View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0755_low_116 (Length: 271)

Name: NF0755_low_116
Description: NF0755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0755_low_116
NF0755_low_116
[»] scaffold0500 (1 HSPs)
scaffold0500 (1-254)||(7517-7771)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-254)||(166369-166622)
[»] chr4 (40 HSPs)
chr4 (1-254)||(14650670-14650923)
chr4 (58-252)||(40619669-40619862)
chr4 (58-252)||(17048212-17048411)
chr4 (58-252)||(13592004-13592202)
chr4 (62-239)||(10694971-10695154)
chr4 (62-239)||(10908737-10908920)
chr4 (77-254)||(53631353-53631535)
chr4 (58-236)||(15008113-15008297)
chr4 (58-208)||(14746661-14746808)
chr4 (58-252)||(15497113-15497313)
chr4 (58-252)||(15884135-15884335)
chr4 (58-146)||(43256236-43256324)
chr4 (58-144)||(9556391-9556477)
chr4 (58-144)||(14757581-14757667)
chr4 (58-143)||(17810134-17810219)
chr4 (58-230)||(19857395-19857564)
chr4 (86-252)||(26013325-26013498)
chr4 (160-236)||(14184964-14185040)
chr4 (58-146)||(14954326-14954414)
chr4 (77-204)||(15365087-15365214)
chr4 (58-146)||(25689729-25689817)
chr4 (58-141)||(4561493-4561576)
chr4 (58-144)||(5757097-5757183)
chr4 (58-146)||(10712715-10712803)
chr4 (58-146)||(10926485-10926573)
chr4 (77-204)||(19738265-19738391)
chr4 (58-157)||(27533876-27533973)
chr4 (126-204)||(13036569-13036646)
chr4 (58-146)||(12487570-12487658)
chr4 (77-204)||(27995929-27996056)
chr4 (58-144)||(33742241-33742325)
chr4 (160-230)||(40906905-40906975)
chr4 (200-252)||(9923215-9923267)
chr4 (195-247)||(24047394-24047446)
chr4 (195-254)||(26045388-26045447)
chr4 (195-254)||(26050569-26050628)
chr4 (200-237)||(15880661-15880698)
chr4 (166-230)||(15042028-15042092)
chr4 (166-230)||(15112332-15112396)
chr4 (181-209)||(51992684-51992712)
[»] scaffold0073 (1 HSPs)
scaffold0073 (14-245)||(56824-57055)
[»] scaffold0359 (1 HSPs)
scaffold0359 (13-254)||(15422-15670)
[»] chr8 (35 HSPs)
chr8 (13-230)||(19929524-19929739)
chr8 (58-252)||(37515549-37515748)
chr8 (58-252)||(23409639-23409838)
chr8 (58-252)||(23478212-23478412)
chr8 (58-252)||(22238097-22238295)
chr8 (58-254)||(18833404-18833605)
chr8 (58-236)||(26453858-26454042)
chr8 (58-208)||(17461130-17461277)
chr8 (58-247)||(19879965-19880160)
chr8 (77-254)||(5760523-5760705)
chr8 (58-208)||(19808440-19808587)
chr8 (124-245)||(22352887-22353013)
chr8 (58-144)||(21976829-21976915)
chr8 (58-144)||(22111792-22111878)
chr8 (58-144)||(43251674-43251760)
chr8 (132-252)||(44384821-44384946)
chr8 (58-137)||(23659371-23659450)
chr8 (58-144)||(19278442-19278528)
chr8 (58-146)||(18862804-18862892)
chr8 (58-146)||(21410809-21410897)
chr8 (58-146)||(21805301-21805389)
chr8 (58-146)||(21828173-21828261)
chr8 (166-204)||(18302817-18302855)
chr8 (58-111)||(16402080-16402133)
chr8 (185-254)||(22253249-22253318)
chr8 (181-230)||(25849309-25849358)
chr8 (58-109)||(23914029-23914080)
chr8 (172-254)||(5083225-5083307)
chr8 (165-254)||(22381796-22381885)
chr8 (77-204)||(13665223-13665350)
chr8 (77-204)||(13724498-13724625)
chr8 (160-247)||(17438277-17438364)
chr8 (166-252)||(16799455-16799541)
chr8 (166-204)||(23669592-23669630)
chr8 (178-206)||(39695388-39695416)
[»] chr3 (62 HSPs)
chr3 (58-252)||(16796337-16796528)
chr3 (58-252)||(324078-324277)
chr3 (58-247)||(43889704-43889898)
chr3 (58-252)||(12469744-12469943)
chr3 (58-252)||(52989800-52989999)
chr3 (58-252)||(35961608-35961808)
chr3 (58-252)||(11914094-11914293)
chr3 (58-208)||(14966064-14966211)
chr3 (58-208)||(18700385-18700532)
chr3 (58-208)||(54876468-54876615)
chr3 (58-208)||(17691786-17691933)
chr3 (58-208)||(21837320-21837467)
chr3 (58-146)||(12339660-12339748)
chr3 (160-252)||(36527712-36527804)
chr3 (58-143)||(5223261-5223346)
chr3 (58-146)||(4588932-4589020)
chr3 (77-208)||(17046206-17046334)
chr3 (58-144)||(4111408-4111494)
chr3 (58-144)||(7109562-7109648)
chr3 (58-144)||(7113497-7113583)
chr3 (58-144)||(11069932-11070018)
chr3 (58-144)||(11165688-11165774)
chr3 (58-144)||(22321528-22321614)
chr3 (58-144)||(22336583-22336669)
chr3 (58-191)||(22652033-22652162)
chr3 (58-144)||(27409803-27409889)
chr3 (58-144)||(28949588-28949674)
chr3 (58-144)||(55022731-55022817)
chr3 (58-143)||(15617239-15617324)
chr3 (58-143)||(30065811-30065896)
chr3 (77-204)||(6805702-6805829)
chr3 (58-146)||(11300589-11300677)
chr3 (124-230)||(16979089-16979201)
chr3 (58-137)||(16643135-16643214)
chr3 (166-252)||(3265081-3265167)
chr3 (58-144)||(4107556-4107642)
chr3 (58-146)||(37439795-37439883)
chr3 (196-254)||(324022-324080)
chr3 (196-254)||(18700592-18700650)
chr3 (197-254)||(43889902-43889959)
chr3 (196-252)||(10542488-10542544)
chr3 (58-146)||(15964831-15964919)
chr3 (58-146)||(15968755-15968843)
chr3 (58-146)||(15972679-15972767)
chr3 (196-247)||(5841805-5841856)
chr3 (196-254)||(10542542-10542600)
chr3 (185-247)||(10834188-10834250)
chr3 (196-254)||(12469688-12469746)
chr3 (62-144)||(14499189-14499271)
chr3 (62-191)||(14569043-14569168)
chr3 (58-143)||(19775630-19775715)
chr3 (58-146)||(11854595-11854683)
chr3 (159-252)||(24513784-24513885)
chr3 (200-252)||(32403059-32403111)
chr3 (58-109)||(14670914-14670965)
chr3 (58-99)||(15465076-15465117)
chr3 (200-252)||(24178747-24178799)
chr3 (58-109)||(14682413-14682464)
chr3 (192-239)||(15206918-15206965)
chr3 (195-252)||(15245987-15246044)
chr3 (200-252)||(6808086-6808138)
chr3 (181-209)||(14250978-14251006)
[»] chr2 (35 HSPs)
chr2 (13-252)||(39827907-39828145)
chr2 (58-208)||(23069361-23069508)
chr2 (58-252)||(22459640-22459839)
chr2 (58-252)||(27472263-27472462)
chr2 (58-252)||(34874290-34874489)
chr2 (58-239)||(24917967-24918153)
chr2 (58-252)||(23707366-23707565)
chr2 (57-224)||(18358810-18358975)
chr2 (58-208)||(24681312-24681457)
chr2 (58-208)||(21081814-21081961)
chr2 (58-208)||(24670891-24671038)
chr2 (58-239)||(21914767-21914954)
chr2 (58-247)||(34492212-34492407)
chr2 (58-144)||(12901671-12901757)
chr2 (58-144)||(24628638-24628724)
chr2 (58-144)||(27601657-27601743)
chr2 (77-204)||(20915226-20915353)
chr2 (85-204)||(24316190-24316305)
chr2 (58-144)||(24649218-24649304)
chr2 (58-144)||(27379592-27379678)
chr2 (58-144)||(27383638-27383724)
chr2 (160-254)||(34136907-34137001)
chr2 (58-143)||(10101804-10101889)
chr2 (58-146)||(1283248-1283336)
chr2 (196-252)||(13101742-13101798)
chr2 (58-146)||(30345150-30345238)
chr2 (58-142)||(31345075-31345159)
chr2 (58-146)||(41531163-41531251)
chr2 (105-208)||(20320723-20320823)
chr2 (160-247)||(21073552-21073639)
chr2 (77-204)||(24815437-24815562)
chr2 (77-204)||(24834838-24834963)
chr2 (160-247)||(9241901-9241987)
chr2 (58-109)||(9784673-9784724)
chr2 (200-252)||(21081961-21082013)
[»] scaffold0347 (1 HSPs)
scaffold0347 (14-252)||(8859-9095)
[»] chr5 (18 HSPs)
chr5 (62-252)||(22107516-22107711)
chr5 (58-252)||(17010857-17011057)
chr5 (57-239)||(33895722-33895909)
chr5 (58-208)||(6765724-6765871)
chr5 (58-239)||(263003-263189)
chr5 (58-252)||(29447847-29448046)
chr5 (58-144)||(15236994-15237080)
chr5 (58-144)||(19472879-19472965)
chr5 (58-144)||(20295708-20295794)
chr5 (58-143)||(18356154-18356239)
chr5 (58-143)||(20910994-20911079)
chr5 (58-146)||(40723746-40723834)
chr5 (58-146)||(10753223-10753311)
chr5 (160-252)||(23469772-23469864)
chr5 (58-121)||(20910875-20910937)
chr5 (203-252)||(41861565-41861614)
chr5 (200-252)||(24212317-24212369)
chr5 (200-252)||(35852572-35852624)
[»] scaffold0011 (3 HSPs)
scaffold0011 (13-252)||(38065-38303)
scaffold0011 (58-208)||(125851-125998)
scaffold0011 (196-254)||(125733-125791)
[»] scaffold0096 (2 HSPs)
scaffold0096 (58-252)||(21025-21209)
scaffold0096 (196-254)||(20969-21027)
[»] scaffold0001 (2 HSPs)
scaffold0001 (13-252)||(497395-497633)
scaffold0001 (77-204)||(446510-446637)
[»] chr6 (57 HSPs)
chr6 (58-227)||(19773620-19773785)
chr6 (58-208)||(22805828-22805975)
chr6 (58-252)||(17743221-17743420)
chr6 (58-254)||(15705521-15705722)
chr6 (58-252)||(18913788-18913988)
chr6 (58-252)||(18937046-18937246)
chr6 (58-252)||(15174175-15174375)
chr6 (58-239)||(15817599-15817783)
chr6 (58-252)||(28103976-28104176)
chr6 (77-254)||(19656109-19656291)
chr6 (58-208)||(15875279-15875426)
chr6 (58-252)||(17377875-17378074)
chr6 (58-146)||(27416017-27416105)
chr6 (58-146)||(23414839-23414927)
chr6 (58-146)||(27556597-27556685)
chr6 (77-210)||(18259926-18260058)
chr6 (58-146)||(18917425-18917513)
chr6 (58-144)||(8243722-8243808)
chr6 (58-144)||(11566723-11566809)
chr6 (58-144)||(19870451-19870537)
chr6 (58-144)||(23394929-23395015)
chr6 (59-144)||(23989781-23989866)
chr6 (58-136)||(14979465-14979543)
chr6 (58-140)||(22862811-22862893)
chr6 (77-201)||(22376654-22376778)
chr6 (58-146)||(22948967-22949055)
chr6 (58-146)||(31477969-31478057)
chr6 (58-144)||(18955922-18956008)
chr6 (77-230)||(23083039-23083200)
chr6 (58-157)||(14472121-14472218)
chr6 (58-146)||(16760154-16760242)
chr6 (77-204)||(20411538-20411665)
chr6 (58-146)||(22952923-22953011)
chr6 (58-146)||(23871411-23871499)
chr6 (58-146)||(23875367-23875455)
chr6 (196-247)||(28708498-28708549)
chr6 (196-254)||(17743165-17743223)
chr6 (160-254)||(18453149-18453243)
chr6 (58-108)||(18696480-18696530)
chr6 (166-252)||(20078236-20078322)
chr6 (58-146)||(1644567-1644655)
chr6 (200-252)||(22420916-22420968)
chr6 (58-144)||(12619003-12619087)
chr6 (58-105)||(18706301-18706348)
chr6 (171-222)||(20136668-20136719)
chr6 (171-222)||(22196150-22196201)
chr6 (196-239)||(27573089-27573132)
chr6 (196-238)||(27573197-27573239)
chr6 (200-252)||(18927742-18927794)
chr6 (196-252)||(27573143-27573199)
chr6 (200-239)||(2201081-2201120)
chr6 (200-239)||(17105737-17105776)
chr6 (130-186)||(23538745-23538798)
chr6 (200-236)||(20182715-20182751)
chr6 (200-236)||(22153240-22153276)
chr6 (196-232)||(22805732-22805768)
chr6 (195-247)||(23838149-23838200)
[»] scaffold0484 (1 HSPs)
scaffold0484 (58-208)||(748-895)
[»] chr1 (35 HSPs)
chr1 (58-252)||(48520355-48520554)
chr1 (58-252)||(29764358-29764558)
chr1 (58-252)||(50000606-50000805)
chr1 (58-206)||(46198445-46198590)
chr1 (58-208)||(51326688-51326835)
chr1 (58-252)||(12271398-12271597)
chr1 (58-206)||(48603350-48603495)
chr1 (58-204)||(27653300-27653443)
chr1 (58-146)||(33797476-33797564)
chr1 (58-140)||(13881459-13881541)
chr1 (58-208)||(22130984-22131120)
chr1 (58-144)||(1010584-1010670)
chr1 (58-144)||(16375618-16375704)
chr1 (58-144)||(21407216-21407302)
chr1 (190-254)||(23967681-23967745)
chr1 (58-146)||(1925288-1925376)
chr1 (58-146)||(20924302-20924390)
chr1 (172-254)||(14800496-14800578)
chr1 (172-254)||(14809370-14809452)
chr1 (58-144)||(52639402-52639488)
chr1 (58-146)||(20228968-20229056)
chr1 (118-230)||(20316502-20316619)
chr1 (166-254)||(21043347-21043435)
chr1 (195-254)||(20958075-20958134)
chr1 (185-247)||(28312488-28312550)
chr1 (196-254)||(48520299-48520357)
chr1 (196-254)||(20316422-20316480)
chr1 (196-252)||(11809472-11809528)
chr1 (196-252)||(23073006-23073062)
chr1 (200-252)||(25263068-25263120)
chr1 (160-208)||(636042-636090)
chr1 (200-252)||(10492024-10492076)
chr1 (58-109)||(41781666-41781718)
chr1 (195-247)||(47190575-47190627)
chr1 (199-227)||(48603321-48603349)
[»] scaffold0020 (1 HSPs)
scaffold0020 (58-239)||(169827-170013)
[»] chr7 (63 HSPs)
chr7 (58-208)||(14258346-14258493)
chr7 (58-208)||(15719891-15720038)
chr7 (58-208)||(16460843-16460990)
chr7 (58-252)||(32301131-32301330)
chr7 (58-252)||(46580753-46580952)
chr7 (58-208)||(16579654-16579801)
chr7 (58-208)||(16585862-16586009)
chr7 (58-239)||(8940106-8940292)
chr7 (58-208)||(16998488-16998635)
chr7 (58-252)||(15112787-15112986)
chr7 (68-252)||(16323895-16324084)
chr7 (58-252)||(16550724-16550924)
chr7 (58-208)||(8468613-8468760)
chr7 (70-239)||(15116340-15116511)
chr7 (58-208)||(32160922-32161068)
chr7 (58-206)||(17060502-17060646)
chr7 (86-252)||(14981541-14981712)
chr7 (58-146)||(1858909-1858997)
chr7 (58-146)||(13918603-13918691)
chr7 (58-208)||(14273410-14273557)
chr7 (86-208)||(15411017-15411136)
chr7 (58-146)||(2530214-2530301)
chr7 (58-146)||(16614850-16614938)
chr7 (58-146)||(25927326-25927414)
chr7 (58-208)||(17232814-17232961)
chr7 (58-144)||(32968-33054)
chr7 (58-144)||(12704818-12704904)
chr7 (58-144)||(12714725-12714811)
chr7 (58-144)||(12718529-12718615)
chr7 (58-144)||(16114102-16114188)
chr7 (58-144)||(16117255-16117341)
chr7 (58-144)||(16907360-16907446)
chr7 (58-144)||(18283227-18283313)
chr7 (58-144)||(26292256-26292342)
chr7 (77-208)||(1490151-1490279)
chr7 (160-252)||(14157164-14157256)
chr7 (58-144)||(12723440-12723526)
chr7 (58-144)||(18279264-18279350)
chr7 (196-254)||(32301075-32301133)
chr7 (58-143)||(70924-71009)
chr7 (58-143)||(75033-75118)
chr7 (166-254)||(38519339-38519427)
chr7 (160-247)||(42461923-42462010)
chr7 (166-228)||(10501489-10501551)
chr7 (61-146)||(15084055-15084140)
chr7 (58-143)||(45170165-45170250)
chr7 (166-254)||(130883-130971)
chr7 (77-204)||(709296-709423)
chr7 (196-252)||(11392103-11392159)
chr7 (196-252)||(16461050-16461106)
chr7 (77-204)||(16462220-16462347)
chr7 (58-146)||(39722125-39722213)
chr7 (77-204)||(41055659-41055785)
chr7 (166-239)||(9033412-9033485)
chr7 (196-252)||(16614738-16614794)
chr7 (160-247)||(14421924-14422011)
chr7 (196-254)||(16579536-16579594)
chr7 (196-254)||(16586069-16586127)
chr7 (166-204)||(48812022-48812060)
chr7 (200-252)||(11084948-11085000)
chr7 (160-247)||(11661246-11661333)
chr7 (58-109)||(20487533-20487584)
chr7 (185-254)||(16996189-16996258)
[»] scaffold0599 (1 HSPs)
scaffold0599 (58-252)||(1370-1569)
[»] scaffold0434 (1 HSPs)
scaffold0434 (58-252)||(7019-7218)
[»] scaffold0034 (3 HSPs)
scaffold0034 (58-207)||(119905-120051)
scaffold0034 (197-252)||(117200-117255)
scaffold0034 (196-254)||(117144-117202)
[»] scaffold0022 (1 HSPs)
scaffold0022 (58-252)||(53916-54115)
[»] scaffold0462 (1 HSPs)
scaffold0462 (58-252)||(10353-10552)
[»] scaffold0877 (1 HSPs)
scaffold0877 (58-208)||(2791-2938)
[»] scaffold0138 (1 HSPs)
scaffold0138 (58-239)||(33062-33249)
[»] scaffold1283 (1 HSPs)
scaffold1283 (77-254)||(1347-1529)
[»] scaffold0058 (1 HSPs)
scaffold0058 (58-236)||(5606-5790)
[»] scaffold0046 (1 HSPs)
scaffold0046 (58-236)||(22489-22673)
[»] scaffold0017 (2 HSPs)
scaffold0017 (58-245)||(1243-1435)
scaffold0017 (58-245)||(7994-8186)
[»] scaffold0107 (3 HSPs)
scaffold0107 (58-205)||(10162-10306)
scaffold0107 (58-115)||(15492-15549)
scaffold0107 (166-254)||(36147-36235)
[»] scaffold1783 (2 HSPs)
scaffold1783 (58-208)||(313-460)
scaffold1783 (200-245)||(268-313)
[»] scaffold0780 (1 HSPs)
scaffold0780 (58-208)||(3405-3552)
[»] scaffold0125 (1 HSPs)
scaffold0125 (58-208)||(1952-2099)
[»] scaffold0123 (1 HSPs)
scaffold0123 (58-208)||(433-580)
[»] scaffold0009 (1 HSPs)
scaffold0009 (58-208)||(85441-85588)
[»] scaffold0747 (1 HSPs)
scaffold0747 (58-197)||(466-602)
[»] scaffold0515 (1 HSPs)
scaffold0515 (76-252)||(4163-4344)
[»] scaffold0306 (1 HSPs)
scaffold0306 (76-252)||(4163-4344)
[»] scaffold0290 (1 HSPs)
scaffold0290 (58-208)||(49-202)
[»] scaffold0452 (2 HSPs)
scaffold0452 (94-208)||(13490-13601)
scaffold0452 (196-239)||(13661-13704)
[»] scaffold0076 (1 HSPs)
scaffold0076 (58-252)||(24675-24872)
[»] scaffold0057 (1 HSPs)
scaffold0057 (58-208)||(70548-70689)
[»] scaffold0156 (1 HSPs)
scaffold0156 (76-208)||(15637-15766)
[»] scaffold0032 (1 HSPs)
scaffold0032 (58-239)||(67118-67304)
[»] scaffold0278 (2 HSPs)
scaffold0278 (58-230)||(7701-7877)
scaffold0278 (196-254)||(7621-7679)
[»] scaffold0003 (1 HSPs)
scaffold0003 (58-146)||(71256-71344)
[»] scaffold0317 (1 HSPs)
scaffold0317 (58-208)||(6980-7127)
[»] scaffold0741 (1 HSPs)
scaffold0741 (79-208)||(6851-6977)
[»] scaffold0117 (1 HSPs)
scaffold0117 (58-146)||(39207-39295)
[»] scaffold0561 (1 HSPs)
scaffold0561 (166-252)||(10442-10528)
[»] scaffold0016 (1 HSPs)
scaffold0016 (58-158)||(207661-207759)
[»] scaffold0436 (1 HSPs)
scaffold0436 (160-252)||(8000-8092)
[»] scaffold0338 (1 HSPs)
scaffold0338 (77-204)||(11565-11692)
[»] scaffold0293 (1 HSPs)
scaffold0293 (58-146)||(20288-20376)
[»] scaffold0051 (1 HSPs)
scaffold0051 (58-146)||(31078-31166)
[»] scaffold0014 (1 HSPs)
scaffold0014 (177-252)||(126871-126946)
[»] scaffold0372 (1 HSPs)
scaffold0372 (58-144)||(5260-5346)
[»] scaffold0349 (1 HSPs)
scaffold0349 (58-144)||(12283-12369)
[»] scaffold0029 (3 HSPs)
scaffold0029 (58-144)||(61771-61857)
scaffold0029 (58-144)||(65687-65773)
scaffold0029 (58-143)||(80577-80662)
[»] scaffold0028 (1 HSPs)
scaffold0028 (58-144)||(58878-58964)
[»] scaffold0282 (1 HSPs)
scaffold0282 (166-254)||(18233-18321)
[»] scaffold0018 (2 HSPs)
scaffold0018 (129-208)||(20698-20774)
scaffold0018 (77-204)||(7411-7536)
[»] scaffold0061 (1 HSPs)
scaffold0061 (62-144)||(67464-67546)
[»] scaffold0331 (1 HSPs)
scaffold0331 (80-204)||(12878-13002)
[»] scaffold0031 (1 HSPs)
scaffold0031 (58-146)||(36245-36333)
[»] scaffold0026 (1 HSPs)
scaffold0026 (77-204)||(21265-21392)
[»] scaffold0012 (2 HSPs)
scaffold0012 (58-146)||(189536-189624)
scaffold0012 (172-247)||(221278-221353)
[»] scaffold0010 (1 HSPs)
scaffold0010 (160-239)||(629-708)
[»] scaffold0676 (1 HSPs)
scaffold0676 (58-144)||(311-397)
[»] scaffold0108 (1 HSPs)
scaffold0108 (160-246)||(3232-3318)
[»] scaffold0716 (1 HSPs)
scaffold0716 (82-154)||(1114-1187)
[»] scaffold0525 (1 HSPs)
scaffold0525 (58-143)||(4034-4119)
[»] scaffold0200 (1 HSPs)
scaffold0200 (58-115)||(17559-17616)
[»] scaffold0025 (1 HSPs)
scaffold0025 (124-208)||(78299-78380)
[»] scaffold0415 (1 HSPs)
scaffold0415 (58-146)||(254-342)
[»] scaffold0229 (1 HSPs)
scaffold0229 (58-146)||(11660-11748)
[»] scaffold0141 (1 HSPs)
scaffold0141 (58-146)||(14246-14334)
[»] scaffold0109 (1 HSPs)
scaffold0109 (58-157)||(36101-36198)
[»] scaffold0074 (1 HSPs)
scaffold0074 (166-254)||(8128-8216)
[»] scaffold0679 (1 HSPs)
scaffold0679 (196-247)||(2654-2705)
[»] scaffold0037 (1 HSPs)
scaffold0037 (60-115)||(80496-80551)
[»] scaffold0396 (1 HSPs)
scaffold0396 (160-254)||(1861-1955)
[»] scaffold0157 (1 HSPs)
scaffold0157 (58-146)||(32819-32907)
[»] scaffold0299 (1 HSPs)
scaffold0299 (92-146)||(6874-6928)
[»] scaffold0098 (1 HSPs)
scaffold0098 (126-204)||(39283-39360)
[»] scaffold0065 (1 HSPs)
scaffold0065 (166-204)||(55038-55076)
[»] scaffold0802 (1 HSPs)
scaffold0802 (200-252)||(5638-5690)
[»] scaffold0335 (1 HSPs)
scaffold0335 (200-252)||(723-775)
[»] scaffold0170 (1 HSPs)
scaffold0170 (166-254)||(2923-3011)
[»] scaffold0019 (2 HSPs)
scaffold0019 (166-239)||(21808-21889)
scaffold0019 (195-247)||(132891-132942)
[»] scaffold0004 (2 HSPs)
scaffold0004 (200-252)||(362741-362793)
scaffold0004 (181-230)||(109307-109356)
[»] scaffold0162 (1 HSPs)
scaffold0162 (77-203)||(24873-24998)
[»] scaffold0054 (1 HSPs)
scaffold0054 (171-222)||(75900-75951)
[»] scaffold1539 (1 HSPs)
scaffold1539 (160-254)||(905-999)
[»] scaffold0575 (1 HSPs)
scaffold0575 (58-112)||(6237-6291)
[»] scaffold0047 (1 HSPs)
scaffold0047 (126-204)||(78206-78283)
[»] scaffold0577 (1 HSPs)
scaffold0577 (200-252)||(7776-7828)
[»] scaffold0337 (1 HSPs)
scaffold0337 (195-247)||(9815-9866)


