View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0755_low_120 (Length: 267)

Name: NF0755_low_120
Description: NF0755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0755_low_120
NF0755_low_120
[»] chr8 (31 HSPs)
chr8 (4-267)||(21395780-21396043)
chr8 (4-267)||(21790273-21790536)
chr8 (4-263)||(21389254-21389513)
chr8 (4-146)||(21778697-21778839)
chr8 (1-151)||(31971311-31971463)
chr8 (1-151)||(16199559-16199710)
chr8 (1-151)||(45130911-45131063)
chr8 (137-267)||(17353735-17353865)
chr8 (137-267)||(19899286-19899416)
chr8 (1-149)||(21918915-21919067)
chr8 (5-151)||(20536266-20536416)
chr8 (1-151)||(18879150-18879298)
chr8 (137-267)||(24755912-24756042)
chr8 (94-267)||(16184877-16185049)
chr8 (2-151)||(28648957-28649110)
chr8 (137-267)||(19983284-19983414)
chr8 (156-267)||(19976655-19976766)
chr8 (137-267)||(21161856-21161986)
chr8 (1-151)||(22626790-22626943)
chr8 (84-267)||(23776632-23776816)
chr8 (1-151)||(18818322-18818476)
chr8 (1-151)||(22875119-22875273)
chr8 (82-151)||(25363053-25363123)
chr8 (1-134)||(16092272-16092409)
chr8 (137-267)||(20465837-20465967)
chr8 (137-267)||(21168519-21168649)
chr8 (137-264)||(377469-377596)
chr8 (1-151)||(7372832-7372978)
chr8 (19-151)||(23648628-23648761)
chr8 (1-151)||(21923841-21923995)
chr8 (137-194)||(17926578-17926635)
[»] scaffold0351 (1 HSPs)
scaffold0351 (1-151)||(16337-16487)
[»] chr2 (21 HSPs)
chr2 (2-151)||(20309164-20309313)
chr2 (32-267)||(40622006-40622244)
chr2 (1-151)||(38029-38181)
chr2 (138-267)||(23038227-23038356)
chr2 (1-207)||(23103254-23103462)
chr2 (81-267)||(22740758-22740945)
chr2 (1-164)||(23285919-23286082)
chr2 (81-267)||(22758513-22758700)
chr2 (138-267)||(23019504-23019633)
chr2 (1-151)||(22731147-22731301)
chr2 (21-151)||(22738093-22738224)
chr2 (96-267)||(22798924-22799094)
chr2 (1-151)||(298727-298881)
chr2 (26-164)||(23654286-23654425)
chr2 (1-151)||(23076496-23076650)
chr2 (1-151)||(23660077-23660230)
chr2 (1-146)||(23060567-23060716)
chr2 (142-267)||(45677953-45678078)
chr2 (21-151)||(22337192-22337323)
chr2 (202-267)||(23101028-23101093)
chr2 (137-194)||(25963588-25963645)
[»] scaffold0106 (2 HSPs)
scaffold0106 (1-151)||(1344-1494)
scaffold0106 (4-151)||(7324-7471)
[»] chr7 (21 HSPs)
chr7 (1-151)||(27847746-27847896)
chr7 (44-267)||(17137861-17138083)
chr7 (1-151)||(40443446-40443597)
chr7 (44-267)||(12187113-12187335)
chr7 (81-267)||(18154634-18154821)
chr7 (137-267)||(9703458-9703588)
chr7 (1-151)||(12698885-12699040)
chr7 (5-151)||(9509247-9509397)
chr7 (1-164)||(26212050-26212217)
chr7 (94-261)||(24054618-24054784)
chr7 (2-151)||(18456326-18456478)
chr7 (1-151)||(10589093-10589246)
chr7 (156-267)||(11880463-11880574)
chr7 (6-151)||(16386160-16386309)
chr7 (81-264)||(19649285-19649469)
chr7 (2-134)||(38227536-38227671)
chr7 (141-267)||(12321540-12321666)
chr7 (1-134)||(3564294-3564431)
chr7 (1-64)||(2530139-2530203)
chr7 (1-63)||(48273443-48273508)
chr7 (229-267)||(10508880-10508918)
[»] scaffold0021 (2 HSPs)
scaffold0021 (1-265)||(174821-175086)
scaffold0021 (38-151)||(124679-124793)
[»] scaffold0032 (1 HSPs)
scaffold0032 (1-151)||(51637-51787)
[»] chr4 (25 HSPs)
chr4 (1-151)||(17046542-17046692)
chr4 (7-151)||(14053215-14053361)
chr4 (32-267)||(15121601-15121834)
chr4 (1-164)||(12902811-12902978)
chr4 (137-267)||(13569703-13569833)
chr4 (1-164)||(7088931-7089098)
chr4 (137-267)||(23843669-23843799)
chr4 (4-151)||(44052886-44053037)
chr4 (84-267)||(15093911-15094094)
chr4 (21-151)||(22636512-22636642)
chr4 (2-151)||(16270149-16270301)
chr4 (1-151)||(23374272-23374426)
chr4 (137-265)||(44675823-44675951)
chr4 (137-267)||(12570212-12570342)
chr4 (1-151)||(16377436-16377588)
chr4 (2-151)||(16239883-16240035)
chr4 (181-267)||(15124952-15125038)
chr4 (1-127)||(7798828-7798958)
chr4 (72-151)||(3096772-3096851)
chr4 (82-147)||(17047989-17048055)
chr4 (1-151)||(14038702-14038856)
chr4 (1-64)||(43256161-43256225)
chr4 (138-267)||(16487876-16488005)
chr4 (2-151)||(7893758-7893908)
chr4 (1-65)||(52873367-52873434)
[»] scaffold0598 (1 HSPs)
scaffold0598 (4-151)||(965-1112)
[»] chr5 (30 HSPs)
chr5 (1-267)||(37723958-37724225)
chr5 (44-267)||(22032415-22032637)
chr5 (44-263)||(18769806-18770024)
chr5 (137-267)||(26704257-26704387)
chr5 (137-267)||(26973990-26974120)
chr5 (1-151)||(21292883-21293036)
chr5 (44-267)||(23572178-23572400)
chr5 (137-267)||(23201559-23201690)
chr5 (1-146)||(8286760-8286910)
chr5 (138-267)||(14079340-14079469)
chr5 (84-267)||(21873387-21873570)
chr5 (1-151)||(23390409-23390563)
chr5 (137-265)||(23501145-23501273)
chr5 (2-151)||(24493624-24493776)
chr5 (1-164)||(22075073-22075240)
chr5 (1-151)||(9078006-9078160)
chr5 (4-151)||(24529277-24529428)
chr5 (1-151)||(25431448-25431602)
chr5 (157-267)||(23512318-23512428)
chr5 (2-151)||(13025366-13025518)
chr5 (2-151)||(13095550-13095702)
chr5 (4-151)||(25421589-25421740)
chr5 (1-65)||(21729064-21729131)
chr5 (1-65)||(21808389-21808456)
chr5 (1-64)||(18356369-18356433)
chr5 (1-64)||(20910800-20910864)
chr5 (81-164)||(22107273-22107357)
chr5 (4-63)||(22412241-22412302)
chr5 (21-144)||(1096544-1096668)
chr5 (4-65)||(18418638-18418699)
[»] scaffold0215 (1 HSPs)
scaffold0215 (32-266)||(26911-27143)
[»] chr6 (30 HSPs)
chr6 (1-151)||(16920546-16920696)
chr6 (1-151)||(22831558-22831710)
chr6 (12-152)||(11185571-11185711)
chr6 (4-118)||(35245644-35245758)
chr6 (1-151)||(20360873-20361027)
chr6 (137-267)||(19863171-19863301)
chr6 (137-267)||(19873313-19873443)
chr6 (81-267)||(25641981-25642168)
chr6 (94-267)||(22438951-22439123)
chr6 (137-267)||(22432443-22432573)
chr6 (4-151)||(20638196-20638347)
chr6 (137-267)||(22334689-22334819)
chr6 (1-151)||(29060594-29060748)
chr6 (137-265)||(15894229-15894357)
chr6 (1-151)||(20593827-20593981)
chr6 (21-151)||(25629268-25629399)
chr6 (137-267)||(21739820-21739950)
chr6 (168-267)||(16924677-16924776)
chr6 (1-151)||(18409740-18409894)
chr6 (137-267)||(18907299-18907429)
chr6 (1-65)||(16496298-16496365)
chr6 (203-267)||(16965108-16965172)
chr6 (1-64)||(27415942-27416006)
chr6 (21-151)||(19303454-19303585)
chr6 (168-266)||(31164646-31164744)
chr6 (19-267)||(15041348-15041596)
chr6 (5-151)||(22780140-22780290)
chr6 (137-267)||(21834688-21834818)
chr6 (1-65)||(20076754-20076817)
chr6 (1-147)||(17287713-17287863)
[»] scaffold0718 (1 HSPs)
scaffold0718 (4-151)||(5044-5191)
[»] chr1 (23 HSPs)
chr1 (1-151)||(38801304-38801454)
chr1 (81-267)||(21714684-21714871)
chr1 (2-164)||(27250629-27250795)
chr1 (137-265)||(20091273-20091401)
chr1 (82-249)||(48603652-48603820)
chr1 (137-267)||(42865009-42865139)
chr1 (21-151)||(22354485-22354616)
chr1 (19-267)||(21787840-21788088)
chr1 (19-267)||(22468494-22468742)
chr1 (1-164)||(21026734-21026901)
chr1 (1-151)||(50210126-50210280)
chr1 (1-147)||(22532323-22532473)
chr1 (1-151)||(34509834-34509988)
chr1 (137-267)||(22831176-22831306)
chr1 (137-267)||(6152046-6152176)
chr1 (19-151)||(20135262-20135395)
chr1 (138-267)||(21022830-21022959)
chr1 (137-267)||(18181919-18182049)
chr1 (1-63)||(21896258-21896322)
chr1 (72-151)||(22356087-22356168)
chr1 (72-151)||(22357773-22357854)
chr1 (1-64)||(33797575-33797639)
chr1 (1-63)||(21861572-21861636)
[»] scaffold0456 (1 HSPs)
scaffold0456 (1-151)||(10339-10489)
[»] scaffold0427 (1 HSPs)
scaffold0427 (1-151)||(13551-13703)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-151)||(32121-32272)
[»] scaffold0064 (1 HSPs)
scaffold0064 (4-151)||(47053-47200)
[»] scaffold0114 (2 HSPs)
scaffold0114 (2-151)||(15378-15529)
scaffold0114 (32-267)||(7378-7611)
[»] scaffold0131 (1 HSPs)
scaffold0131 (81-267)||(36592-36779)
[»] scaffold1124 (1 HSPs)
scaffold1124 (44-267)||(1975-2197)
[»] scaffold0210 (2 HSPs)
scaffold0210 (44-267)||(21604-21826)
scaffold0210 (44-267)||(29496-29718)
[»] scaffold0358 (2 HSPs)
scaffold0358 (4-151)||(4769-4919)
scaffold0358 (21-151)||(13-143)
[»] scaffold0029 (1 HSPs)
scaffold0029 (44-267)||(12857-13079)
[»] scaffold0139 (1 HSPs)
scaffold0139 (81-267)||(20117-20304)
[»] chr3 (28 HSPs)
chr3 (44-267)||(856234-856456)
chr3 (1-151)||(20698349-20698502)
chr3 (137-266)||(17524951-17525080)
chr3 (3-151)||(13442330-13442482)
chr3 (82-198)||(14179570-14179687)
chr3 (94-267)||(23408581-23408753)
chr3 (1-151)||(12399263-12399417)
chr3 (1-151)||(17487910-17488064)
chr3 (166-267)||(15877626-15877727)
chr3 (1-151)||(14972908-14973062)
chr3 (1-151)||(17499392-17499546)
chr3 (1-151)||(14576746-14576899)
chr3 (1-151)||(18438588-18438742)
chr3 (2-151)||(24153122-24153274)
chr3 (137-267)||(23077276-23077406)
chr3 (138-267)||(15051707-15051836)
chr3 (138-267)||(16909941-16910070)
chr3 (4-151)||(26686944-26687095)
chr3 (4-151)||(43840989-43841140)
chr3 (1-150)||(25476299-25476452)
chr3 (138-267)||(14878303-14878433)
chr3 (2-150)||(23083275-23083427)
chr3 (138-267)||(15060483-15060612)
chr3 (1-151)||(42386464-42386619)
chr3 (21-151)||(40213634-40213765)
chr3 (137-194)||(11862981-11863038)
chr3 (82-151)||(16796685-16796755)
chr3 (231-267)||(16369692-16369728)
[»] scaffold0297 (1 HSPs)
scaffold0297 (137-267)||(15467-15597)
[»] scaffold0004 (1 HSPs)
scaffold0004 (81-267)||(69930-70117)
[»] scaffold0101 (1 HSPs)
scaffold0101 (137-267)||(8755-8885)
[»] scaffold0403 (1 HSPs)
scaffold0403 (1-151)||(4903-5057)
[»] scaffold0193 (1 HSPs)
scaffold0193 (1-151)||(13265-13419)
[»] scaffold0292 (2 HSPs)
scaffold0292 (2-151)||(3525-3678)
scaffold0292 (5-144)||(401-543)
[»] scaffold0261 (1 HSPs)
scaffold0261 (156-267)||(1550-1661)
[»] scaffold0174 (1 HSPs)
scaffold0174 (137-267)||(18251-18381)
[»] scaffold0043 (1 HSPs)
scaffold0043 (137-267)||(18431-18561)
[»] scaffold1842 (1 HSPs)
scaffold1842 (4-164)||(949-1112)
[»] scaffold0011 (2 HSPs)
scaffold0011 (4-164)||(167879-168042)
scaffold0011 (1-151)||(51967-52121)
[»] scaffold0309 (1 HSPs)
scaffold0309 (6-159)||(6669-6826)
[»] scaffold0031 (2 HSPs)
scaffold0031 (156-267)||(65591-65702)
scaffold0031 (21-65)||(128827-128871)
[»] scaffold0102 (1 HSPs)
scaffold0102 (137-267)||(48258-48388)
[»] scaffold0490 (1 HSPs)
scaffold0490 (1-151)||(2006-2160)
[»] scaffold0023 (2 HSPs)
scaffold0023 (137-261)||(38283-38407)
scaffold0023 (137-267)||(23465-23594)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-151)||(1905-2059)
[»] scaffold0042 (2 HSPs)
scaffold0042 (1-151)||(24214-24370)
scaffold0042 (137-267)||(34708-34838)
[»] scaffold0555 (1 HSPs)
scaffold0555 (137-267)||(773-903)
[»] scaffold0149 (2 HSPs)
scaffold0149 (137-267)||(3933-4062)
scaffold0149 (137-267)||(8364-8493)
[»] scaffold0145 (2 HSPs)
scaffold0145 (2-151)||(32997-33149)
scaffold0145 (2-151)||(38816-38968)
[»] scaffold1895 (1 HSPs)
scaffold1895 (137-261)||(1031-1155)
[»] scaffold0647 (1 HSPs)
scaffold0647 (4-146)||(6039-6185)
[»] scaffold0096 (1 HSPs)
scaffold0096 (84-267)||(16147-16330)
[»] scaffold0081 (3 HSPs)
scaffold0081 (137-267)||(14863-14993)
scaffold0081 (137-267)||(23878-24008)
scaffold0081 (137-267)||(39302-39432)
[»] scaffold0231 (1 HSPs)
scaffold0231 (21-159)||(22959-23098)
[»] scaffold0141 (1 HSPs)
scaffold0141 (4-151)||(39534-39684)
[»] scaffold0049 (1 HSPs)
scaffold0049 (4-151)||(75128-75278)
[»] scaffold0540 (1 HSPs)
scaffold0540 (1-147)||(3068-3217)
[»] scaffold0088 (1 HSPs)
scaffold0088 (1-164)||(20965-21132)
[»] scaffold0908 (1 HSPs)
scaffold0908 (1-147)||(3103-3253)
[»] scaffold0671 (1 HSPs)
scaffold0671 (137-265)||(6294-6422)
[»] scaffold0198 (1 HSPs)
scaffold0198 (96-196)||(23995-24094)
[»] scaffold0122 (2 HSPs)
scaffold0122 (1-151)||(25978-26132)
scaffold0122 (1-63)||(44709-44774)
[»] scaffold0035 (1 HSPs)
scaffold0035 (137-265)||(46527-46655)
[»] scaffold0228 (3 HSPs)
scaffold0228 (21-151)||(4584-4715)
scaffold0228 (21-151)||(12166-12297)
scaffold0228 (21-151)||(22118-22249)
[»] scaffold0003 (2 HSPs)
scaffold0003 (4-151)||(339863-340012)
scaffold0003 (1-64)||(71355-71419)
[»] scaffold0311 (1 HSPs)
scaffold0311 (137-267)||(6876-7006)
[»] scaffold0121 (1 HSPs)
scaffold0121 (1-151)||(8446-8599)
[»] scaffold0111 (1 HSPs)
scaffold0111 (137-267)||(32626-32755)
[»] scaffold0080 (2 HSPs)
scaffold0080 (137-267)||(18454-18584)
scaffold0080 (2-151)||(39968-40120)
[»] scaffold0175 (1 HSPs)
scaffold0175 (1-164)||(13146-13313)
[»] scaffold0324 (1 HSPs)
scaffold0324 (187-267)||(15642-15722)
[»] scaffold0056 (2 HSPs)
scaffold0056 (1-151)||(17128-17284)
scaffold0056 (137-267)||(13875-14005)
[»] scaffold0026 (2 HSPs)
scaffold0026 (2-151)||(25951-26103)
scaffold0026 (2-151)||(39913-40065)
[»] scaffold0130 (1 HSPs)
scaffold0130 (25-147)||(27911-28034)
[»] scaffold0484 (1 HSPs)
scaffold0484 (82-151)||(1052-1122)
[»] scaffold0412 (1 HSPs)
scaffold0412 (137-267)||(6214-6344)
[»] scaffold0327 (1 HSPs)
scaffold0327 (21-134)||(3460-3574)
[»] scaffold1296 (1 HSPs)
scaffold1296 (138-267)||(582-711)
[»] scaffold0217 (1 HSPs)
scaffold0217 (1-148)||(16516-16667)
[»] scaffold0107 (1 HSPs)
scaffold0107 (4-64)||(15417-15478)
[»] scaffold0425 (1 HSPs)
scaffold0425 (137-265)||(348-476)
[»] scaffold0120 (2 HSPs)
scaffold0120 (1-121)||(32901-33023)
scaffold0120 (1-121)||(45982-46104)
[»] scaffold0615 (1 HSPs)
scaffold0615 (161-267)||(1882-1988)
[»] scaffold0220 (1 HSPs)
scaffold0220 (137-267)||(4731-4861)
[»] scaffold0158 (2 HSPs)
scaffold0158 (137-267)||(3030-3160)
scaffold0158 (137-267)||(6696-6826)
[»] scaffold0037 (1 HSPs)
scaffold0037 (137-267)||(21367-21497)
[»] scaffold0395 (1 HSPs)
scaffold0395 (6-146)||(881-1021)
[»] scaffold0046 (1 HSPs)
scaffold0046 (4-66)||(28471-28536)
[»] scaffold0235 (1 HSPs)
scaffold0235 (4-61)||(11447-11507)
[»] scaffold0761 (1 HSPs)
scaffold0761 (138-267)||(6107-6236)
[»] scaffold0413 (1 HSPs)
scaffold0413 (1-63)||(12623-12687)
[»] scaffold0165 (2 HSPs)
scaffold0165 (110-151)||(3648-3689)
scaffold0165 (110-151)||(7712-7753)
[»] scaffold1326 (1 HSPs)
scaffold1326 (231-267)||(1288-1324)


