaacaactcgtgcaagaaaggtcgcaaagtctcacaaggcactctgtttccgggtcactctcgaggcgagagcct 25362930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 52 - 246
Target Start/End: Complemental strand, 18818394 - 18818199
Alignment:
52 cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat 150  Q
    |||||||||||||| | ||||||||| |||| ||||||||||| ||||| ||||||  ||||||||||||||||| ||||| || |  | ||||||||||    
18818394 cttcaagtaatgcacataacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcattaagtcttaat 18818295  T
151 tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
     |||||| |   |||||||||| || | |||||| ||||||||||||||| | |||||| |||||||||||| |||||||||||||||||||||||    
18818294 actaccctaaatttcaactctcaacaactcgtgcaacaaaggtcgcaaaacctaacaagacactctgtttctgggtcactcgcgaggcgagagcct 18818199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 80 - 246
Target Start/End: Complemental strand, 21923884 - 21923718
Alignment:
80 catcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaat 179  Q
    |||||||||||||||||||| ||||||  ||||||||||||||||| ||||| ||||  | |||||||||| |||||  | |||||||||||| || | |    
21923884 catcataatcaacaacaacacatcttaaacagcttcacagattataattaacatcatcattaagtcttaatactacctcaaggttcaactctcaactact 21923785  T
180 cgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    || || ||||||||||||||| | |||||| |||||||||||| |||||||||||||||||||||||    
21923784 cgggcaacaaaggtcgcaaaacctaacaaggcactctgtttctgggtcactcgcgaggcgagagcct 21923718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 52 - 246
Target Start/End: Original strand, 23648689 - 23648885
Alignment:
52 cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat 150  Q
    |||||||||||||| | ||||||||| |||||||||||||||| ||||| ||||||  |||||| |||||||||| ||||| ||||  | | ||||||||    
23648689 cttcaagtaatgcacacaacattatatcacatcataatcaacatcaacacatcttaaacagcttaacagattataattaacatcatcattaggtcttaat 23648788  T
151 tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgca-aaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
     |||||| | |||||||||||| || | |||||| |||||||||||| ||| | ||||||||||||||||||| ||| |||| ||||||||||||||    
23648789 actaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcataaacctaacaagtcactctgtttctgggttactcacgaggcgagagcct 23648885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 28649078 - 28648833
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||||| ||| ||| |||||||||| || ||||||  |||  |||||||||||  || ||||||||| |||||||||||||||| |||||    
28649078 cataataatatcaaatgcaagtcaacaacatctta-at-tatacattcataattcaagtaatgtgtataacattatatcacatcataatcaacatcaaca 28648981  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||  |||||||||| |||||| ||||| ||||  | |||||| ||| |||||| | |||||||||||| || | |||||| ||||||||||||||    
28648980 catcttaaacagcttcacatattataattaacatcatcattaagtctcaatactaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaa 28648881  T
200 atcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||| |||||| |||||||||||| |||||  ||| ||||||||||||    
28648880 atcctaacaaggcactctgtttctgggtcatgcgcaaggcgagagcct 28648833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 22626822 - 22627067
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||||| ||| ||| |||||||||| ||  || |||  || ||||||||||||  || ||||||||| |||||||| |||| || |||||    
22626822 cataataatatcaaatacaaatcaacaacatcttaaat--attcaattatacttcaagtaatgtgtataacattatatcacatcattatcatcatcaaca 22626919  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||  ||||||||||||||||| ||||| || |  | |||||| ||| |||||| | |||||||||||| || | |||||| ||||||||||||||    
22626920 catcttaaacagcttcacagattataattaacatcctcattaagtctcaatactaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaa 22627019  T
200 atcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    | || |||||| |||||||||||| | |||||||||||||||||||||    
22627020 aacctaacaagacactctgtttctagatcactcgcgaggcgagagcct 22627067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 68 - 246
Target Start/End: Original strand, 6759408 - 6759588
Alignment:
68 aacattataacacatcataatcaacaacaacatatcttatt-cagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttca 166  Q
    ||||||||| |||||||||||||||| ||||| ||||||   ||||||||||||||||| ||||| ||||  | |||||| ||| |||||| | ||||||    
6759408 aacattatatcacatcataatcaacatcaacacatcttaaaacagcttcacagattataattaacatcatcattaagtctcaatactaccccaaggttca 6759507  T
167 actctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||||   | | | |||||||| || | ||||||||| |||||| |||||||||||| |||||||||||||||||||||||    
6759508 actcttagcaacttgtgcgacacagattgcaaaatcctaacaagacactctgtttctgggtcactcgcgaggcgagagcct 6759588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 22875151 - 22875397
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||||| ||| ||| |||||||| | ||  |||||  |||  |||||||||||| || ||||||||| |||||||||||||||| |||||    
22875151 cataataatatcaaatgcaagtcaacaacatctcaaat--atacattcataattcaagtaatgcgtataacattatatcacatcataatcaacatcaaca 22875248  T
100 tatcttatt-cagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaa 198  Q
     ||||||   ||||||||||||||||| ||||| |||   | |  ||| ||| |||||| | |||||||||||  || | | |||||||| || ||||||    
22875249 catcttaaaacagcttcacagattataattaacatcaccattacatctcaatactaccccaaggttcaactcttaacaacttgtgcgacatagatcgcaa 22875348  T
199 aatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |  || ||||||||||||||||||| |||||||||||||||||||||||    
22875349 agccctaacaagtcactctgtttctgggtcactcgcgaggcgagagcct 22875397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 72 - 233
Target Start/End: Original strand, 7372927 - 7373088
Alignment:
72 ttataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactct 171  Q
    ||||| |||| ||||||||||| ||||| ||||||  ||||||||||||||||| ||||| || |  | |||||| | | | |||| |  ||||||||||    
7372927 ttatatcacaacataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcattaagtctcactaccaccccaaagttcaactct 7373026  T
172 cgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgc 233  Q
    | || | |||||| ||||||||||||||| | |||||| |||||||||||| ||||||||||    
7373027 caacaactcgtgcaacaaaggtcgcaaaacctaacaagacactctgtttctgggtcactcgc 7373088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 52 - 246
Target Start/End: Original strand, 23406517 - 23406712
Alignment:
52 cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat 150  Q
    |||||||||||||| | ||||||||| |||| |||| |||||| ||||| ||||||  || ||||||| |||||| ||||| || |  | |||||  |||    
23406517 cttcaagtaatgcacataacattatatcacaacatagtcaacatcaacacatcttaaacaacttcacatattataattaacatcctcattaagtcccaat 23406616  T
151 tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
      || || |  ||||||||||| |  | |||||| ||||||||| ||||| | |||||| |||||||||||| |||||||||||||||||||||||    
23406617 attatcccaaagttcaactctcaataactcgtgcaacaaaggtcacaaaacctaacaaggcactctgtttctgggtcactcgcgaggcgagagcct 23406712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 56 - 246
Target Start/End: Complemental strand, 16092323 - 16092130
Alignment:
56 aagtaatgcata-aacattataacacatcataatcaacaacaacatatcttatt-cagcttcacagattatagttaacctcattctcaagtcttaattct 153  Q
    ||||||||| || ||||||||| |||||||||||||||| ||||| ||||||   || |||| || |||||| ||||| |||| || |||||| |||  |    
16092323 aagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaaacaacttcgcatattataattaacatcatccttaagtctcaatatt 16092224  T
154 acccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||| | |||||||||||  || | | ||| |||| || ||||||||||| |||| | |||||||||||| ||||||||| |||||||||||||    
16092223 accccaaggttcaactcttaacaacttgtgtgacacagatcgcaaaatcctaacagggcactctgtttctgggtcactcgggaggcgagagcct 16092130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 246
Target Start/End: Original strand, 41598421 - 41598516
Alignment:
152 ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc--aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||||| | |||||||||||| |||| ||||||| ||||| |||||||||||  |||||| || |||||  || |||||||||||||||||||||||    
41598421 ctaccccaaggttcaactctcaacgactcgtgcggcaaagatcgcaaaatcctaaacaag-cattctgtaactaggtcactcgcgaggcgagagcct 41598516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 163; Significance: 4e-87; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 38801424 - 38801181
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat 100  Q
    ||||||||||||||||||||||||||||||| ||| ||  ||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
38801424 cataattatatcaaattcaattcatcaacatattatat--atacaattattcttcaagtaatgcataaacattataacacatcgtaatcaacaacaacat 38801327  T
101 atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa 200  Q
    |||||||||||||||||| ||||||||||| |||||| | |||||||||| ||||||||||||||||||  |||| | |||| | |||||||||||||||    
38801326 atcttattcagcttcacaaattatagttaatctcattattaagtcttaatcctacccaagggttcaacttccgacaactcgtacaacaaaggtcgcaaaa 38801227  T
201 tccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    || ||||||||||||||||||| |||||||||||||||||||||||    
38801226 tctaacaagtcactctgtttctaggtcactcgcgaggcgagagcct 38801181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 27250763 - 27250519
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaa-cattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||| | |||||||||||||||||| ||  || |||| ||| ||||||||||||||||| ||||||| ||||||||||||||||||||||    
27250763 cataataatatcaattgcaattcatcaacatcttaaat--attcaaatattattcaagtaatgcataaaacattatatcacatcataatcaacaacaaca 27250666  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||  ||||||||||||||||| |||||||| |  | |||| | ||| |||||||| ||||||||||||||| | |||||| ||||||||||||||    
27250665 catcttaaacagcttcacagattataattaacctcttcattaagtatcaatgctacccaaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaa 27250566  T
200 atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||  ||||||  |||||||||||  ||||||||||||||||||||||    
27250565 atataacaagggactctgtttctgtgtcactcgcgaggcgagagcct 27250519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 8 - 246
Target Start/End: Complemental strand, 22354599 - 22354362
Alignment:
8 atatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatctta 106  Q
    ||||||| | |||||||||||||||||| ||  || |||| ||||||||||||||| ||| ||||||||| |||||||||||||||| ||||| ||||||    
22354599 atatcaattgcaattcatcaacatcttaaat--attcaaatattcttcaagtaatgtatataacattatatcacatcataatcaacatcaacacatctta 22354502  T
107 ttcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaac 206  Q
      ||||||||||||||||| ||||| || |  | |||||||||| ||||| || ||||||| |||| || | |||||| ||||||||||||||| | |||    
22354501 aacagcttcacagattataattaacatcctcattaagtcttaatactacctaaaggttcaattctcaacaactcgtgcaacaaaggtcgcaaaacctaac 22354402  T
207 aagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||||||||||||||| ||||||| |||||||||||||||    
22354401 aagtcactctgtttctgggtcacttgcgaggcgagagcct 22354362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 54 - 246
Target Start/End: Original strand, 21026818 - 21027011
Alignment:
54 tcaagtaatgcataaa-cattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattc 152  Q
    |||||||||||||||| ||||||| |||||||||||||||| ||||| ||||||  ||||||||||||||||| |||||||| |  | |||||||||| |    
21026818 tcaagtaatgcataaaacattatatcacatcataatcaacagcaacacatcttaaacagcttcacagattataattaacctcttcattaagtcttaatgc 21026917  T
153 tacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||||||| |||| ||  ||| || | |||||| ||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||    
21026918 tacccaaaggtttaatcctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactttgtttctgggtcactcgcgaggcgagagcct 21027011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 50210247 - 50210002
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||||| ||| ||| |||||||| |   |||||||  |||  |||||||||||| |  ||||||||| |||||||||||||||| |||||    
50210247 cataataatatcaaatgcaagtcaacaacatctcaa--gtatacattcataattcaagtaatgcgtttaacattatatcacatcataatcaacatcaaca 50210150  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||  ||||||||||||||||| ||||| ||||  | |||||| ||| |||||||| |||||||||||| || | |||||| ||||||||||||||    
50210149 catcttaaacagcttcacagattataattaacatcatcattaagtctcaatactacccaaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaa 50210050  T
200 atcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||| |||||| |||||||||||| |||||||||||||||||||||||    
50210049 atcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcct 50210002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 44 - 240
Target Start/End: Complemental strand, 22356168 - 22355969
Alignment:
44 caaacattcttcaagtaatgcata-aacattataacacatcataatcaa-caacaacatatcttattcagcttcacagattatagttaacctcattctca 141  Q
    |||||||||||||||||||||| | ||||||||| |||||||||||||| || ||||| ||||||   |||||||||||||||| ||||| ||||  | |    
22356168 caaacattcttcaagtaatgcacataacattatatcacatcataatcaatcatcaacacatcttaaatagcttcacagattataattaacatcatcatta 22356069  T
142 agtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaa-gtcactctgtttctcggtcactcgcgaggcga 240  Q
    ||||||||| ||| || | ||||||||||||||| | |||||| ||||||||| ||||||| ||||| |||||||||||||| |||||||||||| ||||    
22356068 agtcttaatgctatcccaaggttcaactctcgacaactcgtgcaacaaaggtctcaaaatctaacaatgtcactctgtttctaggtcactcgcgatgcga 22355969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 44 - 240
Target Start/End: Complemental strand, 22357854 - 22357655
Alignment:
44 caaacattcttcaagtaatgcata-aacattataacacatcataatcaa-caacaacatatcttattcagcttcacagattatagttaacctcattctca 141  Q
    |||||||||||||||||||||| | ||||||||| |||||||||||||| || ||||| ||||||   |||||||||||||||| ||||| ||||  | |    
22357854 caaacattcttcaagtaatgcacataacattatatcacatcataatcaatcatcaacacatcttaaatagcttcacagattataattaacatcatcatta 22357755  T
142 agtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaa-gtcactctgtttctcggtcactcgcgaggcga 240  Q
    ||||||||| ||| || | ||||||||||||||| | |||||| ||||||||| ||||||| ||||| |||||||||||||| |||||||||||| ||||    
22357754 agtcttaatgctatcccaaggttcaactctcgacaactcgtgcaacaaaggtctcaaaatctaacaatgtcactctgtttctaggtcactcgcgatgcga 22357655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 53 - 246
Target Start/End: Original strand, 22532406 - 22532601
Alignment:
53 ttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaatt 151  Q
    ||||||||||||| | ||||||||| |||||||||||||||| ||||| ||||||  ||||||||||| | |||  |||| ||||  | |||||| |||     
22532406 ttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagttcataaataacatcatcattaagtctcaata 22532505  T
152 ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||||  | |||||||||||| ||   |||||| |||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||    
22532506 ctacctcaaggttcaactctcaacagctcgtgcaacaaaggtcgcaaaatcctaacaagtcactctgtttttgggtcactcgcgaggcgagagcct 22532601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 34509867 - 34510112
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||||| ||| ||| |||||||||| || ||||||  |||   ||||||||||| || ||||||||| ||||||||| |||||| |||||    
34509867 cataatgatatcaaatgcaagtcaacaacatctta-at-tatacattcatatctcaagtaatgcttataacattatatcacatcatattcaacatcaaca 34509964  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||  |||||||| |||||||| ||||| ||||  | |||||| ||| |||||| | |||||||| ||| || | |||||| ||||||||||||||    
34509965 catcttaaacagcttcaaagattataattaacatcatcattaagtctcaatactaccccaaggttcaaccctcaacaactcgtgcaacaaaggtcgcaaa 34510064  T
200 atcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    | || |||| | |||||||||||| ||||||||| |||||||||||||    
34510065 aacctaacatgacactctgtttctgggtcactcgtgaggcgagagcct 34510112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 52 - 244
Target Start/End: Original strand, 20135323 - 20135517
Alignment:
52 cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat 150  Q
    |||||||||||||||| ||||||||| || |||||||| |||| ||||| ||||||  ||||||||||||||||| |||||  |||  | | |||||| |    
20135323 cttcaagtaatgcatacaacattatatcatatcataatgaacatcaacacatcttaaacagcttcacagattataattaacaacatcattaggtcttact 20135422  T
151 tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgca-aaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagc 244  Q
     |||||| | |||||||||||| || | |||| | |||||||||||| ||| | ||||||||||||||||||| ||| |||||||||| ||||||    
20135423 actaccctaaggttcaactctcaacaactcgtacaacaaaggtcgcataaacctaacaagtcactctgtttctgggttactcgcgaggtgagagc 20135517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 109 - 246
Target Start/End: Complemental strand, 20847146 - 20847009
Alignment:
109 cagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaa 208  Q
    |||||||| ||||||| ||||||||| |  | |||||||||| |||||||| |||| ||  ||| || | |||||| ||||||||||||||||| |||||    
20847146 cagcttcatagattatggttaacctcttcattaagtcttaatgctacccaaaggtttaatcctcaacaactcgtgcaacaaaggtcgcaaaatctaacaa 20847047  T
209 gtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||||||||||||| ||||||||||||||| |||||||    
20847046 gtcactctgtttctgggtcactcgcgaggcaagagcct 20847009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 48603652 - 48603730
Alignment:
54 tcaagtaatgcataaa-cattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaac 131  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||| ||||||  ||||||||||||||||| |||||    
48603652 tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaac 48603730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 246
Target Start/End: Original strand, 433244 - 433339
Alignment:
152 ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc--aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||||| | |||||||||||| |||| ||||||||||||| |||||||||||  |||||| || | ||   || |||||||||||||||||||||||    
433244 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattttgcaactgggtcactcgcgaggcgagagcct 433339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 160; Significance: 2e-85; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 14053336 - 14053092
Alignment:
1 cataattatatcaaattcaattcatcaacat-cttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||| |||||||||||||||| ||||  || ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
14053336 cataataatatcaatttcaattcatcaacattctta--tgcatacaaatattcttcaagtaatgcataaacattatatcacatcataatcaacaacaaca 14053239  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
    |||||||| | ||||||||||||||| ||||||||||| | |||||||||| |||||||||||||||||||||||| | |||||| ||||||||||||||    
14053238 tatcttatacggcttcacagattataattaacctcattgttaagtcttaatcctacccaagggttcaactctcgacaactcgtgcaacaaaggtcgcaaa 14053139  T
200 atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||| ||||||||||||||||||| |||||||||| ||||||||||||    
14053138 atctaacaagtcactctgtttctgggtcactcgcaaggcgagagcct 14053092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 12902844 - 12903088
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaa-cattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||| |  ||||||||||||||||| ||  || |||| ||| ||||||||||||||||| ||||||| ||||||||||||||||||||||    
12902844 cataataatatcaattgtaattcatcaacatcttaaat--attcaaatattattcaagtaatgcataaaacattatatcacatcataatcaacaacaaca 12902941  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||  ||||||||||||||||| |||||||| |  | |||||||||| |||||||| |||||||||||| ||   |||||| ||||||||||||||    
12902942 catcttaaacagcttcacagattataattaacctcttcattaagtcttaatcctacccaaaggttcaactctcaacagctcgtgcaacaaaggtcgcaaa 12903041  T
200 atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||| |||||| |||||||||||| |||||||||||||||| ||||||    
12903042 atctaacaaggcactctgtttctgggtcactcgcgaggcgggagcct 12903088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 17046572 - 17046724
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat 100  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
17046572 cataattatatcaaattcaattcatcaacatctta--tgtatacaaacattcttcaagtaatgtataaacattataacacatcttaatcaacaacaacat 17046669  T
101 atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctac 155  Q
    ||||||||||||||||||||||||| ||||||| ||| | |||||||||| ||||    
17046670 atcttattcagcttcacagattataattaaccttattattaagtcttaatcctac 17046724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 44 - 246
Target Start/End: Original strand, 3096772 - 3096974