Alignment Details
Target: scaffold0500 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 7771 - 7517
Alignment:
Q  1 cataatgttata-ctgttctgagagtctgaattgaggtgattaaatgttgatcattattgtgaaatatttatattccttatgtggaaaatgaatgatgtt 99  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||    
T  7771 cataatgttattgctgttctgagagtctgaattgaggtgattaaatgttgatgattattatgaaatatttatatgccttatgtggaaaatgaatgatgtt 7672  T
Q  100 gaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatattaatcaagttgcaagtgttggtct 199  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||| || || |||||||||||||||||||||||||||||||||||    
T  7671 gaagttgttgatgcttatcattgatattgttatgctgtgaattgcttatgtgttgtttcctattgctgttgaatattaatcaagttgcaagtgttggtct 7572  T
Q  200 aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
     ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  7571 gagttgtaagttgtcgttccaaagtattggattcttaagttgttgatgttgtcca 7517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 166369 - 166622
Alignment:
Q  1 cataatgttatactgttctgagagtctgaattgaggtgattaaatgttgatcattattgtgaaatatttatattccttatgtggaaaatgaatgatgttg 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||    
T  166369 cataatgttatgctgttctgagagtctgaattgaggtgattaaatgttgataattattgtgaaatatttatatgccttatgtggaatatgaatgatgttg 166468  T
Q  101 aagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatattaatcaagttgcaagtgttggtcta 200  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||| |||||  |||||||||||| ||||| ||||||||||||||||    
T  166469 aagttgttgatgcttatcattgatattgttatgctgtgaattgcttatgtgctatttcctgttgttgttgaatattagtcaagctgcaagtgttggtcta 166568  T
Q  201 agttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
    |||||||| ||||||||||||||||||||||| |||| | ||||||| ||||||    
T  166569 agttgtaacttgtcgttccaaagtattggattattaaattgttgatgttgtcca 166622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 186; Significance: 1e-101; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 14650923 - 14650670
Alignment:
Q  1 cataatgttatactgttctgagagtctgaattgaggtgattaaatgttgatcattattgtgaaatatttatattccttatgtggaaaatgaatgatgttg 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||    
T  14650923 cataatgttatgctgttctgagagtctgaattgaggtgattaaatgttgataattattgtgaaatatttatatgccttatgtggaatatgaatgatgttg 14650824  T
Q  101 aagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatattaatcaagttgcaagtgttggtcta 200  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||| |||||  |||||||||||| ||||| ||||||||||||||||    
T  14650823 aagttgttgatgcttatcattgatattgttatgctgtgaattgcttatgtgctatttcctgttgttgttgaatattagtcaagctgcaagtgttggtcta 14650724  T
Q  201 agttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
    |||||||| ||||||||||||||||||||||| |||| | ||||||| ||||||    
T  14650723 agttgtaacttgtcgttccaaagtattggattattaaattgttgatgttgtcca 14650670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 58 - 252
Target Start/End: Complemental strand, 40619862 - 40619669
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    ||||||||| |||||| |||||||||||||||| | |||||| | ||||||||||||| |||||  |||| |||||||||||||||||  ||||||| ||    
T  40619862 tgtgaaataattatatgccttatgtggaaaatgtaagatgtttaggttgttgatgcttttcattaatatttttatgttgtgaattgct--tgtgctg-tt 40619766  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttg--taagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    ||||||||||||||||||| |||||||||||  ||||||| |||||||  ||||||||||||||||||||||||| |||||||| ||||||| ||||    
T  40619765 tctgttactgttgaatattgatcaagttgcagatgttggtttaagttgtctaagttgtcgttccaaagtattggagtcttaagttgttgatgttgtc 40619669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 58 - 252
Target Start/End: Original strand, 17048212 - 17048411
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| |||||||||||| ||| |||||||| |||||||||||||||  ||||  ||||||||||||||||||||||  ||||||| ||    
T  17048212 tgtgaaatatttatatgccttatgtggaagatgtatgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgct--tgtgctg-tt 17048308  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtct--------aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgat 249  Q
    ||||||  ||||||||||| ||||||||||| ||||||||||        ||||||||||||||||||||||||||||||| |||||||| ||||||| |    
T  17048309 tctgttgttgttgaatattgatcaagttgcaggtgttggtctaagttgtaaagttgtaagttgtcgttccaaagtattggagtcttaagttgttgatgtt 17048408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 58 - 252
Target Start/End: Original strand, 13592004 - 13592202
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| ||||||||||||| || |||||||| |||||| |||||||| |||||  ||||| |||||||||||||||||  |||||||||    
T  13592004 tgtgaaatatttatatgccttatgtggaaa-tgtatgatgtttaagttgatgatgcttttcattaatattgatatgttgtgaattgctt--gtgctgttt 13592100  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtcta--------agttgtaagttgtcgttccaaagtattggattcttaagtggttgatgat 249  Q
     ||||| |||||||||||| ||||||||| | |||||||||||        |||||||||||||||||||||||||||||| |||||||| ||||||| |    
T  13592101 -ctgttgctgttgaatattgatcaagttgaaggtgttggtctaagttgtagagttgtaagttgtcgttccaaagtattggagtcttaagttgttgatgtt 13592199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 62 - 239
Target Start/End: Original strand, 10694971 - 10695154
Alignment:
Q  62 aaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttttctg 161  Q
    ||||| ||||||||||||||||||||||| |||||||| |||||||||||  || |||||  ||||||||||||||||||||||  ||||||| ||||||    
T  10694971 aaataattatattccttatgtggaaaatgtatgatgtttaagttgttgatatttttcattaatattgttatgttgtgaattgct--tgtgctg-tttctg 10695067  T
Q  162 ttactgttgaatattaatcaagttgcaagtgttg---------gtctaagttgtaagttgtcgttccaaagtattggattcttaagt 239  Q
    || |||||||||||| |||||||||||  |||||         ||| ||||||||||||||||||||||||||||||| ||||||||    
T  10695068 ttgctgttgaatattgatcaagttgcagatgttggtttaagttgtccaagttgtaagttgtcgttccaaagtattggagtcttaagt 10695154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 62 - 239
Target Start/End: Original strand, 10908737 - 10908920
Alignment:
Q  62 aaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttttctg 161  Q
    ||||| ||||||||||||||||||||||| |||||||| |||||||||||  || |||||  ||||||||||||||||||||||  ||||||| ||||||    
T  10908737 aaataattatattccttatgtggaaaatgtatgatgtttaagttgttgatatttttcattaatattgttatgttgtgaattgct--tgtgctg-tttctg 10908833  T
Q  162 ttactgttgaatattaatcaagttgcaagtgttg---------gtctaagttgtaagttgtcgttccaaagtattggattcttaagt 239  Q
    || |||||||||||| |||||||||||  |||||         ||| ||||||||||||||||||||||||||||||| ||||||||    
T  10908834 ttgctgttgaatattgatcaagttgcagatgttggtttaagttgtccaagttgtaagttgtcgttccaaagtattggagtcttaagt 10908920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 77 - 254
Target Start/End: Original strand, 53631353 - 53631535
Alignment:
Q  77 ttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatatt 176  Q
    |||||||||| ||| |||||||||||||||| | || ||||| ||  |||||||||| ||||||||||||  ||||||||| ||||| ||||||||||||    
T  53631353 ttatgtggaatatgtatgatgttgaagttgtggttgtttatcgttaatattgttatgatgtgaattgctt--gtgctgttt-ctgttgctgttgaatatt 53631449  T
Q  177 aatcaagttgcaagtgttggtct--------aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
     ||||||||||||||||||||||        ||||||||||||||| ||||||||||||||| |||||||| ||||||| ||||||    
T  53631450 gatcaagttgcaagtgttggtctaagttgtaaagttgtaagttgtcattccaaagtattggagtcttaagttgttgatgttgtcca 53631535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 58 - 236
Target Start/End: Complemental strand, 15008297 - 15008113
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    ||||||||| ||||||  ||||||||||||||| |||||||| ||||||||||||||| |||||  ||||| ||||||||||||||||  ||||||| ||    
T  15008297 tgtgaaataattatatatcttatgtggaaaatgtatgatgtttaagttgttgatgcttttcattaatattgatatgttgtgaattgct--tgtgctg-tt 15008201  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttg---------gtctaagttgtaagttgtcgttccaaagtattggattctta 236  Q
    |||||| |||||||||||| |||||||||||  |||||         |||||||||||||||||||||| |||||||||||| |||||    
T  15008200 tctgttgctgttgaatattgatcaagttgcagatgttggtttaagttgtctaagttgtaagttgtcgtttcaaagtattggagtctta 15008113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 58 - 208
Target Start/End: Original strand, 14746661 - 14746808
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| | |||||||||||||| |||||||| ||||||||||||||  |||||  ||||||||||||||||||||||  ||| ||| ||    
T  14746661 tgtgaaatatttatatgcgttatgtggaaaatgtatgatgtttaagttgttgatgctcttcattaatattgttatgttgtgaattgct--tgtactg-tt 14746757  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaa 208  Q
    ||||||  ||||| ||||| ||||||||||| |||||||||||||||||||    
T  14746758 tctgttgttgttgcatattgatcaagttgcaggtgttggtctaagttgtaa 14746808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 58 - 252
Target Start/End: Original strand, 15497113 - 15497313
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    ||||||||| ||||||  ||||||||||||||| |||||||| ||||||||||||||| |||||  ||||||||||||| |||||| |  |||| || ||    
T  15497113 tgtgaaataattatatgtcttatgtggaaaatgtatgatgtttaagttgttgatgcttttcattaatattgttatgttgagaattgat--tgtgatg-tt 15497209  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttg---------gtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatga 248  Q
    |||||| |||||||||||| || ||||||||  |||||         |||||||||||||||| || ||||||||||||||| |||||||| |||||||     
T  15497210 tctgttgctgttgaatattgattaagttgcagatgttggtttaagttgtctaagttgtaagttttccttccaaagtattggagtcttaagttgttgatgt 15497309  T
Q  249 tgtc 252  Q
    ||||    
T  15497310 tgtc 15497313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 58 - 252
Target Start/End: Original strand, 15884135 - 15884335
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    ||||||||| |||||| ||||||||| |||||| |||||||| |||||||||||| || |||||  ||||||||||||| ||||||||  |||| || ||    
T  15884135 tgtgaaataattatatgccttatgtgaaaaatgtatgatgtttaagttgttgatgattttcattaatattgttatgttgagaattgct--tgtgttg-tt 15884231  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttg---------gtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatga 248  Q
    ||||||  ||||||||||| |||||||||||  |||||         |||||||| |||||||||||||||||| ||||||| |||||||| |||||||     
T  15884232 tctgttgatgttgaatattgatcaagttgcagatgttggtttaagatgtctaagtcgtaagttgtcgttccaaattattggaatcttaagttgttgatgt 15884331  T
Q  249 tgtc 252  Q
    ||||    
T  15884332 tgtc 15884335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 43256236 - 43256324
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    |||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||  ||||  ||||| |||||||||||||||||    
T  43256236 tgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttgatgcttcacattaatattgatatgttgtgaattgctt 43256324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Complemental strand, 9556477 - 9556391
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  9556477 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 9556391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 14757581 - 14757667
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  14757581 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 14757667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 58 - 143
Target Start/End: Complemental strand, 17810219 - 17810134
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattg 143  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  ||||||||||||||||||||    
T  17810219 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattg 17810134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 58 - 230
Target Start/End: Complemental strand, 19857564 - 19857395
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||| || |||  ||||||||||| |||  ||||| || |||||||||||| || |||||  |||||| |||||||||||| |||  || ||||||    
T  19857564 tgtgaaatgttcataagccttatgtggagaatatatgatatttaagttgttgatgtttttcattaatattgtcatgttgtgaattactt--gtactgttt 19857467  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattgga 230  Q
     ||||| |||||| ||||| |||| | |||| |||||||| ||||||||||| ||| | |||||| |||||||    
T  19857466 -ctgttgctgttgcatattgatcaggatgcaggtgttggtttaagttgtaagatgttgatccaaattattgga 19857395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 252
Target Start/End: Complemental strand, 26013498 - 26013325
Alignment:
Q  86 aaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttttctgttact--gttgaatattaatcaag 183  Q
    ||||| |||||| | ||||||||||||||  |||||  ||||||||||||||||||||||  ||| ||| |||||||| ||  |||| ||||| ||||||    
T  26013498 aaatgtatgatgcttaagttgttgatgctcttcattaatattgttatgttgtgaattgct--tgtactg-tttctgttgctgggttgcatattgatcaag 26013402  T
Q  184 ttgcaagtgttggtct--------aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    |||||  ||||||| |        ||||||||||||||| |||||||||||||||||||||||| ||| ||| ||||    
T  26013401 ttgcagatgttggtttaagttgtaaagttgtaagttgtctttccaaagtattggattcttaagttgttaatgttgtc 26013325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 236
Target Start/End: Complemental strand, 14185040 - 14184964
Alignment:
Q  160 tgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattggattctta 236  Q
    |||| |||||| ||||| ||||| ||||| |||||||||||||||||||||| || ||||||||||||||| |||||    
T  14185040 tgttgctgttgtatattgatcaaattgcaggtgttggtctaagttgtaagttatctttccaaagtattggaatctta 14184964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 14954326 - 14954414
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    ||||||||||||||||  ||||||||||| ||| |||||||| ||||||||||| |||   |||  |||||||||||||||||||||||    
T  14954326 tgtgaaatatttatatgacttatgtggaagatgtatgatgtttaagttgttgatactttatattaatattgttatgttgtgaattgctt 14954414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 15365214 - 15365087
Alignment:
Q  77 ttatgtggaaaatgaatgatgttgaagttgttgatgcttat-cattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatat 175  Q
    |||||||||| ||| ||||||||||||||||| |||  ||| | |||   |||||||||||||| ||| ||||||| ||  | |||||  ||||||||||    
T  15365214 ttatgtggaatatgtatgatgttgaagttgttaatgtatattcgttgacgttgttatgttgtgagttgtttatgtgttgcct-ctgttgttgttgaatat 15365116  T
Q  176 taatcaagttgcaagtgttggtctaagtt 204  Q
    |||| ||||||||||||||||||||||||    
T  15365115 taattaagttgcaagtgttggtctaagtt 15365087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 25689817 - 25689729
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    ||||||||||||||||  ||||||||||| ||| |||||||| ||||||||||| |||   |||  |||||||||||||||||||||||    
T  25689817 tgtgaaatatttatataacttatgtggaagatgtatgatgtttaagttgttgatactttatattaatattgttatgttgtgaattgctt 25689729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 141
Target Start/End: Original strand, 4561493 - 4561576
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaat 141  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  || |||||||||||||||    
T  4561493 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaataatgttatgttgtgaat 4561576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 5757097 - 5757183
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| ||||||||| |||||  ||||  ||||||||||||||| |||||    
T  5757097 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttggtgcttcacattaatattgttatgttgtggattgc 5757183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 10712803 - 10712715
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    ||||||||||||||||  ||||||||||| ||| |||||||| ||||||||||| |||   |||  ||||||| |||||||||||||||    
T  10712803 tgtgaaatatttatatgacttatgtggaagatgtatgatgtttaagttgttgatacttcatattaatattgttgtgttgtgaattgctt 10712715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 10926573 - 10926485
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    ||||||||||||||||  ||||||||||| ||| |||||||| ||||||||||| |||   |||  ||||||| |||||||||||||||    
T  10926573 tgtgaaatatttatatgacttatgtggaagatgtatgatgtttaagttgttgatacttcatattaatattgttgtgttgtgaattgctt 10926485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 19738391 - 19738265
Alignment:
Q  77 ttatgtggaaaatgaatgatgttgaagttgttgatgcttat-cattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatat 175  Q
    |||||||||| ||| |||||||||||||||||  || |||| ||||    ||||||||||||||  || ||||||||||  | |||||  | ||||||||    
T  19738391 ttatgtggaatatgtatgatgttgaagttgttattgtttattcattaacgttgttatgttgtgagatgtttatgtgctgcct-ctgttgtt-ttgaatat 19738294  T
Q  176 taatcaagttgcaagtgttggtctaagtt 204  Q
    |||||||||||||||||||||||||||||    
T  19738293 taatcaagttgcaagtgttggtctaagtt 19738265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 157
Target Start/End: Complemental strand, 27533973 - 27533876
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    ||||||||| |||||| |||||||||||| ||| |||||||| ||||||||||| |||   | |  |||||||||||||||||||||  |||||||||||    
T  27533973 tgtgaaatacttatatgccttatgtggaagatgtatgatgtttaagttgttgatacttcataataatattgttatgttgtgaattgc--atgtgctgttt 27533876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 204
Target Start/End: Original strand, 13036569 - 13036646
Alignment:
Q  126 ttgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatattaatcaagttgcaagtgttggtctaagtt 204  Q
    ||||||||||||||  || ||||||||||  | |||||  |||||||||||||| ||||||||||||||||||||||||    
T  13036569 ttgttatgttgtgagctgtttatgtgctgcct-ctgttgttgttgaatattaattaagttgcaagtgttggtctaagtt 13036646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 12487658 - 12487570
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    ||||||||||||||||  |||||||| || ||| |||||||| || |||||||| |||   |||  |||||||||||||||||||||||    
T  12487658 tgtgaaatatttatatgacttatgtgaaagatgtatgatgtttaaattgttgatacttcatattaatattgttatgttgtgaattgctt 12487570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 27996056 - 27995929
Alignment:
Q  77 ttatgtggaaaatgaatgatgttgaagttgttgatgcttatc-attggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatat 175  Q
    |||||||||| ||| |||||||||||||||||  || ||||  ||||   |||||||| |||||  || ||||||| ||  | |||||  ||||||||||    
T  27996056 ttatgtggaatatgtatgatgttgaagttgttattgtttatttattgacgttgttatgctgtgagctgtttatgtgatgcct-ctgttgttgttgaatat 27995958  T
Q  176 taatcaagttgcaagtgttggtctaagtt 204  Q
    |||| ||||||||||||||||||||||||    
T  27995957 taattaagttgcaagtgttggtctaagtt 27995929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 144
Target Start/End: Complemental strand, 33742325 - 33742241
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||| |  ||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||| ||||||||||    
T  33742325 tgtgaaatatttatgt--cttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgctgtgaattgc 33742241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 230
Target Start/End: Complemental strand, 40906975 - 40906905
Alignment:
Q  160 tgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattgga 230  Q
    |||| ||||||||| ||||| ||| || || ||||||| |||||||||||| || ||||||||||||||||    
T  40906975 tgttgctgttgaatcttaattaagatgtaaatgttggtataagttgtaagtcgttgttccaaagtattgga 40906905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 252
Target Start/End: Complemental strand, 9923267 - 9923215
Alignment:
Q  200 aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    ||||||||||||||| ||||||||||||||| |||||||| ||| ||| ||||    
T  9923267 aagttgtaagttgtctttccaaagtattggagtcttaagttgttaatgttgtc 9923215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 24047394 - 24047446
Alignment:
Q  195 ggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatg 247  Q
    |||||||| |||||| | |||||||||||||||||| |||||||| |||||||    
T  24047394 ggtctaagatgtaagatttcgttccaaagtattggagtcttaagttgttgatg 24047446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 26045388 - 26045447
Alignment:
Q  195 ggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
    |||||||| |||||| |||||||||||||| ||||| || ||||| ||||||| ||||||    
T  26045388 ggtctaagatgtaagatgtcgttccaaagtgttggagtcctaagttgttgatgttgtcca 26045447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 26050569 - 26050628
Alignment:
Q  195 ggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
    |||||||| |||||| |||||||||||||| ||||| || ||||| ||||||| ||||||    
T  26050569 ggtctaagatgtaagatgtcgttccaaagtgttggagtcctaagttgttgatgttgtcca 26050628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 237
Target Start/End: Complemental strand, 15880698 - 15880661
Alignment:
Q  200 aagttgtaagttgtcgttccaaagtattggattcttaa 237  Q
    ||||||||||||||| ||||||||||||||| ||||||    
T  15880698 aagttgtaagttgtctttccaaagtattggagtcttaa 15880661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 15042028 - 15042092
Alignment:
Q  166 tgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattgga 230  Q
    ||||| |||||||| |||||||| |||| ||| ||||||||||| ||| | |||||| |||||||    
T  15042028 tgttgtatattaattaagttgcatgtgtcggtttaagttgtaagatgttgatccaaattattgga 15042092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 15112396 - 15112332
Alignment:
Q  166 tgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattgga 230  Q
    ||||| |||||||| |||||||| |||| ||| ||||||||||| ||| | |||||| |||||||    
T  15112396 tgttgtatattaattaagttgcatgtgtcggtttaagttgtaagatgttgatccaaattattgga 15112332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 209
Target Start/End: Complemental strand, 51992712 - 51992684
Alignment:
Q  181 aagttgcaagtgttggtctaagttgtaag 209  Q
    |||||||||||||||||||||||||||||    
T  51992712 aagttgcaagtgttggtctaagttgtaag 51992684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 14 - 245
Target Start/End: Complemental strand, 57055 - 56824
Alignment:
Q  14 tgttctgagagtctgaattgaggtgattaaatgttgatcattattgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgc 113  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  57055 tgttctgagagtcttaattgaggtgattaaatgttgatgattattgtgaaatatttatatgccttatgtggaaaatgaatgatgttgaagttgtcgatgc 56956  T
Q  114 ttatcattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttgt 213  Q
    ||||||||| |||||||||| ||||||||| ||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  56955 ttatcattgatattgttatgctgtgaattgtttatgtgttgtttcctgttgctgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttgt 56856  T
Q  214 cgttccaaagtattggattcttaagtggttga 245  Q
    |||||||||||||||||||| ||||| |||||    
T  56855 cgttccaaagtattggattcgtaagttgttga 56824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 175; Significance: 3e-94; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 13 - 254
Target Start/End: Complemental strand, 15670 - 15422
Alignment:
Q  13 ctgttctgagagtctgaattgaggtgattaaatgttgatcattattgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatg 112  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  15670 ctgttctgagagtctgaattgaggtgattaaatgttgatgattattgtgaaatatttatatgccttatgtggaaaatgaatgatgttgaagttgttgatg 15571  T
Q  113 cttatcattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatattaatcaagttgcaagtgttggtc-------taagttg 205  Q
    |||||||||| |||||||||| ||||||||||||||||||||||| ||  |  ||||||||||||||||||||||| |||||||||       |||||||    
T  15570 cttatcattgatattgttatgatgtgaattgcttatgtgctgtttcctaatgttgttgaatattaatcaagttgcaggtgttggtctaagttgtaagttg 15471  T
Q  206 taagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  15470 taagttgtcgttccaaagtattggattcttaagttgttgatgttgtcca 15422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 151; Significance: 6e-80; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 13 - 230
Target Start/End: Original strand, 19929524 - 19929739
Alignment:
Q  13 ctgttctgagagtctgaattgaggtgattaaatgttgatcattattgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatg 112  Q
    ||||||||||||||||||||| | ||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19929524 ctgttctgagagtctgaattgtgatgattaaatgttgttgattattgtgaaatatttatatgccttatgtggaaaatgaatgatgttgaagttgttgatg 19929623  T
Q  113 cttatcattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttg 212  Q
    |||||||||  |||||||||| |||||||||||  ||||||||||| |||| ||||||||||||||| |||||||||||||||||| |||||||||||||    
T  19929624 cttatcattaatattgttatgctgtgaattgct--tgtgctgttttatgttgctgttgaatattaattaagttgcaagtgttggtccaagttgtaagttg 19929721  T
Q  213 tcgttccaaagtattgga 230  Q
    | |||||||| |||||||    
T  19929722 ttgttccaaaatattgga 19929739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 58 - 252
Target Start/End: Complemental strand, 37515748 - 37515549
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||| | |||||||||||||| | | |||||| ||||||||||||||| |||||  ||||| ||||||||||||||||  |||| || ||    
T  37515748 tgtgaaatatttatgtgccttatgtggaaaaagtacgatgtttaagttgttgatgcttttcattaatattgatatgttgtgaattgct--tgtgatg-tt 37515652  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgt--------aagttgtcgttccaaagtattggattcttaagtggttgatgat 249  Q
    |||||| |||||||||||| ||||||||||| |||||||||||||||||        |||||||||||||||||||||||| |||||||| || |||| |    
T  37515651 tctgttgctgttgaatattgatcaagttgcaggtgttggtctaagttgtagagttgcaagttgtcgttccaaagtattggagtcttaagttgtcgatgtt 37515552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 58 - 252
Target Start/End: Complemental strand, 23409838 - 23409639
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| |||||||||||||||||||||| || |||||||||||| |  |||||  ||||||||||||||||||||||  |||| || ||    
T  23409838 tgtgaaatatttatataccttatgtggaaaatgaatgatatttaagttgttgatgttcttcattaatattgttatgttgtgaattgct--tgtgttg-tt 23409742  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtct--------aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgat 249  Q
    |||||| |||||| ||||| ||||| ||||| ||||||||||        ||||||||||||||| ||||||||||||||| |||||||| ||| ||| |    
T  23409741 tctgttgctgttgcatattgatcaaattgcaggtgttggtctaagttgtaaagttgtaagttgtctttccaaagtattggagtcttaagttgttaatgtt 23409642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 58 - 252
Target Start/End: Complemental strand, 23478412 - 23478212
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    ||||||||| |||||| |||||||||||||||| |||||||| |||||||| |||||| |||||  ||||||||||||||||||||||  ||||||| ||    
T  23478412 tgtgaaataattatatgccttatgtggaaaatgtatgatgtttaagttgtttatgcttttcattaatattgttatgttgtgaattgct--tgtgctg-tt 23478316  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttg---------gtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatga 248  Q
    ||| ||  ||||||||||| ||||||||| |  |||||         ||||||||| ||||||||||||||||||||||||| |||||||| |||||||     
T  23478315 tcttttgatgttgaatattgatcaagttggagatgttggtttaagttgtctaagttataagttgtcgttccaaagtattggagtcttaagttgttgatgt 23478216  T
Q  249 tgtc 252  Q
    ||||    
T  23478215 tgtc 23478212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 58 - 252
Target Start/End: Original strand, 22238097 - 22238295
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| ||||||||||||| || |||||||| ||||||||||| ||  |||||  |||||||||||||||||||||||  || ||||||    
T  22238097 tgtgaaatatttatatgccttatgtggaaa-tgtatgatgtttaagttgttgatcctcttcattaatattgttatgttgtgaattgctt--gtactgttt 22238193  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtct--------aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgat 249  Q
     ||||| |||||| ||||| ||||||||||| ||||||||||        ||||||||||||||| ||||||||||||||| |||||||| ||| ||| |    
T  22238194 -ctgttgctgttgcatattgatcaagttgcaggtgttggtctaagttgtaaagttgtaagttgtctttccaaagtattggagtcttaagttgttaatgtt 22238292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 58 - 254
Target Start/End: Complemental strand, 18833605 - 18833404
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| |||||||||||||||| |||||||| ||||| || |||||| |||||  ||||| ||||||||||||||||  ||||||| ||    
T  18833605 tgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttttttatgcttctcattaatattgatatgttgtgaattgct--tgtgctg-tt 18833509  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtct--------aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgat 249  Q
    | ||||  ||||||||||| ||||||||| | | ||||||||        |||||||||||||||||||| |||||||||| |||||||| || |||| |    
T  18833508 tatgttgttgttgaatattgatcaagttgtaggagttggtctaagttgtaaagttgtaagttgtcgttccgaagtattggagtcttaagttgtcgatgtt 18833409  T
Q  250 gtcca 254  Q
    |||||    
T  18833408 gtcca 18833404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 58 - 236
Target Start/End: Complemental strand, 26454042 - 26453858
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    ||||||||| ||||||  |||||||| |||||| |||||||| ||||||||||||||| |||||  ||||||||||||||||||||||  |||| || ||    
T  26454042 tgtgaaataattatatgtcttatgtgaaaaatgtatgatgtttaagttgttgatgcttttcattaatattgttatgttgtgaattgct--tgtgttg-tt 26453946  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggt---------ctaagttgtaagttgtcgttccaaagtattggattctta 236  Q
    |||||| | |||||||||| |||||||||||  |||||||         ||||||||||||||||||||||||||||||||| |||||    
T  26453945 tctgttgcagttgaatattgatcaagttgcagatgttggtttaagttggctaagttgtaagttgtcgttccaaagtattggagtctta 26453858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 58 - 208
Target Start/End: Original strand, 17461130 - 17461277
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| |||||||||||||||| | |||||| ||||||||| ||||| |||||  ||||||||||||||||||||||  ||| ||| ||    
T  17461130 tgtgaaatatttatatgccttatgtggaaaatgtaagatgtttaagttgttggtgcttttcattaatattgttatgttgtgaattgct--tgtactg-tt 17461226  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaa 208  Q
    ||||||  ||||| ||||| ||||||||||| ||||| |||||||||||||    
T  17461227 tctgttgttgttgcatattgatcaagttgcaggtgtttgtctaagttgtaa 17461277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 58 - 247
Target Start/End: Complemental strand, 19880160 - 19879965
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    ||||||||| |||||| |||||||||||||||| |||||||| ||||||||||||||| |||||  |||| |||||||| ||||||||  |||| || ||    
T  19880160 tgtgaaataattatatgccttatgtggaaaatgtatgatgtttaagttgttgatgcttttcattaatatttttatgttgagaattgct--tgtgttg-tt 19880064  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgt---------tggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatg 247  Q
    ||||||  ||||||||||| | |||||||||  |||         |||||| |||||||||||||||||||||||||||||| |||||||| |||||||    
T  19880063 tctgttgatgttgaatattgaccaagttgcagatgttggtttaagtggtctgagttgtaagttgtcgttccaaagtattggagtcttaagttgttgatg 19879965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 77 - 254
Target Start/End: Complemental strand, 5760705 - 5760523
Alignment:
Q  77 ttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatatt 176  Q
    |||||||||| ||| |||||||||||||||| | || ||||| ||  |||||||||| |||||||||||| |||  ||||| |||||  |||||||||||    
T  5760705 ttatgtggaatatgtatgatgttgaagttgtagttgtttatcgttaatattgttatgatgtgaattgcttgtgt--tgttt-ctgttgttgttgaatatt 5760609  T
Q  177 aatcaagttgcaagtgttggtctaagtt--------gtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
     |||||||||||||||||||||||||||        |||||||||| ||||||||||||||| |||||||| ||||||| ||||||    
T  5760608 gatcaagttgcaagtgttggtctaagttgtaaagttgtaagttgtcattccaaagtattggagtcttaagttgttgatgttgtcca 5760523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 58 - 208
Target Start/End: Original strand, 19808440 - 19808587
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| ||| |||||||||||| |||||||| ||||||||||||||  |||||  |||| |||||||||||||||||  |||  ||  |    
T  19808440 tgtgaaatatttatatgcctcatgtggaaaatgtatgatgtttaagttgttgatgctcttcattaatatttttatgttgtgaattgct--tgtaatg-gt 19808536  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaa 208  Q
    |||||| |||||| ||||| ||||||||||| |||||||||||||||||||    
T  19808537 tctgttgctgttgcatattgatcaagttgcaggtgttggtctaagttgtaa 19808587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 124 - 245
Target Start/End: Complemental strand, 22353013 - 22352887
Alignment:
Q  124 tattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatattaatcaagttgcaagtgttggtctaagtt--------gtaagttgtcg 215  Q
    ||||||||||||||||||||||| |||  ||||| ||||| |||||||||||| ||||||||||| |||||||||||||||        |||||||||||    
T  22353013 tattgttatgttgtgaattgcttgtgt--tgttt-ctgttgctgttgaatattgatcaagttgcaggtgttggtctaagttgtaaagttgtaagttgtcg 22352917  T
Q  216 ttccaaagtattggattcttaagtggttga 245  Q
    ||||||||||||||| |||||||| |||||    
T  22352916 ttccaaagtattggagtcttaagttgttga 22352887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 21976829 - 21976915
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  21976829 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 21976915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Complemental strand, 22111878 - 22111792
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  22111878 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 22111792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Complemental strand, 43251760 - 43251674
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  43251760 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 43251674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 252
Target Start/End: Original strand, 44384821 - 44384946
Alignment:
Q  132 tgttgtgaattgcttatgtgctgttttctgttactgttgaatattaatcaagttgcaagtgttggtct--------aagttgtaagttgtcgttccaaag 223  Q
    |||||||||||||||  ||||||||| ||||| |||||||||||| ||||||||||| ||||||||||        ||||||||||| ||||||||||||    
T  44384821 tgttgtgaattgctt--gtgctgttt-ctgttgctgttgaatattgatcaagttgcaggtgttggtctaagttgtaaagttgtaagtcgtcgttccaaag 44384917  T
Q  224 tattggattcttaagtggttgatgatgtc 252  Q
    ||||||| |||||||  ||||||| ||||    
T  44384918 tattggagtcttaagctgttgatgttgtc 44384946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 137
Target Start/End: Complemental strand, 23659450 - 23659371
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgt 137  Q
    |||||||||||||||| |||||||||||||||| |||||||| ||||||||| || || |||||  ||||||||||||||    
T  23659450 tgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttggtgtttttcattaatattgttatgttgt 23659371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 19278442 - 19278528
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||| ||||||||    
T  19278442 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttctgaattgc 19278528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 18862804 - 18862892
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    ||||||||||||||||  ||||||||||| ||| |||||||| ||||||||||| |||   |||  |||||||||||||||||||||||    
T  18862804 tgtgaaatatttatatgacttatgtggaagatgtatgatgtttaagttgttgatactttatattaatattgttatgttgtgaattgctt 18862892  T