Alignment Details
Target: chr8 (Bit Score: 216; Significance: 1e-119; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 4 - 267
Target Start/End: Complemental strand, 21396043 - 21395780
Alignment:
Q  4 caacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattat 103  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  21396043 caacataggcagtatacaacagcatgagataattatatcaaattcaattcatcaacatcttatgtatacaaacattcttcaagtaatgcataaacattat 21395944  T
Q  104 aacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaac 203  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| || |    
T  21395943 aacacttcataatcaataacaacatatcttattcagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctctaatc 21395844  T
Q  204 aaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggcg 267  Q
    ||||||||||||||| ||| ||||||||||||||||||| |||||| || ||||||||||||||    
T  21395843 aaatcatgcgacacagatcgcattttcctcacttgcactcagttctggacgtgctcgcgaggcg 21395780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 4 - 267
Target Start/End: Complemental strand, 21790536 - 21790273
Alignment:
Q  4 caacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattat 103  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  21790536 caacataggcagtatacaacagcatgagataattatatcaaattcaattcatcaacatcttatgtatacaaacattcttcaagtaatgcataaacattat 21790437  T
Q  104 aacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaac 203  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| || |    
T  21790436 aacacttcataatcaataacaacatatcttattcagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctctaatc 21790337  T
Q  204 aaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggcg 267  Q
    ||||||||||||||| ||| ||||||||||||||||||| |||||| || ||||||||||||||    
T  21790336 aaatcatgcgacacagatcgcattttcctcacttgcactcagttctggacgtgctcgcgaggcg 21790273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 4 - 263
Target Start/End: Complemental strand, 21389513 - 21389254
Alignment:
Q  4 caacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattat 103  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  21389513 caacataggtagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgtatacaaacattcttcaagtaatgcataaacattat 21389414  T
Q  104 aacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaac 203  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||| |||||||||| |||||||||||||||||| || |    
T  21389413 aacacttcataatcaacaacaacatatcttattcagcttcacatattacaattaacttcatatattggtctcattactacccaagggtccatctctaatc 21389314  T
Q  204 aaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcga 263  Q
    ||||||||||||||| ||| ||||||||||||||||||| |||||| |||||||||||||    
T  21389313 aaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcga 21389254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 4 - 146
Target Start/End: Complemental strand, 21778839 - 21778697
Alignment:
Q  4 caacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattat 103  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  21778839 caacataggtagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgtatacaaacattcttcaagtaatgcataaacattat 21778740  T
Q  104 aacacttcataatcaacaacaacatatcttattcagcttcaca 146  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  21778739 aacacttcataatcaacaacaacatatcttattcagcttcaca 21778697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 31971311 - 31971463
Alignment:
Q  1 cagcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaac 98  Q
    ||||||||||||||||||||||  || ||||||||||| ||||||| | |||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  31971311 cagcaacataggcagtatacaaaacaacatgacataataatatcaattccaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataaac 31971410  T
Q  99 attataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||| ||| |||||||||||||||||||||||||| || ||||||||||||    
T  31971411 attatatcacatcataatcaacaacaacatatcttatacatcttcacagatta 31971463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 16199710 - 16199559
Alignment:
Q  1 cagcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaaca 99  Q
    ||||||||||| |||||| ||| || ||||||||||| ||||||| ||||||||||| |||||||| | ||||||| |||||||||||||||||||||||    
T  16199710 cagcaacatagacagtattcaaacaacatgacataataatatcaatttcaattcatctacatcttaggtatacaaatattcttcaagtaatgcataaaca 16199611  T
Q  100 ttataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||  || |||||||||||||||||||||||||| |||||||||||||||    
T  16199610 ttatattacatcataatcaacaacaacatatcttatacagcttcacagatta 16199559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 45131063 - 45130911
Alignment:
Q  1 cagcaacataggcagtatacaa-cagcatgacataattatatcaaattcaa-ttcatcaacatcttatgcatacaaacattcttcaagtaatgcataaac 98  Q
    ||||||||||||||||| |||| |||||||||||||| ||||||| ||||| ||||||||||||||| | ||||||  ||||||||||||||||||||||    
T  45131063 cagcaacataggcagtaaacaaacagcatgacataataatatcaatttcaaattcatcaacatcttaggtatacaattattcttcaagtaatgcataaac 45130964  T
Q  99 attataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||| ||| ||||||||| |||||||| ||||||| |||||||||||||||    
T  45130963 attatatcacatcataatcatcaacaacaaatcttatacagcttcacagatta 45130911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 137 - 267
Target Start/End: Complemental strand, 17353865 - 17353735
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| || | ||| |||||||||||||| || | ||||||||    
T  17353865 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctctaatcgaattatgcgacacaaatcgcaatatcctcact 17353766  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||||| ||||||  ||||||||||||||||    
T  17353765 tgcactcagttctgcaagtgctcgcgaggcg 17353735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 137 - 267
Target Start/End: Original strand, 19899286 - 19899416
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||  |||||||||| ||||||| ||||| |||||||||||||||||| || ||||| |||||||||| ||| ||   ||||||||    
T  19899286 cagcttcacagattgcagttaacttcttaaataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaacatcctcact 19899385  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||||| |||||| |||||||||||||||||    
T  19899386 tgcactcagttctggaagtgctcgcgaggcg 19899416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 21919067 - 21918915
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa-cattcttcaagtaatgcataa 96  Q
    ||||||||||||||||||||||   |||||||||||||| ||||||| | ||||||| ||||||||||   || ||||  ||||||||||||||||||||    
T  21919067 cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcaacaacatcttaaatattcaaataattcttcaagtaatgcataa 21918968  T
Q  97 acattataacacttcataatcaacaacaacatatcttattcagcttcacagat 149  Q
    |||||||| ||| ||||||||| || ||||| ||||||  |||||||||||||    
T  21918967 acattatatcacatcataatcagcagcaacacatcttaaacagcttcacagat 21918915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 151
Target Start/End: Original strand, 20536266 - 20536416
Alignment:
Q  5 aacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacat 100  Q
    ||||||||||||||||||   |||||||||||||| ||||||| | ||||||||||||||||||   || |||| ||||||||||||||||| | |||||    
T  20536266 aacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgcacataacat 20536365  T
Q  101 tataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||| ||| |||||||| ||| ||||| ||||||  || ||||||||||||    
T  20536366 tatatcacatcataatcgacatcaacacatcttaaacaacttcacagatta 20536416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 18879298 - 18879150
Alignment:
Q  1 cagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aaca 99  Q
    |||||||||||||||||||||| | ||  ||||||| ||||||| | ||||||||||||||||||   || |||| ||||||||||||||||  | ||||    
T  18879298 cagcaacataggcagtatacaaaaaca--acataataatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgctcataaca 18879201  T
Q  100 ttataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    ||||| ||| |||||||||||| || || |||||| ||||||||||||||||    
T  18879200 ttatatcacatcataatcaacatcagcacatctta-tcagcttcacagatta 18879150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 267
Target Start/End: Original strand, 24755912 - 24756042
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||  |||| || |||||||||| ||||| |||||||||||||||||| |||||| | ||||||||||  || ||   | ||||||    
T  24755912 cagcttcacagattgcagttaacatcctatataggtcacattactacccaagggtccatctctaaacaagttatgcgacacaggtcgcaaagttctcact 24756011  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||||| |||||| |||||||||||||||||    
T  24756012 tgcactcagttctggaagtgctcgcgaggcg 24756042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 94 - 267
Target Start/End: Original strand, 16184877 - 16185049
Alignment:
Q  94 taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattacccaagggtcc 193  Q
    ||||||||| | ||| | ||||||||||  ||||| || ||| |||||||||||||| ||  |||| ||||||||||||| ||||| |||||| ||||||    
T  16184877 taaacattaaatcacattataatcaacattaacatctcatat-cagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtcc 16184975  T
Q  194 atctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggcg 267  Q
    ||||| || ||||| ||||||||||  || ||   |||| ||||||| | |||||| |||||||||||||||||    
T  16184976 atctctaatcaaattatgcgacacaggtcgcaacatcctaacttgcattcagttctggaagtgctcgcgaggcg 16185049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 2 - 151
Target Start/End: Complemental strand, 28649110 - 28648957
Alignment:
Q  2 agcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aa 97  Q
    |||||||||||||||||||   |||||||||||||||| ||||||||| ||| ||| ||||||||||   |||||  |||  |||||||||||  || ||    
T  28649110 agcaacataggcagtatacgaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaattatacattcataattcaagtaatgtgtataa 28649011  T
Q  98 cattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    ||||||| ||| |||||||||||| ||||| ||||||  |||||||||| ||||    
T  28649010 cattatatcacatcataatcaacatcaacacatcttaaacagcttcacatatta 28648957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 137 - 267
Target Start/End: Original strand, 19983284 - 19983414
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||  |||||||||| ||||||| ||||| |||||| || |||||||| || ||||| |||||||||| ||| ||   |||||| |    
T  19983284 cagcttcacagattgcagttaacttcttaaataggtcacattactacccagggttccatctctaatcaaattatgcgacacagatcgcaacatcctcatt 19983383  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||||| |||| | |||||||||||||||||    
T  19983384 tgcactcagttttggaagtgctcgcgaggcg 19983414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 156 - 267
Target Start/End: Original strand, 19976655 - 19976766
Alignment:
Q  156 taacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagt 255  Q
    |||||||||| ||||||| ||||| |||| | || |||||||| || ||||| |||||||||| ||| ||   |||||||||||||| |||||| |||||    
T  19976655 taacttcttaaataggtcacattactacctagggttccatctctaatcaaattatgcgacacagatcgcaacatcctcacttgcactcagttctggaagt 19976754  T
Q  256 gctcgcgaggcg 267  Q
    ||||||||||||    
T  19976755 gctcgcgaggcg 19976766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 137 - 267
Target Start/End: Complemental strand, 21161986 - 21161856
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||  ||||||||| |||||||   |||| ||||||| |||||||||| || ||||  || ||||||| ||| ||   ||||||||    
T  21161986 cagcttcacagattgcagttaacttcttgtataggttatattactacccaaaggtccatctctaatcaaactatacgacacagatcgcaacatcctcact 21161887  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||||| |||||| |||||||||||||||||    
T  21161886 tgcactcagttctggaagtgctcgcgaggcg 21161856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 22626790 - 22626943
Alignment:
Q  1 cagcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aa 97  Q
    ||||||||||||||||||||||  || ||||||||||| ||||||||| ||| ||| ||||||||||   || |||  || ||||||||||||  || ||    
T  22626790 cagcaacataggcagtatacaaaacaacatgacataataatatcaaatacaaatcaacaacatcttaaatattcaattatacttcaagtaatgtgtataa 22626889  T
Q  98 cattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    ||||||| ||| |||| |||| || ||||| ||||||  |||||||||||||||    
T  22626890 cattatatcacatcattatcatcatcaacacatcttaaacagcttcacagatta 22626943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 84 - 267
Target Start/End: Complemental strand, 23776816 - 23776632
Alignment:
Q  84 aagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattatta 182  Q
    |||||||||| | |||||||||  || ||||| |||||| |||||| || ||  |||||||||| ||| ||  |||||||||||||||||| ||||| ||    
T  23776816 aagtaatgcacataacattatataacatcatattcaacatcaacatttcataa-cagcttcacaaattgcagttaacttcttatataggtcacattacta 23776718  T
Q  183 cccaagggtccatctccaaacaaatcatgcgacaca-aatcacattttcctcacttgcactaagttctagaagtgctcgcgaggcg 267  Q
    || ||| ||||||||| || ||||| |||||||||| | || || | ||||  |||||||| ||||||  ||||||||||||||||    
T  23776717 cctaagtgtccatctctaaccaaattatgcgacacagattcgcaatatcctagcttgcactcagttctgaaagtgctcgcgaggcg 23776632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 18818476 - 18818322
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-a 96  Q
    ||||||||||||||||||||||   |||||||||||||| ||||||| |  || ||| || |||||||   || |||  || |||||||||||||| | |    
T  18818476 cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgtaagtcaacatcatcttaaatattcaattatacttcaagtaatgcacata 18818377  T
Q  97 acattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||||| |||  ||||||||||| ||||| ||||||  |||||||||||||||    
T  18818376 acattatatcacaacataatcaacatcaacacatcttaaacagcttcacagatta 18818322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 22875119 - 22875273
Alignment:
Q  1 cagcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aa 97  Q
    |||||||| |||||||||||||  || ||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |||  |||||||||||| || ||    
T  22875119 cagcaacacaggcagtatacaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcataattcaagtaatgcgtataa 22875218  T
Q  98 cattataacacttcataatcaacaacaacatatctt-attcagcttcacagatta 151  Q
    ||||||| ||| |||||||||||| ||||| ||||| |  |||||||||||||||    
T  22875219 cattatatcacatcataatcaacatcaacacatcttaaaacagcttcacagatta 22875273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 151
Target Start/End: Complemental strand, 25363123 - 25363053
Alignment:
Q  82 tcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||||||||||||| ||||||| ||| |||||||||||||||||| ||||||  |||||||||||||||    
T  25363123 tcaagtaatgcataaaacattataccacatcataatcaacaacaacacatcttaaacagcttcacagatta 25363053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 16092409 - 16092272
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-a 96  Q
    |||||||| |||||||||||||   |||||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |||  || ||||||||| || |    
T  16092409 cagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcataatttaagtaatgcgtata 16092310  T
Q  97 acattataacacttcataatcaacaacaacatatctta 134  Q
    |||||||| ||| |||||||||||| ||||| ||||||    
T  16092309 acattatatcacatcataatcaacatcaacacatctta 16092272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 267
Target Start/End: Complemental strand, 20465967 - 20465837
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||  |||| ||||||||||||| ||||| |||| |||||||| || | || ||| ||| || ||||| | |||    | ||||||    
T  20465967 cagcttcacagattgcagttaacctcttatataggtcacattactacctaagggtccgtccctaatcaattcaagcaacacagaacacgacattctcact 20465868  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||||| |||||| |||||||||||||||||    
T  20465867 tgcactcagttctggaagtgctcgcgaggcg 20465837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 267
Target Start/End: Complemental strand, 21168649 - 21168519
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||  ||||||||| |||||||   |||| ||||||| |||||||||| || ||||  |||||||||| ||| ||   ||||||||    
T  21168649 cagcttcacagattgcagttaacttcttgtataggttatattactacccaaaggtccatctctaatcaaactatgcgacacagatcgcaacatcctcact 21168550  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||||| || ||  |||||||| ||||||||    
T  21168549 tgcactcagatcaggaagtgcttgcgaggcg 21168519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 264
Target Start/End: Original strand, 377469 - 377596
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||  |||| ||||||||||||| ||||| |||| ||||||||||| | || ||| ||| || ||||| |||||    | |||| |    
T  377469 cagcttcacagattgcagttaacatcttatataggtcacattactacctaagggtccatccctaatcaattcaagcaacacagatcacgacattctcatt 377568  T
Q  237 tgcactaagttctagaagtgctcgcgag 264  Q
     ||||| |||||| ||||||||||||||    
T  377569 agcactcagttctggaagtgctcgcgag 377596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 7372832 - 7372978
Alignment:
Q  1 cagcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaa 97  Q
    ||||||||||||||||||||   |||||||||||||||| ||||||| | ||| ||| || |||||||   || |||  || |||||||||||||         
T  7372832 cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaattatacttcaagtaatgc----- 7372926  T
Q  98 cattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
      ||||| |||  ||||||||||| ||||| ||||||  |||||||||||||||    
T  7372927 --ttatatcacaacataatcaacatcaacacatcttaaacagcttcacagatta 7372978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 151
Target Start/End: Original strand, 23648628 - 23648761
Alignment:
Q  19 acaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattataacacttcataatc 117  Q
    |||||| ||||||||||| ||||||  | |||| || ||||||||||   || |||  |  |||||||||||||| | ||||||||| ||| ||||||||    
T  23648628 acaacaacatgacataataatatcatttgcaatacaacaacatcttaaatattcaataaaacttcaagtaatgcacacaacattatatcacatcataatc 23648727  T
Q  118 aacaacaacatatcttattcagcttcacagatta 151  Q
    |||| ||||| ||||||  |||||| ||||||||    
T  23648728 aacatcaacacatcttaaacagcttaacagatta 23648761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 21923995 - 21923841
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-a 96  Q
    |||||||||||||||| |||||   || |||||||| || ||||||| | ||| ||| ||||||||||   || |||  || |||||||||||||| | |    
T  21923995 cagcaacataggcagtctacaaaaacaacatgacatgataatatcaattgcaagtcaacaacatcttaaatattcaattatacttcaagtaatgcacata 21923896  T
Q  97 acattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    || ||||    | |||||||||||||||||| ||||||  |||||||||||||||    
T  21923895 accttattttgcatcataatcaacaacaacacatcttaaacagcttcacagatta 21923841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 194
Target Start/End: Complemental strand, 17926635 - 17926578
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtcca 194  Q
    |||||||||||||| ||| |||| ||||| ||||||| ||||| |||| |||||||||    
T  17926635 cagcttcacagatttcaattaacatcttaaataggtcacattactacctaagggtcca 17926578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 139; Significance: 8e-73; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 16337 - 16487
Alignment:
Q  1 cagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  16337 cagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatattatgtatacaaacattcttcaagtaatgcataaacat 16436  T
Q  101 tataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  16437 tataacacatcataatcaacaacaacatatcttattcagcttcacagatta 16487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 138; Significance: 3e-72; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 2 - 151
Target Start/End: Original strand, 20309164 - 20309313
Alignment:
Q  2 agcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacatt 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  20309164 agcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataaacatt 20309263  T
Q  102 ataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  20309264 ataacacatcataatcaacaacaacatatcttattcagcttcacagatta 20309313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 32 - 267
Target Start/End: Complemental strand, 40622244 - 40622006
Alignment:
Q  32 ataattatatcaaattcaattcatcaacatcttatgcataca-----aacattcttcaagtaatgcataaacattataacacttcataatcaacaacaac 126  Q
    ||||||||||||| |||||||||||||||||||||| |||||     || ||||||||||||||||||||||||||||| || ||||||||||||  |||    
T  40622244 ataattatatcaa-ttcaattcatcaacatcttatgtatacagtacaaatattcttcaagtaatgcataaacattataatacatcataatcaacacaaac 40622146  T
Q  127 atatcttattcagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacat 226  Q
    || || ||  |||||||||||||| ||  |||||||||||||||||||||||| |||||||||||||||||| |||||||  |||||| ||| ||| ||     
T  40622145 atctcataa-cagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatctctaaacaaaatatgcgaaacagatcgcaa 40622047  T
Q  227 tttcctcacttgcactaagttctagaagtgctcgcgaggcg 267  Q
    | |||||||||||||| |||||| |||||||||||||||||    
T  40622046 tatcctcacttgcactcagttctggaagtgctcgcgaggcg 40622006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 38181 - 38029
Alignment:
Q  1 cagcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaac 98  Q
    ||||||||||||||||||||||  |||||||||||||| ||||||| ||| |||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  38181 cagcaacataggcagtatacaaaacagcatgacataataatatcaatttcgattcatcatcatcttatgtatacaaacattcttcaagtaatgcataaac 38082  T
Q  99 attataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||| ||| ||||||||||||||||||| |||||| |||||||| ||||||    
T  38081 attatatcacatcataatcaacaacaacatgtcttatacagcttcagagatta 38029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 138 - 267
Target Start/End: Original strand, 23038227 - 23038356
Alignment:
Q  138 agcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcactt 237  Q
    ||||||||||||| || |||||||||||||||||||||| || |||||||||||||||||| || |||||||||||||||| ||| || |||||||||||    
T  23038227 agcttcacagattgcagataacttcttatataggtctcaatactacccaagggtccatctctaatcaaatcatgcgacacagatcgcaatttcctcactt 23038326  T
Q  238 gcactaagttctagaagtgctcgcgaggcg 267  Q
    ||||| |||||| ||||||||| |||||||    
T  23038327 gcactcagttctggaagtgctcacgaggcg 23038356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 23103462 - 23103254
Alignment:
Q  1 cagcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgca--taaa 97  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |  ||| ||  |||  ||||||| |||||  ||||    
T  23103462 cagcaacataggcagtatacaaacagcatgacatgattatatcaaattcaattcatcaacatctcaatcattcattcataattcaagtcatgcaattaaa 23103363  T
Q  98 cattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatct 197  Q
    ||||||| ||| ||| |  |||||  ||||| || ||  |||||||||||||| ||  |||||||||||||||||||||||| |||| ||||||||||||    
T  23103362 cattatatcacatcaaatccaacactaacatctcata-acagcttcacagattgcagttaacttcttatataggtctcattactaccaaagggtccatct 23103264  T
Q  198 ccaaacaaat 207  Q
    | || |||||    
T  23103263 ctaatcaaat 23103254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 81 - 267
Target Start/End: Complemental strand, 22740945 - 22740758
Alignment:
Q  81 ttcaagtaatgca--taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcatt 178  Q
    |||||||||||||  ||| ||||||| ||| ||||| ||||||  ||||| || ||  || ||||| ||||| ||  |||||||||||||||||||||||    
T  22740945 ttcaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataa-caacttcaaagattgcagttaacttcttatataggtctcatt 22740847  T
Q  179 attacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggcg 267  Q
    | |||||||||||||||||| || ||||| |||||||||| ||| || | |||||||||||||| |||||| |||||||||||||||||    
T  22740846 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcg 22740758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 23285919 - 23286082
Alignment:
Q  1 cagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaa-ca 99  Q
    |||||||||||||||||||||| | || |||||||| ||||||| | ||||||||||||||||||   || ||||  |||||||||||||||||||| ||    
T  23285919 cagcaacataggcagtatacaaaaaca-gacataataatatcaattgcaattcatcaacatcttaaatattcaaatgttcttcaagtaatgcataaaaca 23286017  T
Q  100 ttataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 164  Q
    ||||| ||| |||||||||||||||||| ||||||  ||||||||||||||| || |||| ||||    
T  23286018 ttatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacatctt 23286082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 81 - 267
Target Start/End: Complemental strand, 22758700 - 22758513
Alignment:
Q  81 ttcaagtaatgca--taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcatt 178  Q
    |||||||||||||  ||| ||||||| ||| ||||| ||||||  ||||| || ||  |||||||| ||||| ||  ||| |||||||||||||||||||    
T  22758700 ttcaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataa-cagcttcatagattgcagttaatttcttatataggtctcatt 22758602  T
Q  179 attacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggcg 267  Q
    | |||||||||||||||||| || ||||| |||||||||| ||| || | |||||||||||||| ||||||  |||||||| |||||||    
T  22758601 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcg 22758513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 267
Target Start/End: Complemental strand, 23019633 - 23019504
Alignment:
Q  138 agcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcactt 237  Q
    ||||||||| ||| |||||||||||||||||||||| ||||| |||||||||||||| ||| ||  |||| |||||||||| ||| || | |||| ||||    
T  23019633 agcttcacaaattgcaaataacttcttatataggtcacattactacccaagggtccaactctaattaaattatgcgacacagatcgcaatatcctgactt 23019534  T
Q  238 gcactaagttctagaagtgctcgcgaggcg 267  Q
    ||||| |||||| |||||||||||||||||    
T  23019533 gcactcagttctggaagtgctcgcgaggcg 23019504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 22731301 - 22731147
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-a 96  Q
    |||||||||||||||| |||||   |||||||||||||| ||||||| | |||||||||||||| |||   || |||| ||||||||||||||||| | |    
T  22731301 cagcaacataggcagtttacaaaaacagcatgacataataatatcaattgcaattcatcaacatattaaatattcaaatattcttcaagtaatgcacata 22731202  T
Q  97 acattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  22731201 acattatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 22731147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 21 - 151
Target Start/End: Complemental strand, 22738224 - 22738093
Alignment:
Q  21 aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattataacacttcataatcaa 119  Q
    |||||||||||||||| ||||||| | ||||||||||||||||||   || |||| ||||||||||||||||| | ||||||||| ||| ||||||||||    
T  22738224 aacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgcacataacattatatcacatcataatcaa 22738125  T
Q  120 caacaacatatcttattcagcttcacagatta 151  Q
    || ||||| ||||||  |||||||||||||||    
T  22738124 catcaacacatcttaaacagcttcacagatta 22738093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 96 - 267
Target Start/End: Complemental strand, 22799094 - 22798924
Alignment:
Q  96 aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccat 195  Q
    ||||||||| ||| ||||| ||||||  ||||| || ||  |||||||||| ||| ||  |||||||||||||||||| ||||| |||||| ||||||||    
T  22799094 aacattatatcacatcatattcaacattaacatttcataa-cagcttcacaaattgcagttaacttcttatataggtcacattactacccaggggtccat 22798996  T
Q  196 ctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggcg 267  Q
    ||| || ||||| |||||||||| ||| || | |||| ||||||||| |||||| |||||||||||||||||    
T  22798995 ctctaatcaaattatgcgacacagatcgcaatatcctaacttgcacttagttctggaagtgctcgcgaggcg 22798924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 298881 - 298727
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcat-aa 96  Q
    ||||||||||||||||||||||   ||||||||||||| |||||||| | ||||||| ||||||||||   || |||| | |  ||||||||||||| ||    
T  298881 cagcaacataggcagtatacaaaatcagcatgacataaatatatcaattgcaattcaacaacatcttaaatattcaaataattctcaagtaatgcataaa 298782  T
Q  97 acattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||||| ||| ||||||| || ||||||| ||||||| |||||||||| ||||    
T  298781 acattatatcacatcataattaataacaacacatcttatacagcttcacatatta 298727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 26 - 164
Target Start/End: Complemental strand, 23654425 - 23654286
Alignment:
Q  26 catgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaa-cattataacacttcataatcaacaaca 124  Q
    ||||||||||| ||||||| | ||||||||||||||||||   || |||  |||  |||||||||||||||| ||||||| ||| ||||||| |||||||    
T  23654425 catgacataataatatcaattgcaattcatcaacatcttaaatattcaagtattactcaagtaatgcataaaacattatatcacatcataattaacaaca 23654326  T
Q  125 acatatcttattcagcttcacagattacaaataacttctt 164  Q
    ||| ||||||  ||||||||||||||| || |||| ||||    
T  23654325 acacatcttaaacagcttcacagattataattaacctctt 23654286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 23076496 - 23076650
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-a 96  Q
    ||||||||||||||||||||||   |||||||||||||| ||||||| | ||| ||| ||| ||||||   || |||  || |||||||||||||| | |    
T  23076496 cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacaatatcttaaatattcaattatacttcaagtaatgcacata 23076595  T
Q  97 acattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||||| ||| |||||||||||| ||||| | ||||  |||||||||||||||    
T  23076596 acattatatcacatcataatcaacatcaacacagcttaaacagcttcacagatta 23076650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 23660077 - 23660230
Alignment:
Q  1 cagcaacataggcagtatac--aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aa 97  Q
    ||||||||||||||||||||  ||||| |||||||||| ||||||||| ||| ||| ||||||||||   || ||| |||   ||||||||||| || ||    
T  23660077 cagcaacataggcagtatacgaaacaggatgacataataatatcaaatgcaaatcaacaacatcttaaatattcaatcataactcaagtaatgcgtataa 23660176  T
Q  98 cattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    ||||||| ||| |||||||||||| ||||| ||||||  |||||| ||| ||||    
T  23660177 cattatatcacatcataatcaacatcaacacatcttaaacagctttacaaatta 23660230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 23060567 - 23060716
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-a 96  Q
    ||||||||||||||||||||||   || ||||||||||| ||||||| | ||| ||| ||||||||||   ||  ||  || |||||||||||||| | |    
T  23060567 cagcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtcaacaacatcttaaatattaaattatacttcaagtaatgcacata 23060666  T
Q  97 acattataacacttcataatcaacaacaacatatcttattcagcttcaca 146  Q
    |||||||| ||| |||||||||||| ||||| ||||||  ||||||||||    
T  23060667 acattatatcacatcataatcaacatcaacacatcttaaacagcttcaca 23060716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 142 - 267
Target Start/End: Complemental strand, 45678078 - 45677953
Alignment:
Q  142 tcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcac 241  Q
    ||||||||| ||| |||| || |||||||||| ||||| |||| ||| ||||||| | || ||| |||||||||||| ||||||   | |||| ||||||    
T  45678078 tcacagattgcaattaacatcctatataggtcacattactacctaagagtccatccctaatcaactcatgcgacacagatcacaacattctcaattgcac 45677979  T
Q  242 taagttctagaagtgctcgcgaggcg 267  Q
    | |||||| ||||||||| |||||||    
T  45677978 tcagttctggaagtgctcacgaggcg 45677953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 151
Target Start/End: Original strand, 22337192 - 22337323
Alignment:
Q  21 aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattataacacttcataatcaa 119  Q
    |||||||||||||||| ||||||||| |||  || |||||||| |   |||||  |||  |||||||||||| || ||||||||| ||| ||||||||||    
T  22337192 aacagcatgacataataatatcaaatgcaagacaacaacatctcaaatatacattcataattcaagtaatgcgtataacattatatcacatcataatcaa 22337291  T
Q  120 caacaacatatcttattcagcttcacagatta 151  Q
    || ||||||||||||  || ||||||| ||||    
T  22337292 catcaacatatcttaaacaacttcacaaatta 22337323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 267
Target Start/End: Complemental strand, 23101093 - 23101028
Alignment:
Q  202 acaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggcg 267  Q
    ||||||||||||||| | ||| |||| |||||||||||||| |||| | |||||||||||||||||    
T  23101093 acaaatcatgcgacatagatcgcattatcctcacttgcactcagttttggaagtgctcgcgaggcg 23101028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 194
Target Start/End: Complemental strand, 25963645 - 25963588
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtcca 194  Q
    |||||||||||||| ||| |||| ||||| ||||||| ||||| |||| |||||||||    
T  25963645 cagcttcacagatttcaattaacatcttaaataggtcacattactacctaagggtcca 25963588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 135; Significance: 2e-70; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 1344 - 1494
Alignment:
Q  1 cagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacat 100  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1344 cagcaacataggcagtgtacaacatcatgacataattatatcaaattcaattcatcaacatcttatgtatacaaacattcttcaagtaatgcataaacat 1443  T
Q  101 tataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1444 tataacacttcataatcaacaacaacatatcttattcagcttcatagatta 1494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 4 - 151
Target Start/End: Original strand, 7324 - 7471
Alignment:
Q  4 caacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattat 103  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  7324 caacataggcagtatacaacaacatgaaataattatatcaaattcaattcatcaacatcttatgtatacaaacattcttcaagtaatgcataaacattat 7423  T
Q  104 aacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7424 aacacttcataatcaacaacaacatatcttattcagcttcatagatta 7471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 131; Significance: 5e-68; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 27847896 - 27847746
Alignment:
Q  1 cagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacat 100  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  27847896 cagcaacataggcagtgtacaacagtatgacataattatatcaaattcaattcatcaacatcttatgtatacaaacattcttcaagtaatgcataaacat 27847797  T
Q  101 tataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    ||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  27847796 tatcacacatcataatcaacaacaacatatcttattcagcttcacagatta 27847746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 44 - 267
Target Start/End: Complemental strand, 17138083 - 17137861
Alignment:
Q  44 aattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttc 143  Q
    |||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||| || ||||| ||||||  ||||| || ||| |||||||    
T  17138083 aattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaacacaaacatctcatat-cagcttc 17137985  T
Q  144 acagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcacta 243  Q
    ||||||| ||  |||||||||||||||||||||||| |||| ||||||||||| | || ||| ||| || ||||| ||||||   | ||||||||||||     
T  17137984 acagattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaattcaagcaacacagatcacaacattctcacttgcactc 17137885  T
Q  244 agttctagaagtgctcgcgaggcg 267  Q
    |||||| |||||||||||||||||    
T  17137884 agttctggaagtgctcgcgaggcg 17137861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 40443446 - 40443597
Alignment:
Q  1 cagcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaaca 99  Q
    |||||||||| |||||| |||| |||||||||||||| ||||||| |||||||||||||||||||| | ||||||| |||||||||||||||||||||||    
T  40443446 cagcaacatacgcagtaaacaaacagcatgacataataatatcaatttcaattcatcaacatcttaggtatacaaatattcttcaagtaatgcataaaca 40443545  T
Q  100 ttataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    ||||| ||| |||||||||||||| ||||||||||| |||||||||||||||    
T  40443546 ttatatcacatcataatcaacaacgacatatcttatacagcttcacagatta 40443597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 44 - 267
Target Start/End: Original strand, 12187113 - 12187335
Alignment:
Q  44 aattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttc 143  Q
    |||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||| || ||||| |||||   ||||| ||||| ||||||||    
T  12187113 aattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaactcaaacatctctta-tcagcttc 12187211  T
Q  144 acagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcacta 243  Q
    ||||||| ||  |||||||||||||||||||||||| |||| || |||||||||| || ||| ||| || ||| | |||||  | | ||||||||||||     
T  12187212 acagattgcagttaacttcttatataggtctcattactacctaatggtccatctctaatcaattcaagcaacatatatcactatattctcacttgcactc 12187311  T
Q  244 agttctagaagtgctcgcgaggcg 267  Q
    |||||| |||||||||||||||||    
T  12187312 agttctggaagtgctcgcgaggcg 12187335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 81 - 267
Target Start/End: Complemental strand, 18154821 - 18154634
Alignment:
Q  81 ttcaagtaatgca--taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcatt 178  Q
    |||||||||||||  ||||||||||| | | ||||| ||||||  ||||| || ||  |||||||||| ||| ||  |||||||||||||||||||||||    
T  18154821 ttcaagtaatgcaattaaacattatatcgcatcatattcaacattaacatctcataa-cagcttcacatattgcagttaacttcttatataggtctcatt 18154723  T
Q  179 attacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggcg 267  Q
    | ||||||| |||||||||  || |||||||||||||||| ||| ||||| ||||||||||||| |||||| |||||||||||||||||    
T  18154722 actacccaatggtccatctttaatcaaatcatgcgacacagatcgcatttccctcacttgcactcagttctggaagtgctcgcgaggcg 18154634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 137 - 267
Target Start/End: Original strand, 9703458 - 9703588
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||  |||||||||||||||||| ||||| |||||||||||||||||| || ||||| |||||||||  ||| || | ||||||||    
T  9703458 cagcttcacagattgcagttaacttcttatataggtcacattaatacccaagggtccatctctaatcaaattatgcgacacggatcgcaatatcctcact 9703557  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||||| |||||| |||||||||||||||||    
T  9703558 tgcactcagttctggaagtgctcgcgaggcg 9703588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 12698885 - 12699040
Alignment:
Q  1 cagcaacataggcagtatacaa----cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata- 95  Q
    ||||||||||||||||||||||    |||||||||||||| ||||||| | ||||||||||||||||||   || |||| ||||||||||||||||| |     
T  12698885 cagcaacataggcagtatacaaaacacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgcacat 12698984  T
Q  96 aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  12698985 aacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 12699040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 151
Target Start/End: Original strand, 9509247 - 9509397
Alignment:
Q  5 aacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacat 100  Q
    ||||||||||||||||||   |||||||||||||| ||||||| | ||||||||||||||||||   || |||| ||||||||||||||||| | ||||     
T  9509247 aacataggcagtatacaataacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgcacataacac 9509346  T
Q  101 tataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  9509347 tatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 9509397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 26212050 - 26212217
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaa 97  Q
    ||||||||||||||||||||||   |||||||||||||| ||||||| | ||||||| ||||||||||   || |||| | |  ||||||||||||||||    
T  26212050 cagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaacatcttaaatattcaaataattctcaagtaatgcataaa 26212149  T
Q  98 -cattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 164  Q
     ||||||| ||| | |||||||||||||||| ||||||  ||||||||||||||| || |||| ||||    
T  26212150 acattatatcacattataatcaacaacaacacatcttaaacagcttcacagattataattaacctctt 26212217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 94 - 261
Target Start/End: Original strand, 24054618 - 24054784
Alignment:
Q  94 taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattacccaagggtcc 193  Q
    ||||||| ||| ||| ||||||||||||  ||||| || ||  |||||||||||||| ||  ||||| |||||||||||||||||| |||||||||||||    
T  24054618 taaacatcatatcacatcataatcaacactaacatctcataa-cagcttcacagattgcagttaactccttatataggtctcattactacccaagggtcc 24054716  T
Q  194 atctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgc 261  Q
    ||||| || | ||| |||||||||| ||| || | | ||||||| |||| |||||| |||||||||||    
T  24054717 atctctaatcgaattatgcgacacagatcgcaatattctcactttcactcagttctggaagtgctcgc 24054784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 151
Target Start/End: Complemental strand, 18456478 - 18456326
Alignment:
Q  2 agcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aac 98  Q
    |||||||||||||||||||||  || ||||||||||| ||||||||| ||| ||| ||||||||||   || |||  || |||||||||||||| | |||    
T  18456478 agcaacataggcagtatacaaaacaacatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaattatacttcaagtaatgcacataac 18456379  T
Q  99 attataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  18456378 attatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 18456326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 10589093 - 10589246
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaa 97  Q
    |||||||||| |||||||||||   || ||||||||||| ||||||| | ||||||| |||||||||     | |||| |||||||||| ||||||||||    
T  10589093 cagcaacatatgcagtatacaaaaacaacatgacataatcatatcaattgcaattcaacaacatcttcaatgttcaaatattcttcaagcaatgcataaa 10589192  T
Q  98 cattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    ||||||| ||| ||||||||| |||||||| ||||||   ||||||||||||||    
T  10589193 cattatatcacatcataatcagcaacaacacatcttaaatagcttcacagatta 10589246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 156 - 267
Target Start/End: Original strand, 11880463 - 11880574
Alignment:
Q  156 taacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagt 255  Q
    |||| ||||||||||||| ||||| |||||||||||||||||| || ||||| |||||||||| ||| ||   |||||||||||||| |||||| |||||    
T  11880463 taacatcttatataggtcacattactacccaagggtccatctcaaatcaaattatgcgacacatatcgcaacatcctcacttgcactcagttctggaagt 11880562  T
Q  256 gctcgcgaggcg 267  Q
    |||| |||||||    
T  11880563 gctcacgaggcg 11880574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 151
Target Start/End: Complemental strand, 16386309 - 16386160
Alignment:
Q  6 acataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaa-catt 101  Q
    |||||||||||||||||   ||||||||||||| |||||||| |  | |||||||||||||||   || |||||| |  |||||||||||||||| ||||    
T  16386309 acataggcagtatacaaaatcagcatgacataaatatatcaattgtatttcatcaacatcttaaatattcaaacaattctcaagtaatgcataaaacatt 16386210  T
Q  102 ataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||  || |||||||||||||||||| ||||||  |||||||||||||||    
T  16386209 atattacatcataatcaacaacaacacatcttaaacagcttcacagatta 16386160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 264
Target Start/End: Complemental strand, 19649469 - 19649285
Alignment:
Q  81 ttcaagtaatgca--taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcatt 178  Q
    |||||||||||||  ||| ||||||| ||| ||||| ||||||  |||||  ||||  | |||||||||||| ||  |||||||| || ||||||||| |    
T  19649469 ttcaagtaatgcaattaatcattatatcacatcatattcaacactaacatcacttaa-ctgcttcacagattgcagttaacttctaatttaggtctcaat 19649371  T
Q  179 attacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgag 264  Q
    | |||||||||||||||||| || ||||| |||||||||| ||| || | ||||||||| ||||  ||||| ||||||||||||||    
T  19649370 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttacactcggttctggaagtgctcgcgag 19649285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 134
Target Start/End: Original strand, 38227536 - 38227671
Alignment:
Q  2 agcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aac 98  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||| ||| ||| ||||||||||   || |||  || |||||| ||||| | | | |    
T  38227536 agcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaattatacttcaattaatgtacatatc 38227635  T
Q  99 attataacacttcataatcaacaacaacatatctta 134  Q
    |||||| ||| || ||||||||| ||||||||||||    
T  38227636 attatatcacatcttaatcaacatcaacatatctta 38227671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 267
Target Start/End: Complemental strand, 12321666 - 12321540
Alignment:
Q  141 ttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgca 240  Q
    |||||||||| ||  |||| ||||||||||||| ||||| |||| ||| ||||||| | || ||| |||||||||||| ||| |    | |||| |||||    
T  12321666 ttcacagattgcagttaacatcttatataggtcacattactacctaagagtccatccctaatcaattcatgcgacacagatcgctacattctcatttgca 12321567  T
Q  241 ctaagttctagaagtgctcgcgaggcg 267  Q
    || |||||| |||||||||||||||||    
T  12321566 ctcagttctggaagtgctcgcgaggcg 12321540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 3564431 - 3564294
Alignment:
Q  1 cagcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-a 96  Q
    ||||||||||||||||||||   |||| ||||||||||| |||||||||  || ||| |||||||| |   |||||  |||  |||||||||||| || |    
T  3564431 cagcaacataggcagtatacaaaaacaacatgacataataatatcaaatgtaagtcaacaacatctcaattatacattcataattcaagtaatgcgtata 3564332  T
Q  97 acattataacacttcataatcaacaacaacatatctta 134  Q
    |||||| | ||| |||||||||||| ||||| ||||||    
T  3564331 acattagatcacatcataatcaacatcaacacatctta 3564294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 2530203 - 2530139
Alignment:
Q  1 cagcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatctt 64  Q
    ||||||||||||||  |||||| || ||||||||||| ||||||| ||||||||| |||||||||    
T  2530203 cagcaacataggcaacatacaaacaacatgacataataatatcaatttcaattcaacaacatctt 2530139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 48273443 - 48273508
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatct 63  Q
    |||||||| |||||||||||||   |||||||||||||| ||||||||| ||| ||| ||||||||    
T  48273443 cagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatct 48273508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 267
Target Start/End: Complemental strand, 10508918 - 10508880
Alignment:
Q  229 tcctcacttgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||||||||||||| |||||| |||||||||||||||||    
T  10508918 tcctcacttgcactcagttctggaagtgctcgcgaggcg 10508880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 124; Significance: 7e-64; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 174821 - 175086
Alignment:
Q  1 cagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgca--taaac 98  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |  ||| ||  |||  |||||||||||||  |||||    
T  174821 cagcaacataggcagtatacaacagcatgacatgattatatcaaattcaattcaacaacatctcaatcattcattcataattcaagtaatgcaactaaac 174920  T
Q  99 attataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctc 198  Q
    |||||| ||| ||||| ||||||  ||||| || || | ||||||||||||| ||  |||||||||||||||||||||||| |||| |||||||||||||    
T  174921 attatatcacgtcatattcaacactaacatctcataat-agcttcacagatttcagttaacttcttatataggtctcattactaccaaagggtccatctc 175019  T
Q  199 caaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgagg 265  Q
     || |||||||||||||||| ||| ||||||||||||||| |||  ||||| |||||||||||||||    
T  175020 taatcaaatcatgcgacacagatcgcattttcctcacttggactcggttctggaagtgctcgcgagg 175086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 38 - 151
Target Start/End: Original strand, 124679 - 124793
Alignment:
Q  38 atatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttatt 136  Q
    ||||||| | |||||||||||| | |||   || |||| ||||||||||||||||||| ||||||||| ||| |||||||||||| ||||| ||||||      
T  124679 atatcaattgcaattcatcaacgttttaaatattcaaatattcttcaagtaatgcatataacattatatcacatcataatcaacatcaacacatcttaaa 124778  T
Q  137 cagcttcacagatta 151  Q
    |||||||||||||||    
T  124779 cagcttcacagatta 124793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 51637 - 51787
Alignment:
Q  1 cagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacat 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||| || ||||||| |||||||||||||    
T  51637 cagcaacataggcagtatacaacatcatgacataattataacaaattcaattcatcaacatcttatgtatacaaatatccttcaagaaatgcataaacat 51736  T
Q  101 tataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  51737 tataacacttcatattcaacaacaacatatcttattcagcttcacagatta 51787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 123; Significance: 3e-63; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 17046542 - 17046692
Alignment:
Q  1 cagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacat 100  Q
    |||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  17046542 cagcaacataggtagtatagaacaacatgacataattatatcaaattcaattcatcaacatcttatgtatacaaacattcttcaagtaatgtataaacat 17046641  T
Q  101 tataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||||    
T  17046642 tataacacatcttaatcaacaacaacatatcttattcagcttcacagatta 17046692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 7 - 151
Target Start/End: Complemental strand, 14053361 - 14053215
Alignment:
Q  7 cataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacat-cttatgcatacaaacattcttcaagtaatgcataaacattata 104  Q
    ||||| |||||||||| |||||||||||||| ||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  14053361 catagacagtatacaaacagcatgacataataatatcaatttcaattcatcaacattcttatgcatacaaatattcttcaagtaatgcataaacattata 14053262  T
Q  105 acacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