Alignment:
44 caaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaag 143  Q
    |||| ||||||||||||||||||||||||| || | ||||||||||| |||||||| ||||||  |||||||||| |||||| ||||||||||  | |||    
3096772 caaatattcttcaagtaatgcataaacattgtatctcatcataatcagcaacaacacatcttaaacagcttcacatattataattaacctcatcattaag 3096871  T
144 tcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagag 243  Q
    | || || |||||||| ||||||||||||||| | |||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
3096872 tatttatcctacccaaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcactcgcgaggcgagag 3096971  T
244 cct 246  Q
    |||    
3096972 cct 3096974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 44052916 - 44053157
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||| | |||||||||||||||||| ||  || |||| ||||||||||||||||  | ||||||||| |||||||||||||||| || ||    
44052916 cataataatatcaattgcaattcatcaacatcttaaat--attcaaatattcttcaagtaatgctcataacattatatcacatcataatcaacatcagca 44053013  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||  ||||||||||||||||| ||||| ||||  | |||||||||| ||| || | ||||||||||||||| | |||||| ||||||||||||||    
44053014 catcttaaacagcttcacagattataattaacatcatcattaagtcttaatgctatcccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaa 44053113  T
200 atccaacaagtcactctgtttctcggtcactcgcgaggcgagag 243  Q
    ||| |||||| |||||||||||| ||||||||||||||||||||    
44053114 atctaacaaggcactctgtttctgggtcactcgcgaggcgagag 44053157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 7088964 - 7089208
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaa-cattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||| | |||||||||||||||||| ||  || |||| ||| ||||||||||||||||| ||||||| ||||||||||| | ||||||||    
7088964 cataataatatcaattgcaattcatcaacatcttacat--attcaaatattattcaagtaatgcataaaacattatatcacatcataattagcaacaaca 7089061  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||  || |||||||||||||| |||||||| |  | |||||||||| |||| ||| ||||||||||||||| | || ||| ||||||||||||||    
7089062 catcttaaacaacttcacagattataattaacctcttcattaagtcttaatgctactcaaaggttcaactctcgacaactcttgcaacaaaggtcgcaaa 7089161  T
200 atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||| |||||| |||||||||||  |||||||||||||||||||||||    
7089162 atctaacaagacactctgtttccgggtcactcgcgaggcgagagcct 7089208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 22636522 - 22636765
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||| | |||||||||||||||||| ||  || |||| ||||||||||||||||||| ||||||||| |||||||||||| ||| |||||    
22636522 cataataatatcaattgcaattcatcaacatcttaaat--attcaaatattcttcaagtaatgcatataacattatatcacatcataatcgacatcaaca 22636619  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||  ||||||||||||||||| ||||| || |  | |||||||||| |||||| | ||||||| |||| || | |||||| ||||||||||||||    
22636620 catcttaa-cagcttcacagattataattaacatcctcgttaagtcttaatactaccccaaggttcaattctcaacaactcgtgcaacaaaggtcgcaaa 22636718  T
200 atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    | | |||||| |||||||||||| ||||||||| |||||||||||||    
22636719 acctaacaagacactctgtttctgggtcactcgtgaggcgagagcct 22636765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 23374393 - 23374149
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaa-cattataacacatcataatcaacaacaaca 99  Q
    ||||| |||||||| | ||||||| |||||||||| ||  || |||| | |  |||||||||||||||| ||||||| ||||||||||||||||||||||    
23374393 cataaatatatcaattgcaattcaacaacatcttaaat--attcaaataattctcaagtaatgcataaaacattatatcacatcataatcaacaacaaca 23374296  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||   ||||||| ||||||||||||||||| |  | |||||||||| |||||||| |||| ||  ||| || | |||||| |||||||| |||||    
23374295 gatcttaaaaagcttcagagattatagttaacctcttcattaagtcttaatgctacccaaaggtttaatcctcaacaactcgtgcaacaaaggttgcaaa 23374196  T
200 atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||| ||||||||||||||||||| |||||| ||||||||||||||||    
23374195 atctaacaagtcactctgtttctgggtcacccgcgaggcgagagcct 23374149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 54 - 246
Target Start/End: Complemental strand, 17048055 - 17047862
Alignment:
54 tcaagtaatgcataaa-cattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattc 152  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||| ||||||  ||||||||||| || || |||  ||| |  | |||||||||| |    
17048055 tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacaggttgtaattagtctcttcattaagtcttaatac 17047956  T
153 tacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||||||| |||||||||||| || | |||||| |||||||||||||| ||  ||||| |||||||||||  |||||||||||||||||||||||    
17047955 tacccaaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaagtctcacaaggcactctgtttccgggtcactcgcgaggcgagagcct 17047862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 16240004 - 16239764
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||||| ||| ||| |||||||||| ||  || |||  || ||| |||||||||| | ||||||||| || ||||||||||||| |||||    
16240004 cataataatatcaaatgcaagtcaacaacatcttaaat--attcaattatactttaagtaatgcaaataacattatatcatatcataatcaacatcaaca 16239907  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||  ||||||| ||||||||| ||||| ||||  | |||||||||| |||||| |  ||||||||||| || | |||||| ||||||||||||||    
16239906 catcttaaacagcttcgcagattataattaacatcatcattaagtcttaatactaccccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaa 16239807  T
200 atcc-aacaagtcactctgtttctcggtcactcgcgaggcgag 241  Q
    | || ||||||||||||||||||| ||||||||||||||||||    
16239806 aacctaacaagtcactctgtttctgggtcactcgcgaggcgag 16239764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 53 - 246
Target Start/End: Original strand, 14038785 - 14038980
Alignment:
53 ttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaatt 151  Q
    ||||||||||||| | ||||||||| |||||||||||||||| ||||| || |||  ||||||||||||||||| ||||  ||||  | |||||| |||     
14038785 ttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatgttaaacagcttcacagattataattaatatcatcattaagtctcaata 14038884  T
152 ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||||| | |||||||||||   | | | |||||||| || ||||||||||| |||||| |||||||||||| |||||||||||||||||||||||    
14038885 ctaccccaaggttcaactcttagcaacttgtgcgacacagatcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcct 14038980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 53 - 246
Target Start/End: Complemental strand, 16377507 - 16377311
Alignment:
53 ttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaatt 151  Q
    |||||||||||| || ||||||||| |||||||||||||||| ||||  ||||||  ||||| ||||||||||| ||||| ||||  | |||||| |||     
16377507 ttcaagtaatgcgtataacattatatcacatcataatcaacatcaacgcatcttaaacagctccacagattataattaacatcatcattaagtctcaata 16377408  T
152 ctacccaagggttcaactctc-gacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||||| | ||||||||||||  |  | |||||| |||||||| ||||||||| |||||| |||| ||||||| ||||||||| |||||||||||||    
16377407 ctaccccaaggttcaactctcataaaactcgtgcaacaaaggtagcaaaatcctaacaaggcactatgtttctgggtcactcgtgaggcgagagcct 16377311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 52 - 246
Target Start/End: Original strand, 7893839 - 7894032
Alignment:
52 cttcaagtaatgcataaac-attataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat 150  Q
    |||||||||||||| | || |||||  ||||||||||||| |||||    ||||||  ||||||||||||||||| ||||| ||||  | ||||||||||    
7893839 cttcaagtaatgcacataccattatttcacatcataatcagcaacac---atcttaaacagcttcacagattataattaacatcatcgttaagtcttaat 7893935  T
151 tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
      ||||| | ||||||||||||| | | || ||| ||||||||||||||| || |||||| | |||||||||| ||||||||| |||||||||||||    
7893936 attaccccaaggttcaactctcggcaactcatgcaacaaaggtcgcaaaaacctaacaagactctctgtttctgggtcactcgtgaggcgagagcct 7894032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 15121834 - 15121747
Alignment:
2 ataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaac 92  Q
    ||||||||||||| ||||||||||||||||||||  |||||||||  | ||||||||||||||||||||||||||| ||||||||||||||    
15121834 ataattatatcaa-ttcaattcatcaacatctta--tgtatacaattaatcttcaagtaatgcataaacattataatacatcataatcaac 15121747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 235
Target Start/End: Original strand, 6190599 - 6190782
Alignment:
52 cttcaagtaatgcataaacattataacacatcata-atcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat 150  Q
    ||||||||||||| || |||||| | ||||||||| |||||||  ||||| || ||  |||||||||  ||| || ||||  ||||  ||||||||||||    
6190599 cttcaagtaatgcgtatacattagatcacatcatacatcaacattaacatctcataa-cagcttcacgaattgtaattaatatcatattcaagtcttaat 6190697  T
151 tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcga 235  Q
     |||| | | |||||||||||||||   |||||| ||||||||||||||||| ||||||||||||| ||| | ||||||||||||    
6190698 gctacgccaaggttcaactctcgacagctcgtgcaacaaaggtcgcaaaatctaacaagtcactctatttttgggtcactcgcga 6190782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 246
Target Start/End: Original strand, 15091093 - 15091228
Alignment:
112 cttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagt 210  Q
    |||||||||||||| ||||| || |  | |||||| ||| |||||| | |||||||||||     | | |||||||| || ||||||||||| ||||||     
15091093 cttcacagattataattaacatcttcattaagtctcaatactaccccaaggttcaactcttagaaacttgtgcgacacagatcgcaaaatcctaacaagg 15091192  T
211 cactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||||||||||| |||||||||||||||||||||||    
15091193 cactctgtttctgggtcactcgcgaggcgagagcct 15091228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 125
Target Start/End: Complemental strand, 16270221 - 16270147
Alignment:
52 cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattata 125  Q
    |||||||||||||| | ||||||||| |||||||||||||||| ||||| ||||||  |||||||||||||||||    
16270221 cttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattata 16270147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 246
Target Start/End: Original strand, 7798968 - 7799028
Alignment:
186 acaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||||||||||||||| | |||||| |||| ||||||| |||||||||||||||||||||||    
7798968 acaaaggtcgcaaaacctaacaagacactttgtttctgggtcactcgcgaggcgagagcct 7799028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 246
Target Start/End: Complemental strand, 44928798 - 44928712
Alignment:
161 ggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc--aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||||||||||| |||| ||||||||||||| |||||||||||  |||||| || |||||  || |||||||||||||||||||||||    
44928798 ggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattctgtaactgggtcactcgcgaggcgagagcct 44928712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 159; Significance: 9e-85; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 5164 - 4925
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat 100  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
5164 cataattatatcaaattcaattcatcaacatctta--tgtatacaaacattcttcaagtaatgtataaacattataacacatcttaatcaacaacaacat 5067  T
101 atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa 200  Q
    || |||||||| |||||| |||||| ||||||| ||| | || ||||||| |||||||||||||||||||||||| | |||||| ||||||||| |||||    
5066 attttattcagtttcacatattataattaaccttattattaaatcttaatcctacccaagggttcaactctcgacaactcgtgcaacaaaggtctcaaaa 4967  T
201 tccaacaagtcactctgtttctcggtcactcgcgaggcgaga 242  Q
    ||||| ||||||||||||||||  ||||||||||||||||||    
4966 tccaataagtcactctgtttctgtgtcactcgcgaggcgaga 4925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 159; Significance: 9e-85; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 32152 - 32395
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat 100  Q
    |||||| ||||||| |||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||    
32152 cataataatatcaatttcaattcatcaacatcttag--gtatacaaatattcttcaagtaatgcataaacattatatcacatcataatcaacaacgacat 32249  T
101 atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa 200  Q
    ||||||| ||||||||||||||||| ||||||||||| | |||||||||| |||||||||||||||||||||||| | | | || |||||||||||||||    
32250 atcttatacagcttcacagattataattaacctcattgttaagtcttaatcctacccaagggttcaactctcgacaactagagcaacaaaggtcgcaaaa 32349  T
201 tccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    || || |||| ||||||||||| |||||||||||||||||||||||    
32350 tcaaaaaagtaactctgtttctgggtcactcgcgaggcgagagcct 32395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 8 - 246
Target Start/End: Original strand, 13590 - 13826
Alignment:
8 atatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttat 107  Q
    ||||||| ||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||    
13590 atatcaatttcgattcatcaacatctta--tgtatacaaacattcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttat 13687  T
108 tcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaaca 207  Q
     ||||||||||||||||| ||||||||||| | |||||||||| ||||| || ||||||||||||||| | |||||| ||||| ||||||||||| ||||    
13688 acagcttcacagattataattaacctcattgttaagtcttaatcctaccgaaaggttcaactctcgacaactcgtgcaacaaaagtcgcaaaatctaaca 13787  T
208 agtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||||||||||||||| |||| ||||||||||||||||||    
13788 agtcactctgtttctgggtcgctcgcgaggcgagagcct 13826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 10459 - 10216
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat 100  Q
    |||||| ||||||| ||||||||| ||||||||||   ||||||||| |||||||||||||||||||| ||||||| ||||||||||||| |||| ||||    
10459 cataataatatcaatttcaattcaacaacatcttaa--gtatacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacgacat 10362  T
101 atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa 200  Q
    ||||||| ||||||||||||||||| ||||||| ||| | ||||||||||||||||||||||||||||||||||| | |||||| |||| ||||||||||    
10361 atcttatacagcttcacagattataattaaccttattattaagtcttaattctacccaagggttcaactctcgacaactcgtgcaacaatggtcgcaaaa 10262  T
201 tccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    || ||||||||||||||||||| |||||||||||||||||||||||    
10261 tctaacaagtcactctgtttctgggtcactcgcgaggcgagagcct 10216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 151; Significance: 5e-80; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 15498 - 15255
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat 100  Q
    |||||| ||||||| ||||||||||||||||||||  |||||| ||| ||||||||||||||||||||| |||||| ||||||||||||| |||||||||    
15498 cataataatatcaatttcaattcatcaacatctta--tgtataaaaatattcttcaagtaatgcataaatattatatcacatcataatcatcaacaacat 15401  T
101 atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa 200  Q
    ||||||| ||||||||||||||||| ||||||| ||| | |||||||||| |||||||| |  |||||||||||| | |||||| |||||||||||||||    
15400 atcttatacagcttcacagattataattaaccttattattaagtcttaatcctacccaacgagtcaactctcgacaactcgtgcaacaaaggtcgcaaaa 15301  T
201 tccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    || ||||||||||||||||||| |||||||||||||||||||||||    
15300 tctaacaagtcactctgtttctgggtcactcgcgaggcgagagcct 15255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 7378 - 7465
Alignment:
2 ataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaac 92  Q
    ||||||||| ||||||||||||||||||||||||  |||||||||  | ||||||||||||||||||||||||||| |||||||| |||||    
7378 ataattata-caaattcaattcatcaacatctta--tgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaac 7465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 141; Significance: 5e-74; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 19 - 246
Target Start/End: Complemental strand, 21292985 - 21292760
Alignment:
19 aattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagcttcaca 118  Q
    ||||||||||||||||||  ||||||||  |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| || |||||||    
21292985 aattcatcaacatcttag--gtatacaattattcttcaagtaatgcataaacattatatcacatcataatcatcaacaacatatcttatacaacttcaca 21292888  T
119 gattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgt 218  Q
    ||||||| ||||||||||| | |||||||||| |||||||||||| |||||| |||| | |||||| ||||||||||||||||| || |||||||||| |    
21292887 gattataattaacctcattattaagtcttaatcctacccaagggtccaactcccgacaactcgtgcaacaaaggtcgcaaaatctaaaaagtcactctat 21292788  T
219 ttctcggtcactcgcgaggcgagagcct 246  Q
    |||| |||||||||||||||||||||||    
21292787 ttctgggtcactcgcgaggcgagagcct 21292760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 8286876 - 8286632
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||| | |||||||||||||||||| ||  |  |||||||||||||||||||||| | ||||||||| |||||||||||||||| |||||    
8286876 cataataatatcaattgcaattcatcaacatcttaaat--aatcaaacattcttcaagtaatgcacataacattatatcacatcataatcaacatcaaca 8286779  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||  |||||||||| | |||| ||||| || |  | |||||||||| |||||||| |||||||||||| || | ||  || ||||||||||||||    
8286778 catcttaaacagcttcacataatataattaacatcttcattaagtcttaatactacccaaaggttcaactctcaacaactcaagcaacaaaggtcgcaaa 8286679  T
200 atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||| ||||||||||||||||||| |||||||||||||||||||||||    
8286678 atctaacaagtcactctgtttctgggtcactcgcgaggcgagagcct 8286632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 23390530 - 23390286
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||| | |||||||||||||||||| ||  || |||| ||||||||||||||||| | ||||||||| |||||||||||||||| |||||    
23390530 cataataatatcaattgcaattcatcaacatcttaaat--attcaaatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaaca 23390433  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||   |||||||||||||||| ||||| || |  | |||||||||| ||| || | ||||||||||||||| | |||||| ||||||||| ||||    
23390432 catcttaaatagcttcacagattataattaacatcctcattaagtcttaatactatcccaaggttcaactctcgacaactcgtgcaacaaaggtcacaaa 23390333  T
200 atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||| |||||| ||||||||||   ||||||||| ||||||| |||||    
23390332 atctaacaaggcactctgttttagggtcactcgtgaggcgatagcct 23390286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 22075106 - 22075350
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaa-cattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||| | ||||||| |||||||||| ||  || |||| | |  |||||||||||||||| ||||||| ||||||||||||||||||||||    
22075106 cataataatatcaattgcaattcaacaacatcttaaat--attcaaataattctcaagtaatgcataaaacattatatcacatcataatcaacaacaaca 22075203  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||  |||||||||| |||||| |||||||| |  | |||||||||| |||||||| |||| ||  ||| || | |||||| ||||||||||||||    
22075204 catcttaaacagcttcacatattataattaacctcttcattaagtcttaatgctacccaaaggtttaatcctcaacaactcgtgcaacaaaggtcgcaaa 22075303  T
200 atccaacaagtcactctg-tttctcggtcactcgcgaggcgagagcct 246  Q
    | | |||||||||||||| ||||| |||||||||||||||||||||||    
22075304 a-ctaacaagtcactctgttttctgggtcactcgcgaggcgagagcct 22075350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 52 - 246
Target Start/End: Original strand, 25421668 - 25421864
Alignment:
52 cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat 150  Q
    |||||||||||||| | ||||||||| |||||||||||||||| ||||  ||||||  ||||||||||||||||| ||||| ||||  | |||||| |||    
25421668 cttcaagtaatgcacataacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacagattataattaacatcatcattaagtctcaat 25421767  T
151 tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
     |||||| | |||||||||||| || | |||||| |||||||||||||||||| |||||| ||||| |||||| |||||||||||||||||||||||    
25421768 gctaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactcggtttctaggtcactcgcgaggcgagagcct 25421864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 68 - 246
Target Start/End: Original strand, 13025463 - 13025642
Alignment:
68 aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaa 167  Q
    ||||||||| |||||| ||||||||| ||||||||||||  || ||||||| |||||| ||||| ||||  | |||||||||| |||||| | |||||||    
13025463 aacattatatcacatcgtaatcaacatcaacatatcttaaacaacttcacatattataattaacatcatcattaagtcttaatactaccccaaggttcaa 13025562  T
168 ctctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||||| || |||||||| ||||||||||||||| || ||||||||||||||||||| |||||||||||||||||| ||||    
13025563 ctctcaacaaatcgtgcaacaaaggtcgcaaaaacctaacaagtcactctgtttctaggtcactcgcgaggcgagggcct 13025642  T