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Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 21410897 - 21410809
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    ||||||||||||||||  ||||||||||| ||| |||||||| ||||||||||| |||   |||  |||||||||||||||||||||||    
T  21410897 tgtgaaatatttatataacttatgtggaagatgtatgatgtttaagttgttgatacttcatattaatattgttatgttgtgaattgctt 21410809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 21805389 - 21805301
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    ||||||||||||||||  ||||||||||| ||| |||||||| ||||||||||| |||   |||  |||||||||||||||||||||||    
T  21805389 tgtgaaatatttatataacttatgtggaagatgtatgatgtttaagttgttgatacttcatattaatattgttatgttgtgaattgctt 21805301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 21828173 - 21828261
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    ||||||||||||||||  ||||||||||| ||| |||||||| ||||||||||| |||   |||  |||||||||||||||||||||||    
T  21828173 tgtgaaatatttatatgacttatgtggaagatgtatgatgtttaagttgttgatactttatattaatattgttatgttgtgaattgctt 21828261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 18302817 - 18302855
Alignment:
Q  166 tgttgaatattaatcaagttgcaagtgttggtctaagtt 204  Q
    |||||||||||||||||||||||||||||||||||||||    
T  18302817 tgttgaatattaatcaagttgcaagtgttggtctaagtt 18302855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 16402080 - 16402133
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgat 111  Q
    |||||||||||||||| | |||||||||||||| |||||||| |||||||||||    
T  16402080 tgtgaaatatttatatgcgttatgtggaaaatgtatgatgtttaagttgttgat 16402133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 254
Target Start/End: Original strand, 22253249 - 22253318
Alignment:
Q  185 tgcaagtgttggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
    |||| |||| |||||||| |||||| |||||||||||||||||||| |||||||  ||||||| ||||||    
T  22253249 tgcatgtgtcggtctaagatgtaagatgtcgttccaaagtattggagtcttaagatgttgatgttgtcca 22253318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 230
Target Start/End: Original strand, 25849309 - 25849358
Alignment:
Q  181 aagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattgga 230  Q
    |||||||||||||||||||||||||||||||||  ||||||| |||||||    
T  25849309 aagttgcaagtgttggtctaagttgtaagttgttattccaaaatattgga 25849358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 23914080 - 23914029
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttg 109  Q
    |||||||||||||||| |||||||||||||||| | |||||| |||||||||    
T  23914080 tgtgaaatatttatatgccttatgtggaaaatgtacgatgtttaagttgttg 23914029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 254
Target Start/End: Original strand, 5083225 - 5083307
Alignment:
Q  172 atattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
    |||||||| ||| |||| |||| ||| |||| |||||| |||||||||||||| ||||| || ||||| ||||||| ||||||    
T  5083225 atattaattaagctgcatgtgtcggtttaagatgtaagatgtcgttccaaagtgttggagtcctaagttgttgatgttgtcca 5083307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 254
Target Start/End: Original strand, 22381796 - 22381885
Alignment:
Q  165 ctgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
    |||||||||||| |  ||| || | |||| |||||||| |||||| |||||| ||||||||||||| ||||||||  |||||| ||||||    
T  22381796 ctgttgaatattgactaagctgaatgtgtcggtctaagatgtaagatgtcgtcccaaagtattggagtcttaagttcttgatgttgtcca 22381885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 13665223 - 13665350
Alignment:
Q  77 ttatgtggaaaatgaatgatgttgaagttgttgatgcttat-cattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatat 175  Q
    ||||| |||| ||| |||||||||||||||||  || |||| |||||   |||||||||| ||| ||| ||||||||||  | |||||  | ||||||||    
T  13665223 ttatgcggaatatgtatgatgttgaagttgttattgtttattcattgacgttgttatgttatgagttgtttatgtgctgcct-ctgttgttattgaatat 13665321  T
Q  176 taatcaagttgcaagtgttggtctaagtt 204  Q
    |||| ||||||||| || |||||||||||    
T  13665322 taattaagttgcaaatggtggtctaagtt 13665350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 13724498 - 13724625
Alignment:
Q  77 ttatgtggaaaatgaatgatgttgaagttgttgatgcttat-cattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatat 175  Q
    ||||| |||| ||| |||||||||||||||||  || |||| |||||   |||||||||| ||| ||| ||||||||||  | |||||  | ||||||||    
T  13724498 ttatgcggaatatgtatgatgttgaagttgttattgtttattcattgacgttgttatgttatgagttgtttatgtgctgcct-ctgttgttattgaatat 13724596  T
Q  176 taatcaagttgcaagtgttggtctaagtt 204  Q
    |||| ||||||||| || |||||||||||    
T  13724597 taattaagttgcaaatggtggtctaagtt 13724625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 247
Target Start/End: Original strand, 17438277 - 17438364
Alignment:
Q  160 tgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatg 247  Q
    |||| |||||| |||||||| ||| |||| |||| ||| |||| ||||||  ||||||||||||| ||||| || ||||| |||||||    
T  17438277 tgtttctgttgtatattaattaagctgcatgtgtcggtttaagatgtaagaggtcgttccaaagtgttggagtcctaagttgttgatg 17438364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 252
Target Start/End: Complemental strand, 16799541 - 16799455
Alignment:
Q  166 tgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    ||||| |||||||||||| |||| |||| ||||| || || | | ||| ||||||||||||| || |||||||| ||||||| ||||    
T  16799541 tgttgtatattaatcaagctgcatgtgtcggtctcagatgaatgatgttgttccaaagtatttgagtcttaagttgttgatgttgtc 16799455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 23669630 - 23669592
Alignment:
Q  166 tgttgaatattaatcaagttgcaagtgttggtctaagtt 204  Q
    |||||||||||||| | ||||||||||||||||||||||    
T  23669630 tgttgaatattaattatgttgcaagtgttggtctaagtt 23669592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 206
Target Start/End: Original strand, 39695388 - 39695416
Alignment:
Q  178 atcaagttgcaagtgttggtctaagttgt 206  Q
    |||||||||||||||||||||||||||||    
T  39695388 atcaagttgcaagtgttggtctaagttgt 39695416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 120; Significance: 2e-61; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 58 - 252
Target Start/End: Complemental strand, 16796528 - 16796337
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| |||||||||||| ||| |||||||| |||||||||||||||  ||||  |||||||||||||||||||||||  |||||||||    
T  16796528 tgtgaaatatttatatgccttatgtggaagatgtatgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgctt--gtgctgttt 16796431  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
     ||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||    
T  16796430 -ctgttgctgttgaatattgatcaagttgcaggtgttggtctaagttgtaagttgtcgttccaaagtattggagtcttaagttgttgatgttgtc 16796337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 58 - 252
Target Start/End: Complemental strand, 324277 - 324078
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||| |||||  ||||||||||||||||||||||  ||||||| ||    
T  324277 tgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttgatgcttttcattaatattgttatgttgtgaattgct--tgtgctg-tt 324181  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtct--------aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgat 249  Q
    |||||| |||||||||||| ||||||||||| ||||||||||        ||||||||||||||||||||||||||||||| |||||||| || |||| |    
T  324180 tctgttgctgttgaatattgatcaagttgcaggtgttggtctaagttgtaaagttgtaagttgtcgttccaaagtattggagtcttaagttgtcgatgtt 324081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 58 - 247
Target Start/End: Original strand, 43889704 - 43889898
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| |||||||| ||||||| |||||||| ||||||||||||  | |||||  ||||||||||||||||||||||  |||| || ||    
T  43889704 tgtgaaatatttatatgccttatgtagaaaatgtatgatgtttaagttgttgatgtctctcattaatattgttatgttgtgaattgct--tgtgttg-tt 43889800  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaag--------ttgtaagttgtcgttccaaagtattggattcttaagtggttgatg 247  Q
    |||||| |||||||||||| ||||||||||| |||||||||||||        |||||||||||||||||||||||||||| |||||||| |||||||    
T  43889801 tctgttgctgttgaatattgatcaagttgcaggtgttggtctaagttgtaaaattgtaagttgtcgttccaaagtattggagtcttaagttgttgatg 43889898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 58 - 252
Target Start/End: Complemental strand, 12469943 - 12469744
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| ||||||||||||||||  ||||||| ||||||||||||||| |||||  |||||||||||||||||||| |  |||| |||||    
T  12469943 tgtgaaatatttatatgccttatgtggaaaatgtgtgatgtttaagttgttgatgcttctcattaatattgttatgttgtgaattggt--tgtgttgttt 12469846  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtct--------aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgat 249  Q
    | |||| |||||||||||| || |||||||| ||||||||||        ||||||||||||||||||| ||||||||||| |||||||| ||||||| |    
T  12469845 t-tgttgctgttgaatatttataaagttgcaggtgttggtctaagttgtaaagttgtaagttgtcgttcaaaagtattggagtcttaagttgttgatgtt 12469747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 58 - 252
Target Start/End: Original strand, 52989800 - 52989999
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||  |||||  ||||||||||||||||||||||  ||| ||| ||    
T  52989800 tgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttgatgctcttcattaatattgttatgttgtgaattgct--tgtactg-tt 52989896  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtct--------aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgat 249  Q
    |||||| |||||| ||||| ||||||||||| ||||||||||        ||||||||||||||| ||||||||||||||| |||||||| ||| ||| |    
T  52989897 tctgttgctgttgcatattgatcaagttgcaggtgttggtctaagttgtaaagttgtaagttgtctttccaaagtattggagtcttaagttgttaatgtt 52989996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 58 - 252
Target Start/End: Original strand, 35961608 - 35961808
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    ||||||||| |||||| |||||||||||||||| |||||||| |||||||||||| || |||||  |||| |||||||| ||||||||  ||||||| ||    
T  35961608 tgtgaaataattatatgccttatgtggaaaatgtatgatgtttaagttgttgatgtttttcattaatatttttatgttgagaattgct--tgtgctg-tt 35961704  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttg---------gtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatga 248  Q
    |||||| |||||||||||| |||||||||||  |||||         ||||||||||||||||||||||||||||||||||| |||||||| |||||||     
T  35961705 tctgttgctgttgaatattgatcaagttgcagatgttggtttaagttgtctaagttgtaagttgtcgttccaaagtattggagtcttaagttgttgatgt 35961804  T
Q  249 tgtc 252  Q
    ||||    
T  35961805 tgtc 35961808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 58 - 252
Target Start/End: Original strand, 11914094 - 11914293
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| | |||||||||||||| |||||||| ||||||||||||||  |||||  ||||||||||||||||||||||  ||| ||||||    
T  11914094 tgtgaaatatttatatgcgttatgtggaaaatgtatgatgttaaagttgttgatgctcttcattaatattgttatgttgtgaattgct--tgtactgttt 11914191  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtct--------aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgat 249  Q
    | |||| |||||| ||||| ||||||||||| ||||||||||        ||||||||||||||| ||||||||||||||| |||||||| ||| ||| |    
T  11914192 t-tgttgctgttgcatattgatcaagttgcaggtgttggtctaagttgtaaagttgtaagttgtctttccaaagtattggagtcttaagttgttaatgtt 11914290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 58 - 208
Target Start/End: Complemental strand, 14966211 - 14966064
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| |||||||||||||||  |||||||| ||||||||||||||  |||||  ||||||||||||||||||||  | ||| ||| ||    
T  14966211 tgtgaaatatttatatgccttatgtggaaaatatatgatgtttaagttgttgatgctcttcattaatattgttatgttgtgaattg--tttgtactg-tt 14966115  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaa 208  Q
    |||||| |||||| ||||| ||||||||||| |||||||||||||||||||    
T  14966114 tctgttgctgttgcatattgatcaagttgcaggtgttggtctaagttgtaa 14966064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 58 - 208
Target Start/End: Original strand, 18700385 - 18700532
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    ||||||||| |||||| |||||||||| ||||| |||||||| ||||| |||||| || |||||  ||||||||||||||||||||||   |||||| ||    
T  18700385 tgtgaaataattatatgccttatgtgggaaatgtatgatgtttaagtttttgatgtttctcattaatattgttatgttgtgaattgct--agtgctg-tt 18700481  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaa 208  Q
    |||||| |||||||||||  ||||||||||| |||||| ||||||||||||    
T  18700482 tctgttgctgttgaatatagatcaagttgcaggtgttgatctaagttgtaa 18700532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 58 - 208
Target Start/End: Original strand, 54876468 - 54876615
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| |||||||||||||||| |||||||| |||||||||| || | || ||  |||||||||||||| |||||||  ||| ||| ||    
T  54876468 tgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttgacgcatttccttaatattgttatgttgtaaattgct--tgtactg-tt 54876564  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaa 208  Q
    |||||| |||||| ||| | ||||||||||| |||||| ||||||||||||    
T  54876565 tctgttgctgttgcataatgatcaagttgcaggtgttgatctaagttgtaa 54876615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 58 - 208
Target Start/End: Original strand, 17691786 - 17691933
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| |||||||||||||||| |||||||| |||||||||| || | || ||  |||||||||||  |||||||||  ||| ||| ||    
T  17691786 tgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttgacgcatttcgttaatattgttatgtgttgaattgct--tgtactg-tt 17691882  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaa 208  Q
    |||||| |||||| ||| | ||||||||||| |||||| ||||||||||||    
T  17691883 tctgttgctgttgcataatgatcaagttgcaggtgttgatctaagttgtaa 17691933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 58 - 208
Target Start/End: Complemental strand, 21837467 - 21837320
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| |||||||||||||||| |||||||| | ||||||||||||| ||||   |||| |||||||||||||  ||  ||| ||| ||    
T  21837467 tgtgaaatatttatatgccttatgtggaaaatgtatgatgtttatgttgttgatgcttttcatgaatattattatgttgtgaatgact--tgtactg-tt 21837371  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaa 208  Q
    |||||| |||||||||||| |||||||||    ||||||||||||||||||    
T  21837370 tctgttgctgttgaatattgatcaagttgttgatgttggtctaagttgtaa 21837320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 12339748 - 12339660
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    |||||||||||||||| |||||||||||| ||| |||||||| |||||||||||||||  ||||  |||||||||||||||||||||||    
T  12339748 tgtgaaatatttatatgccttatgtggaagatgtatgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgctt 12339660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 160 - 252
Target Start/End: Complemental strand, 36527804 - 36527712
Alignment:
Q  160 tgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    |||| |||||| ||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||| ||| ||| ||||    
T  36527804 tgttgctgttgcatattgatcaagttgcaggtgttggtctaagttgtaagttgtctttccaaagtattggaatcttaagttgttaatgttgtc 36527712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 58 - 143
Target Start/End: Complemental strand, 5223346 - 5223261
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattg 143  Q
    |||||||||||||||| |||||||||||| ||| |||||||| |||||||||||||||  ||||  ||||||||||||||||||||    
T  5223346 tgtgaaatatttatatgccttatgtggaagatgtatgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattg 5223261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 4588932 - 4589020
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||||    
T  4588932 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgctt 4589020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 208
Target Start/End: Complemental strand, 17046334 - 17046206
Alignment:
Q  77 ttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatatt 176  Q
    |||||||||| ||  |||||||||||||||| | || ||||| ||  |||||||||| ||||||||| ||  || |||||| ||||| ||||||||||||    
T  17046334 ttatgtggaatatatatgatgttgaagttgtggttgtttatcgttaatattgttatgatgtgaattgatt--gtactgttt-ctgttgctgttgaatatt 17046238  T
Q  177 aatcaagttgcaagtgttggtctaagttgtaa 208  Q
     ||||||||||| |||||||||||||||||||    
T  17046237 gatcaagttgcaggtgttggtctaagttgtaa 17046206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 4111408 - 4111494
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  4111408 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 4111494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Complemental strand, 7109648 - 7109562
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  7109648 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 7109562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Complemental strand, 7113583 - 7113497
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  7113583 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 7113497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Complemental strand, 11070018 - 11069932
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  11070018 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 11069932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 11165688 - 11165774
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  11165688 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 11165774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Complemental strand, 22321614 - 22321528
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  22321614 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 22321528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Complemental strand, 22336669 - 22336583
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  22336669 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 22336583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 191
Target Start/End: Complemental strand, 22652162 - 22652033
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    ||||||||| |||||| | ||||||||||| || |||||||| ||||||||||||||| |||||  || |||||||||||||||||||  |||| || ||    
T  22652162 tgtgaaataattatatgcattatgtggaaa-tgtatgatgtttaagttgttgatgcttttcattaatactgttatgttgtgaattgct--tgtgttg-tt 22652067  T
Q  158 tctgttactgttgaatattaatcaagttgcaagt 191  Q
    ||||||  ||||| ||||| ||||||||||||||    
T  22652066 tctgttgttgttgcatattgatcaagttgcaagt 22652033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 27409803 - 27409889
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  27409803 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 27409889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Complemental strand, 28949674 - 28949588
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  28949674 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 28949588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Complemental strand, 55022817 - 55022731
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  55022817 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 55022731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 58 - 143
Target Start/End: Complemental strand, 15617324 - 15617239
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattg 143  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  ||||||||||||||||||||    
T  15617324 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattg 15617239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 58 - 143
Target Start/End: Complemental strand, 30065896 - 30065811
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattg 143  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  ||||||||||||||||||||    
T  30065896 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattg 30065811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 6805702 - 6805829
Alignment:
Q  77 ttatgtggaaaatgaatgatgttgaagttgttgatgcttat-cattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatat 175  Q
    |||||||||| ||| |||||||||||||||||  || |||| ||||    |||||||||||||| ||| ||||||||||  | |||||  ||||||||||    
T  6805702 ttatgtggaatatgtatgatgttgaagttgttattgtttattcattaaagttgttatgttgtgagttgtttatgtgctgcat-ctgttgttgttgaatat 6805800  T
Q  176 taatcaagttgcaagtgttggtctaagtt 204  Q
    |||| ||||||||||||||||||||||||    
T  6805801 taattaagttgcaagtgttggtctaagtt 6805829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 11300589 - 11300677
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    |||||||||||||||| |||||||||||| ||| |||||||| ||||||||||| |||   |||  |||||||||||||||||||||||    
T  11300589 tgtgaaatatttatatgccttatgtggaagatgtatgatgtttaagttgttgatacttcatattaatattgttatgttgtgaattgctt 11300677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 230
Target Start/End: Complemental strand, 16979201 - 16979089
Alignment:
Q  124 tattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatattaatcaagttgcaagtgttg---------gtctaagttgtaagttgtc 214  Q
    |||||||||||||||||||||||  ||||||||| ||||| |||||||||||| |||||||||||  |||||         |||||||||||||||||||    
T  16979201 tattgttatgttgtgaattgctt--gtgctgttt-ctgttgctgttgaatattgatcaagttgcagatgttggtttaagttgtctaagttgtaagttgtc 16979105  T
Q  215 gttccaaagtattgga 230  Q
    ||||||||||||||||    
T  16979104 gttccaaagtattgga 16979089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 137
Target Start/End: Complemental strand, 16643214 - 16643135
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgt 137  Q
    |||||||||||||||| |||||||||||||||| |||||||| ||||||||| ||||| ||| |  ||||||||||||||    
T  16643214 tgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttggtgcttttcagtaatattgttatgttgt 16643135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 166 - 252
Target Start/End: Original strand, 3265081 - 3265167
Alignment:
Q  166 tgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    ||||| ||||| ||||| | ||| ||||||||||||||||||||||||| ||||||||||||||| |||||||| ||| ||| ||||    
T  3265081 tgttgcatattgatcaattcgcaggtgttggtctaagttgtaagttgtctttccaaagtattggaatcttaagttgttaatgttgtc 3265167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 4107556 - 4107642
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||| ||  ||||  |||||||||||||||||||||    
T  4107556 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgtttcacattaatattgttatgttgtgaattgc 4107642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 37439795 - 37439883
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    ||||||||||||||||  ||||||||||| ||| |||||||| ||||||||||| |||   |||  |||||||||||||||||||||||    
T  37439795 tgtgaaatatttatatgacttatgtggaagatgtatgatgtttaagttgttgatacttcatattaatattgttatgttgtgaattgctt 37439883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 254
Target Start/End: Complemental strand, 324080 - 324022
Alignment:
Q  196 gtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
    ||||||||||||||||||||||||||||||||||| |||||||| || |||| ||||||    
T  324080 gtctaagttgtaagttgtcgttccaaagtattggagtcttaagttgtcgatgttgtcca 324022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 254
Target Start/End: Original strand, 18700592 - 18700650
Alignment:
Q  196 gtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
    ||||||||||||||||||||||||||||||||||| |||||||| || |||| ||||||    
T  18700592 gtctaagttgtaagttgtcgttccaaagtattggaatcttaagttgtcgatgttgtcca 18700650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 197 - 254
Target Start/End: Original strand, 43889902 - 43889959
Alignment:
Q  197 tctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
    |||||||||||||||||||||||||||||||||| |||||||| || |||| ||||||    
T  43889902 tctaagttgtaagttgtcgttccaaagtattggagtcttaagttgtcgatgttgtcca 43889959  T