     ||| |||||||||||||||||||||||||| | |||||||||||||    
T  14053261 tcacatcataatcaacaacaacatatcttatacggcttcacagatta 14053215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 32 - 267
Target Start/End: Complemental strand, 15121834 - 15121601
Alignment:
Q  32 ataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatc 131  Q
    ||||||||||||| |||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||| || |||||||||||   ||||| ||    
T  15121834 ataattatatcaa-ttcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcataatcaactcaaacatctc 15121736  T
Q  132 ttattcagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcc 231  Q
     || ||||| ||||||||| ||  |||||||||||||||||||||||| |||| || ||||||| || |||||| | || ||||||| ||| ||   | |    
T  15121735 ata-tcagcctcacagattgcagttaacttcttatataggtctcattactacctaatggtccatgtctaaacaagttattcgacacagatcgcaaagttc 15121637  T
Q  232 tcacttgcactaagttctagaagtgctcgcgaggcg 267  Q
    ||||||||||| | |||| |||||||||||||||||    
T  15121636 tcacttgcactcaattctggaagtgctcgcgaggcg 15121601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 12902811 - 12902978
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaa 97  Q
    ||||||||||||||||||||||   |||||||||||||| ||||||| |  |||||||||||||||||   || |||| ||| |||||||||||||||||    
T  12902811 cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgtaattcatcaacatcttaaatattcaaatattattcaagtaatgcataaa 12902910  T
Q  98 -cattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 164  Q
     ||||||| ||| |||||||||||||||||| ||||||  ||||||||||||||| || |||| ||||    
T  12902911 acattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacctctt 12902978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 137 - 267
Target Start/End: Original strand, 13569703 - 13569833
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||  |||||||||||||||||| ||||| |||||||||||||||||| || ||||| |||||||||  ||| || | ||||||||    
T  13569703 cagcttcacagattgcagttaacttcttatataggtcacattaatacccaagggtccatctctaatcaaattatgcgacacggatcgcaatatcctcact 13569802  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||||| |||||| |||||||||||||||||    
T  13569803 tgcactcagttctggaagtgctcgcgaggcg 13569833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 7088931 - 7089098
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcat-aa 96  Q
    ||||||||||||||||||||||   |||||||||||||| ||||||| | ||||||||||||||||||   || |||| ||| |||||||||||||| ||    
T  7088931 cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttacatattcaaatattattcaagtaatgcataaa 7089030  T
Q  97 acattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 164  Q
    |||||||| ||| ||||||| | |||||||| ||||||  || |||||||||||| || |||| ||||    
T  7089031 acattatatcacatcataattagcaacaacacatcttaaacaacttcacagattataattaacctctt 7089098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 267
Target Start/End: Original strand, 23843669 - 23843799
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||  |||| ||||||||||||| |||||  ||||||||||||||||| || ||||| |||||||||| ||| ||   ||||||||    
T  23843669 cagcttcacagattgcagttaacatcttatataggtcacattaccacccaagggtccatctctaatcaaattatgcgacacagatcgcaacatcctcact 23843768  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||||| |||||| |||||||||||||||||    
T  23843769 tgcactcagttctggaagtgctcgcgaggcg 23843799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 4 - 151
Target Start/End: Original strand, 44052886 - 44053037
Alignment:
Q  4 caacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aaca 99  Q
    |||||||||||||||||||   |||||||||||||| ||||||| | ||||||||||||||||||   || |||| ||||||||||||||||  | ||||    
T  44052886 caacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgctcataaca 44052985  T
Q  100 ttataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    ||||| ||| |||||||||||| || || ||||||  |||||||||||||||    
T  44052986 ttatatcacatcataatcaacatcagcacatcttaaacagcttcacagatta 44053037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 84 - 267
Target Start/End: Original strand, 15093911 - 15094094
Alignment:
Q  84 aagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattatta 182  Q
    |||||||||| | ||||||||| ||| ||||| ||||||  ||||| || ||  |||||||| ||||| ||  |||||||||||||||||| ||||| ||    
T  15093911 aagtaatgcacataacattatatcacatcatattcaacattaacatttcataa-cagcttcagagattgcagttaacttcttatataggtcacattacta 15094009  T
Q  183 cccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggcg 267  Q
     ||||||||||||||| || ||||| |||||||||| ||| || | |||| ||||||||| |||| | |||||||||||||||||    
T  15094010 accaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctaacttgcactcagttttggaagtgctcgcgaggcg 15094094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 151
Target Start/End: Original strand, 22636512 - 22636642
Alignment:
Q  21 aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattataacacttcataatcaa 119  Q
    |||||||||||||||| ||||||| | ||||||||||||||||||   || |||| ||||||||||||||||||| ||||||||| ||| |||||||| |    
T  22636512 aacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgcatataacattatatcacatcataatcga 22636611  T
Q  120 caacaacatatcttattcagcttcacagatta 151  Q
    || ||||| ||||||  |||||||||||||||    
T  22636612 catcaacacatctta-acagcttcacagatta 22636642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 151
Target Start/End: Complemental strand, 16270301 - 16270149
Alignment:
Q  2 agcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aac 98  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||| ||| | | ||||||||||   || |||  || |||||||||||||| | |||    
T  16270301 agcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagttaacaacatcttaaatattcaattatacttcaagtaatgcacataac 16270202  T
Q  99 attataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  16270201 attatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 16270149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 23374426 - 23374272
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcat-aa 96  Q
    ||||||||||||||||||||||   ||||||||||||| |||||||| | ||||||| ||||||||||   || |||| | |  ||||||||||||| ||    
T  23374426 cagcaacataggcagtatacaaaatcagcatgacataaatatatcaattgcaattcaacaacatcttaaatattcaaataattctcaagtaatgcataaa 23374327  T
Q  97 acattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||||| ||| |||||||||||||||||| ||||||   ||||||| ||||||    
T  23374326 acattatatcacatcataatcaacaacaacagatcttaaaaagcttcagagatta 23374272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 137 - 265
Target Start/End: Original strand, 44675823 - 44675951
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||  |||||||||| ||||||| ||||| |||| | ||||||||||| || ||||| |||||||||| ||| ||   ||||||||    
T  44675823 cagcttcacagattgcagttaacttcttaaataggtcacattactacctaggggtccatctctaatcaaattatgcgacacagatcgcaacatcctcact 44675922  T
Q  237 tgcactaagttctagaagtgctcgcgagg 265  Q
    |||||| |||||| |||||||||||||||    
T  44675923 tgcactcagttctggaagtgctcgcgagg 44675951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 267
Target Start/End: Original strand, 12570212 - 12570342
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||  |||| || |||||||||| ||||| |||||||||||||||||| |||||| | ||||||||||  || ||   | ||||||    
T  12570212 cagcttcacagattgcagttaacatcctatataggtcacattactacccaagggtccatctctaaacaagttatgcgacacaggtcgcaaagttctcact 12570311  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||||| |||||| |||||||||||||||||    
T  12570312 tgcactcagttctggaagtgctcgcgaggcg 12570342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 16377588 - 16377436
Alignment:
Q  1 cagcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aac 98  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |||  |||||||||||| || |||    
T  16377588 cagcaacataggcagtatacaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaattatacattcataattcaagtaatgcgtataac 16377489  T
Q  99 attataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||| ||| |||||||||||| ||||  ||||||  ||||| |||||||||    
T  16377488 attatatcacatcataatcaacatcaacgcatcttaaacagctccacagatta 16377436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 151
Target Start/End: Complemental strand, 16240035 - 16239883
Alignment:
Q  2 agcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aac 98  Q
    ||||| |||||||||||||||  |||||||||||||| ||||||||| ||| ||| ||||||||||   || |||  || ||| |||||||||| | |||    
T  16240035 agcaaaataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaattatactttaagtaatgcaaataac 16239936  T
Q  99 attataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||| ||  |||||||||||| ||||| ||||||  ||||||| |||||||    
T  16239935 attatatcatatcataatcaacatcaacacatcttaaacagcttcgcagatta 16239883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 267
Target Start/End: Complemental strand, 15125038 - 15124952
Alignment:
Q  181 tacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||||| ||||||| ||| |||||||| |||||||||| |||  | | |||||||||||||| |||||| |||||||||||||||||    
T  15125038 tacccaggggtccaactctaaacaaattatgcgacacatatcgaaatatcctcacttgcactcagttctggaagtgctcgcgaggcg 15124952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 7798828 - 7798958
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-a 96  Q
    ||||||||||||||||||||||   |||||||||||||| ||||||| | ||| ||||||||||||||   || |||  || |||||||||||||| | |    
T  7798828 cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcatcaacatcttaaatattcaattatacttcaagtaatgcacata 7798927  T
Q  97 acattataacacttcataatcaacaacaaca 127  Q
    ||||| || |||  ||||||||||| |||||    
T  7798928 acattgtatcacaacataatcaacatcaaca 7798958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 151
Target Start/End: Original strand, 3096772 - 3096851
Alignment:
Q  72 caaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||| ||||||||||||||||||||||||| || | | ||||||||| |||||||| ||||||  |||||||||| ||||    
T  3096772 caaatattcttcaagtaatgcataaacattgtatctcatcataatcagcaacaacacatcttaaacagcttcacatatta 3096851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 17048055 - 17047989
Alignment:
Q  82 tcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacag 147  Q
    |||||||||||||||| ||||||| ||| |||||||||||||||||| ||||||  |||||||||||    
T  17048055 tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacag 17047989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 14038702 - 14038856
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-a 96  Q
    |||||||| | |||||||||||   || |||| |||||| ||||||||| ||| ||| |||||||| |   |||||  |||  ||||||||||||| | |    
T  14038702 cagcaacacatgcagtatacaaaaacaacatggcataataatatcaaatgcaagtcaacaacatctcaattatacattcatatttcaagtaatgcacata 14038801  T
Q  97 acattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||||| ||| |||||||||||| ||||| || |||  |||||||||||||||    
T  14038802 acattatatcacatcataatcaacatcaacacatgttaaacagcttcacagatta 14038856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 43256225 - 43256161
Alignment:
Q  1 cagcaacataggcagtatac-aacagcatgacataattatatcaaattcaattcatcaacatctt 64  Q
    ||||||||||||||| |||| |||| ||||||||||| ||||||| ||||||||| |||||||||    
T  43256225 cagcaacataggcagcataccaacaacatgacataataatatcaatttcaattcaacaacatctt 43256161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 267
Target Start/End: Complemental strand, 16488005 - 16487876
Alignment:
Q  138 agcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcactt 237  Q
    ||||||||||||  ||| |||| ||||| ||||| | ||||| |||| ||||||||||| | || ||| | |||||| ||| ||| ||   |||| ||||    
T  16488005 agcttcacagatctcaattaacatcttaaataggacacattactacctaagggtccatcccaaatcaacttatgcgaaacagatcgcaacatcctaactt 16487906  T
Q  238 gcactaagttctagaagtgctcgcgaggcg 267  Q
    ||| | |||||| |||||||||||||||||    
T  16487905 gcattcagttctggaagtgctcgcgaggcg 16487876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 151
Target Start/End: Original strand, 7893758 - 7893908
Alignment:
Q  2 agcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aa 97  Q
    |||||||||||||||||||   |||||||||||||||| ||||||| | ||| ||| || |||||||   || |||  || |||||||||||||| | |     
T  7893758 agcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaattatacttcaagtaatgcacatac 7893857  T
Q  98 cattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    ||||||  ||| |||||||   || ||||| ||||||  |||||||||||||||    
T  7893858 cattatttcacatcataat---cagcaacacatcttaaacagcttcacagatta 7893908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 52873434 - 52873367
Alignment:
Q  1 cagcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatctta 65  Q
    ||||||||||||||||||||   |||||||||||||||| ||||||| | ||| ||| || |||||||    
T  52873434 cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatctta 52873367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 4 - 151
Target Start/End: Complemental strand, 1112 - 965
Alignment:
Q  4 caacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattat 103  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  1112 caacataggcagtatacaacatcatgacataattatatcaatttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataaacattat 1013  T
Q  104 aacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    ||||| ||||||||||||||||||||| |||| |||||||||||||||    
T  1012 aacacatcataatcaacaacaacatattttatacagcttcacagatta 965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 114; Significance: 7e-58; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 37723958 - 37724225
Alignment:
Q  1 cagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgca--taaac 98  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |  ||| ||  |||  |||||||||||||  |||||    
T  37723958 cagcaacataggcagtatacaacagcatgacatgattatatcaaattaaattcatcaacatctcaatcattcattcataattcaagtaatgcaattaaac 37724057  T
Q  99 attataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctc 198  Q
    |||||| ||| ||||| ||||||  ||||| ||  |  |||||||||||||| ||  ||||||||||||||||||||| || |||| |||||||||||||    
T  37724058 attatatcacatcatattcaacactaacatctcaaaa-cagcttcacagattgcagttaacttcttatataggtctcaatactaccgaagggtccatctc 37724156  T
Q  199 caaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggcg 267  Q
     || ||||| |||||||||| ||| || | |||||||||||||| |||||| |||||||||||||||||    
T  37724157 taatcaaattatgcgacacagatcgcaatctcctcacttgcactcagttctggaagtgctcgcgaggcg 37724225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 44 - 267
Target Start/End: Original strand, 22032415 - 22032637
Alignment:
Q  44 aattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttc 143  Q
    |||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||| || ||||| ||||||  ||||| || ||| |||||||    
T  22032415 aattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaacacaaacatctcgtat-cagcttc 22032513  T
Q  144 acagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcacta 243  Q
    ||||||| ||  |||||||||||||||||||||||| |||| ||||||||||||| || ||| ||| || ||||| ||||||   | ||||||||||||     
T  22032514 acagattgcagttaacttcttatataggtctcattactacctaagggtccatctctaatcaattcaagcaacacatatcacaacattctcacttgcactc 22032613  T
Q  244 agttctagaagtgctcgcgaggcg 267  Q
    |||||| |||||||||||||||||    
T  22032614 agttctggaagtgctcgcgaggcg 22032637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 44 - 263
Target Start/End: Complemental strand, 18770024 - 18769806
Alignment:
Q  44 aattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttc 143  Q
    |||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||| || ||||| ||||||  ||||| || || ||||||||    
T  18770024 aattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaacacaaacatctcata-tcagcttc 18769926  T
Q  144 acagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcacta 243  Q
    ||||||| ||  |||||||||||||||||||||||| |||| ||||||||||| | || ||| ||| || ||||| |||||    | ||||||||| ||     
T  18769925 acagattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaattcaagcaacacagatcactacattctcacttgcgctc 18769826  T
Q  244 agttctagaagtgctcgcga 263  Q
    |||||| |||||||||||||    
T  18769825 agttctggaagtgctcgcga 18769806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 137 - 267
Target Start/End: Original strand, 26704257 - 26704387
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||  |||||||||||||| ||||||||| |||||||||||||||| | || |||||||||||||||| ||||||||||||| |||    
T  26704257 cagcttcacagattgcagttaacttcttatatatgtctcattactacccaagggtccatccctaatcaaatcatgcgacacagatcacattttccttact 26704356  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||||| |||||| |||||||||||||||||    
T  26704357 tgcactcagttctggaagtgctcgcgaggcg 26704387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 137 - 267
Target Start/End: Original strand, 26973990 - 26974120
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||  |||||||||||||| ||||||||| |||||||||||||||| | || |||||||||||||||| ||||||||||||| |||    
T  26973990 cagcttcacagattgcagttaacttcttatatatgtctcattactacccaagggtccatccctaatcaaatcatgcgacacagatcacattttccttact 26974089  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||||| |||||| |||||||||||||||||    
T  26974090 tgcactcagttctggaagtgctcgcgaggcg 26974120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 21293036 - 21292883
Alignment:
Q  1 cagcaacataggcagtatacaa-cagcatgacataattatatcaa-attcaa-ttcatcaacatcttatgcatacaaacattcttcaagtaatgcataaa 97  Q
    ||||||||||||||||| |||| ||| |||||||||| ||||||| |||||| ||||||||||||||| | ||||||  |||||||||||||||||||||    
T  21293036 cagcaacataggcagtaaacaaacagtatgacataataatatcaatattcaaattcatcaacatcttaggtatacaattattcttcaagtaatgcataaa 21292937  T
Q  98 cattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    ||||||| ||| ||||||||| |||||||||||||||| || ||||||||||||    
T  21292936 cattatatcacatcataatcatcaacaacatatcttatacaacttcacagatta 21292883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 44 - 267
Target Start/End: Original strand, 23572178 - 23572400
Alignment:
Q  44 aattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttc 143  Q
    |||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||| || |||||||||||   ||||| || || ||| ||||    
T  23572178 aattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcataatcaactcaaacatctcata-tcaacttc 23572276  T
Q  144 acagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcacta 243  Q
    ||| ||| ||  |||||||||||||||||||||||| |||| ||||||||||| | || ||| ||| || ||  | ||||||   | ||||||||||||     
T  23572277 acaaattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaattcaagcaacttagatcacaacattctcacttgcactc 23572376  T
Q  244 agttctagaagtgctcgcgaggcg 267  Q
    |||||| ||||||| |||||||||    
T  23572377 agttctggaagtgcgcgcgaggcg 23572400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 137 - 267
Target Start/End: Original strand, 23201559 - 23201690
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattaccc-aagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcac 235  Q
    |||||||||||||| ||  ||||||||| |||||||||||||| ||||| ||||||||||||| |||||||| |||||||||| ||| || | |||||||    
T  23201559 cagcttcacagattgcagttaacttcttctataggtctcattactaccccaagggtccatctctaaacaaattatgcgacacagatcgcaatatcctcac 23201658  T
Q  236 ttgcactaagttctagaagtgctcgcgaggcg 267  Q
    ||||||| ||||||| ||||||||||||||||    
T  23201659 ttgcactcagttctaaaagtgctcgcgaggcg 23201690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 8286910 - 8286760
Alignment:
Q  1 cagcaacataggcagtatacaa----cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata- 95  Q
    ||||||||||||||||||||||    |||||||||||||| ||||||| | ||||||||||||||||||   |  |||||||||||||||||||||| |     
T  8286910 cagcaacataggcagtatacaaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaataatcaaacattcttcaagtaatgcacat 8286811  T
Q  96 aacattataacacttcataatcaacaacaacatatcttattcagcttcaca 146  Q
    ||||||||| ||| |||||||||||| ||||| ||||||  ||||||||||    
T  8286810 aacattatatcacatcataatcaacatcaacacatcttaaacagcttcaca 8286760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 267
Target Start/End: Original strand, 14079340 - 14079469
Alignment:
Q  138 agcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcactt 237  Q
    ||||||||||||| ||  |||||||||| ||||||| ||||| |||||| ||||||||||| || ||||| |||||||||| ||| ||   |||||||||    
T  14079340 agcttcacagattgcagttaacttcttaaataggtcacattactacccaggggtccatctctaatcaaattatgcgacacagatcgcaacatcctcactt 14079439  T
Q  238 gcactaagttctagaagtgctcgcgaggcg 267  Q
    ||||| ||||||||||||||||||||||||    
T  14079440 gcactcagttctagaagtgctcgcgaggcg 14079469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 84 - 267
Target Start/End: Original strand, 21873387 - 21873570
Alignment:
Q  84 aagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattatta 182  Q
    |||||||||| | ||||||||| ||| ||||| ||||||  ||||| || ||  |||||||||||||| ||  |||||||||||||||||| ||||| ||    
T  21873387 aagtaatgcacataacattatatcacatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttatataggtcacattacta 21873485  T
Q  183 cccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggcg 267  Q
    ||||||||| |||||| || ||||| |||||||||| ||| || | |||| ||||||||| ||||||  ||||||||||||||||    
T  21873486 cccaagggttcatctctaatcaaattatgcgacacagatctcaatatcctaacttgcactcagttctgtaagtgctcgcgaggcg 21873570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 23390563 - 23390409
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-a 96  Q
    ||||||||||| ||||||||||   || ||||||||||| ||||||| | ||||||||||||||||||   || |||| ||||||||||||||||| | |    
T  23390563 cagcaacatagacagtatacaaaaacaacatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgcacata 23390464  T
Q  97 acattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||||| ||| |||||||||||| ||||| ||||||   ||||||||||||||    
T  23390463 acattatatcacatcataatcaacatcaacacatcttaaatagcttcacagatta 23390409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 137 - 265
Target Start/End: Complemental strand, 23501273 - 23501145
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||| || ||| | || ||||||| ||| ||   | ||||||    
T  23501273 cagcttcacagattgcaattaacttcttatataggtctcattactacccaagggtccatctctaatcaacttatacgacacagatcgcaacattctcact 23501174  T
Q  237 tgcactaagttctagaagtgctcgcgagg 265  Q
    | |||| |||||| |||||||||||||||    
T  23501173 ttcactcagttctggaagtgctcgcgagg 23501145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 151
Target Start/End: Original strand, 24493624 - 24493776
Alignment:
Q  2 agcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aac 98  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||| ||| ||| ||||||||||   || |||  || |||||||| ||||| | |||    
T  24493624 agcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaattatacttcaagtgatgcacataac 24493723  T
Q  99 attataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||| ||| |||||||||||| ||||||||||||   ||||||||||||||    
T  24493724 attatatcacatcataatcaacatcaacatatcttaaatagcttcacagatta 24493776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 22075073 - 22075240
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaa 97  Q
    |||||||||||| |||||||||   || ||||||||||| ||||||| | ||||||| ||||||||||   || |||| | |  ||||||||||||||||    
T  22075073 cagcaacataggaagtatacaaaatcaacatgacataataatatcaattgcaattcaacaacatcttaaatattcaaataattctcaagtaatgcataaa 22075172  T
Q  98 -cattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 164  Q
     ||||||| ||| |||||||||||||||||| ||||||  |||||||||| |||| || |||| ||||    
T  22075173 acattatatcacatcataatcaacaacaacacatcttaaacagcttcacatattataattaacctctt 22075240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 9078006 - 9078160
Alignment:
Q  1 cagcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-a 96  Q
    ||||||||||||||||||||   |||||||||||||||| ||||||| | ||| ||| |||||||| |   |||||  |||   ||||||||||| || |    
T  9078006 cagcaacataggcagtatacgaaaacagcatgacataataatatcaagtgcaagtcaacaacatctcaattatacattcataactcaagtaatgcgtata 9078105  T
Q  97 acattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  9078106 acattatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 9078160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 151
Target Start/End: Original strand, 24529277 - 24529428
Alignment:
Q  4 caacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aaca 99  Q
    |||||||||||||||||||   || ||||||||||| ||||||||| ||| ||| ||||||||||   |||||  |||   ||||||||||| || ||||    
T  24529277 caacataggcagtatacaaaaacaacatgacataatgatatcaaatgcaagtcaacaacatcttaattatacattcatatctcaagtaatgcttataaca 24529376  T
Q  100 ttataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    ||||| ||| ||||| |||||| ||||| ||||||  |||||||||||||||    
T  24529377 ttatatcacatcatattcaacatcaacacatcttaaacagcttcacagatta 24529428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 25431448 - 25431602
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-a 96  Q
    ||||||||||||||||||||||   || ||||||||||| ||||||| | ||| ||| ||||||||||    | |||  || |||||||||||||| | |    
T  25431448 cagcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtcaacaacatcttaaatgttcaattatacttcaagtaatgcacata 25431547  T
Q  97 acattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||||| ||| |||||||||||| ||||  ||||||  |||||||||||||||    
T  25431548 acattatatcacatcataatcaacatcaacgcatcttaaacagcttcacagatta 25431602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 267
Target Start/End: Original strand, 23512318 - 23512428
Alignment:
Q  157 aacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtg 256  Q
    |||||||||||||||||  | || |||||||||||||| ||| || ||||| |||||||||| ||| ||   |||| || |||||| |||||| ||||||    
T  23512318 aacttcttatataggtcataatactacccaagggtccacctctaatcaaattatgcgacacagatcgcaacatcctaacatgcactcagttctggaagtg 23512417  T
Q  257 ctcgcgaggcg 267  Q
    |||||||||||    
T  23512418 ctcgcgaggcg 23512428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 151
Target Start/End: Original strand, 13025366 - 13025518
Alignment:
Q  2 agcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aac 98  Q
    |||||||||||||||||||||  |||||||||||| | ||||||||| ||| ||| ||||||||||   || |||  || |||||| ||||| | | |||    
T  13025366 agcaacataggcagtatacaaaacagcatgacatattgatatcaaatgcaagtcaacaacatcttaaatattcaattatacttcaaataatgtacataac 13025465  T
Q  99 attataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||| ||| || ||||||||| ||||||||||||  || ||||||| ||||    
T  13025466 attatatcacatcgtaatcaacatcaacatatcttaaacaacttcacatatta 13025518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 151
Target Start/End: Original strand, 13095550 - 13095702
Alignment:
Q  2 agcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aac 98  Q
    |||||||||||||||||||||  |||||||||||| | ||||||||| ||| ||| ||||||||||   || |||  || |||||| ||||| | | |||    
T  13095550 agcaacataggcagtatacaaaacagcatgacatattgatatcaaatgcaagtcaacaacatcttaaatattcaattatacttcaaataatgtacataac 13095649  T
Q  99 attataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||| ||| || ||||||||| ||||||||||||  || ||||||| ||||    
T  13095650 attatatcacatcgtaatcaacatcaacatatcttaaacaacttcacatatta 13095702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 151
Target Start/End: Original strand, 25421589 - 25421740
Alignment:
Q  4 caacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aaca 99  Q
    |||||||||||||||||||   || ||||||||||| ||||||| | ||| ||| || |||||||   || |||  || |||||||||||||| | ||||    
T  25421589 caacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtcaacagcatcttaaatattcaattatacttcaagtaatgcacataaca 25421688  T
Q  100 ttataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    ||||| ||| |||||||||||| ||||  ||||||  |||||||||||||||    
T  25421689 ttatatcacatcataatcaacatcaacgcatcttaaacagcttcacagatta 25421740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 21729131 - 21729064
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatctta 65  Q
    ||||||||||||||||||||||   |||||||||||||| ||||||| | ||||||| ||||||||||    
T  21729131 cagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaacatctta 21729064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 21808456 - 21808389
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatctta 65  Q
    ||||||||||||||||||||||   |||||||||||||| ||||||| | ||||||| ||||||||||    
T  21808456 cagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaacatctta 21808389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 18356369 - 18356433
Alignment:
Q  1 cagcaacataggcagtatac-aacagcatgacataattatatcaaattcaattcatcaacatctt 64  Q
    ||||||||||||||| |||| |||||||||| ||||| ||||||| ||||||||| |||||||||    
T  18356369 cagcaacataggcagcatacaaacagcatgatataataatatcaatttcaattcaacaacatctt 18356433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 20910864 - 20910800
Alignment:
Q  1 cagcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatctt 64  Q
    ||||||||||| ||| |||||| |||||||||||||| ||||||| ||||||||| |||||||||    
T  20910864 cagcaacatagacagcatacaaacagcatgacataataatatcaatttcaattcaacaacatctt 20910800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 164
Target Start/End: Complemental strand, 22107357 - 22107273
Alignment:
Q  81 ttcaagtaatgcataa-acattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 164  Q
    |||||||||||||||| | |||||| ||| |||||||||||||||||| | ||||  ||||||||||||||| || |||| ||||    
T  22107357 ttcaagtaatgcataatatattatatcacatcataatcaacaacaacacaccttaaacagcttcacagattataattaacctctt 22107273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 22412241 - 22412302
Alignment:
Q  4 caacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatct 63  Q
    |||||||||||||||||||  |||||||||||||| ||||||||| ||| ||| ||||||||    
T  22412241 caacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatct 22412302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 1096544 - 1096668
Alignment:
Q  21 aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattataacacttcataatcaa 119  Q
    |||| ||| ||||||| ||||||||| ||| ||| |||||||| |   |||||  |||  ||||||||||||||| ||||||||| ||| ||||||||||    
T  1096544 aacaacataacataataatatcaaatgcaaatcaacaacatctcacatatacattcataattcaagtaatgcatataacattatatcacatcataatcaa 1096643  T
Q  120 caacaacatatcttattcagcttca 144  Q
    || ||||  ||||||  ||||||||    
T  1096644 catcaacgcatcttaaacagcttca 1096668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 18418638 - 18418699
Alignment:
Q  4 caacataggcagtatac-aacagcatgacataattatatcaaattcaattcatcaacatctta 65  Q
    ||||||||||||||||| |||||||||||||||| ||||||  | ||||||| ||||||||||    
T  18418638 caacataggcagtatacaaacagcatgacataataatatcatttgcaattca-caacatctta 18418699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 32 - 266
Target Start/End: Original strand, 26911 - 27143
Alignment:
Q  32 ataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatc 131  Q
    ||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| || ||||||||||||  ||||| ||    
T  26911 ataattatatcaa-ttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataatacatcataatcaacacaaacatctc 27009  T
Q  132 ttattcagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcc 231  Q
     ||  |||||||||||||| ||  |||||||||||||| ||||||||| |||||||||||||||||| |||||||  || ||| ||| ||| || | |||    
T  27010 ata-acagcttcacagattgcagttaacttcttatatatgtctcattactacccaagggtccatctctaaacaaaatattcgaaacagatcgcaatatcc 27108  T
Q  232 tcacttgcactaagttctagaagtgctcgcgaggc 266  Q
    ||||||||||| |||||| ||| |||| |||||||    
T  27109 tcacttgcactcagttctggaaatgcttgcgaggc 27143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 111; Significance: 4e-56; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 16920696 - 16920546
Alignment:
Q  1 cagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacat 100  Q
    ||||| |||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  16920696 cagcagcataggcagtatacaacatcatgacataagtatatcaaattccattcatcaacatcttatgtatacaaatattcttcaagtaatgcataaacat 16920597  T
Q  101 tataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||| ||| ||||||||||||||||| ||||||||||||||||| ||||||    
T  16920596 tataccacatcataatcaacaacaacttatcttattcagcttcatagatta 16920546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 22831558 - 22831710
Alignment:
Q  1 cagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatctta--tgcatacaaacattcttcaagtaatgcataaac 98  Q
    |||||||||||||| | | ||||  ||||||||||| ||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||    
T  22831558 cagcaacataggcactgttcaacgacatgacataatcatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaac 22831657  T
Q  99 attataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  22831658 attataacacatcataatcaacaacaacatatcttattcagcttcacagatta 22831710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 12 - 152
Target Start/End: Original strand, 11185571 - 11185711
Alignment:
Q  12 gcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattataacacttc 111  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||| ||||||||||||    
T  11185571 gcagtgtacaacaacatgacataattatatcaaattcaattcatcagcatcttttgtatacaaacattcttcaagtaatgcataaactttataacacttc 11185670  T
Q  112 ataatcaacaacaacatatcttattcagcttcacagattac 152  Q
    ||||||| ||||||||||||||||||| |||||||||||||    
T  11185671 ataatcagcaacaacatatcttattcatcttcacagattac 11185711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 118
Target Start/End: Original strand, 35245644 - 35245758
Alignment:
Q  4 caacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattat 103  Q
    ||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||    
T  35245644 caacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataatcattat 35245743  T
Q  104 aacacttcataatca 118  Q
    | ||| |||||||||    
T  35245744 atcacatcataatca 35245758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 20361027 - 20360873
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-a 96  Q
    ||||||||||||||| ||||||   |||||||||||||| ||||||| | ||||||||||||||||||   || |||| ||||||||||||||||||| |    
T  20361027 cagcaacataggcagcatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgcatata 20360928  T
Q  97 acattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||||| ||| |||||||||||||||||| ||||||  |||||||||| ||||    
T  20360927 acattatatcacatcataatcaacaacaacacatcttaaacagcttcacatatta 20360873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 137 - 267
Target Start/End: Original strand, 19863171 - 19863301
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||  |||||||||||||||||||||||| |||||||||||||||||| || ||||| ||| |||||| ||| || | |||| |||    
T  19863171 cagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatctctaatcaaatgatgtgacacagatcgcaatatccttact 19863270  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||||| |||||| |||||||||||||||||    
T  19863271 tgcactcagttctggaagtgctcgcgaggcg 19863301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 137 - 267
Target Start/End: Original strand, 19873313 - 19873443
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||  |||||||||||||||||||||||| |||||||||||||||||| ||  |||| |||||||||| ||| || | |||| |||    
T  19873313 cagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatctctaataaaatgatgcgacacagatcgcaatatccttact 19873412  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||||| |||||| |||||||||||||||||    
T  19873413 tgcactcagttctggaagtgctcgcgaggcg 19873443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 81 - 267
Target Start/End: Complemental strand, 25642168 - 25641981
Alignment:
Q  81 ttcaagtaatgca--taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcatt 178  Q
    |||||||||||||  ||| ||||||| ||| ||||| ||||||  ||||| || ||  || ||||| ||||| ||  |||||||||||||||||||||||    
T  25642168 ttcaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataa-caacttcaaagattgcagttaacttcttatataggtctcatt 25642070  T
Q  179 attacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggcg 267  Q
    | |||||||||||||||||| || ||||| ||||||||||  || || | |||||||||||||| |||||| |||||||||||||||||    
T  25642069 actacccaagggtccatctctaatcaaattatgcgacacagttcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcg 25641981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 94 - 267
Target Start/End: Original strand, 22438951 - 22439123
Alignment:
Q  94 taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattacccaagggtcc 193  Q
    ||||| ||||| ||| ||||||||||||  ||||| || ||  |||||||||||||| ||  ||||||||||||||| |||||||| |||||||||||||    
T  22438951 taaactttatatcacatcataatcaacactaacatctcataa-cagcttcacagattgcagttaacttcttatatagatctcattactacccaagggtcc 22439049  T
Q  194 atctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggcg 267  Q
    ||||| || | ||| |||||||||| ||| || | | |||||||||||| |||| | |||||||||||||||||    
T  22439050 atctcaaatcgaattatgcgacacagatcgcaatattctcacttgcactcagttgtggaagtgctcgcgaggcg 22439123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 267
Target Start/End: Original strand, 22432443 - 22432573
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    ||||||||||||||  |  |||||||||||||||||||||||| |||||||||||||||||| || ||||| ||| |||||| ||| || | | || |||    
T  22432443 cagcttcacagattgtagttaacttcttatataggtctcattactacccaagggtccatctcaaatcaaataatgagacacagatcgcaatatactaact 22432542  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||||| |||||| |||||||||||||||||    
T  22432543 tgcactcagttctggaagtgctcgcgaggcg 22432573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 4 - 151
Target Start/End: Complemental strand, 20638347 - 20638196
Alignment:
Q  4 caacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaa-ca 99  Q
    |||||||||||||||||||   || ||||||||||| ||||||| | ||||| |||||||||||    || |||||||||||||||||||||||||| |     
T  20638347 caacataggcagtatacaaaaacaacatgacataataatatcaattgcaatttatcaacatctttaatattcaaacattcttcaagtaatgcataaaacg 20638248  T
Q  100 ttataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    ||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  20638247 ttatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 20638196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 267
Target Start/End: Complemental strand, 22334819 - 22334689
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||| ||||||| ||  |||||||||||||||||||||||  |||||| ||||||| ||| || ||||| |||||||||| ||| || | ||||||||    
T  22334819 cagctttacagattgcagttaacttcttatataggtctcattgctacccaggggtccaactctaatcaaattatgcgacacagatcgcaatatcctcact 22334720  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||| | |||||| |||||||||||||||||    
T  22334719 tgcattcagttctggaagtgctcgcgaggcg 22334689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 29060594 - 29060748
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-a 96  Q
    ||||||||||||||||||||||   || ||||||||||| ||||||||| ||| ||| |||||||| | | |||||  |||  ||||||||||||| | |    
T  29060594 cagcaacataggcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaagtatacattcataattcaagtaatgcacata 29060693  T
Q  97 acattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||||| | | |||||||||||| ||||| ||||||  |||||||||||||||    
T  29060694 acattatatctcatcataatcaacatcaacacatcttaaacagcttcacagatta 29060748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 137 - 265
Target Start/End: Complemental strand, 15894357 - 15894229
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    ||||||||||||||  |  |||| || |||||||||| ||||| |||||||||||||||||| |||||| | ||||||||||   | ||   | ||||||    
T  15894357 cagcttcacagattgtagttaacatcctatataggtcacattactacccaagggtccatctctaaacaagttatgcgacacaggacgcaaagttctcact 15894258  T
Q  237 tgcactaagttctagaagtgctcgcgagg 265  Q
    |||||| |||||| |||||||||||||||    
T  15894257 tgcactcagttctggaagtgctcgcgagg 15894229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 20593827 - 20593981
Alignment:
Q  1 cagcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-a 96  Q
    |||||||| | |||||||||   |||||||||||||||| ||||||||| ||| ||| |||||||| |   |||||| |||   ||||||||||| || |    
T  20593827 cagcaacacatgcagtatacgaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaattatacaatcataaatcaagtaatgcgtata 20593926  T
Q  97 acattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    ||| |||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  20593927 acaatatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 20593981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 151
Target Start/End: Complemental strand, 25629399 - 25629268
Alignment:
Q  21 aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattataacacttcataatcaa 119  Q
    |||||||||||||||  ||||||||| ||| ||| |||||||| |   |||||  |||  |||||||||||| || ||||||||| ||| ||||||||||    
T  25629399 aacagcatgacataacaatatcaaatgcaagtcaacaacatctcaattatacattcataattcaagtaatgcgtataacattatatcacatcataatcaa 25629300  T
Q  120 caacaacatatcttattcagcttcacagatta 151  Q
    || ||||| ||||||  |||||||||||||||    
T  25629299 catcaacacatcttaaacagcttcacagatta 25629268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 267
Target Start/End: Complemental strand, 21739950 - 21739820
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||| |||| || |||||||||| ||||| |||| ||| ||||||| | |||||| ||||| |||||| ||| ||   | |||| |    
T  21739950 cagcttcacagattgcaattaacatcctatataggtcacattactacctaagagtccatccctaaacaactcatgtgacacagatcgcaacattctcaat 21739851  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    || ||| |||||| |||||||||||||||||    
T  21739850 tgtactcagttctggaagtgctcgcgaggcg 21739820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 267
Target Start/End: Complemental strand, 16924776 - 16924677
Alignment:
Q  168 taggtctcattattacccaagggtccatctccaaa-caaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggc 266  Q
    |||||||||||| |||||| ||||||| |||| || |||| ||||||||||| ||| ||||   |||||||||||| |||||| ||||||||||||||||    
T  16924776 taggtctcattactacccaggggtcca-ctcctaatcaaagcatgcgacacagatcgcattaaactcacttgcactcagttctggaagtgctcgcgaggc 16924678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 18409894 - 18409740
Alignment:
Q  1 cagcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-a 96  Q
    |||||||| |||||||||||   |||| ||||||||||| ||||||||| ||| ||| |||||||| |  ||| ||  |||  ||||| |||| |||| |    
T  18409894 cagcaacacaggcagtatacgaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaatcatccattcataattcaaataatacatata 18409795  T
Q  97 acattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||||| ||| |||||||||||| ||||| ||||||  |||||||||| ||||    
T  18409794 acattatatcacatcataatcaacatcaacacatcttaaacagcttcacatatta 18409740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 267
Target Start/End: Original strand, 18907299 - 18907429
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||| ||| ||  |||| ||||| ||||||| ||||| |||| ||||||||||| | || ||| |||||||||||| ||| ||   | |||| |    
T  18907299 cagcttcacatattgcagttaacatcttaaataggtcacattactacctaagggtccatccctaatcaattcatgcgacacagatcgcaacattctcatt 18907398  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    ||||||  ||||| |||||||||||||||||    
T  18907399 tgcactctgttctggaagtgctcgcgaggcg 18907429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 16496298 - 16496365
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatctta 65  Q
    ||||||||||||||||||||||   |||||||||||||| ||||||| | ||||||| ||||||||||    
T  16496298 cagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaacatctta 16496365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 203 - 267
Target Start/End: Complemental strand, 16965172 - 16965108
Alignment:
Q  203 caaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||| ||||||||||| ||||||||   ||||||||||||||||||| |||||||||| ||||||    
T  16965172 caaagcatgcgacacagatcacattaaactcacttgcactaagttctggaagtgctcgtgaggcg 16965108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 27416006 - 27415942
Alignment:
Q  1 cagcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatctt 64  Q
    ||||||||||||||| |||||| ||||||||||||||  |||||| ||||||||| |||||||||    
T  27416006 cagcaacataggcagcatacaaacagcatgacataatattatcaatttcaattcaacaacatctt 27415942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 151
Target Start/End: Complemental strand, 19303585 - 19303454
Alignment:
Q  21 aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattataacacttcataatcaa 119  Q
    |||| ||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |||  ||||||||||| | | ||||||||| ||| ||||||||||    
T  19303585 aacaacatgacataataatatcaaatgcaagtcaacaacatctcaattatacattcatatttcaagtaatgtacataacattatatcacatcataatcaa 19303486  T
Q  120 caacaacatatcttattcagcttcacagatta 151  Q
    || ||||| |||||   |||||||||||||||    
T  19303485 catcaacacatcttcaacagcttcacagatta 19303454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 266
Target Start/End: Complemental strand, 31164744 - 31164646
Alignment:
Q  168 taggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggc 266  Q
    ||||||||| || |||||| ||||||||||| || |||| |||||||||||  || ||||   |||||||||||| | |||| ||||| ||||||||||    
T  31164744 taggtctcactactacccaggggtccatctctaatcaaaacatgcgacacaggtcgcattaaactcacttgcactcaattctggaagtactcgcgaggc 31164646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 267
Target Start/End: Complemental strand, 15041596 - 15041348
Alignment:
Q  19 acaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaa-acattcttcaagtaatgcataaacattataacacttcataatc 117  Q
    ||||||||||||||| || ||||||||| |||||||  ||||||||| | || ||| | | ||| ||||||||||| | |||||| | ||  || ||||     
T  15041596 acaacagcatgacattataatatcaaatgcaattcaataacatcttaagtattcaataaaatct-caagtaatgcacatacattaaaccaaatcttaatt 15041498  T
Q  118 aacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacac 217  Q
    | || ||||| ||||||  |||||| |||||||  |  |||| || |   |||||||||||| |||||| ||||||||||| || |||| ||||||| ||    
T  15041497 atcatcaacacatcttaaacagctttacagattgtatctaacatcatcattaggtctcattactacccaggggtccatctctaatcaaaacatgcgatac 15041398  T
Q  218 aaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggcg 267  Q
    | ||| | ||   |||||||||||| | |||| |||||| | ||||||||    
T  15041397 agatcgcgttaaactcacttgcactcaattctggaagtggttgcgaggcg 15041348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 151
Target Start/End: Complemental strand, 22780290 - 22780140
Alignment:
Q  5 aacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacat 100  Q
    |||||||||| |||||||   |||| ||||||||| ||||||| | ||| ||| || |||||||   || |||  || ||||||||||||||   |||||    
T  22780290 aacataggcaatatacaaaaacagcttgacataataatatcaattgcaagtcaacatcatcttaaatattcaattatacttcaagtaatgcacgcaacat 22780191  T
Q  101 tataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||| |||  ||||||||||| ||||| ||||||  |||||||||||||||    
T  22780190 tatatcacaacataatcaacatcaacacatcttaaacagcttcacagatta 22780140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 267
Target Start/End: Complemental strand, 21834818 - 21834688
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||  |||| ||||| |||||||  |||| |||  ||||||||||| | || ||| | |||||| ||| ||| ||   |||| |||    
T  21834818 cagcttcacagatttcagttaacatcttaaataggtcagattactactgaagggtccatccctaatcaatttatgcgaaacagatcgcaacatcctaact 21834719  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||| | |||||| |||||||||||||||||    
T  21834718 tgcattcagttctggaagtgctcgcgaggcg 21834688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 20076754 - 20076817
Alignment:
Q  1 cagcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatctta 65  Q
    ||||||||||||||||| ||||  |||||||||||||| ||||||||| |||   ||||||||||||    
T  20076754 cagcaacataggcagtaaacaaaacagcatgacataataatatcaaatgcaa---atcaacatctta 20076817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 17287863 - 17287713
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-a 96  Q
    |||||||||||| |||||||||   |||||||||||||| ||||||| | ||| ||| || |||||||   || |||  || |||||||||||||| | |    
T  17287863 cagcaacataggtagtatacaaacacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaattatacttcaagtaatgcacata 17287764  T
Q  97 acattataacacttcataatcaacaacaacatatcttattcagcttcacag 147  Q
    |||||||  ||   ||||||||||  ||||| ||||||  |||||||||||    
T  17287763 acattatgtcataacataatcaacctcaacacatcttaaacagcttcacag 17287713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 4 - 151
Target Start/End: Complemental strand, 5191 - 5044
Alignment:
Q  4 caacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattat 103  Q
    ||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  5191 caacataggtattatacaacatcatgacataattatatcaaattcaattcatcaacatcttatgtatacaaacattcttcaagtaatgtataaacattat 5092  T