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Target: chr5; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 68 - 246
Target Start/End: Original strand, 13095647 - 13095826
Alignment:
68 aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaa 167  Q
    ||||||||| |||||| ||||||||| ||||||||||||  || ||||||| |||||| ||||| ||||  | |||||||||| |||||| | |||||||    
13095647 aacattatatcacatcgtaatcaacatcaacatatcttaaacaacttcacatattataattaacatcatcattaagtcttaatactaccccaaggttcaa 13095746  T
168 ctctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||||| |||| |||||| ||||||||||||||| || ||||||||||||||||||| |||||||||||||||||| ||||    
13095747 ctctcaacgactcgtgcaacaaaggtcgcaaaaacctaacaagtcactctgtttctaggtcactcgcgaggcgagggcct 13095826  T

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Target: chr5; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 24493655 - 24493900
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||||| ||| ||| |||||||||| ||  || |||  || |||||||| ||||| | ||||||||| |||||||||||||||| |||||    
24493655 cataataatatcaaatgcaagtcaacaacatcttaaat--attcaattatacttcaagtgatgcacataacattatatcacatcataatcaacatcaaca 24493752  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
    |||||||   |||||||||||||||| ||||| ||||| | |||||||||| |||||| | |||||||||||| || | |||||| ||||||||||||||    
24493753 tatcttaaatagcttcacagattataattaacatcattattaagtcttaatactaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaa 24493852  T
200 atcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    | || |||||| |||||||||| | ||| |||| |||||||| |||||    
24493853 aacctaacaagacactctgtttatgggttactcacgaggcgaaagcct 24493900  T

