View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0755_low_135 (Length: 258)
Name: NF0755_low_135
Description: NF0755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0755_low_135 |
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| [»] chr6 (7 HSPs) |
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| [»] chr4 (3 HSPs) |
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| [»] chr8 (4 HSPs) |
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| [»] scaffold0266 (1 HSPs) |
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| [»] scaffold1140 (1 HSPs) |
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| [»] scaffold0225 (1 HSPs) |
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| [»] chr5 (3 HSPs) |
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| [»] scaffold0022 (1 HSPs) |
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| [»] scaffold0008 (2 HSPs) |
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| [»] scaffold0467 (2 HSPs) |
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| [»] scaffold0462 (1 HSPs) |
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| [»] chr3 (8 HSPs) |
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| [»] scaffold0615 (1 HSPs) |
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| [»] scaffold0302 (1 HSPs) |
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| [»] scaffold0218 (1 HSPs) |
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| [»] scaffold0120 (1 HSPs) |
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| [»] scaffold0610 (1 HSPs) |
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| [»] scaffold0673 (1 HSPs) |
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| [»] scaffold0011 (2 HSPs) |
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| [»] scaffold0009 (1 HSPs) |
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| [»] scaffold0021 (2 HSPs) |
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| [»] scaffold0465 (2 HSPs) |
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| [»] scaffold0162 (1 HSPs) |
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| [»] scaffold0049 (1 HSPs) |
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| [»] scaffold0124 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 238; Significance: 1e-132; HSPs: 7)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 5 - 258
Target Start/End: Original strand, 1660325 - 1660578
Alignment:
| Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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|
| T |
1660325 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgtttgctgagg |
1660424 |
T |
|
| Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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|
| T |
1660425 |
aagcagagtactggtggatcaatgccaagggcaggcttgagttgggcggtgatgtggtgacctgggccaagttcaaggttgaattcttgaggaagtattt |
1660524 |
T |
|
| Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagg |
258 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1660525 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagg |
1660578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 5 - 258
Target Start/End: Complemental strand, 17786996 - 17786742
Alignment:
| Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaagg-tcagactagcgactcatatgttagctgag |
103 |
Q |
| |
|
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||| |
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|
| T |
17786996 |
ggagcacagacttgggtgcagggtatggaacggattttccgagctatggttacgggaaatgaccagaaggctcagactagcgactcatatgctagctgag |
17786897 |
T |
|
| Q |
104 |
gaagcagagtactggtggaccaatgccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgaggaagtatt |
203 |
Q |
| |
|
|||| || | |||||||||| |||||||| || || |||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||| |
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|
| T |
17786896 |
gaagaagggcactggtggactaatgccaaaggaagacttgagatgggaggtgatgtggtgacctaggctaagttcaaggtcgaattcttgaggaaatatt |
17786797 |
T |
|
| Q |
204 |
tcccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagg |
258 |
Q |
| |
|
|||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
17786796 |
tccctgaagacttgaggaccaagaaggagattgagtttctgaatctgaaacaagg |
17786742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 5 - 258
Target Start/End: Complemental strand, 18421363 - 18421110
Alignment:
| Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||| ||| | ||||||||||||||||||||||||||||||||| | ||| ||| |
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|
| T |
18421363 |
ggagcacagacttgggtgcagggaatggagcggattttccgatctatggtgacgagggatgaccagaaggtcagactagcgactcatatgcttgctaagg |
18421264 |
T |
|
| Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
| |
|
|||||||| |||||||||| |||||||| || || |||||| ||||||||||||| ||||||| ||| |||||| ||||||||||||||||||||||||| |