Q  104 aacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    ||||| || |||||||||||||||||| |||||||| |||||| ||||    
T  5091 aacacatcttaatcaacaacaacatattttattcagtttcacatatta 5044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 107; Significance: 1e-53; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 38801454 - 38801304
Alignment:
Q  1 cagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacat 100  Q
    |||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||| ||||  ||||||  ||||||||||||||||||||||||    
T  38801454 cagcaacataggcagtgtgcaacagcaagacataattatatcaaattcaattcatcaacatattatatatacaattattcttcaagtaatgcataaacat 38801355  T
Q  101 tataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||||| || |||||||||||||||||||||||||||||||||| ||||    
T  38801354 tataacacatcgtaatcaacaacaacatatcttattcagcttcacaaatta 38801304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 81 - 267
Target Start/End: Original strand, 21714684 - 21714871
Alignment:
Q  81 ttcaagtaatgca--taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcatt 178  Q
    |||||||||||||  ||||||||||| ||| ||||| ||||||  ||||| || ||  |||||||||||||| ||  |||||||||||||||||||||||    
T  21714684 ttcaagtaatgcaattaaacattatatcacatcatattcaacactaacatctcataa-cagcttcacagattgcagttaacttcttatataggtctcatt 21714782  T
Q  179 attacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggcg 267  Q
    | |||||||||||||||||| || |||||||||||||||| ||| ||||||||||||||||||| |||||| |||||||||||||||||    
T  21714783 actacccaagggtccatctctaatcaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcg 21714871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 2 - 164
Target Start/End: Complemental strand, 27250795 - 27250629
Alignment:
Q  2 agcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcat-aaa 97  Q
    |||||||||||||||||||||   |||||||||||||| ||||||| | ||||||||||||||||||   || |||| ||| |||||||||||||| |||    
T  27250795 agcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatattattcaagtaatgcataaaa 27250696  T
Q  98 cattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 164  Q
    ||||||| ||| |||||||||||||||||| ||||||  ||||||||||||||| || |||| ||||    
T  27250695 cattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacctctt 27250629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 137 - 265
Target Start/End: Complemental strand, 20091401 - 20091273
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||  |||||||||| ||||||||||||| |||||||||||||||||| || ||||| |||||||||| ||| || | |||||| |    
T  20091401 cagcttcacagattgcagttaacttcttaaataggtctcattactacccaagggtccatctcaaatcaaattatgcgacacagatcgcaatatcctcatt 20091302  T
Q  237 tgcactaagttctagaagtgctcgcgagg 265  Q
    |||||| |||||| |||||||||||||||    
T  20091301 tgcactcagttctggaagtgctcgcgagg 20091273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 82 - 249
Target Start/End: Original strand, 48603652 - 48603820
Alignment:
Q  82 tcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattat 180  Q
    |||||||||||||||| ||||||| ||| |||||||||||||||||| ||||||  ||||||||||||||| || |||||||||||||||||| || ||     
T  48603652 tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacttcttatataggtcacaatac 48603751  T
Q  181 tacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttct 249  Q
    |||| | ||||||||||| || ||| |||||| ||||| ||| ||   |||| ||||||||| ||||||    
T  48603752 tacctaggggtccatctctaatcaattcatgcaacacagatcgcaacatcctaacttgcactcagttct 48603820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 137 - 267
Target Start/End: Complemental strand, 42865139 - 42865009
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||  |||| ||||||||||||| ||||| |||||||||||||||||| || ||||| |||||||||| ||| ||   ||||||||    
T  42865139 cagcttcacagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaacatcctcact 42865040  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||||| |||||| |||||||||||||||||    
T  42865039 tgcactcagttctggaagtgctcgcgaggcg 42865009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 151
Target Start/End: Complemental strand, 22354616 - 22354485
Alignment:
Q  21 aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattataacacttcataatcaa 119  Q
    |||||||||||||||  ||||||| | ||||||||||||||||||   || |||| ||||||||||||||| ||| ||||||||| ||| ||||||||||    
T  22354616 aacagcatgacataaaaatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgtatataacattatatcacatcataatcaa 22354517  T
Q  120 caacaacatatcttattcagcttcacagatta 151  Q
    || ||||| ||||||  |||||||||||||||    
T  22354516 catcaacacatcttaaacagcttcacagatta 22354485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 267
Target Start/End: Complemental strand, 21788088 - 21787840
Alignment:
Q  19 acaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacat-tcttcaagtaatgcata-aacattataacacttcataat 116  Q
    ||||||||||||| |  | ||||||| |||| |||| ||||||||||  ||| |||  || |||| |||||||||| | |||||||||  || |||||||    
T  21788088 acaacagcatgacttcgtaatatcaatttcatttcaacaacatcttaatcattcaataatatctt-aagtaatgcacataacattatataacatcataat 21787990  T
Q  117 caacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgaca 216  Q
    ||||| |||||| || ||  ||||| || ||||| ||  |||||||||||||||||  ||||| |||||||||||||||||| |||||| | ||||||||    
T  21787989 caacatcaacatttcataa-cagctgcatagattgcagttaacttcttatataggttacattactacccaagggtccatctctaaacaagttatgcgaca 21787891  T
Q  217 caaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggcg 267  Q
    ||  || ||  || |||||||||||| ||||||  ||||||||||||||||    
T  21787890 caggtcgcaaatttctcacttgcactcagttctgaaagtgctcgcgaggcg 21787840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 267
Target Start/End: Complemental strand, 22468742 - 22468494
Alignment:
Q  19 acaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattataacacttcataatc 117  Q
    ||||||||||||||| || ||||||| | ||||||| ||||||||||   || |||  ||   |||||||||||| | ||||||||| ||| |||||||     
T  22468742 acaacagcatgacatcataatatcaattgcaattcaacaacatcttaattattcaataatatctcaagtaatgcacataacattatatcacatcataatt 22468643  T
Q  118 aacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacac 217  Q
    | || || || ||||||  ||||||||||||||| || || |  |||  | |||||||| || |||||||||||||||||| || | ||| |||||||||    
T  22468642 a-catcagcacatcttaaacagcttcacagattataattaccaacttcaaaaggtctcaatactacccaagggtccatctctaatcgaattatgcgacac 22468544  T
Q  218 aaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggcg 267  Q
    | ||| || |  ||||||||||||| |||||| |||||||||||||||||    
T  22468543 atatcgcaataccctcacttgcactcagttctggaagtgctcgcgaggcg 22468494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 21026734 - 21026901
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaa 97  Q
    |||||| |||||||||||||||   ||||||||| ||| |||||||| | ||||||| ||||||||||   || |||| | |  ||||||||||||||||    
T  21026734 cagcaatataggcagtatacaaaatcagcatgacgtaaatatatcaattgcaattcaacaacatcttaaatattcaaataattctcaagtaatgcataaa 21026833  T
Q  98 -cattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 164  Q
     ||||||| ||| |||||||||||| ||||| ||||||  ||||||||||||||| || |||| ||||    
T  21026834 acattatatcacatcataatcaacagcaacacatcttaaacagcttcacagattataattaacctctt 21026901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 50210280 - 50210126
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-a 96  Q
    ||||||||||||||||||||||   || ||||||||||| ||||||||| ||| ||| |||||||| | | |||||  |||  |||||||||||| |  |    
T  50210280 cagcaacataggcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaagtatacattcataattcaagtaatgcgttta 50210181  T
Q  97 acattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  50210180 acattatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 50210126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 22532323 - 22532473
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-a 96  Q
    ||||||||||||||||||||||   |||||||||||||| ||||| | | ||||||| ||||||||||   || ||  |||  ||||||||||||| | |    
T  22532323 cagcaacataggcagtatacaaaaacagcatgacataataatatccattgcaattcaacaacatcttaaatattcattcataattcaagtaatgcacata 22532422  T
Q  97 acattataacacttcataatcaacaacaacatatcttattcagcttcacag 147  Q
    |||||||| ||| |||||||||||| ||||| ||||||  |||||||||||    
T  22532423 acattatatcacatcataatcaacatcaacacatcttaaacagcttcacag 22532473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 34509834 - 34509988
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-a 96  Q
    ||||||||||||||||||||||   |||||||||||||| ||||||||| ||| ||| ||||||||||   |||||  |||   ||||||||||| || |    
T  34509834 cagcaacataggcagtatacaaaaacagcatgacataatgatatcaaatgcaagtcaacaacatcttaattatacattcatatctcaagtaatgcttata 34509933  T
Q  97 acattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||||| ||| ||||| |||||| ||||| ||||||  |||||||| ||||||    
T  34509934 acattatatcacatcatattcaacatcaacacatcttaaacagcttcaaagatta 34509988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 137 - 267
Target Start/End: Complemental strand, 22831306 - 22831176
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||| |||| || |||||||||| ||||| |||| ||| ||||||| | |||||| |||||||||||| ||| ||   | |||| |    
T  22831306 cagcttcacagattgcaattaacatcctatataggtcacattactacctaagagtccatccctaaacaagtcatgcgacacagatcgcaacattctcaat 22831207  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||||| |||||  |||||||||||||||||    
T  22831206 tgcactcagttcaggaagtgctcgcgaggcg 22831176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 267
Target Start/End: Original strand, 6152046 - 6152176
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||| |||| || |||||||||| ||||| |||| ||| ||||||| | || ||| |||||||||||| ||| ||   |||| ||     
T  6152046 cagcttcacagattgcaattaacatcctatataggtcacattactacctaagagtccatccctaatcaattcatgcgacacagatcgcaacatcctaaca 6152145  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||| | |||||| |||||||||||||||||    
T  6152146 tgcattcagttctggaagtgctcgcgaggcg 6152176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 151
Target Start/End: Original strand, 20135262 - 20135395
Alignment:
Q  19 acaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattataacacttcataatc 117  Q
    |||||| ||||||||||| ||||||  | ||||||| |||||||||| | || |||  |  |||||||||||||||| ||||||||| ||  |||||||     
T  20135262 acaacatcatgacataataatatcatgtgcaattcaacaacatcttaagtattcaataaaacttcaagtaatgcatacaacattatatcatatcataatg 20135361  T
Q  118 aacaacaacatatcttattcagcttcacagatta 151  Q
    |||| ||||| ||||||  |||||||||||||||    
T  20135362 aacatcaacacatcttaaacagcttcacagatta 20135395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 267
Target Start/End: Original strand, 21022830 - 21022959
Alignment:
Q  138 agcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcactt 237  Q
    ||||||||||||| ||  |||| ||||||||||||| ||||| |||| |||||||||||   || ||||||| || ||||| |||||    | ||||||     
T  21022830 agcttcacagattgcagttaacatcttatataggtcacattactacctaagggtccatccttaatcaaatcaagcaacacagatcacgacattctcacta 21022929  T
Q  238 gcactaagttctagaagtgctcgcgaggcg 267  Q
    | ||| |||||| |||||||||||||||||    
T  21022930 gtactgagttctggaagtgctcgcgaggcg 21022959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 267
Target Start/End: Complemental strand, 18182049 - 18181919
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    ||||||||||| || ||  |||||||||||| | ||| ||||| |||| ||| ||||||| | || ||| | |||||||||| ||| ||   |||| |||    
T  18182049 cagcttcacagtttgcagttaacttcttatacaagtcacattactacctaagagtccatccctaatcaatttatgcgacacagatcgcaacatcctaact 18181950  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||||| |||||| ||||||||||| |||||    
T  18181949 tgcactcagttctggaagtgctcgcaaggcg 18181919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 21896322 - 21896258
Alignment:
Q  1 cagcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatct 63  Q
    ||||||||||||||||||||||  |||||||| ||||  ||||||||| ||| ||||||||||||    
T  21896322 cagcaacataggcagtatacaaaacagcatgatataacaatatcaaatgcaagtcatcaacatct 21896258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 151
Target Start/End: Complemental strand, 22356168 - 22356087
Alignment:
Q  72 caaacattcttcaagtaatgcata-aacattataacacttcataatcaa-caacaacatatcttattcagcttcacagatta 151  Q
    |||||||||||||||||||||| | ||||||||| ||| |||||||||| || ||||| ||||||   ||||||||||||||    
T  22356168 caaacattcttcaagtaatgcacataacattatatcacatcataatcaatcatcaacacatcttaaatagcttcacagatta 22356087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 151
Target Start/End: Complemental strand, 22357854 - 22357773
Alignment:
Q  72 caaacattcttcaagtaatgcata-aacattataacacttcataatcaa-caacaacatatcttattcagcttcacagatta 151  Q
    |||||||||||||||||||||| | ||||||||| ||| |||||||||| || ||||| ||||||   ||||||||||||||    
T  22357854 caaacattcttcaagtaatgcacataacattatatcacatcataatcaatcatcaacacatcttaaatagcttcacagatta 22357773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 33797575 - 33797639
Alignment:
Q  1 cagcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatctt 64  Q
    |||||||||| |||| |||||| || ||||||||||| ||||||| ||||||||| |||||||||    
T  33797575 cagcaacatatgcagcatacaaacaacatgacataataatatcaatttcaattcaacaacatctt 33797639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 21861636 - 21861572
Alignment:
Q  1 cagcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatct 63  Q
    |||||||||||||||||| |||  |||||||| ||||  ||||||||| ||| ||||||||||||    
T  21861636 cagcaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaagtcatcaacatct 21861572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 10489 - 10339
Alignment:
Q  1 cagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacat 100  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | ||||||| |||||||||||||||||||| |||    
T  10489 cagcaacataggcagtatacaacagcatgacataataatatcaatttcaattcaacaacatcttaagtatacaaatattcttcaagtaatgcataatcat 10390  T
Q  101 tataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||| ||| ||||||||| |||| ||||||||||| |||||||||||||||    
T  10389 tatatcacatcataatcatcaacgacatatcttatacagcttcacagatta 10339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 13551 - 13703
Alignment:
Q  1 cagcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaac 98  Q
    ||||||||||||||||||||||  || |||||||| || ||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  13551 cagcaacataggcagtatacaaaacaacatgacatgataatatcaatttcgattcatcaacatcttatgtatacaaacattcttcaagtaatgcataaac 13650  T
Q  99 attataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||| ||| |||||||||||||| ||||||||||| |||||||||||||||    
T  13651 attatatcacatcataatcaacaacgacatatcttatacagcttcacagatta 13703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 32121 - 32272
Alignment:
Q  1 cagcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaaca 99  Q
    ||||||||||||||||| |||| || ||||||||||| ||||||| |||||||||||||||||||| | ||||||| |||||||||||||||||||||||    
T  32121 cagcaacataggcagtaaacaaacaacatgacataataatatcaatttcaattcatcaacatcttaggtatacaaatattcttcaagtaatgcataaaca 32220  T
Q  100 ttataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    ||||| ||| |||||||||||||| ||||||||||| |||||||||||||||    
T  32221 ttatatcacatcataatcaacaacgacatatcttatacagcttcacagatta 32272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 4 - 151
Target Start/End: Original strand, 47053 - 47200
Alignment:
Q  4 caacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattat 103  Q
    ||||||||||||| |||| |||||||||||||| ||||||| |||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||    
T  47053 caacataggcagtttacagcagcatgacataataatatcaatttcaattcatcaacatcttatgtatacaaatattctccaagtaatgcataaacattat 47152  T
Q  104 aacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    | ||| |||||| || |||||||||||||||| |||||||||||||||    
T  47153 atcacatcataaacatcaacaacatatcttatacagcttcacagatta 47200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 97; Significance: 9e-48; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 2 - 151
Target Start/End: Complemental strand, 15529 - 15378
Alignment:
Q  2 agcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaaca 99  Q
    |||||||||||||||||||||  || ||||||||||| ||||||| |||||||||||||||||||||| ||| ||| ||||||||||||||||||||| |    
T  15529 agcaacataggcagtatacaaaacaacatgacataataatatcaatttcaattcatcaacatcttatgtataaaaatattcttcaagtaatgcataaata 15430  T
Q  100 ttataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    ||||| ||| ||||||||| |||||||||||||||| |||||||||||||||    
T  15429 ttatatcacatcataatcatcaacaacatatcttatacagcttcacagatta 15378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 32 - 267
Target Start/End: Original strand, 7378 - 7611
Alignment:
Q  32 ataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatc 131  Q
    ||||||||| |||||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||| || ||||| |||||   ||||| ||    
T  7378 ataattata-caaattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaacgcaaacatctc 7476  T
Q  132 ttattcagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcc 231  Q
     || |||| |||| ||||| ||  |||||||||||||||||||||||| |||| ||||||||||| | || ||| ||| || | |||||||||    | |    
T  7477 ata-tcagtttcatagattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaattcaagcaatacaaatcactacattc 7575  T
Q  232 tcacttgcactaagttctagaagtgctcgcgaggcg 267  Q
    ||||||||||| |||| | |||||||||||||||||    
T  7576 tcacttgcactcagttttggaagtgctcgcgaggcg 7611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 81 - 267
Target Start/End: Original strand, 36592 - 36779
Alignment:
Q  81 ttcaagtaatgca--taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcatt 178  Q
    |||||||||||||  ||||||||||| ||| ||||| ||||||  ||||| || ||  |||||||||||||| ||  |||||||||| ||||||||||||    
T  36592 ttcaagtaatgcaattaaacattatatcacatcatattcaacactaacatctcataa-cagcttcacagattgcagttaacttcttaaataggtctcatt 36690  T
Q  179 attacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggcg 267  Q
    | ||||||||||||| |||| ||||||||||||||||||| |||  |||||||||||||||||| ||||||||||||||||||||||||    
T  36691 actacccaagggtccttctctaaacaaatcatgcgacacagatcgtattttcctcacttgcactcagttctagaagtgctcgcgaggcg 36779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1124 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 44 - 267
Target Start/End: Original strand, 1975 - 2197
Alignment:
Q  44 aattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttc 143  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||| || |||||  ||||   ||||| || || ||||||||    
T  1975 aattcaattcatcaacatcttatgtatacaattattcttcaagtaatgcataaacattataatacatcatatccaacgcaaacatctcata-tcagcttc 2073  T
Q  144 acagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcacta 243  Q
    ||||||| ||  |||||||||||||||||||||||| |||| ||||||||||| | || ||| ||| || ||||| |||| |   | ||||||||||||     
T  2074 acagattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaattcaagcaacacagatcataacattctcacttgcactc 2173  T
Q  244 agttctagaagtgctcgcgaggcg 267  Q
    |||||| |||||||||||||||||    
T  2174 agttctcgaagtgctcgcgaggcg 2197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 92; Significance: 9e-45; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 44 - 267
Target Start/End: Complemental strand, 21826 - 21604
Alignment:
Q  44 aattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttc 143  Q
    |||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||| || || |||||||||  ||||| || ||  |||||||    
T  21826 aattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcttaatcaacacaaacatctcataa-cagcttc 21728  T
Q  144 acagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcacta 243  Q
    ||||||| ||  |||| ||||||||||||||||||| |||| ||||||||||| | || ||| ||| || ||||| ||||||   | ||||||||||||     
T  21727 acagattgcagttaacatcttatataggtctcattactacctaagggtccatccctaaccaattcaagcaacacagatcacaacattctcacttgcactc 21628  T
Q  244 agttctagaagtgctcgcgaggcg 267  Q
    |||||| |||||||||||||||||    
T  21627 agttctggaagtgctcgcgaggcg 21604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 44 - 267
Target Start/End: Complemental strand, 29718 - 29496
Alignment:
Q  44 aattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttc 143  Q
    |||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||| || || |||||||||  ||||| || ||  |||||||    
T  29718 aattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcttaatcaacacaaacatctcataa-cagcttc 29620  T
Q  144 acagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcacta 243  Q
    ||||||| ||  |||| ||||||||||||||||||| |||| ||||||||||| | || ||| ||| || ||||| ||||||   | ||||||||||||     
T  29619 acagattgcagttaacatcttatataggtctcattactacctaagggtccatccctaaccaattcaagcaacacagatcacaacattctcacttgcactc 29520  T
Q  244 agttctagaagtgctcgcgaggcg 267  Q
    |||||| |||||||||||||||||    
T  29519 agttctggaagtgctcgcgaggcg 29496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 89; Significance: 6e-43; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 4 - 151
Target Start/End: Original strand, 4769 - 4919
Alignment:
Q  4 caacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacat 100  Q
    |||||||||||||||||||   ||||||||||||| || ||||| | ||||||||||| |||||||| ||||||| ||||||||||||| ||||||||||    
T  4769 caacataggcagtatacaaaaacagcatgacataaatacatcaattgcaattcatcaaaatcttatgtatacaaatattcttcaagtaaggcataaacat 4868  T
Q  101 tataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||| ||| |||||||||||||||||||||||||| || ||||||||||||    
T  4869 tatatcacatcataatcaacaacaacatatcttatacaacttcacagatta 4919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 21 - 151
Target Start/End: Original strand, 13 - 143
Alignment:
Q  21 aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattataacacttcataatcaac 120  Q
    ||||||||||||||| || ||||| | ||||||||||| |||||||| ||||||| ||||||||||||| |||||||||||||| ||| |||||||||||    
T  13 aacagcatgacataaatacatcaattgcaattcatcaaaatcttatgtatacaaatattcttcaagtaaggcataaacattatatcacatcataatcaac 112  T
Q  121 aacaacatatcttattcagcttcacagatta 151  Q
    ||||||||||||||| || ||||||||||||    
T  113 aacaacatatcttatacaacttcacagatta 143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 44 - 267
Target Start/End: Original strand, 12857 - 13079
Alignment:
Q  44 aattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttc 143  Q
    |||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||| || |||||||||||  |||||| || |||| ||||||    
T  12857 aattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcataatcaactccaacatctcatatt-agcttc 12955  T
Q  144 acagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcacta 243  Q
    ||| ||| ||  |||||||||||||||||||||||| |||| |||||||||||   || ||| ||| || || || ||||||   | |||| |||||||     
T  12956 acaaattgcagttaacttcttatataggtctcattactacctaagggtccatccataatcaattcaagcaactcatatcacaacattctcatttgcactc 13055  T
Q  244 agttctagaagtgctcgcgaggcg 267  Q
    |||||| |||||||||||||||||    
T  13056 agttctggaagtgctcgcgaggcg 13079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 81 - 267
Target Start/End: Original strand, 20117 - 20304
Alignment:
Q  81 ttcaagtaatgca--taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcatt 178  Q
    |||||||||||||  ||||||||||| ||| ||||| ||||||  ||||| || ||  ||||||||||| || ||  |||||||||||||||||||||||    
T  20117 ttcaagtaatgcaattaaacattatatcacatcatattcaacactaacatctcataa-cagcttcacaggttgcagttaacttcttatataggtctcatt 20215  T
Q  179 attacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggcg 267  Q
    | |||||||||||||||| | || |||||||||||||||| || ||||| |||||||||||||| |||||| |||||||||||||||||    
T  20216 actacccaagggtccatccctaatcaaatcatgcgacacagattacattatcctcacttgcactcagttctggaagtgctcgcgaggcg 20304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 5e-40; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 44 - 267
Target Start/End: Original strand, 856234 - 856456
Alignment:
Q  44 aattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttc 143  Q
    ||||||||||| |||||||||||| ||||||  | |||||||||||| |||||||||||||| || ||||| || |||  ||||| || |||  ||||||    
T  856234 aattcaattcaacaacatcttatgtatacaattaatcttcaagtaatacataaacattataatacatcatattcgacacaaacatctcatata-agcttc 856332  T
Q  144 acagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcacta 243  Q
    ||||||| ||  |||||||||||||||||||||||| |||| ||||||||||| | || ||| ||| || ||||| ||||||   | ||||||||||||     
T  856333 acagattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaattcaagcaacacagatcacaacattctcacttgcactc 856432  T
Q  244 agttctagaagtgctcgcgaggcg 267  Q
    |||||| |||||||||||||||||    
T  856433 agttctggaagtgctcgcgaggcg 856456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 20698502 - 20698349
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaa 97  Q
    ||||||||||||||||||||||   ||||||||| |||| ||||||| | |||||||||||||||||||  || |||| |||||||||||||||||||||    
T  20698502 cagcaacataggcagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttatatattcaaatattcttcaagtaatgcataaa 20698403  T
Q  98 cattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    ||||||| ||| |||||||||||  ||||| |||||   |||||||||||||||    
T  20698402 cattatatcacatcataatcaacttcaacacatcttgaacagcttcacagatta 20698349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 137 - 266
Target Start/End: Complemental strand, 17525080 - 17524951
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||  |||||||||||||||||| ||||| |||||||||||||||||| || ||||| |||||||||| ||| || | ||||||||    
T  17525080 cagcttcacagattgcagttaacttcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcact 17524981  T
Q  237 tgcactaagttctagaagtgctcgcgaggc 266  Q
    |||||| |||| | ||||||||||||||||    
T  17524980 tgcactcagttttggaagtgctcgcgaggc 17524951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 3 - 151
Target Start/End: Original strand, 13442330 - 13442482
Alignment:
Q  3 gcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aac 98  Q
    ||||||||||||||||||||   || ||||||||||| ||||||| | ||||||||||||||||||   || |||| ||||||||||||||||| | |||    
T  13442330 gcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgcacataac 13442429  T
Q  99 attataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  13442430 attatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 13442482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 82 - 198
Target Start/End: Original strand, 14179570 - 14179687
Alignment:
Q  82 tcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattat 180  Q
    |||||||||||||||| ||||||| ||| |||||||||||||||||| ||||||  ||||||||||||||| || |||||||||||||||||| || ||     
T  14179570 tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacttcttatataggtcacaatac 14179669  T
Q  181 tacccaagggtccatctc 198  Q
    |||||| |||||||||||    
T  14179670 tacccaggggtccatctc 14179687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 94 - 267
Target Start/End: Original strand, 23408581 - 23408753
Alignment:
Q  94 taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattacccaagggtcc 193  Q
    ||||||||||| ||| ||||| ||||||  ||||| || ||  |||||||||||||| ||  |||||||| | ||||||  || || |||||||||||||    
T  23408581 taaacattatatcacatcatattcaacactaacatctcataa-cagcttcacagattgcagttaacttctaaaataggtaacaatactacccaagggtcc 23408679  T
Q  194 atctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggcg 267  Q
    ||||| || ||||| |||||||||| ||| || | ||||||||||||||||||||| |||||||||||||||||    
T  23408680 atctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactaagttctggaagtgctcgcgaggcg 23408753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 12399263 - 12399417
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataa- 96  Q
    ||||||||||||||||||||||   |||||||||||||| ||||||||| ||||||| ||||||||||   || |||| | |  |||||||||||||||     
T  12399263 cagcaacataggcagtatacaaaatcagcatgacataataatatcaaatgcaattcaacaacatcttaaatattcaaataattctcaagtaatgcataag 12399362  T
Q  97 acattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||||| ||| |||||||||||||||||| ||||||   ||||||||||||||    
T  12399363 acattatatcacatcataatcaacaacaacacatcttaaatagcttcacagatta 12399417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 17487910 - 17488064
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-a 96  Q
    |||||| |||| ||||||||||   |||||||||||||| ||||||| | ||||||||||||||||||   || |||| ||||||||||||||||||| |    
T  17487910 cagcaaaatagacagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgcatata 17488009  T
Q  97 acattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||||| ||| |||||||||||| ||||| ||||||  ||| |||||||||||    
T  17488010 acattatatcacatcataatcaacatcaacacatcttaaacagattcacagatta 17488064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 166 - 267
Target Start/End: Complemental strand, 15877727 - 15877626
Alignment:
Q  166 tataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgagg 265  Q
    |||||||||||||| |||||||||||||||||| || ||||| |||||||||  ||| || | |||||||||||||| |||||| |||||||||||||||    
T  15877727 tataggtctcattactacccaagggtccatctctaatcaaattatgcgacactgatcgcaatatcctcacttgcactcagttctggaagtgctcgcgagg 15877628  T
Q  266 cg 267  Q
    ||    
T  15877627 cg 15877626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 14972908 - 14973062
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-a 96  Q
    |||||||| |||||||||||||   |||||||||||||| ||||||||| ||| ||| |||||||| ||  |||||  |||  ||||||||||||||| |    
T  14972908 cagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacatctcatatatacattcataattcaagtaatgcatata 14973007  T
Q  97 acattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||||| ||| |||||||||||| ||||| ||||||  |||||||| ||||||    
T  14973008 acattatatcacatcataatcaacatcaacacatcttaaacagcttcatagatta 14973062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 17499392 - 17499546
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-a 96  Q
    |||||| |||| ||||||||||   |||||||||||||| ||||||| | ||||||||||||||||||   || |||| ||||||||||||||||||| |    
T  17499392 cagcaaaatagacagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgcatata 17499491  T
Q  97 acattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||||| ||| ||| |||||||| ||||| ||||||  ||| |||||| ||||    
T  17499492 acattatatcacatcaaaatcaacatcaacacatcttaaacagattcacaaatta 17499546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 14576899 - 14576746
Alignment:
Q  1 cagcaacataggcagtata--caacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aa 97  Q
    ||||||||||| |||||||  ||||||||||||||||| ||||||| | ||| ||| ||||||||||   || |||  || |||||||||||||||| ||    
T  14576899 cagcaacatagacagtataaacaacagcatgacataataatatcaattgcaagtcaacaacatcttaaatattcaattatacttcaagtaatgcatataa 14576800  T
Q  98 cattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    ||||||| ||| |||||||||||| ||||| ||||||  || ||||||||||||    
T  14576799 cattatatcacatcataatcaacatcaacacatcttaaacaacttcacagatta 14576746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 18438588 - 18438742
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-a 96  Q
    ||||||||||||||||||||||   |||||||| ||||| ||||||||| ||| ||| ||||||||| |  |||||  |||   |||||||||||||| |    
T  18438588 cagcaacataggcagtatacaaaaacagcatgatataataatatcaaatgcaagtcaacaacatcttttttatacattcatatctcaagtaatgcatata 18438687  T
Q  97 acattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||||| ||| ||||| |||||| ||||| ||||||  |||||||||||||||    
T  18438688 acattatatcacatcatattcaacatcaacacatcttaaacagcttcacagatta 18438742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 151
Target Start/End: Complemental strand, 24153274 - 24153122
Alignment:
Q  2 agcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aac 98  Q
    ||||||||||| |||||||||  |||||||||||||| ||||||||| ||| ||| ||||||||||   || |||  || |||||| ||||||| | |||    
T  24153274 agcaacataggtagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaattatacttcaaataatgcacataac 24153175  T
Q  99 attataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    || ||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  24153174 ataatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 24153122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 137 - 267
Target Start/End: Complemental strand, 23077406 - 23077276
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||| ||||||   ||||||| ||||||||||||||| |||| ||||||||||||| || ||||| |||||||||| ||| ||   |||||| |    
T  23077406 cagcttcacaaattacagtaaacttctcatataggtctcattactacctaagggtccatctctaatcaaattatgcgacacagatcgcaaaatcctcaat 23077307  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    || | |  ||||| |||||||||||||||||    
T  23077306 tgaaatcggttctggaagtgctcgcgaggcg 23077276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 138 - 267
Target Start/End: Original strand, 15051707 - 15051836
Alignment:
Q  138 agcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcactt 237  Q
    ||||||||| ||| ||  |||| ||||||||||||| || || |||| ||||||||||| | || ||| |||||||||||| ||||||   |||| ||||    
T  15051707 agcttcacaaattgcagttaacatcttatataggtcacaatactacctaagggtccatccctaatcaattcatgcgacacagatcacaacatcctaactt 15051806  T
Q  238 gcactaagttctagaagtgctcgcgaggcg 267  Q
    ||| | ||| ||||||||||||||||||||    
T  15051807 gcattcagtcctagaagtgctcgcgaggcg 15051836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 267
Target Start/End: Original strand, 16909941 - 16910070
Alignment:
Q  138 agcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcactt 237  Q
    ||||||||||||| ||  |||| |||| |||||||| ||||| |||| ||||||||||| | || ||| ||| || ||||| ||||     | |||||||    
T  16909941 agcttcacagattgcagttaacatcttgtataggtcacattactacctaagggtccatccctaatcaattcaagcaacacagatcatgacattctcactt 16910040  T
Q  238 gcactaagttctagaagtgctcgcgaggcg 267  Q
    ||||| ||||||||||||||||||||||||    
T  16910041 gcactcagttctagaagtgctcgcgaggcg 16910070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 151
Target Start/End: Original strand, 26686944 - 26687095
Alignment:
Q  4 caacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aaca 99  Q
    |||||||||||||||||||   |||||||||||||| ||||||| | ||| ||| || |||||||   || | |  || |||||||||||||| | ||||    
T  26686944 caacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattccattatacttcaagtaatgcacataaca 26687043  T
Q  100 ttataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    ||||| |||  ||||||||||| ||||| ||||||  |||||||||||||||    
T  26687044 ttatatcacaacataatcaacatcaacacatcttaaacagcttcacagatta 26687095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 151
Target Start/End: Original strand, 43840989 - 43841140
Alignment:
Q  4 caacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aaca 99  Q
    |||||||| ||||||||||   |||||||||||||| ||||||| | ||| ||| || |||||||   || |||  || |||||||||||||| | ||||    
T  43840989 caacatagacagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaattatacttcaagtaatgcacataaca 43841088  T
Q  100 ttataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    ||||| |||  ||||||||||| ||||| ||||||  |||||||||||||||    
T  43841089 ttatatcacaacataatcaacatcaacacatcttaaacagcttcacagatta 43841140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 25476452 - 25476299
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-a 96  Q
    |||||||| ||| |||||||||   |||||||||||||| ||||||||| ||| ||| |||||||| | | |||||  |||  ||||||||||||  | |    
T  25476452 cagcaacacaggtagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaagtatacattcataattcaagtaatgcgcata 25476353  T
Q  97 acattataacacttcataatcaacaacaacatatcttattcagcttcacagatt 150  Q
    |||||||| ||| |||| |||| || ||||| ||||||  ||||||||||||||    
T  25476352 acattatatcacatcattatcatcatcaacacatcttaaacagcttcacagatt 25476299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 267
Target Start/End: Complemental strand, 14878433 - 14878303
Alignment:
Q  138 agcttcacagattacaaataacttcttatataggtctcattattacccaaggg-tccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    ||||||||||||| ||  |||||||||||||| ||| ||||| |||| | ||| |||||||| || ||||| |||||||||| ||| || | |||||| |    
T  14878433 agcttcacagattgcagttaacttcttatataagtcacattactacctagggggtccatctctaatcaaattatgcgacacagatcgcaatatcctcaat 14878334  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
     |||||  ||||| ||||||||| |||||||    
T  14878333 cgcactcggttctggaagtgctctcgaggcg 14878303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 150
Target Start/End: Complemental strand, 23083427 - 23083275
Alignment:
Q  2 agcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aa 97  Q
    |||||||||||||||||||   ||||| |||||||||| ||||||| | ||| ||| ||||||||||   || |||   | |||| ||||||||| | ||    
T  23083427 agcaacataggcagtatacaaaaacagaatgacataataatatcaattgcaagtcaacaacatcttaaatattcaattttacttctagtaatgcacataa 23083328  T
Q  98 cattataacacttcataatcaacaacaacatatcttattcagcttcacagatt 150  Q
    ||||||| ||| |||||||||| | ||||| ||||||  ||||||||||||||    
T  23083327 cattatatcacatcataatcaatatcaacacatcttaaacagcttcacagatt 23083275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 267
Target Start/End: Original strand, 15060483 - 15060612
Alignment:
Q  138 agcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcactt 237  Q
    ||||||||||||| ||  || | ||||||||||||| || || |||| ||||||||||| | || ||| |||||||||||| ||| ||   |||| ||||    
T  15060483 agcttcacagattgcagttaccatcttatataggtcacaatactacctaagggtccatccctaatcaattcatgcgacacagatcgcaacatcctaactt 15060582  T
Q  238 gcactaagttctagaagtgctcgcgaggcg 267  Q
    ||| | ||| || |||||||||||||||||    
T  15060583 gcaatcagtcctggaagtgctcgcgaggcg 15060612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 42386464 - 42386619
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-a 96  Q
    ||||||||||||||||||||||   |||||||||||||  ||||||||| ||| ||| |||||||| |   || ||  |||  |||||| |||||||| |    
T  42386464 cagcaacataggcagtatacaaaaacagcatgacataacaatatcaaatgcaagtcaacaacatctcaaatattcattcataattcaagcaatgcatata 42386563  T
Q  97 acattataacacttcataatcaacaacaacatatctt-attcagcttcacagatta 151  Q
    |||||||| ||| |||||||||||| ||| | ||||| |  |||||||||||||||    
T  42386564 acattatatcacatcataatcaacatcaaaacatcttaaaacagcttcacagatta 42386619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 151
Target Start/End: Complemental strand, 40213765 - 40213634
Alignment:
Q  21 aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattataacacttcataatcaa 119  Q
    |||| ||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |||  | |||||||||| || ||||||||| ||| ||||||||||    
T  40213765 aacatcatgacataataatatcaaatgcaagtcaacaacatctcaattatacattcataatccaagtaatgcgtataacattatatcacatcataatcaa 40213666  T
Q  120 caacaacatatcttattcagcttcacagatta 151  Q
    || ||||| ||||||  |||||| ||||||||    
T  40213665 catcaacacatcttaaacagctttacagatta 40213634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 194
Target Start/End: Original strand, 11862981 - 11863038
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtcca 194  Q
    |||||||||||||| |||||||| ||||| ||||||| ||||| |||| |||||||||    
T  11862981 cagcttcacagatttcaaataacatcttaaataggtcacattaatacctaagggtcca 11863038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 151
Target Start/End: Original strand, 16796685 - 16796755
Alignment:
Q  82 tcaagtaatgcat-aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    ||||||||||||| |||||||||| ||| |||||||||| ||||||| ||||||  || ||||||| ||||    
T  16796685 tcaagtaatgcataaaacattatatcacatcataatcaaaaacaacacatcttaaacaacttcacatatta 16796755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 267
Target Start/End: Original strand, 16369692 - 16369728
Alignment:
Q  231 ctcacttgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||||||||||| |||||| |||||||||||||||||    
T  16369692 ctcacttgcactcagttctggaagtgctcgcgaggcg 16369728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 137 - 267
Target Start/End: Complemental strand, 15597 - 15467
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||  |||||||||||||||||||||||| |||||||||||||||||| || ||||| | |||||||| |||||| | ||||||||    
T  15597 cagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatctctaatcaaattaagcgacacagatcacaatatcctcact 15498  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||||||||||||||||||| ||||||||||    
T  15497 tgcactaagttctagaagtgatcgcgaggcg 15467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 81 - 267
Target Start/End: Original strand, 69930 - 70117
Alignment:
Q  81 ttcaagtaatgca--taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcatt 178  Q
    |||||||||||||  ||| ||||||| ||| ||||| ||||||  ||||| || ||  |||||||||||||| ||  |||||||||||||||||||||||    
T  69930 ttcaagtaatgcaattaatcattatatcacatcatattcaacactaacatctcataa-cagcttcacagattgcagttaacttcttatataggtctcatt 70028  T
Q  179 attacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggcg 267  Q
    | |||||||||||||||||| || ||||| |||||||||| ||| || | |||||||||||||| |||||| |||||||||||||||||    
T  70029 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcg 70117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 137 - 267
Target Start/End: Complemental strand, 8885 - 8755
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||| || | ||| ||||||||||  || || | ||||||||    
T  8885 cagcttcacagattacagttaacttcttatataggtctcattactacccaagggtccatctctaatcgaattatgcgacacaggtcgcaatatcctcact 8786  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||||| |||||| |||||||||||||||||    
T  8785 tgcactcagttctggaagtgctcgcgaggcg 8755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 4903 - 5057
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaa 97  Q
    ||||||||||||||||||||||   |||||||||||||| ||||||||| ||||||| |||||||||| | || |||| | |  ||||||||||||||||    
T  4903 cagcaacataggcagtatacaaaatcagcatgacataataatatcaaatgcaattcaacaacatcttaagtattcaaataattctcaagtaatgcataaa 5002  T
Q  98 -cattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
     ||||||| ||| |||||||||||||||||| ||||||  |||||||||||||||    
T  5003 acattatatcacatcataatcaacaacaacacatcttaaacagcttcacagatta 5057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 13265 - 13419
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-a 96  Q
    ||||||||||||||||||||||   |||||||||||||| ||||||| | ||||||||||||||||||   || |||| ||||||||||||||||||| |    
T  13265 cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgcatata 13364  T
Q  97 acattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||||| ||| |||||||||||| ||||| ||||||  |||||||||| ||||    
T  13365 acattatatcacatcataatcaacatcaacacatcttaaacagcttcacaaatta 13419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 151
Target Start/End: Original strand, 3525 - 3678
Alignment:
Q  2 agcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aa 97  Q
    |||||||||||||||||||||   |||||||||||||| ||||||| | ||||||||||||||||||   || |||| ||||||||||||||||| | ||    
T  3525 agcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgcaaataa 3624  T
Q  98 cattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    ||||||| ||| |||||||||||| ||||| ||||||  |||||||| ||||||    
T  3625 cattatatcacatcataatcaacatcaacacatcttaaacagcttcatagatta 3678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 144
Target Start/End: Original strand, 401 - 543
Alignment:
Q  5 aacataggcagtatacaaca--gcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacatt 101  Q
    |||||||||||||||||| |  ||||||| |||| ||||||| |  || ||| ||||||||||   || | |  || |||||||||||||| | ||||||    
T  401 aacataggcagtatacaaaatagcatgacgtaataatatcaattggaagtcaacaacatcttaaatattcgattatacttcaagtaatgcacataacatt 500  T
Q  102 ataacacttcataatcaacaacaacatatcttattcagcttca 144  Q
    ||| ||| |||||||||||| ||||| ||||||  ||||||||    
T  501 atatcacatcataatcaacatcaacacatcttaaacagcttca 543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 156 - 267
Target Start/End: Original strand, 1550 - 1661
Alignment:
Q  156 taacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagt 255  Q
    ||||||||||||||||||||| || |||||||||||||||||| || ||||| |||||||||| ||| || | |||||||||||||| |||||| |||||    
T  1550 taacttcttatataggtctcaatactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctggaagt 1649  T
Q  256 gctcgcgaggcg 267  Q
    ||||||||||||    
T  1650 gctcgcgaggcg 1661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 137 - 267
Target Start/End: Complemental strand, 18381 - 18251
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    ||||||||||||||  |  |||||||||| ||||||| ||||| |||||| ||||||||||| || ||||| |||||||||||||| || | ||||||||    
T  18381 cagcttcacagattgtagttaacttcttaaataggtcacattactacccaggggtccatctctaatcaaattatgcgacacaaatcgcaatatcctcact 18282  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||||| |||||| |||||||||||||||||    
T  18281 tgcactcagttctggaagtgctcgcgaggcg 18251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 137 - 267
Target Start/End: Original strand, 18431 - 18561
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||  |||||||||||||||||| ||||| |||||||||||||||||| || ||||| |||||||||| ||| || | ||||||||    
T  18431 cagcttcacagattgcagttaacttcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacatatcgcaatatcctcact 18530  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||||| |||||| |||| ||||| ||||||    
T  18531 tgcactcagttctggaagcgctcgtgaggcg 18561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 164
Target Start/End: Complemental strand, 1112 - 949
Alignment:
Q  4 caacataggcagtatacaaca---gcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacat 100  Q
    ||||||||||||||||||| |   |||||||||||| ||||||| | ||||||||||||||||||   || |||| ||| ||||||||||||||||||||    
T  1112 caacataggcagtatacaaaaatagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatattattcaagtaatgcataaacat 1013  T
Q  101 tataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 164  Q
    |||| ||| ||||||||||| | |||| ||||||  |||||||| |||||| || |||| ||||    
T  1012 tatatcacatcataatcaaccaaaacacatcttaaacagcttcaaagattataattaacctctt 949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 164
Target Start/End: Complemental strand, 168042 - 167879
Alignment:
Q  4 caacataggcagtatacaaca---gcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacat 100  Q
    ||||||||||||||||||| |   |||||||||||| ||||||| | ||||||||||||||||||   || |||| ||| ||||||||||||||||||||    
T  168042 caacataggcagtatacaaaaatagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatattattcaagtaatgcataaacat 167943  T
Q  101 tataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 164  Q
    |||| ||| ||||||||||| | |||| ||||||  |||||||| |||||| || |||| ||||    
T  167942 tatatcacatcataatcaaccaaaacacatcttaaacagcttcaaagattataattaacctctt 167879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 51967 - 52121
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-a 96  Q
    |||||||||||||| |||||||   |||||||||||||| ||||||| | ||| ||| || |||||||   || |||  || |||||||||||||| | |    
T  51967 cagcaacataggcaatatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaattatacttcaagtaatgcacata 52066  T
Q  97 acattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||||| |||  ||||||| ||| ||||| ||||||  |||||||||||||||    
T  52067 acattatatcacaacataatctacatcaacacatcttaaacagcttcacagatta 52121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 6 - 159
Target Start/End: Original strand, 6669 - 6826
Alignment:
Q  6 acataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaa-catt 101  Q
    |||||||||||||||||   || ||||||||||| |||||||   ||||||| ||||||||||   || |||||||| ||||||||||||||||| | ||    
T  6669 acataggcagtatacaaaatcaacatgacataatgatatcaatagcaattcaacaacatcttaaatattcaaacattattcaagtaatgcataaaacgtt 6768  T
Q  102 ataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataac 159  Q
    ||| ||| |||||||||||||||||||||| ||| |||||| |||||||| |||||||    
T  6769 atatcacatcataatcaacaacaacatatcatatacagctttacagattataaataac 6826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 64; Significance: 5e-28; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 156 - 267
Target Start/End: Complemental strand, 65702 - 65591
Alignment:
Q  156 taacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagt 255  Q
    |||||||||||||||||||||||| |||||||||||||||||| || ||||| |||||||| | ||| || | |||||||||||||| |||||| |||||    
T  65702 taacttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacaaagatcgcaatatcctcacttgcactcagttctggaagt 65603  T
Q  256 gctcgcgaggcg 267  Q
    |||| |||||||    
T  65602 gctcacgaggcg 65591  T