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Target: chr5; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 24529307 - 24529552
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||||| ||| ||| |||||||||| || ||||||  |||   ||||||||||| || ||||||||| ||||||||| |||||| |||||    
24529307 cataatgatatcaaatgcaagtcaacaacatctta-at-tatacattcatatctcaagtaatgcttataacattatatcacatcatattcaacatcaaca 24529404  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||  ||||||||||||||||||||||| ||||  | |||| | ||| |||||| | |||||||||||| || | | |||| ||||||||||||||    
24529405 catcttaaacagcttcacagattatagttaacatcatcattaagtttcaatactaccccaaggttcaactctcaactactagtgcaacaaaggtcgcaaa 24529504  T
200 atcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    | || |||||| | |||||||||| |||||||||||||||||||||||    
24529505 aacctaacaagactctctgtttctgggtcactcgcgaggcgagagcct 24529552  T

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Target: chr5; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 54 - 246
Target Start/End: Original strand, 9078090 - 9078284
Alignment:
54 tcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattc 152  Q
    ||||||||||| || ||||||||| |||||||||||||||| ||||| ||||||  ||||||||||||||||| ||||| ||||  | |||||| ||| |    
9078090 tcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagtctcaatac 9078189  T
153 tacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||||| | |||||||| ||  || | | |||||||| || ||||||||||| |||||| |||||||||||| |||||||||||||||||||||||    
9078190 taccccaaggttcaacccttaacaacttgtgcgacacagatcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcct 9078284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 54 - 246
Target Start/End: Complemental strand, 21986130 - 21985936
Alignment:
54 tcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattc 152  Q
    |||||||||||||| |||||| || ||| ||||| |||||| ||||| ||||||  || ||||||| |||||||||||| ||||  |||||||| ||| |    
21986130 tcaagtaatgcatataacattttatcacctcatattcaacatcaacacatcttaaacaacttcacaaattatagttaacatcatcatcaagtctgaatac 21986031  T
153 tacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||||| | |||||||||||| || | |||||| ||||||||||||||| || |||||| |||||||||||| |||||||||||||||||| ||||    
21986030 taccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaacaagacactctgtttctgggtcactcgcgaggcgagggcct 21985936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 53 - 246
Target Start/End: Complemental strand, 22107357 - 22107163
Alignment:
53 ttcaagtaatgcataa-acattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaatt 151  Q
    |||||||||||||||| | |||||| |||||||||||||||||||||| | ||||  ||||||||||||||||| |||||||| |  | ||||||||||     
22107357 ttcaagtaatgcataatatattatatcacatcataatcaacaacaacacaccttaaacagcttcacagattataattaacctcttcattaagtcttaata 22107258  T
152 ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||| ||| |||||| ||||| || | |||||| |||||||||||||| |   ||||| |||||| ||||  |||||||||||||||||||||||    
22107257 ctactcaaaggttcatctctcaacaactcgtgcaacaaaggtcgcaaagtatcacaaggcactctatttccgggtcactcgcgaggcgagagcct 22107163  T

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Target: chr5; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 52 - 246
Target Start/End: Original strand, 25431530 - 25431726
Alignment:
52 cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat 150  Q
    |||||||||||||| | ||||||||| |||||||||||||||| ||||  ||||||  ||||||||||||||||| ||||| ||||  | |||||| |||    
25431530 cttcaagtaatgcacataacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacagattataattaacatcatcattaagtctcaat 25431629  T
151 tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
     |||||  | |||||||||||| || | |||||  |||||||||||||||||| |||||| |||||  ||||| |||||||||||||| ||||||||    
25431630 gctacctcaaggttcaactctcaacaactcgtgtaacaaaggtcgcaaaatcctaacaaggcactcgatttctgggtcactcgcgaggtgagagcct 25431726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 18770024 - 18769910
Alignment:
14 aattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagct 113  Q
    ||||||||||||||||||||||  |||||||||  | ||||||||||||||||||||||||||| |||||||| ||||||  ||||| || || ||||||    
18770024 aattcaattcatcaacatctta--tgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaacacaaacatctcata-tcagct 18769928  T
114 tcacagattatagttaac 131  Q
    |||||||||  |||||||    
18769927 tcacagattgcagttaac 18769910  T

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Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 22032415 - 22032529
Alignment:
14 aattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagct 113  Q
    ||||||||||||||||||||||  |||||||||  | ||||||||||||||||||||||||||| |||||||| ||||||  ||||| || || ||||||    
22032415 aattcaattcatcaacatctta--tgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaacacaaacatctcgta-tcagct 22032511  T
114 tcacagattatagttaac 131  Q
    |||||||||  |||||||    
22032512 tcacagattgcagttaac 22032529  T

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Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 1096554 - 1096799
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||||| ||| ||| |||||||| | ||  |||||  |||  ||||||||||||||| ||||||||| |||||||||||||||| ||||     
1096554 cataataatatcaaatgcaaatcaacaacatctcacat--atacattcataattcaagtaatgcatataacattatatcacatcataatcaacatcaacg 1096651  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||  |||||||| || ||||| ||||| || |  | |||||| ||| |||||| | ||| ||||| |  || | | |||||||| || |||||||    
1096652 catcttaaacagcttcataggttataattaacatcctcattaagtctcaatactaccccaaggtccaacttttaacaacttgtgcgacagagatcgcaaa 1096751  T
200 atcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    || | || ||| || ||||||||| |||||||||||||||||||||||    
1096752 attctaaaaaggcattctgtttctgggtcactcgcgaggcgagagcct 1096799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 23572178 - 23572254
Alignment:
14 aattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaac 92  Q
    ||||||||||||||||||||||  |||||||||  | ||||||||||||||||||||||||||| ||||||||||||||    
23572178 aattcaattcatcaacatctta--tgtatacaattaatcttcaagtaatgcataaacattataatacatcataatcaac 23572254  T

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Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 246
Target Start/End: Complemental strand, 36154712 - 36154617
Alignment:
152 ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc--aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||||| | |||||||||||| |||| ||||||||||||| |||||||||||  |||||| || |||||   | |||||||||||||||||||||||    
36154712 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattctgtaaataggtcactcgcgaggcgagagcct 36154617  T