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Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 252
Target Start/End: Original strand, 10542488 - 10542544
Alignment:
Q  196 gtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    |||||||||||||||||||||||||||||| |||| |||||||| ||||||| ||||    
T  10542488 gtctaagttgtaagttgtcgttccaaagtactggagtcttaagttgttgatgttgtc 10542544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 15964919 - 15964831
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    ||||||||||||||||  ||||||||||| ||| |||||||| ||||||||||| |||   |||  ||||||| |||||||||||||||    
T  15964919 tgtgaaatatttatatgacttatgtggaagatgtatgatgtttaagttgttgatactttatattaatattgttttgttgtgaattgctt 15964831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 15968843 - 15968755
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    ||||||||||||||||  ||||||||||| ||| |||||||| ||||||||||| |||   |||  ||||||| |||||||||||||||    
T  15968843 tgtgaaatatttatatgacttatgtggaagatgtatgatgtttaagttgttgatactttatattaatattgttttgttgtgaattgctt 15968755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 15972767 - 15972679
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    ||||||||||||||||  ||||||||||| ||| |||||||| ||||||||||| |||   |||  ||||||| |||||||||||||||    
T  15972767 tgtgaaatatttatatgacttatgtggaagatgtatgatgtttaagttgttgatactttatattaatattgttttgttgtgaattgctt 15972679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 5841856 - 5841805
Alignment:
Q  196 gtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatg 247  Q
    |||||||||||||||||||||||||||||||||||  ||||||| |||||||    
T  5841856 gtctaagttgtaagttgtcgttccaaagtattggagccttaagttgttgatg 5841805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 254
Target Start/End: Original strand, 10542542 - 10542600
Alignment:
Q  196 gtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
    |||||||||||||||||| |||||||||||||||| |||||||| || |||| ||||||    
T  10542542 gtctaagttgtaagttgttgttccaaagtattggagtcttaagttgtcgatgttgtcca 10542600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 10834188 - 10834250
Alignment:
Q  185 tgcaagtgttggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatg 247  Q
    |||| |||| |||||||| |||||| |||||||||||||||||||| |||||||| |||||||    
T  10834188 tgcatgtgtcggtctaagatgtaagatgtcgttccaaagtattggagtcttaagttgttgatg 10834250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 254
Target Start/End: Complemental strand, 12469746 - 12469688
Alignment:
Q  196 gtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
    ||||||||||||||||||||||||||| ||||||| |||||||| || |||| ||||||    
T  12469746 gtctaagttgtaagttgtcgttccaaattattggagtcttaagttgtcgatgttgtcca 12469688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 144
Target Start/End: Complemental strand, 14499271 - 14499189
Alignment:
Q  62 aaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    ||||||| |||| |||||||||||| |||  ||||||| |||| ||||||||||  ||||  |||||||||||||||||||||    
T  14499271 aaatattaatatgccttatgtggaagatgtttgatgtttaagtggttgatgcttcacattaatattgttatgttgtgaattgc 14499189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 191
Target Start/End: Original strand, 14569043 - 14569168
Alignment:
Q  62 aaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttttctg 161  Q
    |||||| ||||| |||||||||||||||| |||||||| |||  ||||||| || |||||  ||||  ||||||||||||| ||  |||| || ||||||    
T  14569043 aaatatgtatataccttatgtggaaaatgtatgatgttaaag-agttgatgtttgtcattattattcatatgttgtgaattact--tgtgttg-tttctg 14569138  T
Q  162 ttactgttgaatattaatcaagttgcaagt 191  Q
    || |||||||||||| ||||||||| ||||    
T  14569139 ttgctgttgaatattgatcaagttgtaagt 14569168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 143
Target Start/End: Complemental strand, 19775715 - 19775630
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattg 143  Q
    ||||||||||||||||  ||||||||||| ||| |||||||| ||||||||||| |||   |||  ||||| ||||||||||||||    
T  19775715 tgtgaaatatttatatgacttatgtggaagatgtatgatgtttaagttgttgatacttcatattaatattgctatgttgtgaattg 19775630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 11854683 - 11854595
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    |||||||| |||||||  |||||| |||| ||| |||||||| ||||||||||||||    |||  |||||||||||||||||||||||    
T  11854683 tgtgaaatgtttatatgtcttatgaggaagatgtatgatgtttaagttgttgatgctccgtattaatattgttatgttgtgaattgctt 11854595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 252
Target Start/End: Complemental strand, 24513885 - 24513784
Alignment:
Q  159 ctgttactgttgaatattaatcaagttgcaagtgttggtctaagt--------tgtaagttgtcgttccaaagtattggattcttaagtggttgatgatg 250  Q
    ||||| |||||| ||||| ||||||||||| ||||||||||||||        ||||||||||| ||||||||||||||| |||||||| ||| ||| ||    
T  24513885 ctgttgctgttgcatattgatcaagttgcaggtgttggtctaagtggtaaagttgtaagttgtctttccaaagtattggagtcttaagttgttaatgttg 24513786  T
Q  251 tc 252  Q
    ||    
T  24513785 tc 24513784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 252
Target Start/End: Original strand, 32403059 - 32403111
Alignment:
Q  200 aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    |||||||||| |||||||||||||| |||||||||||||| ||||||| ||||    
T  32403059 aagttgtaagatgtcgttccaaagtgttggattcttaagttgttgatgttgtc 32403111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 14670965 - 14670914
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttg 109  Q
    |||||||||||||||| |||||||||||||||| | |||||| |||||||||    
T  14670965 tgtgaaatatttatatgccttatgtggaaaatgtacgatgtttaagttgttg 14670914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 99
Target Start/End: Complemental strand, 15465117 - 15465076
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgtt 99  Q
    |||||||||||||||| |||||||||||||||| ||||||||    
T  15465117 tgtgaaatatttatatgccttatgtggaaaatgtatgatgtt 15465076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 252
Target Start/End: Original strand, 24178747 - 24178799
Alignment:
Q  200 aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    ||||||||||||||| ||||||||||||||| |||||||  ||||||| ||||    
T  24178747 aagttgtaagttgtctttccaaagtattggagtcttaaggtgttgatgttgtc 24178799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 14682464 - 14682413
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttg 109  Q
    |||||||||||||||| |||||||||||||||  | |||||| |||||||||    
T  14682464 tgtgaaatatttatatgccttatgtggaaaattgacgatgtttaagttgttg 14682413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 192 - 239
Target Start/End: Complemental strand, 15206965 - 15206918
Alignment:
Q  192 gttggtctaagttgtaagttgtcgttccaaagtattggattcttaagt 239  Q
    ||||||||||| || |||||||||||||||||||||||| || |||||    
T  15206965 gttggtctaagatgaaagttgtcgttccaaagtattggagtcctaagt 15206918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 15246044 - 15245987
Alignment:
Q  195 ggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    |||||||| || |||||||||||||||||||||||| || ||||| | ||||| ||||    
T  15246044 ggtctaagatgaaagttgtcgttccaaagtattggagtcctaagttgatgatgttgtc 15245987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 252
Target Start/End: Complemental strand, 6808138 - 6808086
Alignment:
Q  200 aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    ||||||||||||||| ||||||||||||| | |||||||| ||| ||| ||||    
T  6808138 aagttgtaagttgtctttccaaagtattgaagtcttaagttgttaatgttgtc 6808086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 209
Target Start/End: Original strand, 14250978 - 14251006
Alignment:
Q  181 aagttgcaagtgttggtctaagttgtaag 209  Q
    |||||||||||||||||||||||||||||    
T  14250978 aagttgcaagtgttggtctaagttgtaag 14251006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 116; Significance: 4e-59; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 13 - 252
Target Start/End: Original strand, 39827907 - 39828145
Alignment:
Q  13 ctgttctgagagtctgaattgaggtgattaaatgttgatcattattgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatg 112  Q
    ||||||||||||||||| ||||| ||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||     
T  39827907 ctgttctgagagtctgagttgagatgattaaatgttgatgatcattgtgaaatatttatataccttatgtggaaaatgaatgatgttgaagttgttaatt 39828006  T
Q  113 cttatcattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttg 212  Q
    |||||||||| ||| |||||| |||||||| | |||||| ||   | |||| |||||| |||||||| ||| |||| |||| ||| |||| || ||| ||    
T  39828007 cttatcattgatatggttatgctgtgaattacctatgtgttg-cctatgttgctgttgtatattaattaagctgcatgtgtcggtttaagatgaaagatg 39828105  T
Q  213 tcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    |||||||||||||||||| |||||||| ||||||| ||||    
T  39828106 tcgttccaaagtattggagtcttaagttgttgatgttgtc 39828145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 58 - 208
Target Start/End: Original strand, 23069361 - 23069508
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||| |||||  ||||||||||||||||||||||  ||||||| ||    
T  23069361 tgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttgatgcttctcattaatattgttatgttgtgaattgct--tgtgctg-tt 23069457  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaa 208  Q
    |||||| |||||||||||| ||||||||||| |||||||||||||||||||    
T  23069458 tctgttgctgttgaatattgatcaagttgcaggtgttggtctaagttgtaa 23069508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 58 - 252
Target Start/End: Original strand, 22459640 - 22459839
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| |||||||||||||||| || ||||||||||||||||||||| |||||  ||||||||||||||||||||||  ||| ||| ||    
T  22459640 tgtgaaatatttatatgccttatgtggaaaatgtataatgttgaagttgttgatgcttttcattaatattgttatgttgtgaattgct--tgtactg-tt 22459736  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtct--------aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgat 249  Q
    || ||| |||||| ||||| ||||||||||| ||||||||||        ||||||||||||||| ||||||||||||||| |||||||| ||| ||| |    
T  22459737 tcggttgctgttgcatattgatcaagttgcaggtgttggtctaagttgtaaagttgtaagttgtctttccaaagtattggaatcttaagttgttaatgtt 22459836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 58 - 252
Target Start/End: Complemental strand, 27472462 - 27472263
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||  |||||  |||| |||||||||||||||||  ||| ||| ||    
T  27472462 tgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttgatgctcttcattaatattattatgttgtgaattgct--tgtactg-tt 27472366  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtct--------aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgat 249  Q
    |||||| |||||| ||||| ||||||||||| ||||||||||        ||||||||||||||| ||||||||||||||| |||||||| ||| ||| |    
T  27472365 tctgttgctgttgcatattgatcaagttgcaggtgttggtctaagttgtaaagttgtaagttgtctttccaaagtattggagtcttaagttgttaatgtt 27472266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 58 - 252
Target Start/End: Original strand, 34874290 - 34874489
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| ||||||||| |||||| |||||||| ||||||||||||||  |||||  ||||||||||||||||||||||  ||| ||| ||    
T  34874290 tgtgaaatatttatatgccttatgtgaaaaatgtatgatgtttaagttgttgatgctcttcattaatattgttatgttgtgaattgct--tgtactg-tt 34874386  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtct--------aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgat 249  Q
    |||||| |||||| ||||| ||||||||||| ||||||||||        ||||||||||||||| ||||||||||||||| |||||||| ||| ||| |    
T  34874387 tctgttgctgttgcatattgatcaagttgcaggtgttggtctaagttgtaaagttgtaagttgtctttccaaagtattggagtcttaagttgttaatgtt 34874486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 58 - 239
Target Start/End: Complemental strand, 24918153 - 24917967
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| | |||||||||||||| |||||||| ||||||||||||||  |||||  ||||||||||||||||||||||  ||| ||| ||    
T  24918153 tgtgaaatatttatatgcgttatgtggaaaatgtatgatgtttaagttgttgatgctcttcattaatattgttatgttgtgaattgct--tgtactg-tt 24918057  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtct--------aagttgtaagttgtcgttccaaagtattggattcttaagt 239  Q
    |||||| |||||| ||||| ||||||||||| ||||||||||        ||||||||||||||| ||||||||||||||| ||||||||    
T  24918056 tctgttgctgttgcatattgatcaagttgcaggtgttggtctaagttgtaaagttgtaagttgtctttccaaagtattggagtcttaagt 24917967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 58 - 252
Target Start/End: Original strand, 23707366 - 23707565
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| | |||||||||||||| |||||||| ||||||||||||||  |||||  ||||||||||||||||||||||  ||| ||  ||    
T  23707366 tgtgaaatatttatatgcattatgtggaaaatgtatgatgtttaagttgttgatgctcttcattaatattgttatgttgtgaattgct--tgtact-att 23707462  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtct--------aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgat 249  Q
    |||||| |||||| ||||| ||||||||||| ||||||||||        ||||||||||||||| ||||||||||||||| |||||||| ||| ||| |    
T  23707463 tctgttgctgttgcatattgatcaagttgcaggtgttggtctaagttgtaaagttgtaagttgtctttccaaagtattggagtcttaagttgttaatgtt 23707562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 57 - 224
Target Start/End: Original strand, 18358810 - 18358975
Alignment:
Q  57 ttgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgtt 156  Q
    ||||||||| ||||||| |||||||||||||||| | |||||| ||||||||||||||| |||||  |||| |||||||||||||| ||  ||||||| |    
T  18358810 ttgtgaaatgtttatatgccttatgtggaaaatgtacgatgtttaagttgttgatgcttttcattaatattattatgttgtgaatttct--tgtgctg-t 18358906  T
Q  157 ttctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgt-aagttgtcgttccaaagt 224  Q
    ||||||| || ||||||||| |||||||||||  |||||||||||||||| |||||||| |||||||||    
T  18358907 ttctgttgctattgaatattgatcaagttgcagatgttggtctaagttgtaaagttgtctttccaaagt 18358975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 58 - 208
Target Start/End: Complemental strand, 24681457 - 24681312
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| | |||||||||||||| |||||||| ||||||||||||||  ||||| |||||||||||||||||||||||  ||| ||| ||    
T  24681457 tgtgaaatatttatatgcgttatgtggaaaatgtatgatgtttaagttgttgatgctcgtcattagtattgttatgttgtgaattgct--tgtactg-tt 24681361  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaa 208  Q
    |||||| ||||||  |||| ||||||||||| |||||||||||||||||||    
T  24681360 tctgttgctgttg--tattgatcaagttgcaggtgttggtctaagttgtaa 24681312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 58 - 208
Target Start/End: Original strand, 21081814 - 21081961
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| ||||||||| |||||| |||||||| ||||| ||||||||  |||||  ||||||||||||||||||||||  ||| ||| ||    
T  21081814 tgtgaaatatttatataccttatgtgaaaaatgtatgatgtttaagttattgatgctcttcattaatattgttatgttgtgaattgct--tgtactg-tt 21081910  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaa 208  Q
    |||||| |||||| ||||| ||||||||||| |||||||||||||||||||    
T  21081911 tctgttgctgttgcatattgatcaagttgcaggtgttggtctaagttgtaa 21081961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 58 - 208
Target Start/End: Complemental strand, 24671038 - 24670891
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    ||||||||||||||||   |||||||||||||| |||||||| ||||||||||||||  |||||  ||||||||||||||||||||||  ||| ||| ||    
T  24671038 tgtgaaatatttatatgggttatgtggaaaatgtatgatgtttaagttgttgatgctcttcattaatattgttatgttgtgaattgct--tgtactg-tt 24670942  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaa 208  Q
    |||||| |||||| ||||| ||||||||||| |||||||||||||||||||    
T  24670941 tctgttgctgttgtatattgatcaagttgcaggtgttggtctaagttgtaa 24670891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 58 - 239
Target Start/End: Complemental strand, 21914954 - 21914767
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    ||||||||| |||||| |||||||||||||||  |||||||| ||||||||||||||| |  ||  ||||||||||||| ||||||||  ||||||| ||    
T  21914954 tgtgaaataattatatgccttatgtggaaaatatatgatgtttaagttgttgatgcttttatttaatattgttatgttgagaattgct--tgtgctg-tt 21914858  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttg---------gtctaagttgtaagttgtcgttccaaagtattggattcttaagt 239  Q
    ||||||  ||||||||||| |||||||||||  |||||         ||||||||||||||||||||||||||||||||||| ||||||||    
T  21914857 tctgttgatgttgaatattgatcaagttgcagatgttggtttaagttgtctaagttgtaagttgtcgttccaaagtattggagtcttaagt 21914767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 58 - 247
Target Start/End: Original strand, 34492212 - 34492407
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    ||||||||| |||||| |||||||||||||||| || ||||| ||||||||||||||| | |||  ||||||||||||| ||||||||  | || || ||    
T  34492212 tgtgaaataattatataccttatgtggaaaatgtataatgtttaagttgttgatgctttttattaatattgttatgttgagaattgct--tctgatg-tt 34492308  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttg---------gtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatg 247  Q
    ||||||  ||||||||||| |||||||||||  |||||         ||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  34492309 tctgttgttgttgaatattgatcaagttgcagatgttggtttaagtcgtctaagttgtaagttgtcgttccaaagtattggagtcttaagttgttgatg 34492407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 12901671 - 12901757
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  12901671 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 12901757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 24628638 - 24628724
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  24628638 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 24628724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Complemental strand, 27601743 - 27601657
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  27601743 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 27601657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 20915353 - 20915226
Alignment:
Q  77 ttatgtggaaaatgaatgatgttgaagttgttgatgcttat-cattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatat 175  Q
    |||||||||| ||| ||||||||| |||||||  || |||| ||||  | |||||||||||||| ||| ||||||| || || |||||  ||||||||||    
T  20915353 ttatgtggaatatgtatgatgttgtagttgttattgtttattcatttatgttgttatgttgtgagttgtttatgtgttgctt-ctgttgttgttgaatat 20915255  T
Q  176 taatcaagttgcaagtgttggtctaagtt 204  Q
    |||| ||||||||||||||||||||||||    
T  20915254 taattaagttgcaagtgttggtctaagtt 20915226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 24316190 - 24316305
Alignment:
Q  85 aaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatattaatcaagt 184  Q
    |||||| |||||||| ||||||| ||||||| |||||  ||||||||||||||||||||||  ||| ||  |||||||| |||||| ||||| |||||||    
T  24316190 aaaatgtatgatgtttaagttgt-gatgcttttcattaatattgttatgttgtgaattgct--tgtact-atttctgttgctgttgcatattgatcaagt 24316285  T
Q  185 tgcaagtgttggtctaagtt 204  Q
    |||| |||||||||||||||    
T  24316286 tgcaggtgttggtctaagtt 24316305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 58 - 144
Target Start/End: Complemental strand, 24649304 - 24649218
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||| | |||||||||||||||  ||||  |||||||||||||||||||||    
T  24649304 tgtgaaatatttatatgccttatgtggaagatgtttgatgcttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 24649218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 27379592 - 27379678
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  ||||||||||||| |||||||    
T  27379592 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgcgaattgc 27379678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 27383638 - 27383724
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  ||||||||||||| |||||||    
T  27383638 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgcgaattgc 27383724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 160 - 254
Target Start/End: Complemental strand, 34137001 - 34136907
Alignment:
Q  160 tgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
    |||| |||||| |||||||| ||| |||| |||| |||||||  |||||| |||||||||||||||||||| |||||||| ||||||| ||||||    
T  34137001 tgttgctgttgtatattaattaagctgcatgtgtcggtctaaaatgtaagatgtcgttccaaagtattggagtcttaagttgttgatgttgtcca 34136907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 58 - 143
Target Start/End: Original strand, 10101804 - 10101889
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattg 143  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||| ||  ||||  ||||||||||||||||||||    
T  10101804 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgtttcacattaatattgttatgttgtgaattg 10101889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 1283336 - 1283248
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    ||||||||||||||||  ||||||||||| ||| |||||||| ||||||||||| |||   |||  |||||||||||||||||||||||    
T  1283336 tgtgaaatatttatatgacttatgtggaagatgtatgatgtttaagttgttgatacttcatattaatattgttatgttgtgaattgctt 1283248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 196 - 252
Target Start/End: Original strand, 13101742 - 13101798
Alignment:
Q  196 gtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||    
T  13101742 gtctaagttgtaagttgtcgttccaaagtattggagtcttaaatggttgatgttgtc 13101798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 30345150 - 30345238
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    ||||||||||||||||  ||||||||||| ||| |||||||| ||||||||||| |||   |||  |||||||||||||||||||||||    
T  30345150 tgtgaaatatttatatgacttatgtggaagatgtatgatgtttaagttgttgatacttcatattaatattgttatgttgtgaattgctt 30345238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 142
Target Start/End: Complemental strand, 31345159 - 31345075
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaatt 142  Q
    |||||||||||||||| |||||||||||| ||| |||||||| |||||||| ||||||  || |  |||||||||||||||||||    
T  31345159 tgtgaaatatttatatgccttatgtggaagatgtatgatgtttaagttgttaatgcttcacactaatattgttatgttgtgaatt 31345075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 41531163 - 41531251
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    ||||||||||||||||  ||||||||||| ||| |||||||| ||||||||||| |||   |||  |||||||||||||||||||||||    
T  41531163 tgtgaaatatttatatgacttatgtggaagatgtatgatgtttaagttgttgatactttatattaatattgttatgttgtgaattgctt 41531251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 105 - 208
Target Start/End: Original strand, 20320723 - 20320823
Alignment:
Q  105 tgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatattaatcaagttgcaagtgttggtctaagtt 204  Q
    ||||||||||| |||||  |||||| ||||||||||||||||  || |||||| |||||  ||||||||| | ||||||||||| |||||||||||| ||    
T  20320723 tgttgatgcttttcattaatattgtcatgttgtgaattgctt--gtactgttt-ctgttgttgttgaatactgatcaagttgcaggtgttggtctaaatt 20320819  T
Q  205 gtaa 208  Q
    ||||    
T  20320820 gtaa 20320823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 247
Target Start/End: Original strand, 21073552 - 21073639
Alignment:
Q  160 tgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatg 247  Q
    |||| |||||| | ||| || ||| |||| |||| |||||||| |||||| |||||||||||||||||||| |||||||| |||||||    
T  21073552 tgttgctgttgtaaattgattaagctgcatgtgtcggtctaagatgtaagatgtcgttccaaagtattggagtcttaagttgttgatg 21073639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 24815437 - 24815562
Alignment:
Q  77 ttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatatt 176  Q
    |||||| ||| ||| ||||||||||| |||||  || |||||||||   |||| ||||||||| ||| ||||||||||  | |||||  |||||||||||    
T  24815437 ttatgtagaatatgtatgatgttgaaattgttattgtttatcattgacgttgt-atgttgtgagttgtttatgtgctgcgt-ctgttgttgttgaatatt 24815534  T
Q  177 aatcaagttgcaagtgttggtctaagtt 204  Q
     || ||||||||||||||||||||||||    
T  24815535 gattaagttgcaagtgttggtctaagtt 24815562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 24834838 - 24834963
Alignment:
Q  77 ttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatatt 176  Q
    |||||||||| ||| ||||||||||| |||||  || |||||||||   |||| |||||||||  || ||||||||||  | || ||  |||||||||||    
T  24834838 ttatgtggaatatgtatgatgttgaaattgttattgtttatcattgacgttgt-atgttgtgagctgtttatgtgctgcct-ctattgttgttgaatatt 24834935  T
Q  177 aatcaagttgcaagtgttggtctaagtt 204  Q
     || ||||||||||||||||||||||||    
T  24834936 gattaagttgcaagtgttggtctaagtt 24834963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 247
Target Start/End: Complemental strand, 9241987 - 9241901
Alignment:
Q  160 tgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatg 247  Q
    |||| |||||| | ||| || ||| |||| |||| |||||||| |||||| |||||| ||||||||||||| |||||||| |||||||    
T  9241987 tgttgctgttgtaaattgattaagctgcatgtgtcggtctaagatgtaagatgtcgt-ccaaagtattggagtcttaagttgttgatg 9241901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 9784724 - 9784673
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttg 109  Q
    |||||||||||||||| |||||||||||||||| | |||||| || ||||||    
T  9784724 tgtgaaatatttatatgccttatgtggaaaatgtacgatgtttaaattgttg 9784673  T

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Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 252
Target Start/End: Original strand, 21081961 - 21082013
Alignment:
Q  200 aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    ||||||||||||||| ||||||||||||||| | |||||| ||| ||| ||||    
T  21081961 aagttgtaagttgtctttccaaagtattggagtgttaagttgttaatgttgtc 21082013  T

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Target: scaffold0347 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 14 - 252
Target Start/End: Complemental strand, 9095 - 8859
Alignment:
Q  14 tgttctgagagtctgaattgaggtgattaaatgttgatcattattgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgc 113  Q
    |||||||||| ||| ||||||| ||| ||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||  || |    
T  9095 tgttctgagaatctaaattgagatgaataaatgttgatgatcattgtgaaatatttatataccttatgtggaaaatgaatgatgttgaagttgtgaattc 8996  T
Q  114 ttatcattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttgt 213  Q
    ||||||||| ||||||||||||||||||| |||||||||||   | |||| |||||| |||||||| ||| |||| |||| |||||||| || | | |||    
T  8995 ttatcattgatattgttatgttgtgaattacttatgtgctg-cctatgttgctgttgtatattaat-aagctgcatgtgtcggtctaagatgaaggatgt 8898  T
Q  214 cgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    ||||||||||||||||| || ||||| ||||||| ||||    
T  8897 cgttccaaagtattggagtcataagttgttgatgttgtc 8859  T

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Target: chr5 (Bit Score: 103; Significance: 3e-51; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 62 - 252
Target Start/End: Original strand, 22107516 - 22107711
Alignment:
Q  62 aaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttttctg 161  Q
    |||||||||||| |||||||||||||||| |||||||| ||||||||||||||| |||||  ||||||||||||||||||||||  ||||||| ||||||    
T  22107516 aaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttgatgcttctcattaatattgttatgttgtgaattgct--tgtgctg-tttctg 22107612  T
Q  162 ttactgttgaatattaatcaagttgcaagtgttggtct--------aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    || |||||||||||| ||||||||||| ||||||||||        ||||||||||||||||||||||||||||||| |||||||| ||||||| ||||    
T  22107613 ttgctgttgaatattgatcaagttgcaggtgttggtctaagttgtaaagttgtaagttgtcgttccaaagtattggagtcttaagttgttgatgttgtc 22107711  T

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Target: chr5; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 58 - 252
Target Start/End: Complemental strand, 17011057 - 17010857
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    ||||||||| |||||| |||||||||||||||| |||||||| |||||||||||| || |||||  ||||||||||||||||||||||  |||||||  |    
T  17011057 tgtgaaataattatatgccttatgtggaaaatgtatgatgtttaagttgttgatgtttttcattaatattgttatgttgtgaattgct--tgtgctg-ct 17010961  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttg---------gtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatga 248  Q
    |||||| |||||||||||| |||||||||||  |||||         ||||||||||||||||| ||||||||||||||||| |||||||| |||||||     
T  17010960 tctgttgctgttgaatattgatcaagttgcagatgttggtttaagttgtctaagttgtaagttgccgttccaaagtattggagtcttaagttgttgatgt 17010861  T
Q  249 tgtc 252  Q
    ||||    
T  17010860 tgtc 17010857  T

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Target: chr5; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 57 - 239
Target Start/End: Original strand, 33895722 - 33895909
Alignment:
Q  57 ttgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgtt 156  Q
    ||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||  |||||  ||||||||||||||||| ||||  ||||||| |    
T  33895722 ttgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttgatgctcttcattaatattgttatgttgtgaactgct--tgtgctg-t 33895818  T
Q  157 ttctgttactgttgaatattaatcaagttgcaagtgttggtctaagtt--------gtaagttgtcgttccaaagtattggattcttaagt 239  Q
    || |||| |||||| ||||| ||||||||||| || ||||||||||||        ||||||||| |||||||||||||||| ||||||||    
T  33895819 ttatgttgctgttgcatattgatcaagttgcaggtattggtctaagttgtaaagtcgtaagttgttgttccaaagtattggagtcttaagt 33895909  T

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Target: chr5; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 58 - 208
Target Start/End: Complemental strand, 6765871 - 6765724
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||| ||||||| |||||||||||||||| |||||||| ||||||||||| ||| |||||  ||||||||||||||||||||||  ||| ||| ||    
T  6765871 tgtgaaatgtttatatgccttatgtggaaaatgtatgatgtttaagttgttgatacttttcattaatattgttatgttgtgaattgct--tgtactg-tt 6765775  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaa 208  Q
    |||||| |||||| ||||| |||||| |||| |||||||||||||||||||    
T  6765774 tctgttgctgttgcatattgatcaagatgcatgtgttggtctaagttgtaa 6765724  T

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Target: chr5; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 58 - 239
Target Start/End: Complemental strand, 263189 - 263003
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    ||||||||| |||| | |||||||||||||||| |||||||| |||||||||||| || |||||  ||||||||||||||||||||||  ||||||| ||    
T  263189 tgtgaaataattatgtgccttatgtggaaaatgtatgatgtttaagttgttgatgtttttcattaatattgttatgttgtgaattgct--tgtgctg-tt 263093  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagt--------tgtaagttgtcgttccaaagtattggattcttaagt 239  Q
    ||||||  ||||| ||||  ||||||||||| || | |||||||||        ||||||||||| ||||||||||||||| ||||||||    
T  263092 tctgttgttgttgcatatagatcaagttgcaggtataggtctaagttgtaaaaatgtaagttgtctttccaaagtattggagtcttaagt 263003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 58 - 252
Target Start/End: Complemental strand, 29448046 - 29447847
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttg-ttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgtt 156  Q
    ||||||||| |||||| ||||||||||||| || || ||||| || ||| ||||||||| |||||  ||||||||||||||||||||||  |||| ||      
T  29448046 tgtgaaataattatatgccttatgtggaaa-tgtataatgtttaaattgattgatgcttttcattaatattgttatgttgtgaattgct--tgtgttg-c 29447951  T
Q  157 ttctgttactgttgaatattaatcaagttgcaagtgttggtct--------aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatga 248  Q
    | |||||  |||||| |||| || |||||||| ||||||||||        ||||||||||||||| ||||||||||||||| |||||||| |||||||     
T  29447950 tcctgttgatgttgagtattgattaagttgcaggtgttggtctaagttgtaaagttgtaagttgtctttccaaagtattggagtcttaagttgttgatgt 29447851  T

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Target: chr5; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 15236994 - 15237080
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  15236994 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 15237080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 19472879 - 19472965
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  19472879 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 19472965  T

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Target: chr5; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Complemental strand, 20295794 - 20295708
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  20295794 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 20295708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 58 - 143
Target Start/End: Complemental strand, 18356239 - 18356154
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattg 143  Q
    |||||||||||||||| |||||||||||| ||| ||||||||  ||||||||||||||  ||||  ||||||||||||||||||||    
T  18356239 tgtgaaatatttatatgccttatgtggaagatgtatgatgtttgagttgttgatgcttcacattaatattgttatgttgtgaattg 18356154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 58 - 143
Target Start/End: Original strand, 20910994 - 20911079
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattg 143  Q
    ||||||||||||||||  ||||||||||| ||| |||||||| |||||||||||||||  ||||  ||||||||||||||||||||    
T  20910994 tgtgaaatatttatatgtcttatgtggaagatgtatgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattg 20911079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 40723746 - 40723834
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    |||||||||||||||| |||||||||||| ||| |||||||| ||||||||||| |||   | | ||||||||||||||||||||||||    
T  40723746 tgtgaaatatttatatgccttatgtggaagatgtatgatgtttaagttgttgatacttcataatagtattgttatgttgtgaattgctt 40723834  T