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Target: scaffold0031; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 128827 - 128871
Alignment:
Q  21 aacagcatgacataattatatcaaattcaattcatcaacatctta 65  Q
    |||||||||||||||| ||||||||| ||| ||| ||||||||||    
T  128827 aacagcatgacataataatatcaaatgcaagtcaacaacatctta 128871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 267
Target Start/End: Complemental strand, 48388 - 48258
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||| ||| ||  |||||||||||||||||||||||| |||||||||||||||||| || ||||| ||| |||||| ||| || | | || |||    
T  48388 cagcttcacatattgcatttaacttcttatataggtctcattactacccaagggtccatctctaatcaaattatgtgacacagatcgcaatattcttact 48289  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||||| |||||| |||||||||||||||||    
T  48288 tgcactcagttctggaagtgctcgcgaggcg 48258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 2006 - 2160
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcat-aa 96  Q
    |||| |||||||||||||||||   || ||||||||||| ||||||| | ||||||| ||||||||||   || |||||||| |||||||||||||| ||    
T  2006 cagcgacataggcagtatacaaaatcaacatgacataatgatatcaattgcaattcaacaacatcttaaatattcaaacattattcaagtaatgcataaa 2105  T
Q  97 acattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||||| | | |||||||||||||||||||||| ||| |||||| ||| ||||    
T  2106 acattatatctcatcataatcaacaacaacatatcatatacagctttacatatta 2160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 137 - 261
Target Start/End: Complemental strand, 38407 - 38283
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||| |||||||||||||||||| ||||| |||||||||||||| ||| || ||||| |||||||||| ||| ||   | ||||||    
T  38407 cagcttcacagattgcaactaacttcttatataggtcacattactacccaagggtccaactctaatcaaattatgcgacacagatcgcaaagttctcact 38308  T
Q  237 tgcactaagttctagaagtgctcgc 261  Q
    |||||| |||||| |||||||||||    
T  38307 tgcacttagttctggaagtgctcgc 38283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 137 - 267
Target Start/End: Complemental strand, 23594 - 23465
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||| ||||||||| |||||||| ||||| |||||||||||||| |   || ||||| |||||||| | ||| ||   | ||||||    
T  23594 cagcttcacagattgcaactaacttctt-tataggtcacattactacccaagggtccaacattaatcaaattatgcgacaaagatcgcaaagttctcact 23496  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||||| ||||||||||||||||||||||||    
T  23495 tgcactcagttctagaagtgctcgcgaggcg 23465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 1905 - 2059
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-a 96  Q
    ||||||||||| ||||||||||   || ||||||||||| ||||||| | ||||||||||||||||||   || |||| ||||||||||||||||| | |    
T  1905 cagcaacatagacagtatacaaaaacaacatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgcacata 2004  T
Q  97 acattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||||| ||| |||||||||||| ||||| ||||||   ||||||||||||||    
T  2005 acattatatcacatcataatcaacatcaacacatcttaaatagcttcacagatta 2059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 24370 - 24214
Alignment:
Q  1 cagcaacataggcagtatacaa----cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata- 95  Q
    ||||||||||||||||||||||    |||||||||||||  ||||||| | ||||||||||||||||||   || |||| ||||||||||||||||| |     
T  24370 cagcaacataggcagtatacaaaacacagcatgacataaaaatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgcacat 24271  T
Q  96 aacattataacacttcataa-tcaacaacaacatatcttattcagcttcacagatta 151  Q
    ||||||||| ||| |||||| |||||| ||||| ||||||  |||||||||||||||    
T  24270 aacattatatcacatcataattcaacatcaacacatcttaaacagcttcacagatta 24214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 267
Target Start/End: Complemental strand, 34838 - 34708
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||  |||| ||||||||||||| ||||| |||||||||||||||||| |||||| | ||| |||| |  || || | | ||||||    
T  34838 cagcttcacagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaaacaagttatgtgacaaaggtcgcaatgttctcact 34739  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||||| |||||| |||||||||||||||||    
T  34738 tgcactcagttctggaagtgctcgcgaggcg 34708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 267
Target Start/End: Original strand, 773 - 903
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||  |||||||||| ||||||||||||| |||| ||||||||||||| || ||||| |||||||||| ||| || | |||||| |    
T  773 cagcttcacagattgcagttaacttcttaaataggtctcattactaccgaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcatt 872  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    | |||| |||||| ||||||||| |||||||    
T  873 tacactcagttctggaagtgctcacgaggcg 903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 267
Target Start/End: Original strand, 3933 - 4062
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||| |||  ||||||||||||| ||||| |||||||||||||||||| || ||||| |||||| ||| ||| ||   ||||||||    
T  3933 cagcttcacagattgcaattaatatcttatataggtcacattactacccaagggtccatctctaatcaaat-atgcgatacagatcgcaacatcctcact 4031  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||||| |||||| |||||||||||||||||    
T  4032 tgcactcagttctggaagtgctcgcgaggcg 4062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 267
Target Start/End: Original strand, 8364 - 8493
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||| |||  ||||||||||||| ||||| |||||||||||||||||| || ||||| |||||| ||| ||| ||   ||||||||    
T  8364 cagcttcacagattgcaattaatatcttatataggtcacattactacccaagggtccatctctaatcaaat-atgcgatacagatcgcaacatcctcact 8462  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||||| |||||| |||||||||||||||||    
T  8463 tgcactcagttctggaagtgctcgcgaggcg 8493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 151
Target Start/End: Original strand, 32997 - 33149
Alignment:
Q  2 agcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aac 98  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||| ||| | | ||||||||||   || |||  || |||||||||||||| | |||    
T  32997 agcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagttaacaacatcttaaatattcaattatacttcaagtaatgcacataac 33096  T
Q  99 attataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  33097 attatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 33149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 151
Target Start/End: Original strand, 38816 - 38968
Alignment:
Q  2 agcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aac 98  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||| ||| | | ||||||||||   || |||  || |||||||||||||| | |||    
T  38816 agcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaaataaacaacatcttaaatattcaattatacttcaagtaatgcacataac 38915  T
Q  99 attataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  38916 attatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 38968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1895 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold1895
Description:

Target: scaffold1895; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 137 - 261
Target Start/End: Complemental strand, 1155 - 1031
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    ||||||||| |||| ||  ||||||||||||||||||  |||| ||||||||| |||||||| || ||||| |||||||||| ||| || | ||||||||    
T  1155 cagcttcactgattgcagttaacttcttatataggtcatattactacccaaggatccatctctaatcaaattatgcgacacagatcgcaatatcctcact 1056  T
Q  237 tgcactaagttctagaagtgctcgc 261  Q
    |||||| |||||| |||||||||||    
T  1055 tgcactcagttctggaagtgctcgc 1031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 4 - 146
Target Start/End: Complemental strand, 6185 - 6039
Alignment:
Q  4 caacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aaca 99  Q
    ||||||||| |||||||||   ||||||||||| || ||||||| | ||||||||||||||||||   || |||| ||||||||||||||||| | ||||    
T  6185 caacataggtagtatacaaaaacagcatgacatgataatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgcacataaca 6086  T
Q  100 ttataacacttcataatcaacaacaacatatcttattcagcttcaca 146  Q
    ||||| ||| |||||||||||| ||||| ||||||  ||||||||||    
T  6085 ttatatcacatcataatcaacatcaacacatcttaaacagcttcaca 6039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 84 - 267
Target Start/End: Complemental strand, 16330 - 16147
Alignment:
Q  84 aagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattatta 182  Q
    |||||||||| | ||||||||| ||| ||||| ||||||  ||||| || ||  |||||||||||||| ||  ||||||||||||||||||  |||| ||    
T  16330 aagtaatgcacataacattatatcacatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttatataggtcatattacta 16232  T
Q  183 cccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||||||||||| ||| || ||||| |||||||||| ||| ||    ||||||||||||| | |||| |||||||||||||||||    
T  16231 cccaagggtccacctctaatcaaattatgcgacacagatcgcaacaacctcacttgcactcaattctggaagtgctcgcgaggcg 16147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 267
Target Start/End: Original strand, 14863 - 14993
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||  ||||||||| ||||||| |||||| |||||| | ||||||||| || ||||| |||||||||| ||  || | ||||||||    
T  14863 cagcttcacagattgcagttaacttcttgtataggtttcattactacccaggagtccatctctaatcaaattatgcgacacagattgcagtatcctcact 14962  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
     ||||| |||||| |||||||||||||||||    
T  14963 ggcactcagttctggaagtgctcgcgaggcg 14993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 137 - 267
Target Start/End: Original strand, 23878 - 24008
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||  ||||||||| ||||||| |||||| |||||| | |||||||||  | ||||| |||||||||| ||  || | ||||||||    
T  23878 cagcttcacagattgcagttaacttcttgtataggtttcattactacccaggtgtccatctcttatcaaattatgcgacacagattgcagtatcctcact 23977  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
     ||||| |||||| |||||||||||||||||    
T  23978 ggcactcagttctggaagtgctcgcgaggcg 24008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 137 - 267
Target Start/End: Original strand, 39302 - 39432
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||  ||||||||| ||||||| |||||| |||||| | |||||||||  | ||||| |||||||||| ||  || | ||||||||    
T  39302 cagcttcacagattgcagttaacttcttgtataggtttcattactacccaggtgtccatctcttatcaaattatgcgacacagattgcagtatcctcact 39401  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
     ||||| |||||| |||||||||||||||||    
T  39402 ggcactcagttctggaagtgctcgcgaggcg 39432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 21 - 159
Target Start/End: Original strand, 22959 - 23098
Alignment:
Q  21 aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattataacacttcataatcaa 119  Q
    |||||||||||||||| ||||||||| ||| ||| ||||||||||   || |||  || |||||||||||||| | ||||||||| ||| || |||||||    
T  22959 aacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaattatacttcaagtaatgcacataacattatatcacatcgtaatcaa 23058  T
Q  120 caacaacatatcttattcagcttcacagattacaaataac 159  Q
    || ||||| ||||||  ||||||||||||||| |||||||    
T  23059 catcaacacatcttaaacagcttcacagattataaataac 23098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 151
Target Start/End: Original strand, 39534 - 39684
Alignment:
Q  4 caacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacat 100  Q
    |||||||||||||||||||  |||||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |||  ||||||||||||| | |||||    
T  39534 caacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcataattcaagtaatgcacataacat 39633  T
Q  101 tataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||| ||| |||||||||||| ||||| ||||||  |||||||| ||||||    
T  39634 tatatcacatcataatcaacatcaacacatcttaaacagcttcatagatta 39684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 151
Target Start/End: Complemental strand, 75278 - 75128
Alignment:
Q  4 caacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacat 100  Q
    |||||||||||||||||||  |||||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |||  ||||||||||||| | |||||    
T  75278 caacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcataattcaagtaatgcacataacat 75179  T
Q  101 tataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||| ||| |||||||||||| ||||| ||||||  |||||||| ||||||    
T  75178 tatatcacatcataatcaacatcaacacatcttaaacagcttcatagatta 75128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 3217 - 3068
Alignment:
Q  1 cagcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aa 97  Q
    ||||||||||||||||||||||  || ||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |||  ||||||||||||||| ||    
T  3217 cagcaacataggcagtatacaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcataattcaagtaatgcatataa 3118  T
Q  98 cattataacacttcataatcaacaacaacatatcttattcagcttcacag 147  Q
    ||||||| ||| |||||||||||| ||||  ||||||  |||||||||||    
T  3117 cattatatcacatcataatcaacatcaacgcatcttaaacagcttcacag 3068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 20965 - 21132
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcat-aa 96  Q
    |||||||||||||| ||| |||   || ||||||||||| ||||||| | ||||||| |||||||||||  || ||||  |||| |||||||||||| ||    
T  20965 cagcaacataggcaatatgcaaaaacaacatgacataataatatcaattgcaattcaacaacatcttatatattcaaatgttctacaagtaatgcataaa 21064  T
Q  97 acattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 164  Q
    |||||||| ||| ||||||||| || ||||| ||||||  ||||||||||| ||| || |||| ||||    
T  21065 acattatatcacatcataatcagcatcaacacatcttaaacagcttcacaggttataattaacatctt 21132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 3253 - 3103
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-a 96  Q
    ||||||||||||||||||||||   |||||||| ||||| |||||||||  |||||| |||||||| | | |||||  |||  |||||||||||| |  |    
T  3253 cagcaacataggcagtatacaaaaacagcatgatataataatatcaaatgtaattcaacaacatctcaagtatacattcataattcaagtaatgcgttta 3154  T
Q  97 acattataacacttcataatcaacaacaacatatcttattcagcttcacag 147  Q
    |||||||| ||| |||||||||||| ||||| ||||||  |||||||||||    
T  3153 acattatatcacatcataatcaacatcaacacatcttaaacagcttcacag 3103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 137 - 265
Target Start/End: Original strand, 6294 - 6422
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||  ||||||||| ||||||| || ||| |||||| || |||||||| || ||||| |||||||||| ||| ||   ||||||||    
T  6294 cagcttcacagattgcagttaacttcttgtataggtttctttactacccagggatccatctctaatcaaattatgcgacacagatcgcaacatcctcact 6393  T
Q  237 tgcactaagttctagaagtgctcgcgagg 265  Q
    |||||  |||||| |||||||||||||||    
T  6394 tgcacacagttctggaagtgctcgcgagg 6422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 96 - 196
Target Start/End: Original strand, 23995 - 24094
Alignment:
Q  96 aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccat 195  Q
    ||||||||| ||| ||||| ||||||  ||||| |||||  |||||||||||||| ||  |||||||||||||||||||||||| |||||||||||||||    
T  23995 aacattatatcacatcatattcaacactaacatctcttaa-cagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccat 24093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 26132 - 25978
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-a 96  Q
    ||||||||||||||||||||||   |||||||||||||| |||||||||  |||||| |||| ||| | | |||||  |||  |||||||||||| |  |    
T  26132 cagcaacataggcagtatacaaaaacagcatgacataataatatcaaatgtaattcaacaacgtctcaagtatacattcataattcaagtaatgcgttta 26033  T
Q  97 acattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||||| ||| |||||||||||| ||||| ||||||  |||||||| ||||||    
T  26032 acattatatcacatcataatcaacatcaacacatcttaaacagcttcatagatta 25978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 44774 - 44709
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatct 63  Q
    |||||||| |||||||||||||   |||||||||||||| ||||||||| ||| ||| ||||||||    
T  44774 cagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatct 44709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 137 - 265
Target Start/End: Complemental strand, 46655 - 46527
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||  |||||||||||||||||| ||||| |||| ||| ||||||| | || ||| | |||||||||| ||| ||   |||| |||    
T  46655 cagcttcacagattgcagttaacttcttatataggtcacattactacctaagagtccatccctaatcaatttatgcgacacagatcgcaacatcctaact 46556  T
Q  237 tgcactaagttctagaagtgctcgcgagg 265  Q
    |||||| |||||| |||||||||||||||    
T  46555 tgcactcagttctggaagtgctcgcgagg 46527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 48; Significance: 2e-18; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 151
Target Start/End: Original strand, 4584 - 4715
Alignment:
Q  21 aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattataacacttcataatcaa 119  Q
    |||||||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |||  |||||||||||| || ||||||||| ||| ||||||||||    
T  4584 aacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcataattcaagtaatgcgtataacattatatcacatcataatcaa 4683  T
Q  120 caacaacatatcttattcagcttcacagatta 151  Q
    || ||||| ||||||  |||||||||||||||    
T  4684 catcaacacatcttaaacagcttcacagatta 4715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 151
Target Start/End: Original strand, 12166 - 12297
Alignment:
Q  21 aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattataacacttcataatcaa 119  Q
    |||||||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |||  |||||||||||| || ||||||||| ||| ||||||||||    
T  12166 aacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcataattcaagtaatgcgtataacattatatcacatcataatcaa 12265  T
Q  120 caacaacatatcttattcagcttcacagatta 151  Q
    || ||||| ||||||  |||||||||||||||    
T  12266 catcaacacatcttaaacagcttcacagatta 12297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 151
Target Start/End: Original strand, 22118 - 22249
Alignment:
Q  21 aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattataacacttcataatcaa 119  Q
    |||||||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |||  |||||||||||| || ||||||||| ||| ||||||||||    
T  22118 aacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcataattcaagtaatgcgtataacattatatcacatcataatcaa 22217  T
Q  120 caacaacatatcttattcagcttcacagatta 151  Q
    || ||||| ||||||  |||||||||||||||    
T  22218 catcaacacatcttaaacagcttcacagatta 22249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 151
Target Start/End: Complemental strand, 340012 - 339863
Alignment:
Q  4 caacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacat 100  Q
    |||||||||||||||||||  || ||||||||||| ||||||||| ||| ||| |||||||| | | |||||  |||  |||||||||||  || |||||    
T  340012 caacataggcagtatacaaaacaacatgacataataatatcaaat-caagtcaacaacatctcaagtatacattcataattcaagtaatgtgtataacat 339914  T
Q  101 tataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  339913 tatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 339863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 71355 - 71419
Alignment:
Q  1 cagcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatctt 64  Q
    ||||||||||||||| |||||| ||||||||||||||  |||||| ||||||||| |||||||||    
T  71355 cagcaacataggcagcatacaaacagcatgacataatattatcaatttcaattcaacaacatctt 71419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 137 - 267
Target Start/End: Complemental strand, 7006 - 6876
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||  |||| ||||||||||||| ||||| |||| ||||| ||||| | || ||| |||||||||||| ||| ||   | |||| |    
T  7006 cagcttcacagattgcagttaacatcttatataggtcacattactacctaagggcccatccctaatcaactcatgcgacacagatcgcaacattctcaat 6907  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||||| |||||| |||||||||||||||||    
T  6906 tgcactcagttctggaagtgctcgcgaggcg 6876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 8599 - 8446
Alignment:
Q  1 cagcaacataggcagtat--acaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aa 97  Q
    ||||||||||||||||||  | |||||||||||||||| ||||||| | ||| ||| || |||||||   || |||  || |||||||||||||| | ||    
T  8599 cagcaacataggcagtatcaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaattatacttcaagtaatgcacataa 8500  T
Q  98 cattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    ||||||| |||  ||||||||||| ||||| ||||||  |||||||||||||||    
T  8499 cattatatcacaacataatcaacatcaacacatcttaaacagcttcacagatta 8446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 137 - 267
Target Start/End: Original strand, 32626 - 32755
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||| |||| | ||| | ||||| | ||| |||||| ||||||| ||| |||||||| |||||||||| ||| |  | ||||||||    
T  32626 cagcttcacagattgcaattaacattttaaa-aggtcactttactacccaggggtccaactctaaacaaattatgcgacacagatcgcgatatcctcact 32724  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||||| |||||| |||||||||||||||||    
T  32725 tgcactcagttctggaagtgctcgcgaggcg 32755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 137 - 267
Target Start/End: Complemental strand, 18584 - 18454
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||  |||||||||||||||||||||||| |||| ||||||||||| | || ||| | | || ||||| | |||    | ||||||    
T  18584 cagcttcacagattgcagttaacttcttatataggtctcattactacctaagggtccatcccaaatcaattgaagcaacacagaacacgacattctcact 18485  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||||| |||||| |||||||||||||||||    
T  18484 tgcactcagttctggaagtgctcgcgaggcg 18454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 151
Target Start/End: Original strand, 39968 - 40120
Alignment:
Q  2 agcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aac 98  Q
    |||||||||||||||||||||  || ||||||||||| ||||||||| ||  |||  |||||||||   ||   |  || |||||||||||||| | |||    
T  39968 agcaacataggcagtatacaaaacaacatgacataataatatcaaatgcatgtcaataacatcttaaatatttgattatacttcaagtaatgcacataac 40067  T
Q  99 attataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||| ||| |||||||||||| ||||| ||| ||   ||||||||||||||    
T  40068 attatatcacatcataatcaacatcaacacatcataaagagcttcacagatta 40120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 13146 - 13313
Alignment:
Q  1 cagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-a 96  Q
    ||||||||||||||||||||||   |||||||||||||| ||||||| | ||| ||| || |||||||   || |||  || |||||||||||||| | |    
T  13146 cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaattatacttcaagtaatgcacata 13245  T
Q  97 acattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 164  Q
    |||||||| |||  ||||||||||| ||||| ||||||  ||| ||||||||||| || |||| ||||    
T  13246 acattatatcacaacataatcaacatcaacacatcttaaacagtttcacagattataattaacatctt 13313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 267
Target Start/End: Original strand, 15642 - 15722
Alignment:
Q  187 agggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||||||||||| || ||||| |||||||||| ||| || | |||||||||||||| |||||| |||||||||||||||||    
T  15642 agggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcg 15722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 17284 - 17128
Alignment:
Q  1 cagcaacataggcagtatacaa-----cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgc-at 94  Q
    ||||||||||||||||||||||     |||||||||||||| ||||||||| ||| ||| |||||||| | | |||||  |||  ||||||||||||  |    
T  17284 cagcaacataggcagtatacaaaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaagtatacattcataattcaagtaatgcgtt 17185  T
Q  95 aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
     ||||||||| ||| |||||||||||| |||||  |||||  |||||| ||||||||    
T  17184 taacattatatcacatcataatcaacatcaacacgtcttaaacagctttacagatta 17128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 267
Target Start/End: Complemental strand, 14005 - 13875
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||  |||| || ||||||||||   ||| ||||||||||||| |||| ||| || | ||||||||||  || ||   | ||||||    
T  14005 cagcttcacagatttcagttaacatcctatataggtcattttactacccaagggtccttctctaaataagttatgcgacacaggtcgcaaagttctcact 13906  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||||| |||||| |||||||||||||||||    
T  13905 tgcactcagttctggaagtgctcgcgaggcg 13875  T