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Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 130
Target Start/End: Original strand, 22412337 - 22412388
Alignment:
79 acatcataatcaacaacaacatatcttattcagcttcacagattatagttaa 130  Q
    ||||||||||||||| ||||| ||||||  ||||||||||||||||| ||||    
22412337 acatcataatcaacatcaacacatcttaaacagcttcacagattataattaa 22412388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 133; Significance: 3e-69; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 3 - 246
Target Start/End: Complemental strand, 20698467 - 20698226
Alignment:
3 taattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacatat 102  Q
    |||| ||||||| | |||||||||||||||||| ||  || |||| |||||||||||||||||||||||||||| |||||||||||||||  ||||| ||    
20698467 taataatatcaattgcaattcatcaacatcttatat--attcaaatattcttcaagtaatgcataaacattatatcacatcataatcaacttcaacacat 20698370  T
103 cttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatc 202  Q
    |||   ||||||||||||||||| ||||| ||||  | |||||||||||||| |||| ||||||||||||||| | |||||| |||||||||||||||||    
20698369 cttgaacagcttcacagattataattaacatcatcattaagtcttaattctatccaaaggttcaactctcgacaactcgtgccacaaaggtcgcaaaatc 20698270  T
203 caacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
     ||||||||||||||||||| |||||||||||||||||||||||    
20698269 taacaagtcactctgtttctgggtcactcgcgaggcgagagcct 20698226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 13442361 - 13442605
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||| | |||||||||||||||||| ||  || |||| ||||||||||||||||| | ||||||||| |||||||||||||||| |||||    
13442361 cataataatatcaattgcaattcatcaacatcttaaat--attcaaatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaaca 13442458  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaat-tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaa 198  Q
     ||||||  ||||||||||||||||| ||||| ||||  | |||||||||| ||  ||||||| ||||||||||||| | |||||| |||||||||||||    
13442459 catcttaaacagcttcacagattataattaacatcatcattaagtcttaatgtcatcccaagg-ttcaactctcgacaactcgtgcaacaaaggtcgcaa 13442557  T
199 aatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||| |||||| |||||||||||| |||||||||||||||||||||||    
13442558 aatctaacaaggcactctgtttctgggtcactcgcgaggcgagagcct 13442605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 17487943 - 17488188
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||| | |||||||||||||||||| ||  || |||| ||||||||||||||||||| ||||||||| |||||||||||||||| |||||    
17487943 cataataatatcaattgcaattcatcaacatcttaaat--attcaaatattcttcaagtaatgcatataacattatatcacatcataatcaacatcaaca 17488040  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||  ||| ||||||||||||| ||||| ||||  | |||||||||| ||| || | ||||||||||||||| | |||||| ||||||||||||||    
17488041 catcttaaacagattcacagattataattaacatcatcattaagtcttaatgctatcccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaa 17488140  T
200 atccaacaagtcactctg-tttctcggtcactcgcgaggcgagagcct 246  Q
    ||| |||||| ||||||| ||||| |||||||||||||||||||||||    
17488141 atctaacaaggcactctgttttctaggtcactcgcgaggcgagagcct 17488188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 17499425 - 17499670
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||| | |||||||||||||||||| ||  || |||| ||||||||||||||||||| ||||||||| ||||||| |||||||| |||||    
17499425 cataataatatcaattgcaattcatcaacatcttaaat--attcaaatattcttcaagtaatgcatataacattatatcacatcaaaatcaacatcaaca 17499522  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||  ||| |||||| |||||| ||||| ||||  | |||||||||| ||| || | ||||||||||||||| | |||||| ||||||||||||||    
17499523 catcttaaacagattcacaaattataattaacatcatcattaagtcttaatgctatcccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaa 17499622  T
200 atccaacaagtcactctg-tttctcggtcactcgcgaggcgagagcct 246  Q
    ||| |||||| ||||||| ||||| ||||||| | |||||||||||||    
17499623 atctaacaaggcactctgttttctaggtcactagagaggcgagagcct 17499670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 52 - 246
Target Start/End: Complemental strand, 14576818 - 14576622
Alignment:
52 cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat 150  Q
    |||||||||||||||| ||||||||| |||||||||||||||| ||||| ||||||  || |||||||||||||| ||||| ||||  | || |||||||    
14576818 cttcaagtaatgcatataacattatatcacatcataatcaacatcaacacatcttaaacaacttcacagattataattaacatcatcattaaatcttaat 14576719  T
151 tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
     |||||| | |||||||||||| || | |||||| |||||||||||||||||| |||||| |||| ||||||| |||||||||||||||||||||||    
14576718 actaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactttgtttctaggtcactcgcgaggcgagagcct 14576622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 54 - 246
Target Start/End: Original strand, 18438672 - 18438866
Alignment:
54 tcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattc 152  Q
    |||||||||||||| ||||||||| ||||||||| |||||| ||||| ||||||  ||||||||||||||||||||||| ||||  | |||||| ||| |    
18438672 tcaagtaatgcatataacattatatcacatcatattcaacatcaacacatcttaaacagcttcacagattatagttaacatcatcattaagtctcaatac 18438771  T
153 tacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||||| | |||||||| ||| || | |||||| ||||||||||||||| || |||||| |||||||||||| |||||||||||||||||||||||    
18438772 taccccaaggttcaacactcaacaactcgtgcaacaaaggtcgcaaaaacctaacaagacactctgtttctgggtcactcgcgaggcgagagcct 18438866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 55 - 246
Target Start/End: Complemental strand, 40213703 - 40213510
Alignment:
55 caagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattct 153  Q
    |||||||||| || ||||||||| |||||||||||||||| ||||| ||||||  |||||| |||||||||| ||||| ||||  | |||||| ||| ||    
40213703 caagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagctttacagattataattaacatcatcattaagtctcaatact 40213604  T
154 acccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||| | |||| ||||||| || | |||||| |||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||    
40213603 accccaaggttaaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcct 40213510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 52 - 246
Target Start/End: Original strand, 26687023 - 26687218
Alignment:
52 cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat 150  Q
    |||||||||||||| | ||||||||| |||| ||||||||||| ||||| ||||||  ||||||||||||||||| ||||| || |  | |||||  |||    
26687023 cttcaagtaatgcacataacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcattaagtcccaat 26687122  T
151 tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
     |||||| |  ||||||||||| |||| |||||| |||||||||| |||| | |||||| |||||||||||| |||||||||||||||||||||||    
26687123 actaccccaaagttcaactctcaacgattcgtgcaacaaaggtcgtaaaacctaacaagacactctgtttctgggtcactcgcgaggcgagagcct 26687218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 54 - 243
Target Start/End: Original strand, 16796685 - 16796875
Alignment:
54 tcaagtaatgcataaa-cattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattc 152  Q
    |||||||||||||||| ||||||| |||||||||||||| ||||||| ||||||  || ||||||| |||||| ||| |||| |  | |||||||||| |    
16796685 tcaagtaatgcataaaacattatatcacatcataatcaaaaacaacacatcttaaacaacttcacatattataattagcctcttcattaagtcttaatgc 16796784  T
153 tacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagag 243  Q
    ||||||| |||||||||||  || | |||||| |||||||||||||| ||  ||||| |||||||||||  ||||||||||||||||||||    
16796785 tacccaaaggttcaactcttaacaattcgtgcaacaaaggtcgcaaagtctcacaaggcactctgtttccgggtcactcgcgaggcgagag 16796875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 12399296 - 12399537
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataa-acattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||||| ||||||| |||||||||| ||  || |||| | |  ||||||||||||||| |||||||| ||||||||||||||||||||||    
12399296 cataataatatcaaatgcaattcaacaacatcttaaat--attcaaataattctcaagtaatgcataagacattatatcacatcataatcaacaacaaca 12399393  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||   ||||||||||||||||||||||||| |  | | |||||||| |||||||| || | ||  | | || | |||||| |||||||||| |||    
12399394 catcttaaatagcttcacagattatagttaacctcttcattatgtcttaatgctacccaaaggcttaatccccaacaactcgtgcaacaaaggtcggaaa 12399493  T
200 atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    | | |||||||||  |||||||| ||||||||| |||||||||||||    
12399494 a-ctaacaagtca--ctgtttctgggtcactcgtgaggcgagagcct 12399537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 67 - 246
Target Start/End: Original strand, 14572740 - 14572920
Alignment:
67 aaacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttca 166  Q
    |||||||||| |||||||||| |||||  |||| ||||||  || ||||||| |||||| ||||| ||||  | |||||||||| |||||| | ||||||    
14572740 aaacattatatcacatcataaacaacataaacaaatcttaaacaacttcacaaattataattaacatcatcattaagtcttaatactaccccaaggttca 14572839  T
167 actctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||||| || | |||||| ||||||||||||||| || ||||||  ||||||||||| |||||||||||||||||||||||    
14572840 actctcaacaactcgtgcaacaaaggtcgcaaaaacctaacaaggtactctgtttctaggtcactcgcgaggcgagagcct 14572920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 14972941 - 14973186
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||||| ||| ||| |||||||| | ||  |||||  |||  ||||||||||||||| ||||||||| |||||||||||||||| |||||    
14972941 cataataatatcaaatgcaaatcaacaacatctcatat--atacattcataattcaagtaatgcatataacattatatcacatcataatcaacatcaaca 14973038  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||  |||||||| |||||||| ||||| ||||  | |||||| ||| |||||| | |||||||||||   | | | |||||||| |  |||||||    
14973039 catcttaaacagcttcatagattataattaacatcatcattaagtctcaatactaccccaaggttcaactcttagcaacttgtgcgacacaaatcgcaaa 14973138  T
200 atcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||| |||||| |||||||||||| ||||||| |||||||||||||||    
14973139 atcctaacaaggcactctgtttctgggtcacttgcgaggcgagagcct 14973186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 25476419 - 25476174
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||||| ||| ||| |||||||| |   |||||||  |||  ||||||||||||  | ||||||||| |||||||| |||| || |||||    
25476419 cataataatatcaaatgcaagtcaacaacatctcaa--gtatacattcataattcaagtaatgcgcataacattatatcacatcattatcatcatcaaca 25476322  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||  |||||||||||||| || ||||| || |  | |||||| ||| |||||  | |||||||||||| || | |||||| ||||||||||||||    
25476321 catcttaaacagcttcacagattgtaattaacatcctcattaagtctcaatactacctcaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaa 25476222  T
200 atcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||| |||||| |||||||||||| |||||||||||||||||||||||    
25476221 atcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcct 25476174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 53 - 246
Target Start/End: Complemental strand, 11424747 - 11424552
Alignment:
53 ttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaatt 151  Q
    |||||||||||| || ||||||||| |||||||||| ||||  ||||| ||||||  ||||||||||||||| | ||||| |||   | |||||| |||     
11424747 ttcaagtaatgcgtataacattatatcacatcataaacaacttcaacacatcttaaacagcttcacagattaaaattaacatcaacattaagtctcaata 11424648  T
152 ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||||| |  ||||||||||| || | |||||| ||||||||||||||| || |||||| |||||||||||| |||| ||||||||||||||||||    
11424647 ctaccccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaacaagacactctgtttctaggtcgctcgcgaggcgagagcct 11424552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 52 - 246
Target Start/End: Complemental strand, 23083346 - 23083151
Alignment:
52 cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat 150  Q
    |||| ||||||||| | ||||||||| |||||||||||||| | ||||| ||||||  |||||||||||||| || ||||| ||||    ||||||||||    
23083346 cttctagtaatgcacataacattatatcacatcataatcaatatcaacacatcttaaacagcttcacagattgtaattaacatcatcactaagtcttaat 23083247  T
151 tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
     |||||  | |||||||||||  || | |||||| ||||||||||||||| | |||||| |||| ||||||| ||||| |||||||||||||||||    
23083246 actacctcaaggttcaactctgaacaactcgtgcaacaaaggtcgcaaaacctaacaagacactatgtttctgggtcattcgcgaggcgagagcct 23083151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 52 - 246
Target Start/End: Original strand, 43841068 - 43841263
Alignment:
52 cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat 150  Q
    |||||||||||||| | ||||||||| |||| ||||||||||| ||||| ||||||  ||||||||||||||||| ||||| || |  | |||||  |||    
43841068 cttcaagtaatgcacataacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcgttaagtcccaat 43841167  T
151 tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
     |||||| |  ||  ||||||| || | |||||  ||||||||||||||| | |||||| |||||||||||| |||||||||||||||||| ||||    
43841168 actaccccaaagtcaaactctcaacaactcgtgtaacaaaggtcgcaaaacctaacaagacactctgtttctgggtcactcgcgaggcgagggcct 43841263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 52 - 246
Target Start/End: Original strand, 30029975 - 30030170
Alignment:
52 cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat 150  Q
    |||||||||||| | | ||||||||| ||||||||||||||   ||| | ||||||  |||||||||| |||||| | ||| ||||  | |||||||||     
30029975 cttcaagtaatgtacacaacattatatcacatcataatcaatgtcaaaacatcttaaacagcttcacatattatattaaacatcatcattaagtcttaaa 30030074  T
151 tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcgg-tcactcgcgaggcgagagcct 246  Q
     |||||||| ||||||||||||||| | |||||| ||||||||||||||||| |||||| || |||| |||| || | |||||||||||||||||||    
30030075 gctacccaaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaaggcattctg-ttctgggattactcgcgaggcgagagcct 30030170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 14179570 - 14179648
Alignment:
54 tcaagtaatgcataaa-cattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaac 131  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||| ||||||  ||||||||||||||||| |||||    
14179570 tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaac 14179648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 53 - 203
Target Start/End: Original strand, 42386547 - 42386699
Alignment:
53 ttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttatt-cagcttcacagattatagttaacctcattctcaagtcttaat 150  Q
    |||||| |||||||| ||||||||| |||||||||||||||| ||| | ||||||   ||||||||||||||||  ||||| ||||   ||||||  |||    
42386547 ttcaagcaatgcatataacattatatcacatcataatcaacatcaaaacatcttaaaacagcttcacagattatcattaacatcataaacaagtcccaat 42386646  T
151 tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc 203  Q
     |||||| | |||||||||| | || | ||||||||||||| |||||||||||    
42386647 actaccccaaggttcaactcacaacaactcgtgcgacaaagttcgcaaaatcc 42386699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 24153243 - 24153115
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||||| ||| ||| |||||||||| ||  || |||  || |||||| ||||||| | ||||| ||| |||||||||||||||| |||||    
24153243 cataataatatcaaatgcaagtcaacaacatcttaaat--attcaattatacttcaaataatgcacataacataatatcacatcataatcaacatcaaca 24153146  T
100 tatcttattcagcttcacagattatagttaa 130  Q
     ||||||  ||||||||||||||||| ||||    
24153145 catcttaaacagcttcacagattataattaa 24153115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 856234 - 856348
Alignment:
14 aattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagct 113  Q
    ||||||||||| ||||||||||  |||||||||  | |||||||||||| |||||||||||||| |||||||| || |||  ||||| || || | ||||    
856234 aattcaattcaacaacatctta--tgtatacaattaatcttcaagtaatacataaacattataatacatcatattcgacacaaacatctcata-taagct 856330  T
114 tcacagattatagttaac 131  Q
    |||||||||  |||||||    
856331 tcacagattgcagttaac 856348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 246
Target Start/End: Complemental strand, 17248161 - 17248075
Alignment:
161 ggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc--aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||| ||||||| |||| ||||||||||||| ||||||||| |  |||||| || |||||  || |||||||||||||||||||||||    
17248161 ggtttaactctcaacgactcgtgcgacaaagatcgcaaaattctaaacaag-cattctgtaactgggtcactcgcgaggcgagagcct 17248075  T

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Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 53070582 - 53070531
Alignment:
152 ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc 203  Q
    |||||| | |||||||||||| |||| ||||||||||||| |||||||||||    
53070582 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcc 53070531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 1082 - 839
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat 100  Q
    |||||| ||||||| | |||||||||||||||||| ||  || |||| ||| |||||||||||||||||||||||| ||||||||||||||| | ||||     
1082 cataataatatcaattgcaattcatcaacatcttaaat--attcaaatattattcaagtaatgcataaacattatatcacatcataatcaaccaaaacac 985  T
101 atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa 200  Q
    ||||||  |||||||| |||||||| |||||||| |  | |||||||||| |||||||| ||||||||||||||| | |||||| |||||||||||||||    
984 atcttaaacagcttcaaagattataattaacctcttcattaagtcttaatgctacccaaaggttcaactctcgacaattcgtgcaacaaaggtcgcaaaa 885  T
201 tccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    || ||||||||||||||||||| |||||||||||||||||||||||    
884 tctaacaagtcactctgtttctgggtcactcgcgaggcgagagcct 839  T

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Target: scaffold0011 (Bit Score: 131; Significance: 4e-68; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 168012 - 167769
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat 100  Q
    |||||| ||||||| | |||||||||||||||||| ||  || |||| ||| |||||||||||||||||||||||| ||||||||||||||| | ||||     
168012 cataataatatcaattgcaattcatcaacatcttaaat--attcaaatattattcaagtaatgcataaacattatatcacatcataatcaaccaaaacac 167915  T
101 atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa 200  Q
    ||||||  |||||||| |||||||| |||||||| |  | |||||||||| |||||||| ||||||||||||||| | |||||| |||||||||||||||    
167914 atcttaaacagcttcaaagattataattaacctcttcattaagtcttaatgctacccaaaggttcaactctcgacaattcgtgcaacaaaggtcgcaaaa 167815  T
201 tccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    || ||||||||||||||||||| |||||||||||||||||||||||    
167814 tctaacaagtcactctgtttctgggtcactcgcgaggcgagagcct 167769  T