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|
| T |
18421263 |
aagcagagcactggtggactaatgccaaaggaagacttgagatgggaggtgatgttgtgacctgggctaagttccaggttgaattcttgaggaagtattt |
18421164 |
T |
|
| Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagg |
258 |
Q |
| |
|
||| ||||||||||||||||| |||||| |||||||||||||||| ||||||| |
|
|
| T |
18421163 |
ccctgaagacttgaggaccaacaaggagattgagtttctgaatctataacaagg |
18421110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 5 - 258
Target Start/End: Complemental strand, 16104104 - 16103851
Alignment:
| Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
| |
|
|||| ||| |||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| || | ||||||| |
|
|
| T |
16104104 |
ggagtacaaacttgggtgcagggtatggagcggattttccaagctatggtgacgggagatgaccagaaggtcagactagcgactcatgtgcttgctgagg |
16104005 |
T |
|
| Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
| |
|
|||| ||| |||||||||| |||||||| || || ||||| ||||||||||||||||||||| ||| |||||||| | ||||||||||||||||||||| |
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|
| T |
16104004 |
aagcggagcactggtggactaatgccaaaggaagacttgaaatgggaggtgatgtggtgacctgggctaagttcaaagctgaattcttgaggaagtattt |
16103905 |
T |
|
| Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagg |
258 |
Q |
| |
|
||| |||||||||||||| |||||||||||||||||||||||| |||| ||||| |
|
|
| T |
16103904 |
ccctgaagacttgaggactaagaaggaggttgagtttctgaatttgaatcaagg |
16103851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 5 - 252
Target Start/End: Original strand, 21412008 - 21412255
Alignment:
| Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||||| || || |||||||| |||||||||||||| |||| |||| | |||||||||||| | ||||||| |
|
|
| T |
21412008 |
ggagctcagacttgggtgcagggcatggagcggatatttcgtgctatggtgacgggagatgaccaaaaggccagattggcgactcatatgcttgctgagg |
21412107 |
T |
|
| Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
| |
|
| || |||||||||||||| |||| ||| || || ||||| ||||||| || || ||||||| ||| |||||||| | |||||||| ||||||||||| |
|
|
| T |
21412108 |
aggctgagtactggtggactaatgtcaaaggaagatttgagatgggaggagaagttgtgacctgggcgaagttcaaagcagaattcttaaggaagtattt |
21412207 |
T |
|
| Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaa |
252 |
Q |
| |
|
||| ||||| ||||| || | ||||||||| || |||||||| ||||| |
|
|
| T |
21412208 |
ccctgaagatttgagaactaggaaggaggtggaatttctgaacctgaa |
21412255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 240
Target Start/End: Original strand, 22364852 - 22365081
Alignment:
| Q |
11 |
cagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgaggaagcag |
110 |
Q |
| |
|
||||||||||||||||| || ||| |||| ||||| |||||||| || | |||||| |||||||||| | | ||||| ||| | |||||||| || | |
|
|
| T |
22364852 |
cagacttgggtgcagggcatagagaggatattccgtgctatggtgacaagtgatgactagaaggtcaggttggttactcacatgcttgctgaggaggccg |
22364951 |
T |
|
| Q |
111 |
agtactggtggaccaatgccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgaggaagtatttcccgga |
210 |
Q |
| |
|
|||| |||||||| ||| | ||||| || |||||| | || || || || ||||| | ||| |||||||| ||||| |||||||||||||||||||| || |
|
|
| T |
22364952 |
agtattggtggactaattctaagggaagacttgagattggtggagaagttgtgacttgggcaaagttcaaagttgagttcttgaggaagtatttccctga |
22365051 |
T |
|
| Q |
211 |
agacttgaggaccaagaaggaggttgagtt |
240 |
Q |
| |
|
|| |||||||||| |||||| || ||||| |
|
|
| T |
22365052 |
aggtttgaggaccaggaaggaagtagagtt |
22365081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 258
Target Start/End: Original strand, 16378879 - 16379108
Alignment:
| Q |
29 |
atggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgaggaagcagagtactggtggaccaatg |
128 |
Q |
| |
|
|||||| |||| || || |||||||| || | ||||| |||||||| || | || ||||| ||| | |||||||| || ||||| ||||||||||||| |
|
|
| T |
16378879 |
atggagaggatctttcgtgctatggtgactagtgatgatcagaaggtgaggttggctactcacatgcttgctgaggaggctgagtattggtggaccaatg |
16378978 |
T |
|
| Q |
129 |
ccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgaggaagtatttcccggaagacttgaggaccaagaa |
228 |
Q |
| |
|
| ||||| || |||||| | || || || || ||||| | | | | |||||||| ||| || ||||||||||| || || || || |||||||| | ||| |
|
|
| T |
16378979 |
ctaagggaagacttgagattggtggagaggttgtgacttggacaaggttcaaggctgagtttttgaggaagtactttccagaggatttgaggactaggaa |
16379078 |
T |
|
| Q |
229 |
ggaggttgagtttctgaatctgaaacaagg |
258 |
Q |
| |
|
||| || ||||| |||||| |||| ||||| |
|
|
| T |
16379079 |
ggaagtggagttcctgaatttgaagcaagg |
16379108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 234; Significance: 1e-129; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 5 - 258
Target Start/End: Complemental strand, 15000588 - 15000336
Alignment:
| Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
15000588 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgactagaaggtcagactagcgactcatatgttagctgagg |
15000489 |
T |
|
| Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| || |
|
|
| T |