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Target: scaffold0026 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 151
Target Start/End: Original strand, 25951 - 26103
Alignment:
Q  2 agcaacataggcagtatacaacag--catgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aac 98  Q
    ||||||||||||||||||||| |   ||||||||||| ||||||||| ||| | | |||||||| |   || |||  || |||||||||||||||  |||    
T  25951 agcaacataggcagtatacaaaatatcatgacataataatatcaaatgcaagtaaacaacatctcaaatattcaattatacttcaagtaatgcatttaac 26050  T
Q  99 attataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||| ||| |||||||||||| ||||  ||||||  |||||||||||||||    
T  26051 attatatcacatcataatcaacatcaacgcatcttaaacagcttcacagatta 26103  T

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Target: scaffold0026; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 151
Target Start/End: Original strand, 39913 - 40065
Alignment:
Q  2 agcaacataggcagtatacaacag--catgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aac 98  Q
    ||||||||||||||||||||| |   ||||||||||| ||||||||| ||| | | |||||||| |   || |||  || |||||||||||||||  |||    
T  39913 agcaacataggcagtatacaaaatatcatgacataataatatcaaatgcaagtaaacaacatctcaaatattcaattatacttcaagtaatgcatttaac 40012  T
Q  99 attataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||| ||| |||||||||||| ||||  ||||||  |||||||||| ||||    
T  40013 attatatcacatcataatcaacatcaacgcatcttaaacagcttcacaaatta 40065  T