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Target: scaffold0011; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 52 - 246
Target Start/End: Original strand, 52049 - 52243
Alignment:
52 cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat 150  Q
    |||||||||||||| | ||||||||| |||| ||||||| ||| ||||| ||||||  ||||||||||||||||| ||||| ||||  | ||||||||||    
52049 cttcaagtaatgcacataacattatatcacaacataatctacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagtcttaat 52148  T
151 tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
     |||||| | |||||||||||| || | |||||| || |||||||||||| | |||||| ||||| |||||| |||||||||||||||||||||||    
52149 actaccccaaggttcaactctcaacaactcgtgcaac-aaggtcgcaaaacctaacaagacactcagtttctgggtcactcgcgaggcgagagcct 52243  T

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Target: scaffold0064 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 47080 - 47317
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat 100  Q
    |||||| ||||||| ||||||||||||||||||||  |||||||||| ||||| |||||||||||||||||||||| |||||||||| || |||||||||    
47080 cataataatatcaatttcaattcatcaacatctta--tgtatacaaatattctccaagtaatgcataaacattatatcacatcataaacatcaacaacat 47177  T
101 atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa 200  Q
    ||||||| |||||||||||||||||      |||||| | |||||||||| |||||||||||||||||||||||| | |||||| ||||||||||| |      
47178 atcttatacagcttcacagattata------ctcattgttaagtcttaatcctacccaagggttcaactctcgacaactcgtgcaacaaaggtcgccatt 47271  T
201 tccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    || |||||||||||||| || | |||||||||||||||||||||||    
47272 tctaacaagtcactctggttttgggtcactcgcgaggcgagagcct 47317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 124; Significance: 7e-64; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 23 - 267
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat 100  Q
    ||||| || ||||| | ||||||||||| ||||||  |||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||    
23 cataaatacatcaattgcaattcatcaaaatctta--tgtatacaaatattcttcaagtaaggcataaacattatatcacatcataatcaacaacaacat 120  T
101 atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgc-aaa 199  Q
    ||||||| || |||||||||||||| ||||||||||| | |||||||||| |||||||| ||||||||| ||||| | |||||| |||||||| || |||    
121 atcttatacaacttcacagattatacttaacctcattgttaagtcttaatcctacccaaaggttcaactgtcgacaactcgtgcaacaaaggttgcaaaa 220  T
200 atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||| |||||||||||||  || | ||||||| |||||||||||||||    
221 atctaacaagtcactcttattatgggtcacttgcgaggcgagagcct 267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 4799 - 5043
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat 100  Q
    ||||| || ||||| | ||||||||||| ||||||  |||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||    
4799 cataaatacatcaattgcaattcatcaaaatctta--tgtatacaaatattcttcaagtaaggcataaacattatatcacatcataatcaacaacaacat 4896  T
101 atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgc-aaa 199  Q
    ||||||| || |||||||||||||| ||||||||||| | |||||||||| |||||||| ||||||||| ||||| | |||||| |||||||| || |||    
4897 atcttatacaacttcacagattatacttaacctcattgttaagtcttaatcctacccaaaggttcaactgtcgacaactcgtgcaacaaaggttgcaaaa 4996  T
200 atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||| |||||||||||||  || | ||||||| |||||||||||||||    
4997 atctaacaagtcactcttattatgggtcacttgcgaggcgagagcct 5043  T

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Target: scaffold0490 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 2039 - 2283
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaa-cattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||| | ||||||| |||||||||| ||  || |||||||| ||||||||||||||||| ||||||| | ||||||||||||||||||||    
2039 cataatgatatcaattgcaattcaacaacatcttaaat--attcaaacattattcaagtaatgcataaaacattatatctcatcataatcaacaacaaca 2136  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
    |||| ||| |||||| ||| |||||   |||||| ||  | |||||||||| |||||||| ||||||||||||||| | |||||| ||||||||||||||    
2137 tatcatatacagctttacatattattaataaccttatcattaagtcttaatcctacccaaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaa 2236  T
200 atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||| |||| |||||||||||||| |||||||||||||||||||||||    
2237 atctaacatgtcactctgtttctaggtcactcgcgaggcgagagcct 2283  T

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Target: scaffold0309 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 6697 - 6941
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaa-cattataacacatcataatcaacaacaaca 99  Q
    |||||| |||||||   ||||||| |||||||||| ||  || |||||||| ||||||||||||||||| | ||||| ||||||||||||||||||||||    
6697 cataatgatatcaatagcaattcaacaacatcttaaat--attcaaacattattcaagtaatgcataaaacgttatatcacatcataatcaacaacaaca 6794  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
    |||| ||| |||||| ||||||||||  |||||| ||  | || ||||||| |||||||| ||||||||||||||| | |||||| ||||||||||||||    
6795 tatcatatacagctttacagattataaataaccttatcattaaatcttaatcctacccaaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaa 6894  T
200 atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||| |||| |||||||||||| | |||||||||||||||||||||||    
6895 atctaacatgtcactctgtttatgggtcactcgcgaggcgagagcct 6941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 13298 - 13542
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||| | |||||||||||||||||| ||  || |||| ||||||||||||||||||| ||||||||| |||||||||||||||| |||||    
13298 cataataatatcaattgcaattcatcaacatcttaaat--attcaaatattcttcaagtaatgcatataacattatatcacatcataatcaacatcaaca 13395  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||  |||||||||| |||||| ||||| ||||  | |||||||||| ||| || | ||||||||| ||||| | |||||| ||||||||||||||    
13396 catcttaaacagcttcacaaattataattaacatcatcattaagtcttaatgctatcccaaggttcaactgtcgacaactcgtgcaacaaaggtcgcaaa 13495  T
200 atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||| |||||| ||||||| |||| |||||||||||||||||||||||    
13496 atctaacaaggcactctgattctaggtcactcgcgaggcgagagcct 13542  T

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Target: scaffold0021 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 8 - 246
Target Start/End: Original strand, 124679 - 124916
Alignment:
8 atatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatctta 106  Q
    ||||||| | |||||||||||| | ||| ||  || |||| ||||||||||||||||||| ||||||||| |||||||||||||||| ||||| ||||||    
124679 atatcaattgcaattcatcaacgttttaaat--attcaaatattcttcaagtaatgcatataacattatatcacatcataatcaacatcaacacatctta 124776  T
107 ttcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaac 206  Q
      ||||||||||||||||| ||||| || |  | |||||||||| ||| || | ||||||||||||||| | |||||| ||||||||||||||||| |||    
124777 aacagcttcacagattataattaacatcctcattaagtcttaatgctatcccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaac 124876  T
207 aagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||| |||||| ||||| |||||||||||||||||||||||    
124877 aagacactctttttctgggtcactcgcgaggcgagagcct 124916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 97; Significance: 9e-48; HSPs: 2)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 52 - 246
Target Start/End: Original strand, 38896 - 39092
Alignment:
52 cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat 150  Q
    |||||||||||||| | ||||||||| |||||||||||||||| ||||| ||||||  ||||||||||||||||| ||||| ||||  | ||||||||||    
38896 cttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagtcttaat 38995  T
151 tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
     |||||| | |||||||||||| || | |||||| ||||||||||||||| || ||||||||||| ||||||| |||||||||||||||||||||||    
38996 actaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaacaagtcactatgtttctgggtcactcgcgaggcgagagcct 39092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 125
Target Start/End: Original strand, 33077 - 33151
Alignment:
52 cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattata 125  Q
    |||||||||||||| | ||||||||| |||||||||||||||| ||||| ||||||  |||||||||||||||||    
33077 cttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattata 33151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 96; Significance: 3e-47; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 3557 - 3801
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||| | |||||||||||||||||| ||  || |||| ||||||||||||||||| | ||||||||| |||||||||||||||| |||||    
3557 cataataatatcaattgcaattcatcaacatcttaaat--attcaaatattcttcaagtaatgcaaataacattatatcacatcataatcaacatcaaca 3654  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||  |||||||| |||||||| ||||| || |  | |||||||||| |||||| |  |||||| |||| || | |||||| ||||||||||||||    
3655 catcttaaacagcttcatagattataattaacatcctcattaagtcttaatactaccccaaagttcaattctcaacaactcgtgcaacaaaggtcgcaaa 3754  T
200 atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    | | ||||| ||||||||||| | |||||||||||||||||||||||    
3755 acctaacaactcactctgtttttgggtcactcgcgaggcgagagcct 3801  T

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Target: scaffold0292; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 52 - 246
Target Start/End: Original strand, 478 - 674
Alignment:
52 cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat 150  Q
    |||||||||||||| | ||||||||| |||||||||||||||| ||||| ||||||  |||||||| | |||||| ||||| || |  | |||||| |||    
478 cttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcatatattataattaacatcctcattaagtctcaat 577  T
151 tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
     |||||| | |||||||||||| || | || ||| |||||||| |||||| || |||||| |||||||||||| |||||||||||||||||||||||    
578 actaccccaaggttcaactctcaacaactcatgcaacaaaggttgcaaaaacctaacaagacactctgtttctgggtcactcgcgaggcgagagcct 674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 8 - 246
Target Start/End: Complemental strand, 24329 - 24091
Alignment:
8 atatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataat-caacaacaacatatctt 105  Q
    ||||||| | |||||||||||||||||| ||  || |||| ||||||||||||||||| | ||||||||| ||||||||||| ||||| ||||| |||||    
24329 atatcaattgcaattcatcaacatcttaaat--attcaaatattcttcaagtaatgcacataacattatatcacatcataattcaacatcaacacatctt 24232  T
106 attcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaa 205  Q
    |  ||||||||||||||||| ||||| || |    |||||||||| ||| || |  |||||||||||||| | |||||| ||||||||||||||||| ||    
24231 aaacagcttcacagattataattaacatcctcaataagtcttaatactatcccaaagttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaa 24132  T
206 caagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||| |||| ||||||| |||||||||||||||||||||||    
24131 caaggcactttgtttctaggtcactcgcgaggcgagagcct 24091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 8 - 246
Target Start/End: Complemental strand, 6148 - 5911
Alignment:
8 atatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatctta 106  Q
    ||||||| | |||||||||||||||||| ||  || |||| ||||||||||||||||| | ||||||||| |||||||||||||||| ||||| ||||||    
6148 atatcaattgcaattcatcaacatcttaaat--attcaaatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatctta 6051  T
107 ttcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaac 206  Q
      ||||||||||  ||||| ||||| ||||  | |||||||||| ||| || | ||||| ||||||||  | |||||| ||||||||||||||||| |||    
6050 aacagcttcacattttataattaacatcatcattaagtcttaatgctatcccaaggttccactctcgataactcgtgcaacaaaggtcgcaaaatctaac 5951  T
207 aagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||| |||||||||||| |||||||  ||||||||||||||    
5950 aaggcactctgtttctgggtcactaacgaggcgagagcct 5911  T