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Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 10753311 - 10753223
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    ||||||||||||||||  ||||||||||| ||| |||||||| ||||||||||| |||   |||  ||||| |||||||||||||||||    
T  10753311 tgtgaaatatttatatgacttatgtggaagatgtatgatgtttaagttgttgatacttcatattaatattgctatgttgtgaattgctt 10753223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 252
Target Start/End: Complemental strand, 23469864 - 23469772
Alignment:
Q  160 tgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    |||| |||||| |||||||| ||| |||| | || |||||||| |||||| |||||||||||||| ||||| |||||||| ||||||| ||||    
T  23469864 tgttgctgttgtatattaattaagctgcatgagtcggtctaagatgtaagatgtcgttccaaagtgttggagtcttaagttgttgatgttgtc 23469772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 121
Target Start/End: Original strand, 20910875 - 20910937
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcatt 121  Q
    |||||||||||||||| |||||| ||||||||| |||||||  ||||||||| || ||||||||    
T  20910875 tgtgaaatatttatatgccttat-tggaaaatgtatgatgtataagttgttgttgattatcatt 20910937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 41861565 - 41861614
Alignment:
Q  203 ttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    |||||||||||| ||||||||||||||| |||||||| ||| ||| ||||    
T  41861565 ttgtaagttgtctttccaaagtattggaatcttaagttgttaatgttgtc 41861614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 252
Target Start/End: Complemental strand, 24212369 - 24212317
Alignment:
Q  200 aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    ||||||||||||||| || |||||||||||| |||||||| ||| ||| ||||    
T  24212369 aagttgtaagttgtcttttcaaagtattggagtcttaagttgttaatgttgtc 24212317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 252
Target Start/End: Complemental strand, 35852624 - 35852572
Alignment:
Q  200 aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    ||||||||||||||| || |||||||||||| |||||||| ||| ||| ||||    
T  35852624 aagttgtaagttgtcttttcaaagtattggagtcttaagttgttaatgttgtc 35852572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 100; Significance: 2e-49; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 13 - 252
Target Start/End: Original strand, 38065 - 38303
Alignment:
Q  13 ctgttctgagagtctgaattgaggtgattaaatgttgatcattattgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatg 112  Q
    ||||||||||||||||||||||| | ||| ||||||||| || ||||||||||||||||||  ||||| || |||||||||||||||||||||||| ||     
T  38065 ctgttctgagagtctgaattgagattattgaatgttgatgatcattgtgaaatatttatataacttatatgaaaaatgaatgatgttgaagttgttaatt 38164  T
Q  113 cttatcattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttg 212  Q
    |||||||||| |||  ||||| |||||||| | |||||||||   | |||| |||||| |||||||| ||| |||| |||| |||||||| || ||| ||    
T  38165 cttatcattgatatgcttatgctgtgaattacctatgtgctg-cctatgttgctgttgtatattaattaagctgcatgtgtcggtctaagatgaaagatg 38263  T
Q  213 tcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    | |||||||||||||||| |||||||| ||||||| ||||    
T  38264 ttgttccaaagtattggagtcttaagttgttgatgttgtc 38303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 58 - 208
Target Start/End: Complemental strand, 125998 - 125851
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||| |||||  ||||||||||||||||||||||  ||||||| ||    
T  125998 tgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttgatgcttctcattaatattgttatgttgtgaattgct--tgtgctg-tt 125902  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaa 208  Q
    |||||| |||||||||||| ||||||||||| |||||||||||||||||||    
T  125901 tctgttgctgttgaatattgatcaagttgcaggtgttggtctaagttgtaa 125851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 254
Target Start/End: Complemental strand, 125791 - 125733
Alignment:
Q  196 gtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
    ||||||||||||||||||||||||||||||||||| |||||||| || |||| ||||||    
T  125791 gtctaagttgtaagttgtcgttccaaagtattggagtcttaagttgtcgatgttgtcca 125733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 98; Significance: 2e-48; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 58 - 252
Target Start/End: Complemental strand, 21209 - 21025
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||| ||| |  ||||||||||||||||||||||  |||||| |||    
T  21209 tgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttgatgcttctcagtaatattgttatgttgtgaattgct--tgtgctattt 21112  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    | |||| |||||||||||||||||||||||| |||||||||       ||||||||||||||||||||||||| |||||||| ||||||| ||||    
T  21111 t-tgttgctgttgaatattaatcaagttgcaggtgttggtc-------taagttgtcgttccaaagtattggagtcttaagttgttgatgttgtc 21025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 254
Target Start/End: Complemental strand, 21027 - 20969
Alignment:
Q  196 gtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
    |||||||||||||||||| |||||||||||||||| |||||||| || |||| ||||||    
T  21027 gtctaagttgtaagttgttgttccaaagtattggagtcttaagttgtcgatgttgtcca 20969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 96; Significance: 4e-47; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 13 - 252
Target Start/End: Complemental strand, 497633 - 497395
Alignment:
Q  13 ctgttctgagagtctgaattgaggtgattaaatgttgatcattattgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatg 112  Q
    ||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||     
T  497633 ctgttctgagagtctgaattgagatgattaaatgttgatgatcattgtgaaatatttatataacttatgtggaaaatgaatgatgttgaagttgttaatt 497534  T
Q  113 cttatcattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttg 212  Q
    | ||| |||| ||| |||||| |||||||| | |||||||||   | ||||  ||||| |||||||  ||| |||| |||| ||| |||| || ||| ||    
T  497533 cctataattgatatggttatgctgtgaattacctatgtgctg-cctatgttgttgttgtatattaactaagctgcatgtgtcggtttaagatgaaagatg 497435  T
Q  213 tcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    |||||| ||||||||| | |||||||| ||||||| ||||    
T  497434 tcgttctaaagtattgaagtcttaagttgttgatgttgtc 497395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 446637 - 446510
Alignment:
Q  77 ttatgtggaaaatgaatgatgttgaagttgttgatgcttat-cattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatat 175  Q
    |||||||||| ||| |||||||||||||||||  || |||| |||||   ||| ||||||||||  || ||||||| || || |||||  ||||||||||    
T  446637 ttatgtggaatatgtatgatgttgaagttgttattgtttattcattgacgttgatatgttgtgagctgtttatgtgttgctt-ctgttgttgttgaatat 446539  T
Q  176 taatcaagttgcaagtgttggtctaagtt 204  Q
    |||| ||||||||||||||||||||||||    
T  446538 taattaagttgcaagtgttggtctaagtt 446510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 4e-44; HSPs: 57)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 58 - 227
Target Start/End: Original strand, 19773620 - 19773785
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||  ||||  ||||||||||||||||||||||  |||| || ||    
T  19773620 tgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgct--tgtgttg-tt 19773716  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtatt 227  Q
    |||||| |||||||||||| ||||||||| | ||||| |||||||||||||||| |||||||||||||||    
T  19773717 tctgttgctgttgaatattgatcaagttgtaggtgtt-gtctaagttgtaagttatcgttccaaagtatt 19773785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 58 - 208
Target Start/End: Complemental strand, 22805975 - 22805828
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||| |||||  ||||||||||||||||||||||   ||| || ||    
T  22805975 tgtgaaatatttatattcgttatgtggaaaatgtatgatgtttaagttgttgatgcttctcattaatattgttatgttgtgaattgct--cgtgttg-tt 22805879  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaa 208  Q
    |||||| |||||||||||| ||||||||||| |||||||||||||||||||    
T  22805878 tctgttgctgttgaatattgatcaagttgcaggtgttggtctaagttgtaa 22805828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 58 - 252
Target Start/End: Complemental strand, 17743420 - 17743221
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| |||||||||||||||| |||||||| ||||||||||| ||| |||||  ||||||||||||||||||||||  |||| || ||    
T  17743420 tgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttgatacttctcattaatattgttatgttgtgaattgct--tgtgttg-tt 17743324  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaa--------gttgtcgttccaaagtattggattcttaagtggttgatgat 249  Q
    ||| || |||||||| ||| ||||||||||| |||||||||||||||| ||        |||||||||||||||||||||| |||||||| ||||||| |    
T  17743323 tctattgctgttgaagattgatcaagttgcaggtgttggtctaagttgcaaagttgcaggttgtcgttccaaagtattggagtcttaagttgttgatgtt 17743224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 58 - 254
Target Start/End: Original strand, 15705521 - 15705722
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    ||||||||||||||||  ||||||||||||||| |||||||  |||||| |||||||| |||||  ||||||||||||||||||||||  ||||||| ||    
T  15705521 tgtgaaatatttatatgtcttatgtggaaaatgtatgatgtataagttgatgatgcttctcattaatattgttatgttgtgaattgct--tgtgctg-tt 15705617  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtct--------aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgat 249  Q
    |||||| ||||| |||||| ||||||||||| ||||||||||        ||||||||||||||||||||||||||||||| |||||| | || |||| |    
T  15705618 tctgttgctgtttaatattgatcaagttgcaggtgttggtctaagttgtaaagttgtaagttgtcgttccaaagtattggagtcttaaattgtcgatgtt 15705717  T
Q  250 gtcca 254  Q
    |||||    
T  15705718 gtcca 15705722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 58 - 252
Target Start/End: Complemental strand, 18913988 - 18913788
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    ||||||||| |||||| |||||||||||||||| |||||||| |||||||||||| || |||||  ||||||||||||| ||||||||  ||||||| ||    
T  18913988 tgtgaaataattatatgccttatgtggaaaatgtatgatgtttaagttgttgatgtttttcattaatattgttatgttgagaattgct--tgtgctg-tt 18913892  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttg---------gtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatga 248  Q
    |||||| |||||||||||| || ||||||||  |||||         ||||||||||||||||||||||||||||||||||| |||||||| |||||||     
T  18913891 tctgttgctgttgaatattgattaagttgcagatgttggtttaagttgtctaagttgtaagttgtcgttccaaagtattggagtcttaagttgttgatgt 18913792  T
Q  249 tgtc 252  Q
    ||||    
T  18913791 tgtc 18913788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 58 - 252
Target Start/End: Complemental strand, 18937246 - 18937046
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    ||||||||| |||||| |||||||||||||||| |||||||| |||||||||||| || |||||  ||||||||||||| ||||||||  ||||||| ||    
T  18937246 tgtgaaataattatatgccttatgtggaaaatgtatgatgtttaagttgttgatgtttttcattaatattgttatgttgagaattgct--tgtgctg-tt 18937150  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttg---------gtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatga 248  Q
    |||||| |||||||||||| || ||||||||  |||||         ||||||||||||||||||||||||||||||||||| |||||||| |||||||     
T  18937149 tctgttgctgttgaatattgattaagttgcagatgttggtttaagttgtctaagttgtaagttgtcgttccaaagtattggagtcttaagttgttgatgt 18937050  T
Q  249 tgtc 252  Q
    ||||    
T  18937049 tgtc 18937046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 58 - 252
Target Start/End: Original strand, 15174175 - 15174375
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    ||||||||| ||||||  ||||||||||||||| |||||||| ||||||||||||||| |||||  ||||||||||||| ||||| ||  ||||||  ||    
T  15174175 tgtgaaataattatatgacttatgtggaaaatgtatgatgtttaagttgttgatgcttttcattaatattgttatgttgagaattact--tgtgct-att 15174271  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttg---------gtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatga 248  Q
    | |||| |||||||||||| |||||||||||  |||||         ||||||||||||||||||||||||||||||||||| |||||||| |||||||     
T  15174272 tatgttgctgttgaatattgatcaagttgcagatgttggtttaagttgtctaagttgtaagttgtcgttccaaagtattggagtcttaagttgttgatgt 15174371  T
Q  249 tgtc 252  Q
    ||||    
T  15174372 tgtc 15174375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 58 - 239
Target Start/End: Original strand, 15817599 - 15817783
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    ||||||||| ||||||  ||||||||||||||| |||||||| |||| |||||||||| |||||  ||||||||||||||||||||||| ||||    ||    
T  15817599 tgtgaaataattatatgtcttatgtggaaaatgtatgatgtttaagtagttgatgcttttcattaatattgttatgttgtgaattgcttttgtg----tt 15817694  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtct--------aagttgtaagttgtcgttccaaagtattggattcttaagt 239  Q
    |||  | |||||||||||| ||||||||||| ||||||||||        ||||||||||||||||||||||||||||||| ||||||||    
T  15817695 tct-atgctgttgaatattgatcaagttgcaggtgttggtctaagttgtaaagttgtaagttgtcgttccaaagtattggagtcttaagt 15817783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 58 - 252
Target Start/End: Original strand, 28103976 - 28104176
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||  |||||  ||||||||||||||||||||||  ||| ||| ||    
T  28103976 tgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttgatgctcttcattaatattgttatgttgtgaattgct--tgtactg-tt 28104072  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtct---------aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatga 248  Q
    ||||||  ||||| ||||| |||||||| || ||||||||||         ||||||||||||||| |||||||||||| || |||||||| ||| |||     
T  28104073 tctgttgttgttgcatattgatcaagtttcaggtgttggtctaagtttgtaaagttgtaagttgtctttccaaagtatttgagtcttaagttgttaatgt 28104172  T
Q  249 tgtc 252  Q
    ||||    
T  28104173 tgtc 28104176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 77 - 254
Target Start/End: Original strand, 19656109 - 19656291
Alignment:
Q  77 ttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatatt 176  Q
    |||||||||| ||| |||||||||||||||| | || ||||| ||  |||||||||| ||||||||||  ||||| ||||| ||||| ||||||||||||    
T  19656109 ttatgtggaatatgtatgatgttgaagttgtggttgtttatcgttaatattgttatgatgtgaattgc--atgtgttgttt-ctgttgctgttgaatatt 19656205  T
Q  177 aatcaagttgcaagtgttggtc--------taagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
     |||||||||||||||||||||         ||||||||||||||| ||||||||||||||| |||||||| ||||||| ||||||    
T  19656206 gatcaagttgcaagtgttggtcaaagttgtaaagttgtaagttgtcattccaaagtattggagtcttaagttgttgatgttgtcca 19656291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 58 - 208
Target Start/End: Complemental strand, 15875426 - 15875279
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    ||||||||| ||||||  ||||||||||||||| |||||||| |||||||||||  || |||||  ||||||||||||||||||||||  |||| || ||    
T  15875426 tgtgaaataattatatgtcttatgtggaaaatgtatgatgtttaagttgttgataattttcattaatattgttatgttgtgaattgct--tgtgttg-tt 15875330  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaa 208  Q
    |||||| |||||  ||||| ||||||||||||||||||||||| |||||||    
T  15875329 tctgttgctgttacatattgatcaagttgcaagtgttggtctatgttgtaa 15875279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 58 - 252
Target Start/End: Original strand, 17377875 - 17378074
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| | |||||||||||||| |||||||| |||||||| ||| |  |||||  ||||||||||||||||||||||  |||  || ||    
T  17377875 tgtgaaatatttatatgcgttatgtggaaaatgtatgatgtttaagttgtttatgttcttcattaatattgttatgttgtgaattgct--tgtattg-tt 17377971  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtct--------aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgat 249  Q
    ||||||  ||||| ||||| ||||||||||| ||||||||||        ||||||||||||||| ||||||||||||||| |||||||| ||| ||| |    
T  17377972 tctgttgttgttgtatattgatcaagttgcaggtgttggtctaagttgtaaagttgtaagttgtctttccaaagtattggagtcttaagttgttaatgtt 17378071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 27416017 - 27416105
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    |||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||  ||||  |||||||||||||||||||||||    
T  27416017 tgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgctt 27416105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 23414927 - 23414839
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    |||||||||||||||| |||||||||||| ||| |||||||| |||||||||||||||  ||||  |||||||||||||||||||||||    
T  23414927 tgtgaaatatttatatgccttatgtggaagatgtatgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgctt 23414839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 27556685 - 27556597
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    |||||||||||||||| |||||||||||| ||| |||||||| |||||||||||||||  ||||  |||||||||||||||||||||||    
T  27556685 tgtgaaatatttatatgccttatgtggaagatgtatgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgctt 27556597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 77 - 210
Target Start/End: Original strand, 18259926 - 18260058
Alignment:
Q  77 ttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggt-attgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatat 175  Q
    |||||||||||||| |||||||| ||||||||| || ||||||||| | ||||||||||||||| | ||||||||| ||| | ||| |  || |||||||    
T  18259926 ttatgtggaaaatgtatgatgttcaagttgttgttgattatcattgatcattgttatgttgtgagt-gcttatgtgatgtct-ctgctgttgctgaatat 18260023  T
Q  176 taatcaagttgcaagtgttggtctaagttgtaagt 210  Q
    |||| ||||||||||||||||||||||||| ||||    
T  18260024 taattaagttgcaagtgttggtctaagttgcaagt 18260058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 18917425 - 18917513
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||||    
T  18917425 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgctt 18917513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Complemental strand, 8243808 - 8243722
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  8243808 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 8243722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Complemental strand, 11566809 - 11566723
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  11566809 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 11566723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Complemental strand, 19870537 - 19870451
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  19870537 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 19870451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Complemental strand, 23395015 - 23394929
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  23395015 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 23394929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 144
Target Start/End: Complemental strand, 23989866 - 23989781
Alignment:
Q  59 gtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    ||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  23989866 gtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 23989781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 58 - 136
Target Start/End: Original strand, 14979465 - 14979543
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttg 136  Q
    |||||||||||||||| |||||||||||||||| |||||||| ||||||||| || || |||||  |||||||||||||    
T  14979465 tgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttggtgattttcattaatattgttatgttg 14979543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 58 - 140
Target Start/End: Complemental strand, 22862893 - 22862811
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaa 140  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||    
T  22862893 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaa 22862811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 77 - 201
Target Start/End: Original strand, 22376654 - 22376778
Alignment:
Q  77 ttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggt-attgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatat 175  Q
    ||||||| |||||| |||||||||| ||||||| || ||| ||||| | ||||||||||||||| ||||||| ||||||   |||| |  ||||||||||    
T  22376654 ttatgtgaaaaatgtatgatgttgaggttgttgttgattaccattgattattgttatgttgtgagttgcttacgtgctg-cctctgctgttgttgaatat 22376752  T
Q  176 taatcaagttgcaagtgttggtctaa 201  Q
    | || |||||||||||||||||||||    
T  22376753 tgattaagttgcaagtgttggtctaa 22376778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 22949055 - 22948967
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    ||||||||||||||||  ||||||||||| ||| |||||||| ||||||||||| |||   |||  |||||||||||||||||||||||    
T  22949055 tgtgaaatatttatataacttatgtggaagatgtatgatgtttaagttgttgatactttatattaatattgttatgttgtgaattgctt 22948967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 31477969 - 31478057
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    ||||||||||||||||  ||||||||||| ||| |||||||| ||||||||||| |||   |||  |||||||||||||||||||||||    
T  31477969 tgtgaaatatttatatgacttatgtggaagatgtatgatgtttaagttgttgatacttcatattaatattgttatgttgtgaattgctt 31478057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 18955922 - 18956008
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| ||| |||||||| ||||||||||| |||   | |  |||||||||||||||||||||    
T  18955922 tgtgaaatatttatatgccttatgtggaagatgtatgatgtttaagttgttgatacttcataataatattgttatgttgtgaattgc 18956008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 230
Target Start/End: Original strand, 23083039 - 23083200
Alignment:
Q  77 ttatgtggaaaatgaatgatgttgaagttgttgatgcttat-cattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatat 175  Q
    |||||||||| |||  ||||||||||||||||  || |||| ||||| | || |||||||||||  || ||||||||||  | || ||  ||||||||||    
T  23083039 ttatgtggaatatgtctgatgttgaagttgttattgtttattcattgatgttattatgttgtgagctgtttatgtgctgcct-ctattgttgttgaatat 23083137  T
Q  176 taatcaagttgcaagtgttggtct--------aagttgtaagttgtcgttccaaagtattgga 230  Q
    |||| |||||||||||||||||||        |||||||||| ||||||||||||||||||||    
T  23083138 taattaagttgcaagtgttggtctaagttacaaagttgtaagatgtcgttccaaagtattgga 23083200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 157
Target Start/End: Complemental strand, 14472218 - 14472121
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| |||||||||||| ||| || ||||||||||| ||||| |||   | |  |||||||||||||||||||||  |||||||||||    
T  14472218 tgtgaaatatttatatgccttatgtggaagatgtataatgttgaagttattgatacttcataataatattgttatgttgtgaattgc--atgtgctgttt 14472121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 16760242 - 16760154
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    ||||||||||||||||  ||||||||||| ||  |||||||| ||||||||||| |||   |||  |||||||||||||||||||||||    
T  16760242 tgtgaaatatttatatgacttatgtggaagatatatgatgtttaagttgttgatactttatattaatattgttatgttgtgaattgctt 16760154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 20411538 - 20411665
Alignment:
Q  77 ttatgtggaaaatgaatgatgttgaagttgttgatgcttat-cattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatat 175  Q
    |||||||||| ||| ||||||||| |||||||  || |||| ||||    ||||||||||||||  || ||||||||||  | |||||  ||||||||||    
T  20411538 ttatgtggaatatgtatgatgttggagttgttattgtttattcattaacgttgttatgttgtgagctgtttatgtgctgcct-ctgttgttgttgaatat 20411636  T
Q  176 taatcaagttgcaagtgttggtctaagtt 204  Q
    |||| ||||||||||||||||||||||||    
T  20411637 taattaagttgcaagtgttggtctaagtt 20411665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 22953011 - 22952923
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    ||||||||||||||||  ||||||||||| ||| |||||||| ||||||||||| |||   |||  ||||||||||||| |||||||||    
T  22953011 tgtgaaatatttatataacttatgtggaagatgtatgatgtttaagttgttgatactttatattaatattgttatgttgagaattgctt 22952923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 23871499 - 23871411
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    ||||||||||||||||  ||||||||||| ||| |||||||| ||||||||||| |||   |||  ||||||||||||| |||||||||    
T  23871499 tgtgaaatatttatataacttatgtggaagatgtatgatgtttaagttgttgatactttatattaatattgttatgttgagaattgctt 23871411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 23875455 - 23875367
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    ||||||||||||||||  ||||||||||| ||| |||||||| ||||||||||| |||   |||  ||||||||||||| |||||||||    
T  23875455 tgtgaaatatttatataacttatgtggaagatgtatgatgtttaagttgttgatactttatattaatattgttatgttgagaattgctt 23875367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 28708549 - 28708498
Alignment:
Q  196 gtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatg 247  Q
    |||||||||||||||||||||||||||||||||||  ||||||| |||||||    
T  28708549 gtctaagttgtaagttgtcgttccaaagtattggagccttaagttgttgatg 28708498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 254
Target Start/End: Complemental strand, 17743223 - 17743165
Alignment:
Q  196 gtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
    ||||||||| ||||||||||||||||||||||||| |||||||| || |||| ||||||    
T  17743223 gtctaagttttaagttgtcgttccaaagtattggagtcttaagttgtcgatgttgtcca 17743165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 254
Target Start/End: Complemental strand, 18453243 - 18453149
Alignment:
Q  160 tgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
    |||| |||||| |||||||| ||| ||||   || |||||||| |||||| ||||||| |||||||||||| |||||||| ||||||| ||||||    
T  18453243 tgttgctgttgtatattaattaagctgcataagtcggtctaagatgtaagatgtcgtttcaaagtattggagtcttaagttgttgatgttgtcca 18453149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 18696530 - 18696480
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgtt 108  Q
    |||||||||||||||| |||||||||||||||| |||||||| ||||||||    
T  18696530 tgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgtt 18696480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 252
Target Start/End: Original strand, 20078236 - 20078322
Alignment:
Q  166 tgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    ||||||||||| |  |||||| | |||| |||||||| |||||| ||||||||||||||| |||| |||||||| ||||||| ||||    
T  20078236 tgttgaatattgactaagttgtatgtgtcggtctaagatgtaagatgtcgttccaaagtactggagtcttaagttgttgatgttgtc 20078322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 1644655 - 1644567
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    ||||||||| |||||| |||||||||||| |||  ||||||| ||||||||||| |||   | |  |||||||||||||||||||||||    
T  1644655 tgtgaaatacttatatgccttatgtggaagatgtttgatgtttaagttgttgatacttcataataatattgttatgttgtgaattgctt 1644567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 252
Target Start/End: Complemental strand, 22420968 - 22420916
Alignment:
Q  200 aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    ||||||||||||||| ||||||||||||||| |||||||| ||| ||||||||    
T  22420968 aagttgtaagttgtctttccaaagtattggagtcttaagttgttaatgatgtc 22420916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 12619003 - 12619087
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||| |  ||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||| ||||||||||    
T  12619003 tgtgaaatatttatgt--cttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgctgtgaattgc 12619087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 105
Target Start/End: Complemental strand, 18706348 - 18706301
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagtt 105  Q
    |||||||||||||||| |||||||||||||||| |||||||| |||||    
T  18706348 tgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagtt 18706301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 222
Target Start/End: Complemental strand, 20136719 - 20136668
Alignment:
Q  171 aatattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaa 222  Q
    |||||||||||||||||| ||||||||||||| |||||| ||| ||||||||    
T  20136719 aatattaatcaagttgcatgtgttggtctaagatgtaagatgttgttccaaa 20136668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 222
Target Start/End: Original strand, 22196150 - 22196201
Alignment:
Q  171 aatattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaa 222  Q
    |||||||||||||||||| ||||||||||||| |||||| ||| ||||||||    
T  22196150 aatattaatcaagttgcatgtgttggtctaagatgtaagatgttgttccaaa 22196201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 27573089 - 27573132
Alignment:
Q  196 gtctaagttgtaagttgtcgttccaaagtattggattcttaagt 239  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||    
T  27573089 gtctaagttgtgagttgtcgttccaaagtattggagtcttaagt 27573132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 238
Target Start/End: Original strand, 27573197 - 27573239
Alignment:
Q  196 gtctaagttgtaagttgtcgttccaaagtattggattcttaag 238  Q
    |||||||||||||||| |||||||||||||||||| |||||||    
T  27573197 gtctaagttgtaagttttcgttccaaagtattggagtcttaag 27573239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 252
Target Start/End: Complemental strand, 18927794 - 18927742
Alignment:
Q  200 aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    ||||||||||||||| ||||||||||||||| |||||||| ||| ||| ||||    
T  18927794 aagttgtaagttgtctttccaaagtattggagtcttaagttgttaatgttgtc 18927742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 252
Target Start/End: Original strand, 27573143 - 27573199
Alignment:
Q  196 gtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    ||||||||||| || ||||||||||||||||| || |||||||| ||||||| ||||    
T  27573143 gtctaagttgtgagctgtcgttccaaagtatttgagtcttaagttgttgatgttgtc 27573199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 2201120 - 2201081
Alignment:
Q  200 aagttgtaagttgtcgttccaaagtattggattcttaagt 239  Q
    ||||||||||||||| ||||||||||||||| ||||||||    
T  2201120 aagttgtaagttgtctttccaaagtattggagtcttaagt 2201081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 17105776 - 17105737
Alignment:
Q  200 aagttgtaagttgtcgttccaaagtattggattcttaagt 239  Q
    ||||||||||||||| ||||||||||||||| ||||||||    
T  17105776 aagttgtaagttgtctttccaaagtattggagtcttaagt 17105737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 23538798 - 23538745
Alignment:
Q  130 tatgttgtgaattgcttatgtgctgttttctgttactgttgaatattaatcaagttg 186  Q
    |||||||||||||||||  ||||||||| ||||| |||||||||||| |||||||||    
T  23538798 tatgttgtgaattgctt--gtgctgttt-ctgttgctgttgaatattgatcaagttg 23538745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 20182751 - 20182715
Alignment:
Q  200 aagttgtaagttgtcgttccaaagtattggattctta 236  Q
    ||||||| ||||||||||||||||||||||| |||||    
T  20182751 aagttgttagttgtcgttccaaagtattggagtctta 20182715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 22153240 - 22153276
Alignment:
Q  200 aagttgtaagttgtcgttccaaagtattggattctta 236  Q
    ||||||| ||||||||||||||||||||||| |||||    
T  22153240 aagttgttagttgtcgttccaaagtattggagtctta 22153276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 232
Target Start/End: Complemental strand, 22805768 - 22805732
Alignment:
Q  196 gtctaagttgtaagttgtcgttccaaagtattggatt 232  Q
    |||||||||||||||||| |||||||| |||||||||    
T  22805768 gtctaagttgtaagttgttgttccaaattattggatt 22805732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 247
Target Start/End: Complemental strand, 23838200 - 23838149
Alignment:
Q  195 ggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatg 247  Q
    |||||||| |||||| |||||| ||||||||||||| |||||||| |||||||    
T  23838200 ggtctaagatgtaagatgtcgt-ccaaagtattggagtcttaagttgttgatg 23838149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 58 - 208
Target Start/End: Complemental strand, 895 - 748
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| |||||||||||| ||| |||||||| |||||||||||||||  ||||  ||||||||||||||||||||||  ||||||| ||    
T  895 tgtgaaatatttatatgccttatgtggaagatgtatgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgct--tgtgctg-tt 799  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaa 208  Q
    |||||| |||||||||||| ||||||||||| |||||||||||||||||||    
T  798 tctgttgctgttgaatattgatcaagttgcaggtgttggtctaagttgtaa 748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 87; Significance: 9e-42; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 58 - 252
Target Start/End: Complemental strand, 48520554 - 48520355
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| |||||||||||||||| || ||||| ||||||||||||||| |||||  ||||| ||||||||||||||||  ||||||| ||    
T  48520554 tgtgaaatatttatatgccttatgtggaaaatgtataatgtttaagttgttgatgcttctcattaatattgatatgttgtgaattgct--tgtgctg-tt 48520458  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtct--------aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgat 249  Q
    ||| || | |||||||||| ||||||||||| ||||||||||        |||||| |||||||||||||||||||||||| |||||||| ||||||| |    
T  48520457 tctattgccgttgaatattgatcaagttgcaggtgttggtctaaattgtaaagttgcaagttgtcgttccaaagtattggagtcttaagttgttgatgtt 48520358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 58 - 252
Target Start/End: Original strand, 29764358 - 29764558
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    ||||||||| |||||| |||||||||||||||| |||||||| |||||||||||| ||   |||  ||||||||||||||||||||||  |||| || ||    
T  29764358 tgtgaaataattatatgccttatgtggaaaatgtatgatgtttaagttgttgatgttttcaattaatattgttatgttgtgaattgct--tgtgttg-tt 29764454  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttg---------gtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatga 248  Q
    |||||| |||||||||||| |||||||||||  |||||         ||||||||||||||||||||||||||||||||||| |||||||| |||||||     
T  29764455 tctgttgctgttgaatattgatcaagttgcagatgttggtttaagttgtctaagttgtaagttgtcgttccaaagtattggagtcttaagttgttgatgt 29764554  T
Q  249 tgtc 252  Q
    ||||    
T  29764555 tgtc 29764558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 58 - 252
Target Start/End: Complemental strand, 50000805 - 50000606
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    ||||||||| |||||| ||||||||| |||||| |||||||| |||||||||||| || |||||  ||||||||||||||||||||||  ||||||  ||    
T  50000805 tgtgaaataattatatgccttatgtgaaaaatgtatgatgtttaagttgttgatgattttcattaatattgttatgttgtgaattgct--tgtgct-att 50000709  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtct--------aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgat 249  Q
    |||||| |||||| ||||| ||||||||||| ||||||||||        ||||||||||||||| ||||||||||||||| |||||||| ||| ||| |    
T  50000708 tctgttgctgttgcatattgatcaagttgcaggtgttggtctaagtggtaaagttgtaagttgtctttccaaagtattggagtcttaagttgttaatgtt 50000609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 58 - 206
Target Start/End: Original strand, 46198445 - 46198590
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    ||||||||| |||||| |||||||||||||||| |||||||| |||||||||| |||| |||||  ||||||||||||||||||||||  |||| || ||    
T  46198445 tgtgaaataattatatgccttatgtggaaaatgtatgatgtttaagttgttgaggcttttcattaatattgttatgttgtgaattgct--tgtgttg-tt 46198541  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgt 206  Q
    |||||| |||||| ||||| ||||||||||| |||||||||||||||||    
T  46198542 tctgttgctgttgcatattgatcaagttgcaggtgttggtctaagttgt 46198590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 58 - 208
Target Start/End: Complemental strand, 51326835 - 51326688
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||| ||||||| |||||||||||||||| |||||||| ||||||||||||||| |||||  ||||||||||||||||||||||  ||| ||| ||    
T  51326835 tgtgaaatgtttatatgccttatgtggaaaatgtatgatgtttaagttgttgatgcttttcattaatattgttatgttgtgaattgct--tgtactg-tt 51326739  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaa 208  Q
    |||||| |||||| ||||| |||||| |||| |||||||| ||||||||||    
T  51326738 tctgttgctgttgcatattgatcaagatgcaggtgttggtataagttgtaa 51326688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 58 - 252
Target Start/End: Complemental strand, 12271597 - 12271398
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||| || |||| |||||||||||||||| |||||||| ||||||||||| ||| |||||  | |||||||| |||||||||||  ||| ||| ||    
T  12271597 tgtgaaatgttcatatgccttatgtggaaaatgtatgatgtttaagttgttgatacttttcattaattttgttatgctgtgaattgct--tgtactg-tt 12271501  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtct--------aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgat 249  Q
    |||||| |||||| ||||| ||||||||||| ||||||||||        ||||||||||||||| ||||||||||||||| |||||||| ||| ||| |    
T  12271500 tctgttgctgttgcatattgatcaagttgcaggtgttggtctaagttgtaaagttgtaagttgtctttccaaagtattggaatcttaagttgttaatgtt 12271401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 58 - 206
Target Start/End: Complemental strand, 48603495 - 48603350
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| |||||||||||| ||| |||||||| |||||||||||||||  ||||  |||||||||| ||  |||||||  ||||||| ||    
T  48603495 tgtgaaatatttatatgccttatgtggaagatgtatgatgtttaagttgttgatgcttcacattaatattgttatgatggaaattgct--tgtgctg-tt 48603399  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgt 206  Q
    |||||| || ||||||||| ||||||||||| |||||||||||||||||    
T  48603398 tctgttgctattgaatattgatcaagttgcaggtgttggtctaagttgt 48603350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 58 - 204
Target Start/End: Original strand, 27653300 - 27653443
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| |||||||| ||||||  |||||||| ||||||||||||||| |||||  ||||||||||||||||||||  | ||| ||| ||    
T  27653300 tgtgaaatatttatatgccttatgtagaaaatatatgatgtttaagttgttgatgcttttcattaatattgttatgttgtgaattg--tttgtactg-tt 27653396  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagtt 204  Q
    ||||||  ||||| ||||| |||||| ||||  ||||||||||||||    
T  27653397 tctgttgttgttgcatattgatcaagatgcagatgttggtctaagtt 27653443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 33797564 - 33797476
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    |||||||||||||||| |||||||||||||||| |||||||| ||||||||||| |||  ||||  |||||||||||||||||||||||    
T  33797564 tgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttgatacttcacattaatattgttatgttgtgaattgctt 33797476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 58 - 140
Target Start/End: Original strand, 13881459 - 13881541
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaa 140  Q
    |||||||||||||||| |||||||||||||||| |||||||| ||||||||| ||||| |||||  |||||||||||||||||    
T  13881459 tgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttggtgcttttcattaatattgttatgttgtgaa 13881541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 58 - 208
Target Start/End: Original strand, 22130984 - 22131120
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttg-aagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgtt 156  Q
    |||||||||||||||| |||||||||||||||| ||||||||  ||||||||||||||| ||||            ||||||||||||||  ||||||||    
T  22130984 tgtgaaatatttatatgccttatgtggaaaatgtatgatgttttaagttgttgatgcttctcat------------gttgtgaattgctt--gtgctgtt 22131069  T
Q  157 ttctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaa 208  Q
    | ||||| |||||||||||| || |||||||| |||||||||||||||||||    
T  22131070 t-ctgttgctgttgaatattgattaagttgcaggtgttggtctaagttgtaa 22131120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Complemental strand, 1010670 - 1010584
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  1010670 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 1010584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 16375618 - 16375704
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  16375618 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 16375704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Complemental strand, 21407302 - 21407216
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  21407302 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 21407216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 23967745 - 23967681
Alignment:
Q  190 gtgttggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| || |||| ||||||    
T  23967745 gtgttggtctaagttgtaagttgtcgttccaaagtattggagtcttaagttgtcgatgttgtcca 23967681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 1925288 - 1925376
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    ||||||||||||||||  ||||||||||| ||| |||||||| ||||||||||| |||   |||  |||||||||||||||||||||||    
T  1925288 tgtgaaatatttatatgacttatgtggaagatgtatgatgtttaagttgttgatacttcatattaatattgttatgttgtgaattgctt 1925376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 20924302 - 20924390
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    ||||||||||||||||  ||||||||||| ||| |||||||| ||||||||||| |||   |||  |||||||||||||||||||||||    
T  20924302 tgtgaaatatttatatgacttatgtggaagatgtatgatgtttaagttgttgatacttcatattaatattgttatgttgtgaattgctt 20924390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 254
Target Start/End: Complemental strand, 14800578 - 14800496
Alignment:
Q  172 atattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
    ||||| || ||| |||| |||| |||||||| |||||| |||||||||||||||||||| |||||||| ||||||| ||||||    
T  14800578 atattgattaagctgcatgtgtcggtctaagatgtaagatgtcgttccaaagtattggagtcttaagttgttgatgttgtcca 14800496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 254
Target Start/End: Complemental strand, 14809452 - 14809370
Alignment:
Q  172 atattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
    ||||| || ||| |||| |||| |||||||| |||||| |||||||||||||||||||| |||||||| ||||||| ||||||    
T  14809452 atattgattaagctgcatgtgtcggtctaagatgtaagatgtcgttccaaagtattggagtcttaagttgttgatgttgtcca 14809370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 144
Target Start/End: Complemental strand, 52639488 - 52639402
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||  |||||||||||| |||  ||||||  |||||||||||||||  ||||  |||||||||||||||||||||    
T  52639488 tgtgaaatatttatacgccttatgtggaagatgtttgatgtctaagttgttgatgcttcacattaatattgttatgttgtgaattgc 52639402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 20228968 - 20229056
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    |||||||||||||||| |||||||||||| |||  ||||||| ||||||||||| |||   | |  |||||||||||||||||||||||    
T  20228968 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatacttcataataatattgttatgttgtgaattgctt 20229056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 118 - 230
Target Start/End: Complemental strand, 20316619 - 20316502
Alignment:
Q  118 cattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatattaatcaagttgcaagtgttggtct--------aagttgtaag 209  Q
    ||||| |||||  ||||||||||||||||  ||||||||| ||||| |||||||||||| |||||||| || ||||||||||        ||||||||||    
T  20316619 cattgatattgacatgttgtgaattgctt--gtgctgttt-ctgttgctgttgaatattgatcaagtttcaggtgttggtctaaattgtaaagttgtaag 20316523  T
Q  210 ttgtcgttccaaagtattgga 230  Q
    || ||||||||||||||||||    
T  20316522 ttatcgttccaaagtattgga 20316502  T