15000488 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttggggggtgatgtggtgacctgggccaagttcaaggttgaattcttgaggaagta-tt |
15000390 |
T |
|
| Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagg |
258 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15000389 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagg |
15000336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 28266083 - 28266127
Alignment:
| Q |
214 |
cttgaggaccaagaaggaggttgagtttctgaatctgaaacaagg |
258 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28266083 |
cttgaggaccaagaaggaggttgagtttctgaatctgaaacaagg |
28266127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 222
Target Start/End: Complemental strand, 18272928 - 18272804
Alignment:
| Q |
98 |
gctgaggaagcagagtactggtggaccaatgccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgagga |
197 |
Q |
| |
|
|||||||| || ||||| |||||||| ||||| ||||| || |||||| | || || || || ||||| | ||| |||||||| | ||| || ||||||| |
|
|
| T |
18272928 |
gctgaggaggccgagtattggtggactaatgctaagggaagacttgagattggtggagaggttgtgacttgggcaaagttcaaagctgagtttttgagga |
18272829 |
T |
|
| Q |
198 |
agtatttcccggaagacttgaggac |
222 |
Q |
| |
|
||||||| || ||||| || ||||| |
|
|
| T |
18272828 |
agtattttccagaagatttaaggac |
18272804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 210; Significance: 1e-115; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 5 - 258
Target Start/End: Original strand, 21847117 - 21847370
Alignment:
| Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||| | |||||||||||| ||||||||| |
|
|
| T |
21847117 |
ggagcacagacttgggtgcagggaatggagcggattttccaagctatggttactggtgatgaccagaaggtcagattggcgactcatatgctagctgagg |
21847216 |
T |
|
| Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||| ||||| ||| ||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
21847217 |
aagcagagtactggtggaccaatgccaagggcagacttgagttggaaggtggtgttgtgacctgggccaagttcaaggttgaattcttgaggaagtattt |
21847316 |
T |
|
| Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagg |
258 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21847317 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagg |
21847370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 5 - 258
Target Start/End: Original strand, 20649135 - 20649388
Alignment:
| Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| |||| ||||||||||| |||||||||||||||||||||||||| |||||||||||| | ||||||| |
|
|
| T |
20649135 |
ggagcacagacttgggtgcagggcatggagcgggtttttcgagctatggtgacgggagatgaccagaaggtcagactggcgactcatatgcttgctgagg |
20649234 |
T |
|
| Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
| |
|
|||||||| ||| |||||| |||||||| || || |||||||||||||||||||| ||||||| ||| |||||||| ||||||||||||||||||| ||| |
|
|
| T |
20649235 |
aagcagagcacttgtggactaatgccaaaggaagacttgagttgggaggtgatgttgtgacctgggcgaagttcaaagttgaattcttgaggaagtgttt |
20649334 |
T |
|
| Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagg |
258 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||| | |||||||| |
|
|
| T |
20649335 |
ccctgaagacttgaggaccaagaaggaggttgagtttctgaatttaaaacaagg |
20649388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 156 - 256
Target Start/End: Complemental strand, 16415935 - 16415835
Alignment:
| Q |
156 |
atgtggtgacctaggccaagttcaaggttgaattcttgaggaagtatttcccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaaca |
255 |
Q |
| |
|
|||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
16415935 |
atgtggtgacctcggctaagttcaaggttgaattcttgaggaagtatttccccgaagacttgaggaccaagaaggagattgagtttctgaatctgaaaca |
16415836 |
T |
|
| Q |
256 |
a |
256 |
Q |
| |
|
| |
|
|
| T |
16415835 |
a |
16415835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 5 - 246
Target Start/End: Original strand, 21193332 - 21193573
Alignment:
| Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
| |
|
||||| || |||||||||||||| |||||| |||| || | |||||||| ||| | |||||||||||||||||| | ||||||||||| | ||||||| |
|
|
| T |
21193332 |
ggagctcaaacttgggtgcagggcatggagaggatattttgtgctatggtgacgagtgatgaccagaaggtcagattgacgactcatatgcttgctgagg |
21193431 |
T |
|
| Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
| |
|
| || || || |||||||||||||||||||| || |||||| | | || || || ||||| | ||| |||||||| | ||| ||||||||||||||||| |
|
|
| T |
21193432 |
aggccgaatattggtggaccaatgccaagggaagacttgagattgttggggaagtcgtgacttgggcgaagttcaaagctgagttcttgaggaagtattt |
21193531 |
T |
|
| Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaa |
246 |
Q |
| |
|
||| ||||| |||||||||| ||||||||| | ||||||||| |
|
|
| T |
21193532 |
ccctgaagatttgaggaccaggaaggaggtagcgtttctgaa |
21193573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0266 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: scaffold0266
Description:
Target: scaffold0266; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 8 - 258
Target Start/End: Original strand, 6200 - 6450
Alignment:
| Q |
8 |
gcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgaggaag |
107 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
6200 |
gcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttgactgaggaag |
6299 |
T |
|
| Q |
108 |
cagagtactggtggaccaatgccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgaggaagtatttccc |
207 |
Q |
| |
|
||||| ||| |||||||||||||||||| ||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
6300 |
cagagcactagtggaccaatgccaagggaaggcttgagttgggaaatgatgtggtgacctgggctaagttcaaggttgaattcttgaggaagtatttccc |
6399 |
T |
|
| Q |
208 |
ggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagg |
258 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
6400 |
tgaagacttgaggaccaagaaggaggttgagtttctgaatctgaagcaagg |
6450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1140 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: scaffold1140
Description:
Target: scaffold1140; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 5 - 258
Target Start/End: Complemental strand, 555 - 302
Alignment:
| Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
| |
|
|||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
555 |
ggagcacatacttgggtgcagggtatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgctagctgagg |
456 |
T |
|
| Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
| |
|
|||||||| |||| ||||| |||||||| || |||||||||||||||||| |||||||||| | ||| |||||||||||||||||||||||||||||||| |
|
|
| T |
455 |
aagcagagcactgatggactaatgccaaaggaaggcttgagttgggaggttatgtggtgacgtgggctaagttcaaggttgaattcttgaggaagtattt |
356 |
T |
|
| Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagg |
258 |
Q |
| |
|
|||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
355 |
cccgtaagacttgaggaccaagaaggagattgagtttctgaatctgaaacaagg |
302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0225 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: scaffold0225
Description:
Target: scaffold0225; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 5 - 258
Target Start/End: Complemental strand, 27360 - 27107
Alignment:
| Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
| |
|
|||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
27360 |
ggaggacagacttgggtgcaggggatggagcggattttccgagctatggttacgggagatgaccagaaggtcagattagcgactcatatgctagctgagg |
27261 |
T |
|
| Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
| |
|
|||||||||||||||||||||||||||| || || |||||| ||||||||||||||||||||| ||| ||||||||| |||||||||||||||| ||||| |
|
|
| T |
27260 |
aagcagagtactggtggaccaatgccaaaggaagacttgagatgggaggtgatgtggtgacctgggctaagttcaagtttgaattcttgaggaattattt |
27161 |
T |
|
| Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagg |
258 |
Q |
| |
|
|||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
27160 |
cccgaaagacttgaggaccaagaaggagattgagtttctgaatctgaaacaagg |
27107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 198; Significance: 1e-108; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 5 - 258
Target Start/End: Complemental strand, 23509524 - 23509271
Alignment:
| Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
23509524 |
ggagcacagacttgggtgcaggggatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactggcgactcatatgttgactgagg |
23509425 |
T |
|
| Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
| |
|
|||||||| ||||||||||||||||||| || |||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |
|
|
| T |
23509424 |
aagcagagcactggtggaccaatgccaaaggaaggcttaagttgggaggtgatgtggtgacctgggctaagttcaaggttgaattcttgaggaagtattt |
23509325 |
T |
|
| Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagg |
258 |
Q |
| |
|
||| |||||||||||||||||||||| | ||||||||||||||||||| ||||| |
|
|
| T |
23509324 |
ccccgaagacttgaggaccaagaaggcgattgagtttctgaatctgaagcaagg |
23509271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 145
Target Start/End: Complemental strand, 21828655 - 21828515
Alignment:
| Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
| |
|
||||| ||||| ||| |||| || |||||| |||| ||||| |||||||| || | ||||| ||||||||||| | || || || ||| | ||||||| |
|
|
| T |
21828655 |
ggagctcagacatggctgcaaggcatggagaggatcttccgtgctatggtgactagtgatgatcagaaggtcaggttggctacccacatgcttgctgagg |
21828556 |
T |
|
| Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgag |
145 |
Q |
| |
|
|||| |||| |||||||| ||||| ||||| || |||||| |
|
|
| T |
21828555 |
aagctgagttttggtggactaatgctaaggggagacttgag |
21828515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 145
Target Start/End: Complemental strand, 24585049 - 24584909
Alignment:
| Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
| |
|
||||| ||||| ||| |||| || |||||| |||| || || |||||||| || | ||||| |||||||| || | || ||||| ||| | ||||||| |
|
|
| T |
24585049 |
ggagctcagacatggttgcaaggcatggagaggatctttcgtgctatggtgactagtgatgatcagaaggtgaggttggctactcagatgcttgctgagg |
24584950 |
T |
|
| Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgag |
145 |
Q |
| |
|
| || ||||| |||||||||||||| ||||| || |||||| |