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Target: scaffold0130 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 147
Target Start/End: Original strand, 27911 - 28034
Alignment:
Q  25 gcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattataacacttcataatcaacaac 123  Q
    |||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |||  ||||||||||||||| ||||||||| ||| |||||||||||| |    
T  27911 gcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcataattcaagtaatgcatataacattatatcacatcataatcaacatc 28010  T
Q  124 aacatatcttattcagcttcacag 147  Q
    |||| ||||||  || ||||||||    
T  28011 aacaaatcttaaacaacttcacag 28034  T

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Target: scaffold0484 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 151
Target Start/End: Original strand, 1052 - 1122
Alignment:
Q  82 tcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||||||||||||| ||||||| ||| |||||||||||||||||| ||||||  || ||||||||||||    
T  1052 tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacatcttcacagatta 1122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 267
Target Start/End: Complemental strand, 6344 - 6214
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||| ||| ||  |||| ||||| ||||||| ||||| |||| ||||||||| | | || ||| | |||||| ||||||| || | |||| |||    
T  6344 cagcttcacatatttcagttaacatcttaaataggtcacattactacctaagggtccaaccctaatcaacttatgcgaaacaaatcgcaatatcctaact 6245  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||| | |||||| |||||||||||||||||    
T  6244 tgcattcagttctggaagtgctcgcgaggcg 6214  T

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Target: scaffold0327 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 134
Target Start/End: Complemental strand, 3574 - 3460
Alignment:
Q  21 aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattataacacttcataatcaa 119  Q
    |||||||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |||  |||||||||||| || ||||||||| ||| ||||||||||    
T  3574 aacagcatgacataataatatcaaatgcaagtcaacaacatctcaattatacactcataattcaagtaatgcgtataacattatatcacatcataatcaa 3475  T
Q  120 caacaacatatctta 134  Q
    || ||||| ||||||    
T  3474 catcaacacatctta 3460  T

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Target: scaffold1296 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 267
Target Start/End: Original strand, 582 - 711
Alignment:
Q  138 agcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcactt 237  Q
    ||||||||||||  ||| |||| ||||| ||||||| ||||| |||| ||||||||||| | || ||| | |||||| ||| ||| ||   |||| ||||    
T  582 agcttcacagatctcaattaacatcttaaataggtcgcattactacctaagggtccatcccaaatcaacttatgcgaaacagatcgcaacatcctaactt 681  T
Q  238 gcactaagttctagaagtgctcgcgaggcg 267  Q
    ||| | |||||| |||||||||||||||||    
T  682 gcattcagttctggaagtgctcgcgaggcg 711  T

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Target: scaffold0217 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 16667 - 16516
Alignment:
Q  1 cagcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-a 96  Q
    |||||||| | |||||||||   |||||||||||||||| |||||||||  || ||| || ||||| | | |||||  |||  |||||||||||| || |    
T  16667 cagcaacacaagcagtatacgaaaacagcatgacataataatatcaaatggaagtcaacagcatctcaagtatacattcataattcaagtaatgcgtata 16568  T
Q  97 acattataacacttcataatcaacaacaacatatcttattcagcttcacaga 148  Q
    |||||||| ||| ||| |||||||| ||||| ||||||  ||||||||||||    
T  16567 acattatatcacatcaaaatcaacatcaacacatcttaaacagcttcacaga 16516  T

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Target: scaffold0107 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 15478 - 15417
Alignment:
Q  4 caacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatctt 64  Q
    |||||||||||| |||||| |||||||||||||| ||||||| ||||||||| |||||||||    
T  15478 caacataggcagcatacaaacagcatgacataataatatcaatttcaattcaacaacatctt 15417  T

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Target: scaffold0425 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 265
Target Start/End: Original strand, 348 - 476
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| |   |||| |||||  |||||| ||||| |||| ||||||||||| | || ||| | |||||||||| |||  | | |||| |||    
T  348 cagcttcacagatttccgttaacatcttaattaggtcacattactacctaagggtccatccctaatcaatttatgcgacacagatccaaatatcctaact 447  T
Q  237 tgcactaagttctagaagtgctcgcgagg 265  Q
    |||||| ||||||||||||||| ||||||    
T  448 tgcactcagttctagaagtgcttgcgagg 476  T

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Target: scaffold0120 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 33023 - 32901
Alignment:
Q  1 cagcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aa 97  Q
    |||||||| |||||||||||||  |||||||||||||| ||||||| | ||||||| ||||||||||   || | |  || |||| ||||||||||| ||    
T  33023 cagcaacacaggcagtatacaaaacagcatgacataataatatcaattgcaattcaacaacatcttaaatattc-attatacttcgagtaatgcatataa 32925  T
Q  98 cattataacacttcataatcaaca 121  Q
    ||||||||||| |||| |||||||    
T  32924 cattataacacatcatgatcaaca 32901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 45982 - 46104
Alignment:
Q  1 cagcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aa 97  Q
    |||||||| |||||||||||||  |||||||||||||| ||||||| | ||||||| ||||||||||   || | |  || |||| ||||||||||| ||    
T  45982 cagcaacacaggcagtatacaaaacagcatgacataataatatcaattgcaattcaacaacatcttaaatattc-attatacttcgagtaatgcatataa 46080  T
Q  98 cattataacacttcataatcaaca 121  Q
    ||||||||||| |||| |||||||    
T  46081 cattataacacatcatgatcaaca 46104  T

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Target: scaffold0615 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 267
Target Start/End: Complemental strand, 1988 - 1882
Alignment:
Q  161 tcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcacttgcactaagttctagaagtgctcg 260  Q
    ||||| ||||||| ||||| |||| ||||||||| | | || | | |||||||||||| ||||||   | |||| ||||||| |||||| ||||||||||    
T  1988 tcttaaataggtcacattactacctaagggtccaaccctaatcgattcatgcgacacagatcacaacattctcatttgcactcagttctggaagtgctcg 1889  T
Q  261 cgaggcg 267  Q
    |||||||    
T  1888 cgaggcg 1882  T

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Target: scaffold0220 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 267
Target Start/End: Complemental strand, 4861 - 4731
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||   |||||||||||||||||  | |  |||||||| ||||| |||  | ||||| |||||||||||||| || | |||||| |    
T  4861 cagcttcacagattgcagtaaacttcttatataggtcataatgctacccaagagtccacctctgatcaaattatgcgacacaaatcgcaatgtcctcaat 4762  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    ||||||  ||| | ||| |||||||||||||    
T  4761 tgcactcggttttggaaatgctcgcgaggcg 4731  T

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Target: scaffold0158 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 267
Target Start/End: Original strand, 3030 - 3160
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||| |||| || |||||||||| || || |||| ||| ||||| | | || ||| | |||||||||| ||||||   ||||  ||    
T  3030 cagcttcacagattgcaattaacatcctatataggtcacactactacctaagagtccaaccctaatcaatttatgcgacacagatcacaacatcctatct 3129  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||| | |||||| |||||||||||||||||    
T  3130 tgcattcagttctggaagtgctcgcgaggcg 3160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 267
Target Start/End: Original strand, 6696 - 6826
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||||||| ||| |||| || |||||||||| || || |||| ||| ||||| | | || ||| | |||||||||| ||||||   ||||  ||    
T  6696 cagcttcacagattgcaattaacatcctatataggtcacactactacctaagagtccaaccctaatcaatttatgcgacacagatcacaacatcctatct 6795  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||| | |||||| |||||||||||||||||    
T  6796 tgcattcagttctggaagtgctcgcgaggcg 6826  T

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Target: scaffold0037 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 267
Target Start/End: Complemental strand, 21497 - 21367
Alignment:
Q  137 cagcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcact 236  Q
    |||||||||| ||| ||  |||| ||||| ||||||| ||||| |||| ||||||||||| | || ||| | |||||| ||| ||| ||   |||| |||    
T  21497 cagcttcacaaatttcagttaacatcttaaataggtcacattactacctaagggtccatccctaatcaatttatgcgaaacagatcgcaacatcctaact 21398  T
Q  237 tgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||| | |||||| |||||||||||||||||    
T  21397 tgcattcagttctggaagtgctcgcgaggcg 21367  T

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Target: scaffold0395 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 146
Target Start/End: Complemental strand, 1021 - 881
Alignment:
Q  6 acataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattata 104  Q
    |||||||||||||||||||||||| |||||| ||||| ||| ||| ||| ||| |||| |   || ||| |||  ||||||||||||| | |||||||||    
T  1021 acataggcagtatacaacagcatggcataataatatc-aatgcaagtcaacaaaatctcaaatattcaatcataattcaagtaatgcacataacattata 923  T
Q  105 acacttcataatcaacaacaacatatcttattcagcttcaca 146  Q
     ||| || ||||| ||| ||||| ||||||  ||||||||||    
T  922 tcacatcgtaatcgacatcaacacatcttaaacagcttcaca 881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 28471 - 28536
Alignment:
Q  4 caacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttat 66  Q
    |||||||||||||||||||   || ||||||||||| ||||||| | ||||||| |||||||||||    
T  28471 caacataggcagtatacaaaaacaacatgacataataatatcaattgcaattcaacaacatcttat 28536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 11507 - 11447
Alignment:
Q  4 caacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacat 61  Q
    ||||||||| |||||||||   || ||||||||||| ||||||| ||||||||||||||||    
T  11507 caacataggtagtatacaaaaacaacatgacataataatatcaatttcaattcatcaacat 11447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 138 - 267
Target Start/End: Complemental strand, 6236 - 6107
Alignment:
Q  138 agcttcacagattacaaataacttcttatataggtctcattattacccaagggtccatctccaaacaaatcatgcgacacaaatcacattttcctcactt 237  Q
    ||||||||||||| ||  |||| || || |||| || ||||| |||  | ||||||||||| || ||| | ||||||||||| || ||   |||||||||    
T  6236 agcttcacagattgcatttaacatcctaaatagatcacattactacttaggggtccatctctaatcaagttatgcgacacaagtcgcaacatcctcactt 6137  T
Q  238 gcactaagttctagaagtgctcgcgaggcg 267  Q
    ||| | | |||| |||||||||||||||||    
T  6136 gcattcaattctggaagtgctcgcgaggcg 6107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 12623 - 12687
Alignment:
Q  1 cagcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatct 63  Q
    |||||||||||||||||| |||  |||||||| ||||  ||||||||| ||| ||||||||||||    
T  12623 cagcaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaagtcatcaacatct 12687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 151
Target Start/End: Original strand, 3648 - 3689
Alignment:
Q  110 tcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||||||||||||||| ||||||  |||||||||||||||    
T  3648 tcataatcaacaacaacacatcttaaacagcttcacagatta 3689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 151
Target Start/End: Original strand, 7712 - 7753
Alignment:
Q  110 tcataatcaacaacaacatatcttattcagcttcacagatta 151  Q
    |||||||||||||||||| ||||||  |||||||||||||||    
T  7712 tcataatcaacaacaacacatcttaaacagcttcacagatta 7753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1326 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1326
Description:

Target: scaffold1326; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 267
Target Start/End: Complemental strand, 1324 - 1288
Alignment:
Q  231 ctcacttgcactaagttctagaagtgctcgcgaggcg 267  Q
    |||||||||||| |||||| |||||||||||||||||    
T  1324 ctcacttgcacttagttctggaagtgctcgcgaggcg 1288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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