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Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 254
Target Start/End: Original strand, 21043347 - 21043435
Alignment:
Q  166 tgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
    ||||| |||||||| ||| |||| |||| | | |||| |||||| |||||||||||||||||||| |||||||| ||||||| ||||||    
T  21043347 tgttgtatattaattaagctgcatgtgtcgttttaagatgtaagatgtcgttccaaagtattggagtcttaagttgttgatgttgtcca 21043435  T

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Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 20958134 - 20958075
Alignment:
Q  195 ggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
    ||||||||||||||| | |||||||||||||||||| |||||||| ||||||| ||||||    
T  20958134 ggtctaagttgtaagatttcgttccaaagtattggagtcttaagttgttgatgttgtcca 20958075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 247
Target Start/End: Complemental strand, 28312550 - 28312488
Alignment:
Q  185 tgcaagtgttggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatg 247  Q
    |||| |||| |||||||| |||||| |||||||||||||||||||| |||||||| |||||||    
T  28312550 tgcatgtgtcggtctaagatgtaagatgtcgttccaaagtattggagtcttaagttgttgatg 28312488  T

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Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 254
Target Start/End: Complemental strand, 48520357 - 48520299
Alignment:
Q  196 gtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
    ||||||||||||||||| ||||||||||||||||| |||||||| || |||| ||||||    
T  48520357 gtctaagttgtaagttgccgttccaaagtattggagtcttaagttgtcgatgttgtcca 48520299  T

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Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 254
Target Start/End: Complemental strand, 20316480 - 20316422
Alignment:
Q  196 gtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
    ||||||||||| |||||||||||||||||||| || |||||||| || |||| ||||||    
T  20316480 gtctaagttgtgagttgtcgttccaaagtattagagtcttaagttgtcgatgttgtcca 20316422  T

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Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 252
Target Start/End: Original strand, 11809472 - 11809528
Alignment:
Q  196 gtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    ||||||||||||||||||  ||||||||||||||| |||||||| ||| ||| ||||    
T  11809472 gtctaagttgtaagttgtatttccaaagtattggagtcttaagttgttaatgttgtc 11809528  T

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Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 252
Target Start/End: Complemental strand, 23073062 - 23073006
Alignment:
Q  196 gtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    ||||||||||||| || ||||||||||||||||||  ||||||| ||||||| ||||    
T  23073062 gtctaagttgtaatttatcgttccaaagtattggagacttaagttgttgatgttgtc 23073006  T

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Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 252
Target Start/End: Original strand, 25263068 - 25263120
Alignment:
Q  200 aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    ||||||||||||||| ||||||||||||||| |||||||| ||| ||| ||||    
T  25263068 aagttgtaagttgtctttccaaagtattggagtcttaagttgtttatgttgtc 25263120  T

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Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 636042 - 636090
Alignment:
Q  160 tgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaa 208  Q
    |||| |||||| ||||| ||||||||| | |||||||||||||||||||    
T  636042 tgttgctgttgtatattgatcaagttgtacgtgttggtctaagttgtaa 636090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 252
Target Start/End: Original strand, 10492024 - 10492076
Alignment:
Q  200 aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    ||||||||||||||| ||||||||||||||| || ||||| ||| ||| ||||    
T  10492024 aagttgtaagttgtctttccaaagtattggaatcgtaagttgttaatgttgtc 10492076  T

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Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 109
Target Start/End: Original strand, 41781666 - 41781718
Alignment:
Q  58 tgtgaaatatttatattccttatgtgg-aaaatgaatgatgttgaagttgttg 109  Q
    |||||||||||||||| |||||||||| |||||| | |||||| |||||||||    
T  41781666 tgtgaaatatttatatgccttatgtggaaaaatgtacgatgtttaagttgttg 41781718  T

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Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 247
Target Start/End: Complemental strand, 47190627 - 47190575
Alignment:
Q  195 ggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatg 247  Q
    |||||||| || ||| ||| |||||||||||||||| |||||||| |||||||    
T  47190627 ggtctaagatgaaagatgttgttccaaagtattggagtcttaagttgttgatg 47190575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 227
Target Start/End: Complemental strand, 48603349 - 48603321
Alignment:
Q  199 taagttgtaagttgtcgttccaaagtatt 227  Q
    |||||||||||||||||||||||||||||    
T  48603349 taagttgtaagttgtcgttccaaagtatt 48603321  T