|
|
| T |
24584949 |
aggctgagtattggtggaccaatgctaagggaagacttgag |
24584909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0022 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: scaffold0022
Description:
Target: scaffold0022; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 5 - 258
Target Start/End: Original strand, 7776 - 8029
Alignment:
| Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
| |
|
|||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |
|
|
| T |
7776 |
ggagcacagacttgggtgtaggggatggagcggattttccgagctatggttacgggagatgaccagaaggtcaaactagcgactcatatgctagctgagg |
7875 |
T |
|
| Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
| |
|
||||| || ||| ||||||||||||||| ||||||||||||||||||||||||| |||||||| ||| | |||||||||||||||||||||||||||||| |
|
|
| T |
7876 |
aagcatagcactagtggaccaatgccaaaggcaggcttgagttgggaggtgatgaggtgacctgggctatgttcaaggttgaattcttgaggaagtattt |
7975 |
T |
|
| Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagg |
258 |
Q |
| |
|
|||||||||||||||| ||||||||||| | |||||||||||||||||||||| |
|
|
| T |
7976 |
cccggaagacttgagggccaagaaggagatgaagtttctgaatctgaaacaagg |
8029 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 189; Significance: 1e-102; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 8 - 252
Target Start/End: Complemental strand, 22281668 - 22281424
Alignment:
| Q |
8 |
gcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgaggaag |
107 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
22281668 |
gcacagacttgggtgcaggggatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactggcgactcatatgttgactgaggaag |
22281569 |
T |
|
| Q |
108 |
cagagtactggtggaccaatgccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgaggaagtatttccc |
207 |
Q |
| |
|
||||| ||||||||||||||||||| || ||||||||| |||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
22281568 |
cagagcactggtggaccaatgccaaaggaaggcttgagatgggaggtgatgtggtaacctgggctaagttcaaggttgaattcttgaggaagtatttccc |
22281469 |
T |
|
| Q |
208 |
ggaagacttgaggaccaagaaggaggttgagtttctgaatctgaa |
252 |
Q |
| |
|
| ||||||||||||||||||||||| |||||||| |||||||||| |
|
|
| T |
22281468 |
gaaagacttgaggaccaagaaggagattgagtttttgaatctgaa |
22281424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 135
Target Start/End: Complemental strand, 25132026 - 25131896
Alignment:
| Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
| |
|
||||| ||||| |||||||| || |||||| |||| ||||| |||||||| || | ||||| ||||||||||| |||| || || ||| | ||||||| |
|
|
| T |
25132026 |
ggagctcagacatgggtgcaaggcatggagaggatcttccgtgctatggtgactagtgatgatcagaaggtcaggttagctacccacatgcttgctgagg |
25131927 |
T |
|
| Q |
105 |
aagcagagtactggtggaccaatgccaaggg |
135 |
Q |
| |
|
| || ||||| |||||||| ||||| ||||| |
|
|
| T |
25131926 |
aggccgagtattggtggacaaatgctaaggg |
25131896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0008 (Bit Score: 183; Significance: 4e-99; HSPs: 2)
Name: scaffold0008
Description:
Target: scaffold0008; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 8 - 258
Target Start/End: Original strand, 130829 - 131079
Alignment:
| Q |
8 |
gcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgaggaag |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||| ||||| ||||| |||||||||||||| ||||||||| |
|
|
| T |
130829 |
gcacagacttgggtgcagggaatggagcggattttctgagctattgttacggaagatgaccaaaaggttagactggcgactcatatgttgactgaggaag |
130928 |
T |
|
| Q |
108 |
cagagtactggtggaccaatgccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgaggaagtatttccc |
207 |
Q |
| |
|
||||| ||| |||||||||||||||||| |||||||| ||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
130929 |
cagagcactagtggaccaatgccaagggaaggcttgaattgggagatgatgtggtgacctgggctaagttcaaggttgaattcttgaggaagtatttccc |
131028 |
T |
|
| Q |
208 |
ggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagg |
258 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
131029 |
tgaagacttgaggaccaagaaggaggttgagtttctgaatctgaagcaagg |
131079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0008; HSP #2
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 5 - 258
Target Start/End: Complemental strand, 27740 - 27487
Alignment:
| Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
| |
|
|||||||| |||||||||||||| |||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||| ||||| | ||||||| |
|
|
| T |
27740 |
ggagcacaaacttgggtgcaggggatggagcggattttccgagctacggtcacgagagatgaccagaaggtcagactagcgacttatatgcttgctgagg |
27641 |
T |
|
| Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
| |
|
||||| || |||||||||| |||||||| || || |||||| ||||||||||||||| ||||| ||| |||||||| || ||||||||||||||||||| |
|
|
| T |
27640 |
aagcaaagcactggtggactaatgccaaaggaagacttgagatgggaggtgatgtggggacctgggctaagttcaaagtcaaattcttgaggaagtattt |
27541 |
T |
|
| Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagg |
258 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27540 |
ccctgaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagg |
27487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0467 (Bit Score: 182; Significance: 2e-98; HSPs: 2)
Name: scaffold0467
Description:
Target: scaffold0467; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 5 - 258
Target Start/End: Original strand, 12671 - 12924
Alignment:
| Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
| |
|
||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |
|
|
| T |
12671 |
ggagcacagacttgggtctaggggatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactggcgactcatatgctagctgagg |
12770 |
T |
|
| Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
| |
|
|||||||| |||||||| | |||||||| || || |||||| |||||||||||||||||| || ||| |||||||||||||||||||||||||||||||| |
|
|
| T |
12771 |
aagcagagcactggtgggctaatgccaaaggaagacttgagatgggaggtgatgtggtgaactgggctaagttcaaggttgaattcttgaggaagtattt |
12870 |
T |
|
| Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagg |
258 |
Q |
| |
|
||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
12871 |
ccctgaagacttgaggaccaagaaggaaattgagtttctgaatctgaaacaagg |
12924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0467; HSP #2
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 45 - 258
Target Start/End: Original strand, 1 - 214
Alignment:
| Q |
45 |
gagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgaggaagcagagtactggtggaccaatgccaagggcaggcttga |
144 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||| | |||||||| || || ||||| |
|
|
| T |
1 |
gagctatggttacgggagatgaccagaaggtcagactggcgactcatatgctagctgaggaagcagagcactggtgggctaatgccaaaggaagacttga |
100 |
T |
|
| Q |
145 |
gttgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgaggaagtatttcccggaagacttgaggaccaagaaggaggttgagtttctg |
244 |
Q |
| |
|
| |||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |
|
|
| T |
101 |
gatgggaggtgatgtggtgaactgggctaagttcaaggttgaattcttgaggaagtatttccctgaagacttgaggaccaagaaggaaattgagtttctg |
200 |
T |
|
| Q |
245 |
aatctgaaacaagg |
258 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
201 |
aatctgaaacaagg |
214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 181; Significance: 7e-98; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 8 - 252
Target Start/End: Complemental strand, 20929001 - 20928757
Alignment:
| Q |
8 |
gcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgaggaag |
107 |
Q |
| |
|
||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||| |
|
|
| T |
20929001 |
gcacagacttgggtgtagggaatggaacggattttccgagctatggttacgggagatgaccagaaggtcagactggcgactcataagttgactgaggaag |
20928902 |
T |
|
| Q |
108 |
cagagtactggtggaccaatgccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgaggaagtatttccc |
207 |
Q |
| |
|
||||| | |||||||||||||||||||| ||||||||| |||||| |||||||||||||| ||| |||||||||||||||||||| |||||||||||||| |
|
|
| T |
20928901 |
cagagcattggtggaccaatgccaagggaaggcttgagatgggagatgatgtggtgacctgggctaagttcaaggttgaattcttaaggaagtatttccc |
20928802 |
T |
|
| Q |
208 |
ggaagacttgaggaccaagaaggaggttgagtttctgaatctgaa |
252 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
20928801 |
cgaagacttgaggaccaagaaggagattgagtttctgaatctgaa |
20928757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 9 - 252
Target Start/End: Complemental strand, 20528999 - 20528756
Alignment:
| Q |
9 |
cacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgaggaagc |
108 |
Q |
| |
|
||||||||||||||||| | |||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
20528999 |
cacagacttgggtgcagaggatggagcggattttccaagctatggttacggaagatgaccagaaggttagactagcgactcatatgttgactgaggaagc |
20528900 |
T |
|
| Q |
109 |
agagtactggtggaccaatgccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgaggaagtatttcccg |
208 |
Q |
| |
|
|||| |||||||||| |||||||| || ||||||||| |||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
20528899 |
agagcactggtggactaatgccaaaggaaggcttgagatgggagatgatgtggtgacctgggctaagttcaaggttgaattcttgaggaagtatttcccc |
20528800 |
T |
|
| Q |
209 |
gaagacttgaggaccaagaaggaggttgagtttctgaatctgaa |
252 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
20528799 |
gaagacttgaggaccaagaaggacattgagtttctgaatctgaa |
20528756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 258
Target Start/End: Original strand, 20827825 - 20828054
Alignment:
| Q |
29 |
atggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgaggaagcagagtactggtggaccaatg |
128 |
Q |
| |
|
|||||| |||| || || |||||||| || | ||||| |||||||| || | || ||||| ||| | |||||||| || ||||| ||||||||||||| |
|
|
| T |
20827825 |
atggagaggatctttcgtgctatggtgactagtgatgatcagaaggtgaggttggctactcacatgcttgctgaggaggctgagtattggtggaccaatg |
20827924 |
T |
|
| Q |
129 |
ccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgaggaagtatttcccggaagacttgaggaccaagaa |
228 |
Q |
| |
|
| ||||| || |||||| | || || || || ||||| | | | | |||||||| ||| || ||||||||||| || || || || |||||||| | ||| |
