View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0755_low_113 (Length: 273)
Name: NF0755_low_113
Description: NF0755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0755_low_113 |
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Alignment Details
Target: chr4 (Bit Score: 153; Significance: 4e-81; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 56099292 - 56099467
Alignment:
| Q |
1 |
tcatcatcaccatcaatataaatgagtactggacagacatcaccaagacttattattttatgcttaactatgatcgagtagttg------ttttgtttga |
94 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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|
| T |
56099292 |
tcatcatcaccatcaatataaatgagtactggacagacatcaccaagacttattattttatgcttaactatgatcgagtagttgttttgtttttgtttga |
56099391 |
T |
|
| Q |
95 |
tgattcatcatgaacatcaaaggagaagctagttagaatccctatcctaactatgtagtagtactcaaattaataa |
170 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
56099392 |
tgattcatcatgaacatcaaaggagaagctagttagaatccctatcctaactatgtagtagtactcaaattaataa |
56099467 |
T |
|
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