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Target: scaffold0020 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 58 - 239
Target Start/End: Original strand, 169827 - 170013
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||  |||||  ||||||||||||||||||||||  ||| ||| ||    
T  169827 tgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttgatgctcttcattaatattgttatgttgtgaattgct--tgtactg-tt 169923  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtct--------aagttgtaagttgtcgttccaaagtattggattcttaagt 239  Q
    ||||||||||||  ||||| ||||||||||| ||||||||||        ||||||||||||||| ||||||||||||||| ||||||||    
T  169924 tctgttactgttacatattgatcaagttgcaggtgttggtctaagttgtaaagttgtaagttgtctttccaaagtattggagtcttaagt 170013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 6e-40; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 58 - 208
Target Start/End: Complemental strand, 14258493 - 14258346
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| |||||||||||||||| ||||||||  |||||||||||||| |||||  ||||||||||||||||||||||  |||  || ||    
T  14258493 tgtgaaatatttatatgccttatgtggaaaatgtatgatgtttgagttgttgatgcttctcattaatattgttatgttgtgaattgct--tgtaatg-tt 14258397  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaa 208  Q
    |||||| |||||||||||| ||||||||||| |||||||||||||||||||    
T  14258396 tctgttgctgttgaatattgatcaagttgcaggtgttggtctaagttgtaa 14258346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 58 - 208
Target Start/End: Complemental strand, 15720038 - 15719891
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| ||||||||| |||||| |||||||| ||||||||||||||| |||||  ||||||||||||||||||||||  ||| ||| ||    
T  15720038 tgtgaaatatttatatgccttatgtgaaaaatgtatgatgtttaagttgttgatgcttttcattaatattgttatgttgtgaattgct--tgtactg-tt 15719942  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaa 208  Q
    |||||| ||| |||||||| ||||||||||| |||||||||||||||||||    
T  15719941 tctgttgctgatgaatattgatcaagttgcaggtgttggtctaagttgtaa 15719891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 58 - 208
Target Start/End: Original strand, 16460843 - 16460990
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||| ||||   ||||||||||||||||||||||| |||  || ||    
T  16460843 tgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttgatgcttctcatcaatattgttatgttgtgaattgcttttgt--tg-tt 16460939  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaa 208  Q
    |||||| |||||||||||| ||||||||||| ||||| |||||||||||||    
T  16460940 tctgttgctgttgaatattgatcaagttgcaggtgtttgtctaagttgtaa 16460990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 58 - 252
Target Start/End: Complemental strand, 32301330 - 32301131
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||  |||||||||||||||| |||||||| || |||||||| ||| |||||  ||||||||||||||||||||||  |||| || ||    
T  32301330 tgtgaaatatttatacgccttatgtggaaaatgtatgatgtttaaattgttgatacttttcattaatattgttatgttgtgaattgct--tgtgttg-tt 32301234  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgt--------aagttgtcgttccaaagtattggattcttaagtggttgatgat 249  Q
    |||||| |||||||||||| ||||||||||| ||| |||||||||||||        |||||||||||||||||||||||| |||||||| || |||| |    
T  32301233 tctgttgctgttgaatattgatcaagttgcaggtggtggtctaagttgtaaagttgcaagttgtcgttccaaagtattggagtcttaagttgtcgatgtt 32301134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 58 - 252
Target Start/End: Original strand, 46580753 - 46580952
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||  |||||  |||||||||| |||||||||||  ||| ||||||    
T  46580753 tgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttgatgctcttcattaatattgttatgctgtgaattgct--tgtactgttt 46580850  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtct--------aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgat 249  Q
    | |||| |||||| ||||| ||||||||||| ||||||||||        ||||||||||||||| ||||||||||||||| |||||||| ||| ||| |    
T  46580851 t-tgttgctgttgcatattgatcaagttgcaggtgttggtctaagttgtaaagttgtaagttgtctttccaaagtattggagtcttaagttgttaatgtt 46580949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 58 - 208
Target Start/End: Complemental strand, 16579801 - 16579654
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||  ||||||||| |||||| || ||||| ||||||||||||||| |||||  ||||||||||||||||||||||  ||||||| ||    
T  16579801 tgtgaaatatttatacgccttatgtgtaaaatgtattatgtttaagttgttgatgcttctcattaatattgttatgttgtgaattgct--tgtgctg-tt 16579705  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaa 208  Q
    ||| || |||||||||||| ||||||||||| |||||||||||||||||||    
T  16579704 tctattgctgttgaatattgatcaagttgcaggtgttggtctaagttgtaa 16579654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 58 - 208
Target Start/End: Original strand, 16585862 - 16586009
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||  ||||||||| |||||| || ||||| ||||||||||||||| |||||  ||||||||||||||||||||||  ||||||| ||    
T  16585862 tgtgaaatatttatacgccttatgtgtaaaatgtattatgtttaagttgttgatgcttctcattaatattgttatgttgtgaattgct--tgtgctg-tt 16585958  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaa 208  Q
    ||| || |||||||||||| ||||||||||| |||||||||||||||||||    
T  16585959 tctattgctgttgaatattgatcaagttgcaggtgttggtctaagttgtaa 16586009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 58 - 239
Target Start/End: Complemental strand, 8940292 - 8940106
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| | |||||||||||||| |||||||| ||||||||||||||  |||||  ||||||||||||||||||||||  ||| ||| ||    
T  8940292 tgtgaaatatttatatgcgttatgtggaaaatgtatgatgtttaagttgttgatgctcttcattaatattgttatgttgtgaattgct--tgtactg-tt 8940196  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtct--------aagttgtaagttgtcgttccaaagtattggattcttaagt 239  Q
    | |||| |||||| ||||| ||||||||||| ||||||||||        ||||||||||||||| ||||||||||||||| ||||||||    
T  8940195 tatgttgctgttgcatattgatcaagttgcaggtgttggtctaagttgtaaagttgtaagttgtctttccaaagtattggagtcttaagt 8940106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 58 - 208
Target Start/End: Complemental strand, 16998635 - 16998488
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| |||||||| ||||||  |||||||| ||||||||||||||| |||||  ||||||||||||||||||||||  |||  || ||    
T  16998635 tgtgaaatatttatatgccttatgttgaaaatatatgatgtttaagttgttgatgcttttcattaatattgttatgttgtgaattgct--tgtaatg-tt 16998539  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaa 208  Q
    |||||| |||||| ||||| ||||||||||| |||||||||||||||||||    
T  16998538 tctgttgctgttgcatattgatcaagttgcaggtgttggtctaagttgtaa 16998488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 58 - 252
Target Start/End: Complemental strand, 15112986 - 15112787
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||| || |||| |||||||| ||||||| |||||||| ||||||||||||||| |||||  ||||||||||||||||||| ||  ||| ||| ||    
T  15112986 tgtgaaatgttcatatgccttatgtagaaaatgtatgatgtttaagttgttgatgcttttcattaatattgttatgttgtgaatttct--tgtactg-tt 15112890  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtct--------aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgat 249  Q
    |||||| |||||| | ||| ||||||||||| ||||||||||        ||||||||||||||| ||||||||||||||| |||||||| ||| ||| |    
T  15112889 tctgttgctgttgcacattgatcaagttgcaggtgttggtctaagttgtaaagttgtaagttgtctttccaaagtattggaatcttaagttgttaatgtt 15112790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 68 - 252
Target Start/End: Complemental strand, 16324084 - 16323895
Alignment:
Q  68 ttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttttctgttactg 167  Q
    |||||| |||| ||||||||||| |||||||| ||||||||||||||  |||||  ||||||||||||||||||||||  ||| ||| |||||||| |||    
T  16324084 ttatatgccttttgtggaaaatgcatgatgtttaagttgttgatgctcttcattaatattgttatgttgtgaattgct--tgtactg-tttctgttgctg 16323988  T
Q  168 ttgaatattaatcaagttgcaagtgttggtctaagttgta--------agttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    ||| ||||| ||||||||||  ||||||||||||||||||        ||||||| ||||||||||||||| |||||||| ||| ||| ||||    
T  16323987 ttgcatattgatcaagttgcgggtgttggtctaagttgtaaagttgttagttgtctttccaaagtattggaatcttaagttgttaatgttgtc 16323895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 58 - 252
Target Start/End: Original strand, 16550724 - 16550924
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    ||||||||| |||||| |||||||||||||| | |||||||| ||||||||||||||| |||||  |||||||||||| |||||||||| |||  |||||    
T  16550724 tgtgaaataattatatgccttatgtggaaaacgtatgatgtttaagttgttgatgcttttcattaatattgttatgttttgaattgcttgtgt--tgttt 16550821  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttg---------gtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatga 248  Q
     || ||  ||||||||| | |||||||||||  |||||         ||||||||||||||||||| ||||||||||||||| |||||||  |||||||     
T  16550822 -ctattgatgttgaataatgatcaagttgcagatgttggtttaagttgtctaagttgtaagttgtcattccaaagtattggagtcttaaggtgttgatgt 16550920  T
Q  249 tgtc 252  Q
    ||||    
T  16550921 tgtc 16550924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 58 - 208
Target Start/End: Complemental strand, 8468760 - 8468613
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||| || |||| ||||||||||| |||  |||||||| ||||||||||||||| |||||  ||||||||||||||||||||||  |||  || ||    
T  8468760 tgtgaaatgttcatatgccttatgtggagaatatatgatgtttaagttgttgatgcttttcattaatattgttatgttgtgaattgct--tgtattg-tt 8468664  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaa 208  Q
    |||||| |||||| ||||| |||||| |||| |||||||||||||||||||    
T  8468663 tctgttgctgttgcatattgatcaagatgcaggtgttggtctaagttgtaa 8468613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 70 - 239
Target Start/End: Complemental strand, 15116511 - 15116340
Alignment:
Q  70 atattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgtt 169  Q
    |||| |||||||||||||||| |||||||| | |||||||||| || |||||  ||||||||| ||||||||| ||  |||  || |||||||| |||||    
T  15116511 atatgccttatgtggaaaatgtatgatgtttacgttgttgatgtttttcattaatattgttattttgtgaatttct--tgtattg-tttctgttgctgtt 15116415  T
Q  170 gaatattaatcaagttgcaagtgttggtct-----aagttgtaagttgtcgttccaaagtattggattcttaagt 239  Q
    | | ||| ||||||||||||||||||||||     ||||||||||||||| ||||||||||||||| ||||||||    
T  15116414 gcacattgatcaagttgcaagtgttggtctttgtaaagttgtaagttgtctttccaaagtattggaatcttaagt 15116340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 58 - 208
Target Start/End: Original strand, 32160922 - 32161068
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    ||||||||| |||||| ||||||||||||  || |||||||| |||||||||||| || |||||  ||||||||||||||||||||||  ||||||| ||    
T  32160922 tgtgaaataattatatgccttatgtggaat-tgtatgatgtttaagttgttgatgtttttcattaatattgttatgttgtgaattgct--tgtgctg-tt 32161017  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaa 208  Q
    |||||| |||||| ||||| || ||||| || |||||||||||||||||||    
T  32161018 tctgttgctgttgcatattgattaagttacaggtgttggtctaagttgtaa 32161068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 58 - 206
Target Start/End: Original strand, 17060502 - 17060646
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||  | ||| | | ||||||||||||  ||| ||| ||    
T  17060502 tgtgaaatatttatattccttatgtggaaaatgtatgatgtttaagttgttgatgcttttcattaatgttggtct-ttgtgaattgct--tgtactg-tt 17060597  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgt 206  Q
    ||| || |||||||||||| ||||| || ||||||||||||||| ||||    
T  17060598 tctattgctgttgaatattgatcaaattacaagtgttggtctaaattgt 17060646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 86 - 252
Target Start/End: Original strand, 14981541 - 14981712
Alignment:
Q  86 aaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatattaatcaagtt 185  Q
    ||||| |||||| | ||||||||||||||  |||||  |||||||||||||||||||||||  || |||||| ||||| |||||| ||||| ||||||||    
T  14981541 aaatgtatgatgcttaagttgttgatgctcttcattaatattgttatgttgtgaattgctt--gtactgttt-ctgttgctgttgcatattgatcaagtt 14981637  T
Q  186 gcaagtgttggtct--------aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    ||| ||||||||||        ||||||||||||||| ||||||||||||||| |||||||| ||| ||| ||||    
T  14981638 gcaggtgttggtctaagttgtaaagttgtaagttgtctttccaaagtattggagtcttaagttgttaatgttgtc 14981712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 1858909 - 1858997
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    |||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||  ||||  ||||| |||||||||||||||||    
T  1858909 tgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttgatgcttcacattaatattgatatgttgtgaattgctt 1858997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 13918603 - 13918691
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    |||||||||||||||| |||||| ||||||||| |||||||| |||||||||||||||  ||||  |||||||||||||||||||||||    
T  13918603 tgtgaaatatttatatgccttatatggaaaatgtatgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgctt 13918691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 58 - 208
Target Start/End: Complemental strand, 14273557 - 14273410
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| |||||||||||||||| |||||||| ||||||||| || || |||||  ||||||||||||| ||||   || ||| ||  ||    
T  14273557 tgtgaaatatttatataccttatgtggaaaatgtatgatgtttaagttgttggtgtttttcattaatattgttatgttgcgaat--attttgtact-att 14273461  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaa 208  Q
    |||||| || ||| ||||| ||||||||||| ||||| |||||||||||||    
T  14273460 tctgttgctattgcatattgatcaagttgcaggtgtttgtctaagttgtaa 14273410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 86 - 208
Target Start/End: Original strand, 15411017 - 15411136
Alignment:
Q  86 aaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatattaatcaagtt 185  Q
    ||||| |||||| | ||||||||||||||  |||||  |||||||||||||||||||||||  || |||||| ||||| |||||| ||||| ||||||||    
T  15411017 aaatgtatgatgcttaagttgttgatgctcttcattaatattgttatgttgtgaattgctt--gtactgttt-ctgttgctgttgtatattgatcaagtt 15411113  T
Q  186 gcaagtgttggtctaagttgtaa 208  Q
    ||| |||||||||||||||||||    
T  15411114 gcaggtgttggtctaagttgtaa 15411136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 2530214 - 2530301
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    ||||||||||| |||| |||||||||||||||| |||||||| |||||||||||||||  ||||  |||||||||||||||||||||||    
T  2530214 tgtgaaatatt-atatgccttatgtggaaaatgtatgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgctt 2530301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 16614938 - 16614850
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    ||||||||| |||||| |||||||||||||| | |||||||| ||||||||||||||| |||||  |||||||||||| ||||||||||    
T  16614938 tgtgaaataattatatgccttatgtggaaaacgtatgatgtttaagttgttgatgcttttcattaatattgttatgttttgaattgctt 16614850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 25927326 - 25927414
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    ||||||||||||||||  ||||||||||| ||| |||||||| |||||||||||||||  ||||  |||||||||||||||||||||||    
T  25927326 tgtgaaatatttatatgtcttatgtggaagatgtatgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgctt 25927414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 58 - 208
Target Start/End: Complemental strand, 17232961 - 17232814
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||| || |||| ||||||||||| |||  |||||||| |||||||||||| || |||||  |||||| ||||| | ||||||||  || ||||||    
T  17232961 tgtgaaatgttcatatgccttatgtggagaatatatgatgtttaagttgttgatgtttttcattaatattgtcatgttataaattgctt--gtactgttt 17232864  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaa 208  Q
     ||||| |||||| ||||| |||||| |||| |||||||||||||||||||    
T  17232863 -ctgttgctgttgcatattgatcaagatgcaggtgttggtctaagttgtaa 17232814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Complemental strand, 33054 - 32968
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  33054 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 32968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 12704818 - 12704904
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  12704818 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 12704904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Complemental strand, 12714811 - 12714725
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  12714811 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 12714725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Complemental strand, 12718615 - 12718529
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  12718615 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 12718529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Complemental strand, 16114188 - 16114102
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  16114188 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 16114102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Complemental strand, 16117341 - 16117255
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  16117341 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 16117255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 16907360 - 16907446
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  16907360 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 16907446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Complemental strand, 18283313 - 18283227
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  18283313 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 18283227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Complemental strand, 26292342 - 26292256
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  26292342 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 26292256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 77 - 208
Target Start/End: Original strand, 1490151 - 1490279
Alignment:
Q  77 ttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatatt 176  Q
    |||||||||| ||  |||||||||| ||||| | || ||||| ||  |||||||||| ||||||||||||  || || |||||||||  |||||||||||    
T  1490151 ttatgtggaatatatatgatgttgatgttgtggttgtttatcgttaatattgttatgatgtgaattgctt--gtact-ttttctgttgttgttgaatatt 1490247  T
Q  177 aatcaagttgcaagtgttggtctaagttgtaa 208  Q
     ||||||||||| |||||||||||||||||||    
T  1490248 gatcaagttgcaggtgttggtctaagttgtaa 1490279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 252
Target Start/End: Original strand, 14157164 - 14157256
Alignment:
Q  160 tgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    |||| |||||| ||||| |||||||| || ||||||||||||||||||||||||| || |||||||||||| |||||||| ||| ||| ||||    
T  14157164 tgttgctgttgcatattgatcaagttccaggtgttggtctaagttgtaagttgtctttgcaaagtattggaatcttaagttgttaatgttgtc 14157256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 58 - 144
Target Start/End: Complemental strand, 12723526 - 12723440
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| ||| |||||||||||  ||||  |||||||||||||||||||||    
T  12723526 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagctgttgatgcttcacattaatattgttatgttgtgaattgc 12723440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 58 - 144
Target Start/End: Complemental strand, 18279350 - 18279264
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||| ||||||||    
T  18279350 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttttgaattgc 18279264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 196 - 254
Target Start/End: Complemental strand, 32301133 - 32301075
Alignment:
Q  196 gtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||    
T  32301133 gtctaagttgtaagttgtcgttccaaagtattggagtcttaagttgttgatgttgtcca 32301075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 58 - 143
Target Start/End: Original strand, 70924 - 71009
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattg 143  Q
    |||||||||||||||| |||||||||||| |||  ||||||| ||||||| |||||||  ||||  ||||||||||||||||||||    
T  70924 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgtcgatgcttcacattaatattgttatgttgtgaattg 71009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 58 - 143
Target Start/End: Original strand, 75033 - 75118
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattg 143  Q
    |||||||||||||||| |||||||||||| |||  ||||||| ||||||| |||||||  ||||  ||||||||||||||||||||    
T  75033 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgtcgatgcttcacattaatattgttatgttgtgaattg 75118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 254
Target Start/End: Complemental strand, 38519427 - 38519339
Alignment:
Q  166 tgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
    ||||| |||||||| ||| |||| |||| ||||| || |||||| |||||||||||||||||||| |||||||| ||||||| ||||||    
T  38519427 tgttgtatattaattaagctgcatgtgtcggtctgagatgtaagatgtcgttccaaagtattggagtcttaagttgttgatgttgtcca 38519339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 247
Target Start/End: Complemental strand, 42462010 - 42461923
Alignment:
Q  160 tgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatg 247  Q
    |||| |||||| |||||||| ||| |||| |||| |||||||| |||||| ||||||||||| |||||||| |||||||| |||||||    
T  42462010 tgttgctgttgtatattaattaagatgcatgtgtcggtctaagatgtaagatgtcgttccaatgtattggagtcttaagttgttgatg 42461923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 228
Target Start/End: Original strand, 10501489 - 10501551
Alignment:
Q  166 tgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattg 228  Q
    ||||| ||||| ||||||||||| |||||||||| |||||||||||||| |||||||||||||    
T  10501489 tgttgcatattgatcaagttgcaggtgttggtctgagttgtaagttgtctttccaaagtattg 10501551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 61 - 146
Target Start/End: Complemental strand, 15084140 - 15084055
Alignment:
Q  61 gaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    |||||||||||||  ||||||||||| ||| |||||||| ||||||||||| |||   |||  |||||||||||||||||||||||    
T  15084140 gaaatatttatatgacttatgtggaagatgtatgatgtttaagttgttgatacttcatattaatattgttatgttgtgaattgctt 15084055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 58 - 143
Target Start/End: Original strand, 45170165 - 45170250
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattg 143  Q
    ||||||||||||||||  ||||||||||| ||| |||||||| ||||||||||| |||   |||  ||||||||||||||||||||    
T  45170165 tgtgaaatatttatatgacttatgtggaagatgtatgatgtttaagttgttgatactttatattaatattgttatgttgtgaattg 45170250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 254
Target Start/End: Original strand, 130883 - 130971
Alignment:
Q  166 tgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
    ||||| |||||||| |||||||| ||||  ||||||| |||||| |||||||||||||| ||||| || ||||| ||||||| ||||||    
T  130883 tgttgtatattaattaagttgcatgtgtcagtctaagatgtaagatgtcgttccaaagtgttggagtcctaagttgttgatgttgtcca 130971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 709296 - 709423
Alignment:
Q  77 ttatgtggaaaatgaatgatgttgaagttgttgatgcttat-cattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatat 175  Q
    |||||||||| ||| |||||||||||||||||  || |||| ||||    ||||||||||||||  || ||||||| ||  | |||||  ||||||||||    
T  709296 ttatgtggaatatgtatgatgttgaagttgttattgtttattcattaacgttgttatgttgtgagctgtttatgtgttgcct-ctgttgttgttgaatat 709394  T
Q  176 taatcaagttgcaagtgttggtctaagtt 204  Q
    |||| ||||||||||||||||||||||||    
T  709395 taattaagttgcaagtgttggtctaagtt 709423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 252
Target Start/End: Original strand, 11392103 - 11392159
Alignment:
Q  196 gtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    |||||||||||||||||||||||||||||||||||  ||||||| ||||||| ||||    
T  11392103 gtctaagttgtaagttgtcgttccaaagtattggagccttaagttgttgatgttgtc 11392159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 252
Target Start/End: Original strand, 16461050 - 16461106
Alignment:
Q  196 gtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    ||||||||||||||||||||||||||||||||||| |||||||| || |||| ||||    
T  16461050 gtctaagttgtaagttgtcgttccaaagtattggagtcttaagttgtcgatgttgtc 16461106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 16462347 - 16462220
Alignment:
Q  77 ttatgtggaaaatgaatgatgttgaagttgttgatgcttat-cattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatat 175  Q
    |||||||||| ||| |||||||||||| ||||  || |||| ||||    ||||||||||||||  || ||||||||||  | |||||  ||||||||||    
T  16462347 ttatgtggaatatgcatgatgttgaaggtgttattgtttattcattaacgttgttatgttgtgagatgtttatgtgctgcct-ctgttgttgttgaatat 16462249  T
Q  176 taatcaagttgcaagtgttggtctaagtt 204  Q
    |||| ||||||||||||||||||||||||    
T  16462248 taattaagttgcaagtgttggtctaagtt 16462220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 39722213 - 39722125
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    ||||||||| |||||| |||||||||||| ||| |||||||| ||||||||||| |||   | |  |||||||||||||||||||||||    
T  39722213 tgtgaaatacttatatgccttatgtggaagatgtatgatgtttaagttgttgatacttcataataatattgttatgttgtgaattgctt 39722125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 41055785 - 41055659
Alignment:
Q  77 ttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatatt 176  Q
    |||||||||| ||| |||||||||||||||||  || |  | |||    |||||||||||||| ||| ||||||| ||  | |||||  |||||||||||    
T  41055785 ttatgtggaatatgtatgatgttgaagttgttattgttatttattaacgttgttatgttgtgagttgtttatgtgatgcct-ctgttgttgttgaatatt 41055687  T
Q  177 aatcaagttgcaagtgttggtctaagtt 204  Q
    ||| ||||||||||||||||||||||||    
T  41055686 aattaagttgcaagtgttggtctaagtt 41055659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 239
Target Start/End: Original strand, 9033412 - 9033485
Alignment:
Q  166 tgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattggattcttaagt 239  Q
    ||||| |||||||| ||| |||| |||| |||||||| || ||| |||||||||||||||||||| ||||||||    
T  9033412 tgttgtatattaattaagctgcatgtgtcggtctaagatgaaagatgtcgttccaaagtattggagtcttaagt 9033485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 196 - 252
Target Start/End: Complemental strand, 16614794 - 16614738
Alignment:
Q  196 gtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    ||||||||||||||||||| ||||||||||||||| |||||||  ||||||| ||||    
T  16614794 gtctaagttgtaagttgtcattccaaagtattggagtcttaaggtgttgatgttgtc 16614738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 247
Target Start/End: Complemental strand, 14422011 - 14421924
Alignment:
Q  160 tgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatg 247  Q
    ||||||||||| | ||| || ||| |||| |||| ||| |||| |||||| ||||||||||||||||||||  ||||||| |||||||    
T  14422011 tgttactgttgtaaattgattaagctgcatgtgtcggtttaagatgtaagatgtcgttccaaagtattggagccttaagttgttgatg 14421924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 254
Target Start/End: Complemental strand, 16579594 - 16579536
Alignment:
Q  196 gtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
    ||||||||||||||||||||||||||||| | ||| |||||||| || |||| ||||||    
T  16579594 gtctaagttgtaagttgtcgttccaaagtttcggagtcttaagttgtcgatgttgtcca 16579536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 254
Target Start/End: Original strand, 16586069 - 16586127
Alignment:
Q  196 gtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
    ||||||||||||||||||||||||||||| | ||| |||||||| || |||| ||||||    
T  16586069 gtctaagttgtaagttgtcgttccaaagtttcggagtcttaagttgtcgatgttgtcca 16586127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 48812060 - 48812022
Alignment:
Q  166 tgttgaatattaatcaagttgcaagtgttggtctaagtt 204  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  48812060 tgttgaatattaattaagttgcaagtgttggtctaagtt 48812022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 252
Target Start/End: Complemental strand, 11085000 - 11084948
Alignment:
Q  200 aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    ||||||||||||||| ||||||||||||||| |||||||| ||| ||| ||||    
T  11085000 aagttgtaagttgtctttccaaagtattggagtcttaagttgttaatgttgtc 11084948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 247
Target Start/End: Complemental strand, 11661333 - 11661246
Alignment:
Q  160 tgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatg 247  Q
    |||| |||||| | ||| || ||| |||| |||| ||| |||| |||||| ||| |||||||||||||||| |||||||| |||||||    
T  11661333 tgttgctgttgtaaattgattaagctgcatgtgtcggtataagatgtaagatgttgttccaaagtattggagtcttaagttgttgatg 11661246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 20487584 - 20487533
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttg 109  Q
    ||||||||||||||||  ||||||||||||||| | |||||| |||||||||    
T  20487584 tgtgaaatatttatatggcttatgtggaaaatgtacgatgtttaagttgttg 20487533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 254
Target Start/End: Complemental strand, 16996258 - 16996189
Alignment:
Q  185 tgcaagtgttggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
    |||| |||| |||||||| || ||| |||||||||||||| ||||| || ||||| ||||||| ||||||    
T  16996258 tgcatgtgtcggtctaagatgcaagatgtcgttccaaagtgttggagtcctaagttgttgatgttgtcca 16996189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 58 - 252
Target Start/End: Original strand, 1370 - 1569
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| | |||||||||||||| |||||||| ||||||||||||||  |||||  ||||||||||||||||||||||  ||| ||||||    
T  1370 tgtgaaatatttatatgcgttatgtggaaaatgtatgatgttaaagttgttgatgctcttcattaatattgttatgttgtgaattgct--tgtactgttt 1467  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtct--------aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgat 249  Q
    | |||| |||||| ||||| ||||||||||| ||||||||||        ||||||||||||||| ||||||||||||||| |||||||| ||| ||| |    
T  1468 t-tgttgctgttgcatattgatcaagttgcaggtgttggtctaagttgtaaagttgtaagttgtctttccaaagtattggagtcttaagttgttaatgtt 1566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 58 - 252
Target Start/End: Original strand, 7019 - 7218
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||| ||||| |||||||||||||||| |||||||| ||||||||||||||| |||||  ||||||||||||||||||||  | ||| ||| ||    
T  7019 tgtgaaatatgtatatgccttatgtggaaaatgtatgatgtttaagttgttgatgcttttcattaatattgttatgttgtgaattg--tttgtactg-tt 7115  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtct--------aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgat 249  Q
    |||||| |||||| ||||| ||||||||||| ||||||||||        ||||||||||||||| ||||||||||||||| |||||||| ||| ||| |    
T  7116 tctgttgctgttgcatattgatcaagttgcaggtgttggtctaagttgtaaagttgtaagttgtctttccaaagtattggagtcttaagttgttaatgtt 7215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 83; Significance: 2e-39; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 58 - 207
Target Start/End: Complemental strand, 120051 - 119905
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| ||||||||| |||||| |||||||| ||||||||||||||| |||||  |||| |||||||||||||||||  ||||||| ||    
T  120051 tgtgaaatatttatatgccttatgtgaaaaatgtatgatgtttaagttgttgatgcttctcattaatattattatgttgtgaattgct--tgtgctg-tt 119955  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgta 207  Q
    |||||| |||||||||||| ||||||||||| ||||| ||||||||||||    
T  119954 tctgttgctgttgaatattgatcaagttgcaggtgtttgtctaagttgta 119905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 252
Target Start/End: Complemental strand, 117255 - 117200
Alignment:
Q  197 tctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    |||| ||||||||||||||||||||||||||||| |||||||| ||||||| ||||    
T  117255 tctatgttgtaagttgtcgttccaaagtattggagtcttaagttgttgatgttgtc 117200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 254
Target Start/End: Complemental strand, 117202 - 117144
Alignment:
Q  196 gtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
    ||||| |||||||||||| |||||||||||||||| |||||||| || |||| ||||||    
T  117202 gtctatgttgtaagttgtagttccaaagtattggagtcttaagttgtcgatgttgtcca 117144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 58 - 252
Target Start/End: Original strand, 53916 - 54115
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| | |||||||||||||| |||||||| ||||||||||||||  |||||  ||||||||||||||||||||||  ||| ||| ||    
T  53916 tgtgaaatatttatatgcgttatgtggaaaatgtatgatgtttaagttgttgatgctcttcattaatattgttatgttgtgaattgct--tgtactg-tt 54012  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtct--------aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgat 249  Q
    |||||| |||||| ||||| ||||||||||| ||||||||||        ||||||||||||||| ||||||||||||||| |||||||| ||| ||| |    
T  54013 tctgttgctgttgcatattgatcaagttgcaggtgttggtctaagttgtaaagttgtaagttgtctttccaaagtattggagtcttaagttgttaatgtt 54112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 58 - 252
Target Start/End: Complemental strand, 10552 - 10353
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    ||||||||| |||||| |||||||||||||||| |||||||| | ||| ||||||||| |||||  |||||||||||||||||||||||  ||||| |||    
T  10552 tgtgaaataattatatgccttatgtggaaaatgtatgatgttta-gtttttgatgcttttcattaatattgttatgttgtgaattgctt--gtgctattt 10456  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttg---------gtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatga 248  Q
     ||||| |||||||||||| |||||||||||  |||||         ||||||||||||||||||||||||||||||||||| |||||||| |||||||     
T  10455 -ctgttgctgttgaatattcatcaagttgcagatgttggtttaagttgtctaagttgtaagttgtcgttccaaagtattggagtcttaagttgttgatgt 10357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 58 - 208
Target Start/End: Original strand, 2791 - 2938
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| |||||||||||||||| |||||||| ||||||||| ||||| |||||  ||||||||||||||||||||||  ||| ||| ||    
T  2791 tgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttggtgcttttcattaatattgttatgttgtgaattgct--tgtactg-tt 2887  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaa 208  Q
    |||||| || ||| ||||| ||||||||||| |||||||||||||||||||    
T  2888 tctgttgctcttgcatattgatcaagttgcaggtgttggtctaagttgtaa 2938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 58 - 239
Target Start/End: Complemental strand, 33249 - 33062
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    ||||||||| |||||| |||||||||||||||| |||||||| ||||||||||||||| | |||  ||||||||||||| ||||||||  |||| || ||    
T  33249 tgtgaaataattatatgccttatgtggaaaatgtatgatgttaaagttgttgatgcttttaattaatattgttatgttgagaattgct--tgtgttg-tt 33153  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttg---------gtctaagttgtaagttgtcgttccaaagtattggattcttaagt 239  Q
    |||||| |||||||||||| |||||||||||  |||||         ||||||||||||||||||||||||||||||||||| ||||||||    
T  33152 tctgttgctgttgaatattgatcaagttgcagatgttggtttaagttgtctaagttgtaagttgtcgttccaaagtattggagtcttaagt 33062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 77 - 254
Target Start/End: Original strand, 1347 - 1529
Alignment:
Q  77 ttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatatt 176  Q
    |||||||||| ||| |||||||||||||||| | || ||||| ||  |||||||||| ||||||||||||  ||||||||| ||||| ||||||||||||    
T  1347 ttatgtggaatatgtatgatgttgaagttgtggttgtttatcgttaatattgttatgatgtgaattgctt--gtgctgttt-ctgttgctgttgaatatt 1443  T
Q  177 aatcaagttgcaagtgttggtct--------aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
     ||||||||||||||||||||||        ||||||||||||||| ||||||||||||||| |||||||| ||||||| ||||||    
T  1444 gatcaagttgcaagtgttggtctaagttgtaaagttgtaagttgtcattccaaagtattggagtcttaagttgttgatgttgtcca 1529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 58 - 236
Target Start/End: Complemental strand, 5790 - 5606
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    ||||||||| ||||||  ||||||||||||||| |||||||| ||||||||||||||| |||||  ||| ||||||||||||||||||  |||| || ||    
T  5790 tgtgaaataattatatgtcttatgtggaaaatgtatgatgtttaagttgttgatgcttttcattaatatagttatgttgtgaattgct--tgtgatg-tt 5694  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttg---------gtctaagttgtaagttgtcgttccaaagtattggattctta 236  Q
    |||||| |||||||||||| |||||||||||  |||||         ||||||||||||||||||||||||||||||||||| |||||    
T  5693 tctgttgctgttgaatattgatcaagttgcagatgttggtttaagttgtctaagttgtaagttgtcgttccaaagtattggagtctta 5606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 58 - 236
Target Start/End: Original strand, 22489 - 22673
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    ||||||||| ||||||  ||||||||||||||| |||||||| ||||||||||||||| |||||  ||||||||||||||||||||  | ||||||||||    
T  22489 tgtgaaataattatatgtcttatgtggaaaatgtatgatgtttaagttgttgatgcttttcattaatattgttatgttgtgaattg--tttgtgctgttt 22586  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgt---------tggtctaagttgtaagttgtcgttccaaagtattggattctta 236  Q
    | |||| |||||||||||| |||||||||||  |||         | ||||||||||||||||||||||||||||||||||| |||||    
T  22587 t-tgttgctgttgaatatttatcaagttgcagatgtttgtttaagttgtctaagttgtaagttgtcgttccaaagtattggagtctta 22673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 58 - 245
Target Start/End: Original strand, 1243 - 1435
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| |||||||||||||||| |||||||| || |||||||||||| |||||  |||||||| |||||||||||||  |||| || ||    
T  1243 tgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaaattgttgatgcttttcattaatattgttaagttgtgaattgct--tgtgttg-tt 1339  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtct--------aagttgtaagttgtcgttccaaagtattggattcttaagtggttga 245  Q
    |||||| ||||| |||||| ||||||||||| | ||||  ||        ||||||||||||||||||||||||||||||| |||||||| |||||    
T  1340 tctgttgctgttcaatattgatcaagttgcatgggttgacctaagttttaaagttgtaagttgtcgttccaaagtattggagtcttaagttgttga 1435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 58 - 245
Target Start/End: Original strand, 7994 - 8186
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| |||||||||||||||| |||||||| || |||||||||||| |||||  |||||||| |||||||||||||  |||| || ||    
T  7994 tgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaaattgttgatgcttttcattaatattgttaagttgtgaattgct--tgtgttg-tt 8090  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtct--------aagttgtaagttgtcgttccaaagtattggattcttaagtggttga 245  Q
    |||||| ||||| |||||| ||||||||||| | ||||  ||        ||||||||||||||||||||||||||||||| |||||||| |||||    
T  8091 tctgttgctgttcaatattgatcaagttgcatgggttgacctaagttttaaagttgtaagttgtcgttccaaagtattggagtcttaagttgttga 8186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 73; Significance: 2e-33; HSPs: 3)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 58 - 205
Target Start/End: Original strand, 10162 - 10306
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||| ||||||| |||||||||||||||| |||||||| ||||||||||||||| |||||  | ||||||| ||||||||||||  ||| ||||||    
T  10162 tgtgaaatgtttatatgccttatgtggaaaatgtatgatgtttaagttgttgatgcttttcattaattttgttattttgtgaattgct--tgtactgttt 10259  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttg 205  Q
    | |||| |||||| ||||| ||||||||||| ||||||||||||||||    
T  10260 t-tgttgctgttgcatattgatcaagttgcaggtgttggtctaagttg 10306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 58 - 115
Target Start/End: Original strand, 15492 - 15549
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgctt 115  Q
    |||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||    
T  15492 tgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttgatgctt 15549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 254
Target Start/End: Complemental strand, 36235 - 36147
Alignment:
Q  166 tgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
    ||||| |||||||| ||| |||| | || |||||||| |||||| |||| ||||||||||||||| |||||||| ||||||| ||||||    
T  36235 tgttgtatattaattaagctgcatgagtcggtctaagatgtaagatgtctttccaaagtattggagtcttaagttgttgatgttgtcca 36147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1783 (Bit Score: 72; Significance: 8e-33; HSPs: 2)
Name: scaffold1783
Description:

Target: scaffold1783; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 58 - 208
Target Start/End: Complemental strand, 460 - 313
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    ||||||||| |||||| |||||||||||||||  |||||||| ||||||||||||||| |||||  |||||||| || ||||||| ||  ||||||| ||    
T  460 tgtgaaataattatatgccttatgtggaaaatatatgatgtttaagttgttgatgcttttcattaatattgttacgtcgtgaatttct--tgtgctg-tt 364  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaa 208  Q
    ||| || |||||||||||| ||||||||||| |||||||||||||||||||    
T  363 tctattgctgttgaatattgatcaagttgcaggtgttggtctaagttgtaa 313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1783; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 245
Target Start/End: Complemental strand, 313 - 268
Alignment:
Q  200 aagttgtaagttgtcgttccaaagtattggattcttaagtggttga 245  Q
    ||||||||||||||||||||||||||||  | |||||||| |||||    
T  313 aagttgtaagttgtcgttccaaagtattatagtcttaagttgttga 268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0780 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0780
Description:

Target: scaffold0780; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 58 - 208
Target Start/End: Original strand, 3405 - 3552
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    ||||||||||||||||   |||||||||||||| |||||||| |||||||||||| || |||||  ||||||||||||||||||||||  ||| ||| ||    
T  3405 tgtgaaatatttatatgaattatgtggaaaatgtatgatgtttaagttgttgatgtttttcattaatattgttatgttgtgaattgct--tgtactg-tt 3501  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaa 208  Q
    |||||| |||||| ||||| |||||||||||  ||||||||||||||||||    
T  3502 tctgttgctgttgcatattgatcaagttgcagatgttggtctaagttgtaa 3552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 58 - 208
Target Start/End: Original strand, 1952 - 2099
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    ||||||||||||||||  ||||||||||||||| |||||||| ||||||||||| ||| |||||  ||||||||||||||||||||||  ||| ||| ||    
T  1952 tgtgaaatatttatatgtcttatgtggaaaatgtatgatgtttaagttgttgatacttttcattaatattgttatgttgtgaattgct--tgtactg-tt 2048  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaa 208  Q
    ||||||  ||||| ||||| |||||||| || |||||||||||||||||||    
T  2049 tctgttgttgttgcatattgatcaagttacaggtgttggtctaagttgtaa 2099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 58 - 208
Target Start/End: Complemental strand, 580 - 433
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| ||||||||| |||||| | |||||| ||||||||||||||| |||||  ||||||||||||||||||||  | ||| ||| ||    
T  580 tgtgaaatatttatatgccttatgtgaaaaatgtacgatgtttaagttgttgatgcttttcattaatattgttatgttgtgaattg--tttgtactg-tt 484  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaa 208  Q
    |||||| |||||| ||||| ||||||||||| ||||||||||||| |||||    
T  483 tctgttgctgttgcatattgatcaagttgcaggtgttggtctaagctgtaa 433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 58 - 208
Target Start/End: Complemental strand, 85588 - 85441
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||| || | || |||||||||||||||  |||||||| ||||||||||||||| |||||  ||||||||||||||||||||||  ||| ||| ||    
T  85588 tgtgaaatgttcagatgccttatgtggaaaatatatgatgtttaagttgttgatgcttttcattaatattgttatgttgtgaattgct--tgtactg-tt 85492  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaa 208  Q
    |||||| |||||| ||||| |||||| |||| |||||||||||||||||||    
T  85491 tctgttgctgttgcatattgatcaagatgcaggtgttggtctaagttgtaa 85441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0747
Description:

Target: scaffold0747; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 58 - 197
Target Start/End: Complemental strand, 602 - 466
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| | |||||||||||||| |||||||| ||||||||||||||  |||||  |||| |||||||||||||||||  ||| ||| ||    
T  602 tgtgaaatatttatatgcgttatgtggaaaatgtatgatgtttaagttgttgatgctcttcattaatattattatgttgtgaattgct--tgtactg-tt 506  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggt 197  Q
    |||||| |||||| ||||| ||||||||||| ||||||||    
T  505 tctgttgctgttgcatattgatcaagttgcaggtgttggt 466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 76 - 252
Target Start/End: Complemental strand, 4344 - 4163
Alignment:
Q  76 cttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatat 175  Q
    |||||||||||||||  ||||||| |||||||||||| || |||||  ||||||||||||||||||||||  |||| || |||||||| |||||| ||||    
T  4344 cttatgtggaaaatgtctgatgtttaagttgttgatgtttttcattaatattgttatgttgtgaattgct--tgtgttg-tttctgttgctgttgcatat 4248  T
Q  176 taatcaagttgcaagtgttggtctaag--------ttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    | ||||| ||||| |||||||||||||        |||||||||||| ||||||||||||||| |||||||| ||| ||| ||||    
T  4247 tgatcaaattgcaggtgttggtctaagttgtaaaattgtaagttgtctttccaaagtattggagtcttaagttgttaatgttgtc 4163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 76 - 252
Target Start/End: Complemental strand, 4344 - 4163
Alignment:
Q  76 cttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatat 175  Q
    |||||||||||||||  ||||||| |||||||||||| || |||||  ||||||||||||||||||||||  |||| || |||||||| |||||| ||||    
T  4344 cttatgtggaaaatgtctgatgtttaagttgttgatgtttttcattaatattgttatgttgtgaattgct--tgtgttg-tttctgttgctgttgcatat 4248  T
Q  176 taatcaagttgcaagtgttggtctaag--------ttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    | ||||| ||||| |||||||||||||        |||||||||||| ||||||||||||||| |||||||| ||| ||| ||||    
T  4247 tgatcaaattgcaggtgttggtctaagttgtaaaattgtaagttgtctttccaaagtattggagtcttaagttgttaatgttgtc 4163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 58 - 208
Target Start/End: Complemental strand, 202 - 49
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgt-- 155  Q
    |||||||||||||||| ||||| |||||||||| |||||||| ||||||||| ||||| |||||  ||||||||||||||||||||  | ||| ||||      
T  202 tgtgaaatatttatatgccttaggtggaaaatgtatgatgtttaagttgttggtgcttttcattaatattgttatgttgtgaattg--tttgtactgttt 105  T
Q  156 ---tttctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaa 208  Q
       |||||||| |||||| ||||||| ||||||||| |||||||||||| ||||||    
T  104 ctgtttctgttgctgttgcatattaagcaagttgcaggtgttggtctaatttgtaa 49  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 64; Significance: 5e-28; HSPs: 2)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 94 - 208
Target Start/End: Original strand, 13490 - 13601
Alignment:
Q  94 gatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatattaatcaagttgcaagtgt 193  Q
    |||||| ||||||||||||||| |||||  ||||||||||||||||||||||  ||||||| |||||||| || ||||||||| ||||||||||| ||||    
T  13490 gatgtttaagttgttgatgcttctcattaatattgttatgttgtgaattgct--tgtgctg-tttctgttgctattgaatattgatcaagttgcatgtgt 13586  T
Q  194 tggtctaagttgtaa 208  Q
    |||||||||||||||    
T  13587 tggtctaagttgtaa 13601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 13661 - 13704
Alignment:
Q  196 gtctaagttgtaagttgtcgttccaaagtattggattcttaagt 239  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||    
T  13661 gtctaagttgtaagttgtcattccaaagtattggagtcttaagt 13704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 58 - 252
Target Start/End: Original strand, 24675 - 24872
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| |||||| ||||||||| |||||||| ||||||||||||||| |||||  |||||||||||| |||||||||  ||| ||| ||    
T  24675 tgtgaaatatttatatgccttatctggaaaatgtatgatgtttaagttgttgatgctt-tcattaatattgttatgttctgaattgct--tgtactg-tt 24770  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgt--------aagttgtcgttccaaagtattggattcttaagtggttgatgat 249  Q
    ||||||  ||||| ||||| ||||||||||| ||||| || ||||||||        |||||||| ||||||||||||||| |||||||| ||| ||| |    
T  24771 tctgttgttgttgcatattgatcaagttgcaggtgtt-gtttaagttgtaaagtttgaagttgtctttccaaagtattggagtcttaagttgttaatgtt 24869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 58 - 208
Target Start/End: Original strand, 70548 - 70689
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    ||||||||| |||||| |||||||||||||||  |||||||| ||||||||||||||| |||||  |||||||||||||||||||| || |||           
T  70548 tgtgaaataattatatgccttatgtggaaaatatatgatgtttaagttgttgatgcttttcattaatattgttatgttgtgaattgtttgtgt------- 70640  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaa 208  Q
      |||| |||||| ||||| ||||||||||| |||||||||||||||||||    
T  70641 --tgtttctgttgcatattgatcaagttgcaggtgttggtctaagttgtaa 70689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 76 - 208
Target Start/End: Complemental strand, 15766 - 15637
Alignment:
Q  76 cttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatat 175  Q
    ||||||||||||||| |||||||| ||||||||| ||||| |||||  ||||||||||||||||||||||  |||  || |||||||| |||||| ||||    
T  15766 cttatgtggaaaatgtatgatgtttaagttgttggtgcttttcattaatattgttatgttgtgaattgct--tgtattg-tttctgttgctgttgcatat 15670  T
Q  176 taatcaagttgcaagtgttggtctaagttgtaa 208  Q
    | ||||||||||||||||||||| || ||||||    
T  15669 tgatcaagttgcaagtgttggtcgaatttgtaa 15637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 58 - 239
Target Start/End: Complemental strand, 67304 - 67118
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    ||||||||||||||||   | ||||| |||||| |||||||| ||||||||||||||  |||||  ||||||||||||||||||||||  ||| ||| ||    
T  67304 tgtgaaatatttatatgaataatgtgaaaaatgtatgatgtttaagttgttgatgctcttcattaatattgttatgttgtgaattgct--tgtactg-tt 67208  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtct--------aagttgtaagttgtcgttccaaagtattggattcttaagt 239  Q
    ||||||  ||||| ||||| ||| ||||||| ||||||||||        ||||||||||||||| ||||||||||||||| ||||||||    
T  67207 tctgttgttgttgcatattgatccagttgcaggtgttggtctaagttataaagttgtaagttgtctttccaaagtattggagtcttaagt 67118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 58 - 230
Target Start/End: Complemental strand, 7877 - 7701
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| |||||||||||||||| |||| ||| |||| |||||||||| |||||  |||||  ||||||||||||| || |||  |||||    
T  7877 tgtgaaatatttatatgccttatgtggaaaatgtatgaagtt-aagtggttgatgcttctcattaatattgacatgttgtgaattgtttgtgt--tgttt 7781  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtct--------aagttgtaagttgtcgttccaaagtattgga 230  Q
     ||||| |||||||||||| ||||||||||| |||||| |||        ||||| |||||||||||||||||||||||||    
T  7780 -ctgttgctgttgaatattgatcaagttgcaggtgttgctctaaattgtaaagttataagttgtcgttccaaagtattgga 7701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 254
Target Start/End: Complemental strand, 7679 - 7621
Alignment:
Q  196 gtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
    ||||||||||| ||| ||| ||||||||||||||| |||||||| || |||| ||||||    
T  7679 gtctaagttgtgagtggtcattccaaagtattggagtcttaagttgtcgatgttgtcca 7621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 71344 - 71256
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    |||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||  ||||  |||||||||||||||||||||||    
T  71344 tgtgaaatatttatatgccttatgtggaaaatgtatgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgctt 71256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 58 - 208
Target Start/End: Original strand, 6980 - 7127
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||| ||||||| | |||||||||||||| |||||||| ||||||||||||||  |||||  || ||||| | |||| ||||||  ||| ||| ||    
T  6980 tgtgaaatttttatatgcgttatgtggaaaatgtatgatgtttaagttgttgatgctcttcattaatactgttacgatgtgtattgct--tgtactg-tt 7076  T
Q  158 tctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaa 208  Q
    |||||| |||||| ||||| ||||||||||| |||||||||||||||||||    
T  7077 tctgttgctgttgcatattgatcaagttgcaggtgttggtctaagttgtaa 7127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0741 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0741
Description:

Target: scaffold0741; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 79 - 208
Target Start/End: Original strand, 6851 - 6977
Alignment:
Q  79 atgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatattaa 178  Q
    |||||||||||| |||||||| ||||||||||||||  |||||  |||||||||| |||||||||||  ||| ||| ||||||||  ||||| ||||| |    
T  6851 atgtggaaaatgtatgatgtttaagttgttgatgctcttcattaatattgttatgatgtgaattgct--tgtactg-tttctgttgttgttgcatattga 6947  T
Q  179 tcaagttgcaagtgttggtctaagttgtaa 208  Q
    |||||||||| |||||||||||||||||||    
T  6948 tcaagttgcaggtgttggtctaagttgtaa 6977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 39295 - 39207
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    |||||||||||||||| |||||||||||| ||| |||||||| |||||||||||||||  ||||  |||||||||||||||||||||||    
T  39295 tgtgaaatatttatatgccttatgtggaagatgtatgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgctt 39207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 166 - 252
Target Start/End: Complemental strand, 10528 - 10442
Alignment:
Q  166 tgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    ||||| ||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||| ||| ||| ||||    
T  10528 tgttgcatattgatcaagttgcaggtgttggtctaagttgtaagttgtctttccaaagtattggaatcttaagttgttaatgttgtc 10442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 58 - 158
Target Start/End: Original strand, 207661 - 207759
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    |||||||||||||||| |||||||||||| ||| |||||||| |||||||||||||||  ||||  ||||||||| ||||||||||||  ||||||||||    
T  207661 tgtgaaatatttatatgccttatgtggaagatgtatgatgtttaagttgttgatgcttcacattaatattgttatcttgtgaattgct--tgtgctgttt 207758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 160 - 252
Target Start/End: Complemental strand, 8092 - 8000
Alignment:
Q  160 tgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    |||| |||||| ||||| || |||||||| ||||||||||||||||||||||||| ||||||||| ||||| |||||||| ||||||| ||||    
T  8092 tgttgctgttgcatattgataaagttgcaggtgttggtctaagttgtaagttgtctttccaaagtgttggagtcttaagttgttgatgttgtc 8000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 11565 - 11692
Alignment:
Q  77 ttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggt-attgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatat 175  Q
    ||||||| ||| || |||||||||||||||||| || ||||||||| | |||| |||||||||| ||||||| ||||||  | |||||  ||||||||||    
T  11565 ttatgtgaaaagtgtatgatgttgaagttgttgttgattatcattgattattgatatgttgtgagttgcttacgtgctgcct-ctgttgttgttgaatat 11663  T
Q  176 taatcaagttgcaagtgttggtctaagtt 204  Q
    | || ||||||||||||||||||||||||    
T  11664 tgattaagttgcaagtgttggtctaagtt 11692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 20288 - 20376
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    ||||||||||||||||  ||||||||||| ||| |||||||| |||||||||||||||  ||||  |||||||||||||||||||||||    
T  20288 tgtgaaatatttatataacttatgtggaagatgtatgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgctt 20376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 31166 - 31078
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    |||||||||||||||| |||||||||||| ||| |||||||| |||||||||||||||  ||||  |||||||||||| ||||||||||    
T  31166 tgtgaaatatttatatgccttatgtggaagatgtatgatgtttaagttgttgatgcttcacattaatattgttatgttttgaattgctt 31078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 177 - 252
Target Start/End: Complemental strand, 126946 - 126871
Alignment:
Q  177 aatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||| ||| ||| ||||    
T  126946 aatcaagttgcaggtgttggtctaagttgtaagttgtctttccaaagtattggaatcttaagttgttaatgttgtc 126871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 5260 - 5346
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  5260 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 5346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Complemental strand, 12369 - 12283
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  12369 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 12283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 51; Significance: 3e-20; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 61771 - 61857
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  61771 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 61857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 65687 - 65773
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  65687 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 65773  T

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Target: scaffold0029; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 143
Target Start/End: Complemental strand, 80662 - 80577
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattg 143  Q
    |||||||||||||||| |||||||||||| |||  ||||||| ||||||||||| |||   | |  ||||||||||||||||||||    
T  80662 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatacttcataataatattgttatgttgtgaattg 80577  T

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Target: scaffold0028 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 58878 - 58964
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  58878 tgtgaaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 58964  T

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Target: scaffold0282 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 166 - 254
Target Start/End: Original strand, 18233 - 18321
Alignment:
Q  166 tgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
    ||||| |||||||| |||||||| |||| |||||||| |||||| |||||| ||||||||||||| |||||||| ||||||| ||||||    
T  18233 tgttgtatattaattaagttgcatgtgtcggtctaagatgtaagatgtcgtcccaaagtattggagtcttaagttgttgatgttgtcca 18321  T

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Target: scaffold0018 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 208
Target Start/End: Complemental strand, 20774 - 20698
Alignment:
Q  129 ttatgttgtgaattgcttatgtgctgttttctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaa 208  Q
    ||||||||||||||||||  ||||||||| ||||| |||||||||||| ||||||||||| |||||||||||||||||||    
T  20774 ttatgttgtgaattgctt--gtgctgttt-ctgttgctgttgaatattgatcaagttgcaggtgttggtctaagttgtaa 20698  T

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Target: scaffold0018; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 7411 - 7536
Alignment:
Q  77 ttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatatt 176  Q
    |||||| ||| ||| ||||||||||| |||||  || |||||||||   |||| ||||||||| ||| ||||||||||  | |||||  |||||||||||    
T  7411 ttatgtagaatatgtatgatgttgaaattgttattgtttatcattgacgttgt-atgttgtgagttgtttatgtgctgcgt-ctgttgttgttgaatatt 7508  T
Q  177 aatcaagttgcaagtgttggtctaagtt 204  Q
     || ||||||||||||||||||||||||    
T  7509 gattaagttgcaagtgttggtctaagtt 7536  T

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Target: scaffold0061 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 62 - 144
Target Start/End: Original strand, 67464 - 67546
Alignment:
Q  62 aaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||| |||||||||||| |||  ||||||| |||||||||||||||  ||||  |||||||||||||||||||||    
T  67464 aaatatttatatgccttatgtggaagatgtttgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgc 67546  T

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Target: scaffold0331 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 80 - 204
Target Start/End: Original strand, 12878 - 13002
Alignment:
Q  80 tgtggaaaatgaatgatgttgaagttgttgatgcttatcattggt-attgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatattaa 178  Q
    |||||||||||  |||| |||||||||| | || ||| ||||| | ||||||||||||||| ||||||||||||||   |||| |  |||||||||||||    
T  12878 tgtggaaaatgtttgatcttgaagttgtcgttgattaccattgattattgttatgttgtgagttgcttatgtgctg-cctctgctgatgttgaatattaa 12976  T
Q  179 tcaagttgcaagtgttggtctaagtt 204  Q
    | ||||||||||||| ||||||||||    
T  12977 ttaagttgcaagtgtcggtctaagtt 13002  T

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Target: scaffold0031 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 36245 - 36333
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    ||||||||||||||||  ||||||||||| ||| |||||||| ||||||||||| |||   |||  |||||||||||||||||||||||    
T  36245 tgtgaaatatttatatgacttatgtggaagatgtatgatgtttaagttgttgatactttatattaatattgttatgttgtgaattgctt 36333  T

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Target: scaffold0026 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 21392 - 21265
Alignment:
Q  77 ttatgtggaaaatgaatgatgttgaagttgttgatgcttat-cattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatat 175  Q
    |||||||||| ||| |||||||||||||||||  || |||| ||||    ||||||||||||||  || ||||||||||  | |||||  ||||||||||    
T  21392 ttatgtggaatatgtatgatgttgaagttgttattgtttattcatttacgttgttatgttgtgagctgtttatgtgctgcct-ctgttgttgttgaatat 21294  T
Q  176 taatcaagttgcaagtgttggtctaagtt 204  Q
    |||| ||||||||||||||||||||||||    
T  21293 taattaagttgcaagtgttggtctaagtt 21265  T

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Target: scaffold0012 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 189536 - 189624
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    ||||||||||||||||  ||||||||||| ||| |||||||| ||||||||||| |||   |||  |||||||||||||||||||||||    
T  189536 tgtgaaatatttatatgacttatgtggaagatgtatgatgtttaagttgttgatactttatattaatattgttatgttgtgaattgctt 189624  T

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Target: scaffold0012; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 247
Target Start/End: Original strand, 221278 - 221353
Alignment:
Q  172 atattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatg 247  Q
    |||||||| ||| |||| |||| |||||||| |||||| ||||||||||||||||||||  ||||||| |||||||    
T  221278 atattaattaagctgcatgtgtcggtctaagatgtaagatgtcgttccaaagtattggaggcttaagttgttgatg 221353  T

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Target: scaffold0010 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 239
Target Start/End: Complemental strand, 708 - 629
Alignment:
Q  160 tgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattggattcttaagt 239  Q
    |||| |||||| |||||||| ||| |||| |||| |||||||| |||||| |||||||||||||||||||| ||||||||    
T  708 tgttgctgttgtatattaattaagctgcatgtgtcggtctaagatgtaagatgtcgttccaaagtattggagtcttaagt 629  T

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Target: scaffold0676 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 144
Target Start/End: Complemental strand, 397 - 311
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgc 144  Q
    |||||||||||||||| ||||||||| || |||  ||||||| ||||| |||||||||  ||||  |||||||||||||||||||||    
T  397 tgtgaaatatttatatgccttatgtgaaagatgtttgatgtttaagttattgatgcttcacattaatattgttatgttgtgaattgc 311  T

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Target: scaffold0108 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 246
Target Start/End: Complemental strand, 3318 - 3232
Alignment:
Q  160 tgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgat 246  Q
    |||| |||||| |||||||| ||| |||| |||| |||||||| |||||| |||||| ||||||||||||| |||||||| ||||||    
T  3318 tgttgctgttgtatattaattaagctgcatgtgtcggtctaagatgtaagatgtcgtcccaaagtattggagtcttaagttgttgat 3232  T

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Target: scaffold0716 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 82 - 154
Target Start/End: Complemental strand, 1187 - 1114
Alignment:
Q  82 tggaaaatgaatgatgttgaagttgttgatgcttatcattg-gtattgttatgttgtgaattgcttatgtgctg 154  Q
    ||||||||| |||||||||||||||||| || |||||||||  ||||| |||||||||| ||||||||||||||    
T  1187 tggaaaatgtatgatgttgaagttgttgttgattatcattgattattgctatgttgtgagttgcttatgtgctg 1114  T

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Target: scaffold0525 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 58 - 143
Target Start/End: Original strand, 4034 - 4119
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattg 143  Q
    |||||||||||||||| |||||||||||| |||  | ||||| |||||||||||||||  ||||  |||||||||||| |||||||    
T  4034 tgtgaaatatttatatgccttatgtggaagatgtttaatgtttaagttgttgatgcttcacattaatattgttatgttatgaattg 4119  T

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Target: scaffold0200 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 58 - 115
Target Start/End: Complemental strand, 17616 - 17559
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgctt 115  Q
    |||||||||||||||| |||||||||||| ||| |||||||| |||||||||||||||    
T  17616 tgtgaaatatttatatgccttatgtggaagatgtatgatgtttaagttgttgatgctt 17559  T

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Target: scaffold0025 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 208
Target Start/End: Complemental strand, 78380 - 78299
Alignment:
Q  124 tattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaa 208  Q
    ||||| |||||||||||||||||  || |||||| ||||| |||||| ||||| ||||||||||| |||||||||||||||||||    
T  78380 tattgctatgttgtgaattgctt--gtactgttt-ctgttgctgttgcatattgatcaagttgcaggtgttggtctaagttgtaa 78299  T

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Target: scaffold0415 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 342 - 254
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    ||||||||||||||||  |||||||| || ||| |||||||| ||||||||||| |||   |||  |||||||||||||||||||||||    
T  342 tgtgaaatatttatatgacttatgtgaaagatgtatgatgtttaagttgttgatacttcatattaatattgttatgttgtgaattgctt 254  T

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Target: scaffold0229 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 11660 - 11748
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    ||||||||||||||||  |||||||| || ||| |||||||| ||||||||||| |||   |||  |||||||||||||||||||||||    
T  11660 tgtgaaatatttatatgacttatgtgaaagatgtatgatgtttaagttgttgatacttcatattaatattgttatgttgtgaattgctt 11748  T

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Target: scaffold0141 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 14246 - 14334
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    ||||||||||||||||  ||||||||||| ||  |||||||| ||||||||||| |||   |||  |||||||||||||||||||||||    
T  14246 tgtgaaatatttatatgacttatgtggaagatatatgatgtttaagttgttgatactttatattaatattgttatgttgtgaattgctt 14334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 157
Target Start/End: Original strand, 36101 - 36198
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgcttatgtgctgttt 157  Q
    ||||||||| |||||| |||||||||||| ||| |||||||| ||||||||||| |||   | |  |||||||||||||||||||||  |||||||||||    
T  36101 tgtgaaatacttatatgccttatgtggaagatgtatgatgtttaagttgttgatacttcataataatattgttatgttgtgaattgc--atgtgctgttt 36198  T

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Target: scaffold0074 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 254
Target Start/End: Complemental strand, 8216 - 8128
Alignment:
Q  166 tgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
    ||||||||||| |  ||| |||| |||| ||||| || |||||| |||||||||||||||||||| |||||||| ||||||| ||||||    
T  8216 tgttgaatattgactaagctgcatgtgtcggtcttagatgtaagatgtcgttccaaagtattggagtcttaagttgttgatgttgtcca 8128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 2654 - 2705
Alignment:
Q  196 gtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatg 247  Q
    |||||||||||||||||||||||||||||||||||  ||||||| |||||||    
T  2654 gtctaagttgtaagttgtcgttccaaagtattggagccttaagttgttgatg 2705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 80496 - 80551
Alignment:
Q  60 tgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgctt 115  Q
    |||||||||||||| |||||||||||| ||| |||||||| |||||||||||||||    
T  80496 tgaaatatttatatgccttatgtggaagatgtatgatgtttaagttgttgatgctt 80551  T

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Target: scaffold0396 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 254
Target Start/End: Complemental strand, 1955 - 1861
Alignment:
Q  160 tgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
    |||| |||||| |||||||| ||| |||| |||| | |||||  |||||| |||||| ||||||||||||| |||||||| ||||||| ||||||    
T  1955 tgttgctgttgtatattaattaagctgcatgtgtcgttctaatatgtaaggtgtcgtcccaaagtattggagtcttaagttgttgatgttgtcca 1861  T

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Target: scaffold0157 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 32819 - 32907
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    ||||||||||||||||  |||||||| || ||| |||||||| || |||||||| |||   |||  |||||||||||||||||||||||    
T  32819 tgtgaaatatttatatgacttatgtgaaagatgtatgatgtttaaattgttgatacttcatattaatattgttatgttgtgaattgctt 32907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 146
Target Start/End: Complemental strand, 6928 - 6874
Alignment:
Q  92 atgatgttgaagttgttgatgcttatcattggtattgttatgttgtgaattgctt 146  Q
    |||||||| |||||||||||||||  ||||  |||||||||||||||||||||||    
T  6928 atgatgtttaagttgttgatgcttcacattaatattgttatgttgtgaattgctt 6874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 39360 - 39283
Alignment:
Q  126 ttgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatattaatcaagttgcaagtgttggtctaagtt 204  Q
    |||||||||||||| ||| |||||||||   | |||||  |||||||||||||| |||||||||||||| |||||||||    
T  39360 ttgttatgttgtgagttgtttatgtgctccgt-ctgttgttgttgaatattaattaagttgcaagtgtttgtctaagtt 39283  T

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Target: scaffold0065 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 55076 - 55038
Alignment:
Q  166 tgttgaatattaatcaagttgcaagtgttggtctaagtt 204  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  55076 tgttgaatattaattaagttgcaagtgttggtctaagtt 55038  T

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Target: scaffold0802 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 252
Target Start/End: Original strand, 5638 - 5690
Alignment:
Q  200 aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    ||||||||||||||| ||||||||||||||| |||||||| ||| ||| ||||    
T  5638 aagttgtaagttgtctttccaaagtattggagtcttaagttgttaatgttgtc 5690  T

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Target: scaffold0335 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 252
Target Start/End: Complemental strand, 775 - 723
Alignment:
Q  200 aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    ||||||||||||||| ||||||||||||||| |||||||| ||| ||| ||||    
T  775 aagttgtaagttgtctttccaaagtattggagtcttaagttgttaatgttgtc 723  T

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Target: scaffold0170 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 254
Target Start/End: Complemental strand, 3011 - 2923
Alignment:
Q  166 tgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
    ||||| |||||||| ||| |||| |||| ||| |||| ||||||  ||||||||||||| ||||| || ||||| ||||||| ||||||    
T  3011 tgttgtatattaattaagctgcatgtgtcggtttaagatgtaagaggtcgttccaaagtgttggagtcctaagttgttgatgttgtcca 2923  T

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Target: scaffold0019 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 239
Target Start/End: Complemental strand, 21889 - 21808
Alignment:
Q  166 tgttgaatattaatcaagttgcaagtgttggtctaagttgtaa--------gttgtcgttccaaagtattggattcttaagt 239  Q
    ||||| ||||| ||||||||||| |||||||||||||||||||        |||||| ||||||||||||||| ||||||||    
T  21889 tgttgcatattgatcaagttgcaggtgttggtctaagttgtaaagttgtaagttgtctttccaaagtattggagtcttaagt 21808  T

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Target: scaffold0019; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 247
Target Start/End: Complemental strand, 132942 - 132891
Alignment:
Q  195 ggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatg 247  Q
    |||||||| |||||| |||||| ||||||||||||| |||||||| |||||||    
T  132942 ggtctaagatgtaagatgtcgt-ccaaagtattggagtcttaagttgttgatg 132891  T

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Target: scaffold0004 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 252
Target Start/End: Complemental strand, 362793 - 362741
Alignment:
Q  200 aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    ||||||||||||||| ||||||||||||||| |||||||| ||| ||| ||||    
T  362793 aagttgtaagttgtctttccaaagtattggaatcttaagttgttaatgttgtc 362741  T

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Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 230
Target Start/End: Complemental strand, 109356 - 109307
Alignment:
Q  181 aagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattgga 230  Q
    |||||||||||||||||| |||||||||||||| || ||||  |||||||    
T  109356 aagttgcaagtgttggtcaaagttgtaagttgttgtcccaagatattgga 109307  T

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Target: scaffold0162 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 203
Target Start/End: Original strand, 24873 - 24998
Alignment:
Q  77 ttatgtggaaaatgaatgatgttgaagttgttgatgcttat-cattggtattgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatat 175  Q
    |||||||||| ||| |||||||||||||||||  || |||| ||||    ||||||||||||||  || ||||||||||  | ||||   ||| ||||||    
T  24873 ttatgtggaatatgtatgatgttgaagttgttattgtttattcattaacgttgttatgttgtgagctgtttatgtgctgcct-ctgtgt-tgtcgaatat 24970  T
Q  176 taatcaagttgcaagtgttggtctaagt 203  Q
    |||| |||||||||||||||||||||||    
T  24971 taattaagttgcaagtgttggtctaagt 24998  T

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Target: scaffold0054 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 222
Target Start/End: Original strand, 75900 - 75951
Alignment:
Q  171 aatattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaa 222  Q
    ||||||||||||| |||| ||||||||||||| |||||| ||| ||||||||    
T  75900 aatattaatcaagctgcatgtgttggtctaagatgtaagatgttgttccaaa 75951  T

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Target: scaffold1539 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1539
Description:

Target: scaffold1539; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 254
Target Start/End: Complemental strand, 999 - 905
Alignment:
Q  160 tgttactgttgaatattaatcaagttgcaagtgttggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtcca 254  Q
    |||| |||||| |||||||| ||| |||| |||| ||| |||| | ||||  ||||||||||||| ||||| || ||||| ||||||| ||||||    
T  999 tgttgctgttgtatattaattaagctgcatgtgtcggtttaagatctaagaggtcgttccaaagtgttggagtcctaagttgttgatgttgtcca 905  T

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Target: scaffold0575 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 112
Target Start/End: Original strand, 6237 - 6291
Alignment:
Q  58 tgtgaaatatttatattccttatgtggaaaatgaatgatgttgaagttgttgatg 112  Q
    ||||||||||||||||  ||||||||||||||  | |||||| ||||||||||||    
T  6237 tgtgaaatatttatatggcttatgtggaaaatatacgatgtttaagttgttgatg 6291  T

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Target: scaffold0047 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 78283 - 78206
Alignment:
Q  126 ttgttatgttgtgaattgcttatgtgctgttttctgttactgttgaatattaatcaagttgcaagtgttggtctaagtt 204  Q
    ||||||||||||||  || ||||||||||  | |||||  ||||||||||| || ||||||| ||||||||||||||||    
T  78283 ttgttatgttgtgagctgtttatgtgctgcct-ctgttgttgttgaatatttattaagttgcgagtgttggtctaagtt 78206  T

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Target: scaffold0577 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 252
Target Start/End: Complemental strand, 7828 - 7776
Alignment:
Q  200 aagttgtaagttgtcgttccaaagtattggattcttaagtggttgatgatgtc 252  Q
    ||||||||||||||| ||||||||||||||| |||| ||| ||| ||| ||||    
T  7828 aagttgtaagttgtctttccaaagtattggagtctttagttgttaatgttgtc 7776  T

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Target: scaffold0337 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 9815 - 9866
Alignment:
Q  195 ggtctaagttgtaagttgtcgttccaaagtattggattcttaagtggttgatg 247  Q
    |||||||| |||||| |||||| ||||||||||||| |||||||| |||||||    
T  9815 ggtctaagatgtaagatgtcgt-ccaaagtattggagtcttaagttgttgatg 9866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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