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Target: scaffold0016 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 1938 - 2182
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||| | |||||||||||||||||| ||  || |||| ||||||||||||||||| | ||||||||| |||||||||||||||| |||||    
1938 cataataatatcaattgcaattcatcaacatcttaaat--attcaaatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaaca 2035  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||   |||||||||||||||| ||||| || |  | |||||||||| ||| || | ||||||||||||||| | |||||| ||||||||| ||||    
2036 catcttaaatagcttcacagattataattaacatcctcattaagtcttaatactatcccaaggttcaactctcgacaactcgtgcaacaaaggtcacaaa 2135  T
200 atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||| |||||| ||||||||||   ||||||||| ||||||| |||||    
2136 atctaacaaggcactctgttttagggtcactcgtgaggcgatagcct 2182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 20998 - 21242
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaa-cattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||| | ||||||| |||||||||| ||  || ||||  |||| ||||||||||||||| ||||||| ||||||||||||| || |||||    
20998 cataataatatcaattgcaattcaacaacatcttatat--attcaaatgttctacaagtaatgcataaaacattatatcacatcataatcagcatcaaca 21095  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||  ||||||||||| ||||| ||||| || |  | |||||||||| |||||||| |||||||||||   | | |||||| ||||||||||||||    
21096 catcttaaacagcttcacaggttataattaacatcttcattaagtcttaatactacccaaaggttcaactctgatcaactcgtgcaacaaaggtcgcaaa 21195  T
200 atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |  |||||||||||||||||| | |||||||| ||||||||||||||    
21196 actcaacaagtcactctgtttttgggtcactcacgaggcgagagcct 21242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 22969 - 23214
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||||| ||| ||| |||||||||| ||  || |||  || |||||||||||||| | ||||||||| |||||| ||||||||| |||||    
22969 cataataatatcaaatgcaagtcaacaacatcttaaat--attcaattatacttcaagtaatgcacataacattatatcacatcgtaatcaacatcaaca 23066  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||  |||||||||||||||||  |||| ||||  | |||||| ||| |||||| | |||||||||||| || | |||||| ||||||||||||||    
23067 catcttaaacagcttcacagattataaataacatcatcattaagtctcaatactaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaa 23166  T
200 atcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    | || |||||| |||||||||||| |||||||||||||||||| ||||    
23167 aacctaacaagacactctgtttctaggtcactcgcgaggcgagggcct 23214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 4936 - 5179
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaa-cattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||||| ||||||| ||||||||||   |||| |||| | |  |||||||||||||||| ||||||| ||||||||||||||||||||||    
4936 cataataatatcaaatgcaattcaacaacatcttaa--gtattcaaataattctcaagtaatgcataaaacattatatcacatcataatcaacaacaaca 5033  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||  |||||||||||||||||| ||||| | |  | |||||||| | ||| |||| |||| ||  ||| || | |||||| |||||||| |||||    
5034 catcttaaacagcttcacagattatagctaaccccttcattaagtcttattgctagccaaaggtttaatcctcaacaactcgtgcaacaaaggtggcaaa 5133  T
200 atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    | | ||||||||||||||||||| ||||||||||||||| |||||||    
5134 a-ctaacaagtcactctgtttctaggtcactcgcgaggcaagagcct 5179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 108 - 246
Target Start/End: Complemental strand, 11441 - 11303
Alignment:
108 tcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaaca 207  Q
    |||||||||||||||||| ||||||||||  | ||||||||||||||||||| |||||||||||| || | |||||| ||||||||||||||||| ||||    
11441 tcagcttcacagattataattaacctcatcattaagtcttaattctacccaaaggttcaactctctacaactcgtgcaacaaaggtcgcaaaatctaaca 11342  T
208 agtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||||||| |||||||  ||||||||||||| ||||||||    
11341 agtcactttgtttctgtgtcactcgcgaggtgagagcct 11303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 68 - 246
Target Start/End: Complemental strand, 339918 - 339740
Alignment:
68 aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaa 167  Q
    ||||||||| |||||||||||||||| ||||| ||||||  ||||||||||||||||| ||||| ||||  | |||||| ||| |||||| | |||||||    
339918 aacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacgtcatcattaagtctcaatactaccccaaggttcaa 339819  T
168 ctctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    | ||  |||| |||||| ||||||||||||||| | |||||| |||||| ||||| |||||||||||||||||||||||    
339818 cccttaacgactcgtgcaacaaaggtcgcaaaacctaacaaggcactctatttctgggtcactcgcgaggcgagagcct 339740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 54 - 246
Target Start/End: Original strand, 1052 - 1245
Alignment:
54 tcaagtaatgcataaa-cattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattc 152  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||| ||||||  || |||||||||||||| ||| |||| |  | |||||||||| |    
1052 tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacatcttcacagattataattagcctcttcattaagtcttaatac 1151  T
153 tacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||||||  ||||||||||| || | |||||| |||||||||||||| ||  ||||| |||| ||||||  ||||||||| |||||||||||||    
1152 tacccaaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaagtctcacaaggcactttgtttccgggtcactcgtgaggcgagagcct 1245  T

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Target: scaffold0165 (Bit Score: 77; Significance: 7e-36; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 78 - 246
Target Start/End: Original strand, 3644 - 3812
Alignment:
78 cacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacga 177  Q
    |||||||||||||||||||||| ||||||  ||||||||||||||||| ||| |||| |  | |||||||||| |||||||| |||||||||||| || |    
3644 cacatcataatcaacaacaacacatcttaaacagcttcacagattataattagcctcttcattaagtcttaatactacccaaaggttcaactctcaacaa 3743  T
178 atcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
     |||||| ||||||||| |||| ||  ||||| |||||||||||  ||||||||||||| |||||||||    
3744 ctcgtgcaacaaaggtcacaaagtctcacaaggcactctgtttccgggtcactcgcgagacgagagcct 3812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 78 - 246
Target Start/End: Original strand, 7708 - 7876
Alignment:
78 cacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacga 177  Q
    |||||||||||||||||||||| ||||||  ||||||||||||||||| ||| |||| |  | |||||||||| |||||||| |||||||||||| || |    
7708 cacatcataatcaacaacaacacatcttaaacagcttcacagattataattagcctcttcattaagtcttaatactacccaaaggttcaactctcaacaa 7807  T
178 atcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
     |||||| ||||||||| |||| ||  ||||| |||||||||||  ||||||||||||| |||||||||    
7808 ctcgtgcaacaaaggtcacaaagtctcacaaggcactctgtttccgggtcactcgcgagacgagagcct 7876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 39563 - 39808
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||||| ||| ||| |||||||| | ||  |||||  |||  ||||||||||||| | ||||||||| |||||||||||||||| |||||    
39563 cataataatatcaaatgcaagtcaacaacatctcaaat--atacattcataattcaagtaatgcacataacattatatcacatcataatcaacatcaaca 39660  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||  |||||||| |||||||| ||||| ||||| | |||||| ||| |||||| | |||||||| ||  || | | |||||||| || |||||||    
39661 catcttaaacagcttcatagattataattaacatcattattaagtctcaatactaccccaaggttcaacccttaacaacttgtgcgacacagatcgcaaa 39760  T
200 atcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||||  ||||| |||||||||||| |||||||||||||||||||||||    
39761 atcctgacaaggcactctgtttctgggtcactcgcgaggcgagagcct 39808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 52 - 246
Target Start/End: Original strand, 40048 - 40244
Alignment:
52 cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat 150  Q
    |||||||||||||| | ||||||||| |||||||||||||||| ||||| ||| ||   |||||||||||||||| ||||| ||||  | |||||| |||    
40048 cttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcataaagagcttcacagattataattaacatcatcattaagtctcaat 40147  T
151 tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa-atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
     |||||| | |||||||||||| || | |||||| |||||||||||||| | | ||||||  ||||||||||| |||||||||||||||||||||||    
40148 actaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaacacctaacaaggtactctgtttctgggtcactcgcgaggcgagagcct 40244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 75249 - 75004
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||||| ||| ||| |||||||| | ||  |||||  |||  ||||||||||||| | ||||||||| |||||||||||||||| |||||    
75249 cataataatatcaaatgcaagtcaacaacatctcaaat--atacattcataattcaagtaatgcacataacattatatcacatcataatcaacatcaaca 75152  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||  |||||||| |||||||| ||||| ||||| | |||||| ||| |||||| | |||||||| ||  || | | |||||||| || |||||||    
75151 catcttaaacagcttcatagattataattaacatcattattaagtctcaatactaccccaaggttcaacccttaacaacttgtgcgacacagatcgcaaa 75052  T
200 atcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||||  ||||| |||||||||||| |||||||||||||||||||||||    
75051 atcctgacaaggcactctgtttctgggtcactcgcgaggcgagagcct 75004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 68 - 246
Target Start/End: Complemental strand, 26033 - 25854
Alignment:
68 aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaa 167  Q
    ||||||||| |||||||||||||||| ||||| ||||||  |||||||| |||||||| ||||| ||||  | |||||| ||| |||||| | ||||||     
26033 aacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagattataattaacatcatcattaagtctcaatactaccccaaggttcag 25934  T
168 ctctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||||   | | |||||| |||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||    
25933 ctcttagcaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcct 25854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 68 - 246
Target Start/End: Complemental strand, 33463 - 33284
Alignment:
68 aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaa 167  Q
    ||||||||| |||||||||||||||| ||||  ||||||  |||||||| || ||||| ||||| ||||  | |||||| ||| |||||| | |||||||    
33463 aacattatatcacatcataatcaacatcaacgcatcttaaacagcttcataggttataattaacatcatcattaagtctcaatactaccccaaggttcaa 33364  T
168 ctctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||||  || | | ||  |||| || |||||||||||  ||||| |||||||||||| |||||| ||||||||||||||||    
33363 ctcttaacaacttgtatgacacagatcgcaaaatcctgacaaggcactctgtttctgggtcacacgcgaggcgagagcct 33284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 52 - 246
Target Start/End: Complemental strand, 51868 - 51674
Alignment:
52 cttcaagtaatgcataaacattataacacatcataa-tcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat 150  Q
    ||||||||||||| || |||||||| |||||||||| ||||||  || || || ||  |||||||||| ||| || ||||  ||||  ||||||||||||    
51868 cttcaagtaatgcgtatacattatatcacatcataaatcaacattaatatctcataa-cagcttcacaaattgtaattaatatcatattcaagtcttaat 51770  T
151 tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
     |||||| | ||||||||||||||| | |||||| ||||||||||||||||| ||||||||||||||||||| ||||||| |||||| ||||||||    
51769 gctaccccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcactagcgaggtgagagcct 51674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 109 - 246
Target Start/End: Original strand, 20597 - 20734
Alignment:
109 cagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaa 208  Q
    ||||||||||||||||||||||| ||||  | |||||||||| |||  | | ||||||||||||||| | |||||| ||||||||||||||||| |||||    
20597 cagcttcacagattatagttaacatcatcattaagtcttaatgctattccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaa 20696  T
209 gtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    | |||||||||||| |||| ||||||||||||||||||    
20697 ggcactctgtttctaggtcgctcgcgaggcgagagcct 20734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 27917 - 28162
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||||| ||| ||| |||||||| | ||  |||||  |||  ||||||||||||||| ||||||||| |||||||||||||||| |||||    
27917 cataataatatcaaatgcaagtcaacaacatctcaaat--atacattcataattcaagtaatgcatataacattatatcacatcataatcaacatcaaca 28014  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||  || |||||||| ||||| ||||| ||||  | |||||| ||| |||||| | |||||||||||  || | | |||||||| || | |||||    
28015 aatcttaaacaacttcacaggttataattaacatcatcattaagtctcaatactaccccaaggttcaactcttaacaacttgtgcgacacagattgcaaa 28114  T
200 atcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||||  ||||| |||||||||||| |||||||||||||||||||||||    
28115 atcctgacaaggcactctgtttctgggtcactcgcgaggcgagagcct 28162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 17249 - 17004
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||||| ||| ||| |||||||| |   |||||||  |||  |||||||||||| |  ||||||||| |||||||||||||||| |||||    
17249 cataataatatcaaatgcaagtcaacaacatctcaa--gtatacattcataattcaagtaatgcgtttaacattatatcacatcataatcaacatcaaca 17152  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
      |||||  |||||| |||||||||| ||||| ||||  | |||||| ||| |||||| | |||| ||||||| || | |||||| ||||||||||||||    
17151 cgtcttaaacagctttacagattataattaacatcatgattaagtctcaatactaccccaaggtttaactctcaacaactcgtgcaacaaaggtcgcaaa 17052  T
200 atcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||| || |||  ||||||||||| |||||||||||||||||||||||    
17051 atcctaataaggtactctgtttctgggtcactcgcgaggcgagagcct 17004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 52 - 246
Target Start/End: Original strand, 39993 - 40188
Alignment:
52 cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat 150  Q
    |||||||||||||||  ||||||||| |||||||||||||||| ||||  ||||||  |||||||||| |||||| ||||| || |  | |||||| |||    
39993 cttcaagtaatgcatttaacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaaattataattaacatcctcattaagtctcaat 40092  T
151 tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatc-caacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
     |||||||| |||||||||||| || ||| |||| |||||||||||||||||  |||||| ||||| |||||| |||||| ||||||||||||||||    
40093 gctacccaa-ggttcaactctcaacaaattgtgcaacaaaggtcgcaaaatcataacaaggcactcggtttctaggtcacccgcgaggcgagagcct 40188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 52 - 232
Target Start/End: Original strand, 26031 - 26213
Alignment:
52 cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat 150  Q
    |||||||||||||||  ||||||||| |||||||||||||||| ||||  ||||||  ||||||||||||||||| ||||| || |  | |||||| |||    
26031 cttcaagtaatgcatttaacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacagattataattaacatcctcattaagtctcaat 26130  T
151 tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcg 232  Q
     |||||| | |||||||||||| || |||||||| |||||||||||||||||| |||||| ||||  |||||| |||||||||    
26131 gctaccccaaggttcaactctcaacaaatcgtgcaacaaaggtcgcaaaatcctaacaaggcacttggtttctgggtcactcg 26213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 79 - 246
Target Start/End: Original strand, 8639 - 8806
Alignment:
79 acatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaa 178  Q
    ||||||||||||||| ||||| ||| ||  |||||||||||||| || ||||| ||||  | |||||||||| |||| | | |||||||||||| || |     
8639 acatcataatcaacatcaacacatcctaaacagcttcacagattgtaattaacatcatcattaagtcttaatactactccaaggttcaactctcaacaac 8738  T
179 tcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||||| ||||||||||||||| | |||||| |||||||||||| ||||| |||||||||||||||||    
8739 tcgtgcaacaaaggtcgcaaaacctaacaagacactctgtttctgggtcattcgcgaggcgagagcct 8806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 52 - 246
Target Start/End: Original strand, 13228 - 13423
Alignment:
52 cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat 150  Q
    |||||||||||||| | ||||||||| |||| ||||||||||| ||||| ||||||  ||| ||||||||||||| ||||| || |  | |||||  |||    
13228 cttcaagtaatgcacataacattatatcacaacataatcaacatcaacacatcttaaacagtttcacagattataattaacatcttcattaagtcccaat 13327  T
151 tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
     |||||| |  ||||||||||| || | |||||| ||||||||||||||| | |||||| ||||| |||||| |||||||||||||||||||||||    
13328 actaccccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaacctaacaagacactcagtttctgggtcactcgcgaggcgagagcct 13423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 52 - 246
Target Start/End: Complemental strand, 8518 - 8322
Alignment:
52 cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat 150  Q
    |||||||||||||| | ||||||||| |||| ||||||||||| ||||| ||||||  ||||||||||||||||| ||||| || |  | |||||  |||    
8518 cttcaagtaatgcacataacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcattaagtcccaat 8419  T
151 tctaccca-agggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
     ||||||  |  ||||||||||| || | |||||| || |||||||||||| | |||||| |||||||||||| |||||||||||||||||||||||    
8418 actacccccaacgttcaactctcaacaactcgtgcaacgaaggtcgcaaaacctaacaagacactctgtttctgggtcactcgcgaggcgagagcct 8322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 53 - 246
Target Start/End: Complemental strand, 16584 - 16389
Alignment:
53 ttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaatt 151  Q
    |||||||||||| || ||||||||| ||||||| |||||||| ||||| ||||||  |||||||||||| |||| ||||| ||||  | |||||| |||     
16584 ttcaagtaatgcgtataacattatatcacatcaaaatcaacatcaacacatcttaaacagcttcacagactataattaacatcatcattaagtctcaata 16485  T
152 ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaat-ccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||||| | ||||||||||   || | | |||||||| || ||||||||| |||||||| |||||||||| | |||||||||||||||||||||||    
16484 ctaccccaaggttcaactcctaacaacttgtgcgacacagatcgcaaaatcccaacaaggcactctgtttttgggtcactcgcgaggcgagagcct 16389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 26911 - 27036
Alignment:
2 ataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacata 101  Q
    ||||||||||||| ||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||     
26911 ataattatatcaa-ttcaattcatcaacatctta--tgtatacaaatattcttcaagtaatgcataaacattataatacatcataatcaacacaaacatc 27007  T
102 tcttattcagcttcacagattatagttaac 131  Q
    || ||  ||||||||||||||  |||||||    
27008 tcata-acagcttcacagattgcagttaac 27036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 65; Significance: 1e-28; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 4594 - 4839
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||||| ||| ||| |||||||| | ||  |||||  |||  |||||||||||| || ||||||||| |||||||||||||||| |||||    
4594 cataataatatcaaatgcaagtcaacaacatctcaaat--atacattcataattcaagtaatgcgtataacattatatcacatcataatcaacatcaaca 4691  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||  ||||||||||||||||| ||||| ||||  | |||||| ||| |||||| | |||||||||||  || | | ||||||||  | |||||||    
4692 catcttaaacagcttcacagattataattaacatcatcattaagtctcaatactaccccaaggttcaactcttaacaacttgtgcgacactgatcgcaaa 4791  T
200 atcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||| ||| ||  || |||||||| |||||||||||| ||||||||||    
4792 atcctaactaggtaccctgtttctgggtcactcgcgaagcgagagcct 4839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 12176 - 12421
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||||| ||| ||| |||||||| | ||  |||||  |||  |||||||||||| || ||||||||| |||||||||||||||| |||||    
12176 cataataatatcaaatgcaagtcaacaacatctcaaat--atacattcataattcaagtaatgcgtataacattatatcacatcataatcaacatcaaca 12273  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||  ||||||||||||||||| ||||| ||||  | |||||| ||| |||||| | |||||||||||  || | | ||||||||  | |||||||    
12274 catcttaaacagcttcacagattataattaacatcatcattaagtctcaatactaccccaaggttcaactcttaacaacttgtgcgacactgatcgcaaa 12373  T
200 atcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||| ||| ||  || |||||||| |||||||||||| ||||||||||    
12374 atcctaactaggtaccctgtttctgggtcactcgcgaagcgagagcct 12421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 22128 - 22373
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||||| ||| ||| |||||||| | ||  |||||  |||  |||||||||||| || ||||||||| |||||||||||||||| |||||    
22128 cataataatatcaaatgcaagtcaacaacatctcaaat--atacattcataattcaagtaatgcgtataacattatatcacatcataatcaacatcaaca 22225  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||  ||||||||||||||||| ||||| ||||  | |||||| ||| |||||| | |||||||||||  || | | ||||||||  | |||||||    
22226 catcttaaacagcttcacagattataattaacatcatcattaagtctcaatactaccccaaggttcaactcttaacaacttgtgcgacactgatcgcaaa 22325  T
200 atcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||| ||| ||  || |||||||| |||||||||||| ||||||||||    
22326 atcctaactaggtaccctgtttctgggtcactcgcgaagcgagagcct 22373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 78 - 239
Target Start/End: Original strand, 10326 - 10488
Alignment:
78 cacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacga 177  Q
    |||||||||||||||| ||||| ||||||  ||||||||||||||||  ||||| ||||| | |||||| ||| |||||| | |||||||||||  || |    
10326 cacatcataatcaacatcaacacatcttaaacagcttcacagattattattaacatcattattaagtctcaatactaccccaaggttcaactcttaacaa 10425  T
178 atcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcg 239  Q
     | |||||||| || ||||||||||| |||||| |||| ||||||| ||||||||||||||||    
10426 cttgtgcgacacagatcgcaaaatcctaacaaggcactttgtttctaggtcactcgcgaggcg 10488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 3185 - 2987
Alignment:
1 cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca 99  Q
    |||||| ||||||||| ||| ||| |||||||| | ||  |||||  |||  ||||||||||||||| ||||||||| |||||||||||||||| ||||     
3185 cataataatatcaaatgcaagtcaacaacatctcaaat--atacattcataattcaagtaatgcatataacattatatcacatcataatcaacatcaacg 3088  T
100 tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa 199  Q
     ||||||  ||||||||||| ||||| ||||| ||||  | |||||| ||| |||||| | |||||||||||| || | |||||| ||| ||||||||||    
3087 catcttaaacagcttcacaggttataattaacatcatcattaagtctcaatactaccccaaggttcaactctcaacaactcgtgcaacacaggtcgcaaa 2988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 246
Target Start/End: Complemental strand, 837 - 802
Alignment:
211 cactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||||||||||| |||||||||||||||||||||||    
837 cactctgtttctgggtcactcgcgaggcgagagcct 802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 95 - 233
Target Start/End: Complemental strand, 17928 - 17790
Alignment:
95 caacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtc 194  Q
    ||||| ||||||  ||||||||||||||||| ||||| || |  | |||||||||| |||||||| ||||||| |||| || | |||||| |||||||||    
17928 caacacatcttaaacagcttcacagattataattaacatcctcattaagtcttaatactacccaaaggttcaattctcaacaactcgtgcaacaaaggtc 17829  T
195 gcaaaatccaacaagtcactctgtttctcggtcactcgc 233  Q
    |||||| | ||||||||||||| ||||| ||| ||||||    
17828 gcaaaacctaacaagtcactctatttctgggtgactcgc 17790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 12857 - 12971
Alignment:
14 aattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagct 113  Q
    ||||||||||||||||||||||  |||||||||  | ||||||||||||||||||||||||||| ||||||||||||||  |||||| || |||| ||||    
12857 aattcaattcatcaacatctta--tgtatacaattaatcttcaagtaatgcataaacattataatacatcataatcaactccaacatctcatatt-agct 12953  T
114 tcacagattatagttaac 131  Q
    ||||| |||  |||||||    
12954 tcacaaattgcagttaac 12971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1124 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 1975 - 2089
Alignment:
14 aattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagct 113  Q
    ||||||||||||||||||||||  |||||||||  ||||||||||||||||||||||||||||| ||||||||  ||||   ||||| || || ||||||    
1975 aattcaattcatcaacatctta--tgtatacaattattcttcaagtaatgcataaacattataatacatcatatccaacgcaaacatctcata-tcagct 2071  T
114 tcacagattatagttaac 131  Q
    |||||||||  |||||||    
2072 tcacagattgcagttaac 2089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 21826 - 21712
Alignment:
14 aattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagct 113  Q
    ||||||||||||||||||||||  |||||||||  | ||||||||||||||||||||||||||| ||||| |||||||||  ||||| || ||  |||||    
21826 aattcaattcatcaacatctta--tgtatacaattaatcttcaagtaatgcataaacattataatacatcttaatcaacacaaacatctcata-acagct 21730  T
114 tcacagattatagttaac 131  Q
    |||||||||  |||||||    
21729 tcacagattgcagttaac 21712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 29718 - 29604
Alignment:
14 aattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagct 113  Q
    ||||||||||||||||||||||  |||||||||  | ||||||||||||||||||||||||||| ||||| |||||||||  ||||| || ||  |||||    
29718 aattcaattcatcaacatctta--tgtatacaattaatcttcaagtaatgcataaacattataatacatcttaatcaacacaaacatctcata-acagct 29622  T
114 tcacagattatagttaac 131  Q
    |||||||||  |||||||    
29621 tcacagattgcagttaac 29604  T

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Target: scaffold0395 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 239
Target Start/End: Complemental strand, 947 - 759
Alignment:
53 ttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaatt 151  Q
    ||||||||||||| | ||||||||| |||||| ||||| ||| ||||| ||||||  |||||||||| || |||  || | |||   | |||||| |||     
947 ttcaagtaatgcacataacattatatcacatcgtaatcgacatcaacacatcttaaacagcttcacatatcataaatagcatcaccattaagtctcaata 848  T
152 ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcg 239  Q
    |||||  | |||||||||||| ||   |||||| |||||||||| ||||||| |||||| | |||||||||| |||||||| |||||||    
847 ctacctcaaggttcaactctcaacagctcgtgcaacaaaggtcgaaaaatcctaacaagactctctgtttctaggtcactcacgaggcg 759  T

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Target: scaffold0070 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 246
Target Start/End: Original strand, 4660 - 4855
Alignment:
52 cttcaagtaatgcataa-acattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat 150  Q
    ||||||||||||||||| |||||||| |||||||| ||||||| |||||| | | |  |||| ||||| |||||| ||||| || |    |||||| |||    
4660 cttcaagtaatgcataatacattatatcacatcatgatcaacatcaacatct-taaaacagcctcacaaattataattaacatcttcaataagtctcaat 4758  T
151 tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
     |||||  | |||||||||||  || | |||||| |||||||||||||||||| |||| | || ||||||||| |||  || |||||||||||||||    
4759 actacctcaaggttcaactcttaacaactcgtgcaacaaaggtcgcaaaatcctaacatggcattctgtttctgggtagcttgcgaggcgagagcct 4855  T

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Target: scaffold0627 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 246
Target Start/End: Original strand, 170 - 236
Alignment:
181 gtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||||||| || ||||||||||| |||||| |||||||||||| ||||||||||| |||||||||||    
170 gtgcgacacagatcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgtggcgagagcct 236  T

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Target: scaffold0839 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 1947 - 1866
Alignment:
166 aactctcgacgaatcgtgcgacaaaggtcgcaaaatcc--aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    ||||||| |||| ||||||||||||| |||||||||||  |||||| || |||||  || |||||||||||||||||||||||    
1947 aactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattctgtaactgggtcactcgcgaggcgagagcct 1866  T

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Target: scaffold0120 (Bit Score: 35; Significance: 0.00000000009; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 246
Target Start/End: Original strand, 16333 - 16419
Alignment:
161 ggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||||||||||| || | |||||| ||||||||||||||| || |||||| | |||||||||| ||||||| |||||| ||| ||||    
16333 ggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaacaagactctctgtttctgggtcacttgcgaggtgagggcct 16419  T

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Target: scaffold0120; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 246
Target Start/End: Complemental strand, 32843 - 32748
Alignment:
152 ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||||| | |||||||||||  || | | |||||||| || ||||||||||| |||||| || ||||||| | |||||||||||||||| ||||||    
32843 ctaccccaaggttcaactcttaacaattggtgcgacacagatcgcaaaatcctaacaagacattctgtttatgggtcactcgcgaggcgggagcct 32748  T

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Target: scaffold0120; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 246
Target Start/End: Original strand, 46162 - 46257
Alignment:
152 ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct 246  Q
    |||||| | |||||||||||  || | | |||||||| || ||||||||||| |||||| || ||||||| | |||||||||||||||| ||||||    
46162 ctaccccaaggttcaactcttaacaattggtgcgacacagatcgcaaaatcctaacaagacattctgtttatgggtcactcgcgaggcgggagcct 46257  T

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Target: scaffold0327 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 3514 - 3429
Alignment:
53 ttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatctt-attcagcttcacagattatagttaacctcat 136  Q
    |||||||||||| || ||||||||| |||||||||||||||| ||||| ||||| |  |||||||| |||||||| ||||| ||||    
3514 ttcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaaacagcttcatagattataattaacatcat 3429  T

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Target: scaffold0908 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 3154 - 3103
Alignment:
68 aacattataacacatcataatcaacaacaacatatcttattcagcttcacag 119  Q
    ||||||||| |||||||||||||||| ||||| ||||||  |||||||||||    
3154 aacattatatcacatcataatcaacatcaacacatcttaaacagcttcacag 3103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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