|
|
| T |
20827925 |
ctaagggaagacttgagattggtggagaggttgtgacttggacaaggttcaaggctgagtttttgaggaagtactttccagaggatttgaggactaggaa |
20828024 |
T |
|
| Q |
229 |
ggaggttgagtttctgaatctgaaacaagg |
258 |
Q |
| |
|
||| || ||||| |||||| |||| ||||| |
|
|
| T |
20828025 |
ggaagtggagttcctgaatttgaagcaagg |
20828054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0462 (Bit Score: 178; Significance: 4e-96; HSPs: 1)
Name: scaffold0462
Description:
Target: scaffold0462; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 5 - 258
Target Start/End: Complemental strand, 3675 - 3422
Alignment:
| Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
| |
|
|||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||| |
|
|
| T |
3675 |
ggagcacaaacttgggtgcagggtatggagcggattttccgagctatggtgacgggagatgaccagaaggtcagactagcgactcatatgcttgctgagg |
3576 |
T |
|
| Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
| |
|
|||||||| ||| |||||| |||||||| || || |||||| ||||||||||||||||||||| ||| |||||||| | | |||| |||||||||||||| |
|
|
| T |
3575 |
aagcagagaactagtggactaatgccaaaggaagacttgagatgggaggtgatgtggtgacctgggctaagttcaaagcttaattattgaggaagtattt |
3476 |
T |
|
| Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagg |
258 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3475 |
ccctgaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagg |
3422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 178; Significance: 4e-96; HSPs: 8)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 5 - 258
Target Start/End: Original strand, 6149429 - 6149682
Alignment:
| Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
| |
|
|||||||| |||||||||||||| |||||||||||||||||||||||||| || |||| ||||||||||||||| ||||||||||||||| | ||||||| |
|
|
| T |
6149429 |
ggagcacaaacttgggtgcagggtatggagcggattttccgagctatggtgacaggaggtgaccagaaggtcaggctagcgactcatatgcttgctgagg |
6149528 |
T |
|
| Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
| |
|
|||||||| |||||||||| |||||||| || || |||||| ||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
6149529 |
aagcagagcactggtggactaatgccaaaggaagacttgagatgggaggtgatgtggtgacctgggcgaagtttaaggttgaattcttgaggaagtattt |
6149628 |
T |
|
| Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagg |
258 |
Q |
| |
|
||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
6149629 |
ccctgaagacttgaggaccaagaaggagattgagtttctgaatctgaaacaagg |
6149682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 8 - 258
Target Start/End: Original strand, 15943174 - 15943424
Alignment:
| Q |
8 |
gcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgaggaag |
107 |
Q |
| |
|
||||||||||||||||| || ||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||| |||||||||||||| ||||||||| |
|
|
| T |
15943174 |
gcacagacttgggtgcaagggatggagcagattttccgagctatggttacaggagatgaccaaaaggttagactggcgactcatatgttgactgaggaag |
15943273 |
T |
|
| Q |
108 |
cagagtactggtggaccaatgccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgaggaagtatttccc |
207 |
Q |
| |
|
| ||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||| |
|
|
| T |
15943274 |
cggagcactggtggaccaatgccaagggaaggcttgagttggaaggtgatgtggtgacctgggctaagttcaaggttgaattcttaaggaagtatttccc |
15943373 |
T |
|
| Q |
208 |
ggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagg |
258 |
Q |
| |
|
||||||||||||||||||||| ||| |||||||||||||||| || ||||| |
|
|
| T |
15943374 |
ggaagacttgaggaccaagaatgagattgagtttctgaatctaaagcaagg |
15943424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 5 - 258
Target Start/End: Complemental strand, 25768779 - 25768526
Alignment:
| Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
| |
|
||||| || |||||||||||||| || ||| |||| ||||| |||||||| ||| | |||||||| ||||||||| | |||||||||||| | ||||||| |
|
|
| T |
25768779 |
ggagctcatacttgggtgcagggcatagagaggatattccgtgctatggtgacgagtgatgaccaaaaggtcagattggcgactcatatgcttgctgagg |
25768680 |
T |
|
| Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
| |
|
| || || | |||||||| |||||||| || || |||||||||||||| || || ||||||| ||| |||||||| | ||| ||||||||||||||||| |
|
|
| T |
25768679 |
aggccgaacattggtggactaatgccaaaggaagacttgagttgggaggagaagttgtgacctgggcgaagttcaaagctgagttcttgaggaagtattt |
25768580 |
T |
|
| Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagg |
258 |
Q |
| |
|
||| ||||| |||||||||| ||||||||||||||||||||| |||||||||| |
|
|
| T |
25768579 |
ccctgaagatttgaggaccaggaaggaggttgagtttctgaacttgaaacaagg |
25768526 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 246
Target Start/End: Complemental strand, 17202192 - 17201959
Alignment:
| Q |
13 |
gacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgaggaagcagag |
112 |
Q |
| |
|
||||||||||||||| |||||| |||| || || |||||||| ||| | ||||| |||||||| || | || ||||| ||| | |||||||| || ||| |
|
|
| T |
17202192 |
gacttgggtgcagggcatggagaggatatttcgtgctatggtgacgagtgatgaacagaaggtgaggttggctactcacatgcttgctgaggaggccgag |
17202093 |
T |
|
| Q |
113 |
tactggtggaccaatgccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgaggaagtatttcccggaag |
212 |
Q |
| |
|
|| | |||||| ||||| ||||| || |||||| | || || || || ||||| | ||| |||||||| | ||| ||||||||||||||||| || |||| |
|
|
| T |
17202092 |
tattagtggactaatgctaagggaagacttgagattggtggagaagttgtgacttgggcaaagttcaaagctgagttcttgaggaagtattttcctgaag |
17201993 |
T |
|
| Q |
213 |
acttgaggaccaagaaggaggttgagtttctgaa |
246 |
Q |
| |
|
| |||||||||| |||||| || ||||| ||||| |
|
|
| T |
17201992 |
atttgaggaccaggaaggaagtggagttcctgaa |
17201959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 5225013 - 5224953
Alignment:
| Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatg |
65 |
Q |
| |
|
|||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||| |
|
|
| T |
5225013 |
ggagcatagacttgggtgcaggggatggagcggattttccaagctatggttacgggagatg |
5224953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 222
Target Start/End: Original strand, 22149379 - 22149539
Alignment:
| Q |
62 |
gatgaccagaaggtcagactagcgactcatatgttagctgaggaagcagagtactggtggaccaatgccaagggcaggcttgagttgggaggtgatgtgg |
161 |
Q |
| |
|
|||||||||||||| || | || ||||||||| | |||||||| |||||||| | |||||| |||||||| || || |||||| ||| || || |||| |
|
|
| T |
22149379 |
gatgaccagaaggttaggttggctactcatatgcttgctgaggaggcagagtattagtggactaatgccaaaggaagacttgagatggagggggaggtgg |
22149478 |
T |
|
| Q |
162 |
tgacctaggccaagttcaaggttgaattcttgaggaagtatttcccggaagacttgaggac |
222 |
Q |
| |
|
|||| | ||| | |||||||| || ||||||||||||||||| ||||||| |||||||| |
|
|
| T |
22149479 |
tgacttgggcaaggttcaaggccgagttcttgaggaagtatttttcggaagatttgaggac |
22149539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 258
Target Start/End: Complemental strand, 30150897 - 30150668
Alignment:
| Q |
29 |
atggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgaggaagcagagtactggtggaccaatg |
128 |
Q |
| |
|
|||||| |||| || || |||||||| || | ||||| |||||||| || | || ||||| ||| | |||||||| || ||||| ||||||||||||| |
|
|
| T |
30150897 |
atggagaggatctttcgtgctatggtgactagtgatgatcagaaggtgaggttggctactcacatgcttgctgaggaggctgagtattggtggaccaatg |
30150798 |
T |
|
| Q |
129 |
ccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgaggaagtatttcccggaagacttgaggaccaagaa |
228 |
Q |
| |
|
| ||||| || |||||| | || || || || ||||| | | | | |||||||| ||| || ||||||||||| || || || || |||||||| | ||| |
|
|
| T |
30150797 |
ctaagggaagacttgagattggtggagaggttgtgacttggacaaggttcaaggctgagtttttgaggaagtactttccagaggatttgaggactaggaa |
30150698 |
T |
|
| Q |
229 |
ggaggttgagtttctgaatctgaaacaagg |
258 |
Q |
| |
|
||| || ||||| |||||| |||| ||||| |
|
|
| T |
30150697 |
ggaagtggagttcctgaatttgaagcaagg |
30150668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 258
Target Start/End: Original strand, 8271068 - 8271228
Alignment:
| Q |
98 |
gctgaggaagcagagtactggtggaccaatgccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgagga |
197 |
Q |
| |
|
|||||||| || ||||| |||||||||||||| ||||| || |||||| | || || || || ||||| | | | | |||||||| ||| || ||||||| |
|
|
| T |
8271068 |
gctgaggaggctgagtattggtggaccaatgctaagggaagacttgagattggtggagaggttgtgacttggacaaggttcaaggctgagtttttgagga |
8271167 |
T |
|
| Q |
198 |
agtatttcccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagg |
258 |
Q |
| |
|
|||| || || || || |||||||| | |||||| || ||||| |||||| |||| ||||| |
|
|
| T |
8271168 |
agtactttccagaggatttgaggactaggaaggaagtggagttcctgaatttgaagcaagg |
8271228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0615 (Bit Score: 175; Significance: 3e-94; HSPs: 1)
Name: scaffold0615
Description:
Target: scaffold0615; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 8 - 258
Target Start/End: Original strand, 8732 - 8982
Alignment:
| Q |
8 |
gcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgaggaag |
107 |
Q |
| |
|
|||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||| | |
|
|
| T |
8732 |
gcacagacttggatgcagggtatggagcggattttccgagctatggttacggaagatgaccagaaggtcaggctagcgactcatatgttgactgaggagg |
8831 |
T |
|
| Q |
108 |
cagagtactggtggaccaatgccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgaggaagtatttccc |
207 |
Q |
| |
|
||||| |||||||||| | ||||| || || | |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
8832 |
cagagcactggtggactagcgccaaaggaagacatgagttgggaggtgatgtggtgacctgggctaagttcaaggttgaattcttgaggaagtatttccc |
8931 |
T |
|
| Q |
208 |
ggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagg |
258 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
8932 |
tgaagacttgaggaccaataaggaggttgagtttctgaatctgaaacaagg |
8982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0302 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: scaffold0302
Description:
Target: scaffold0302; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 5 - 211
Target Start/End: Complemental strand, 3374 - 3168
Alignment:
| Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||| |
|
|
| T |
3374 |
ggagcacagacttgggtgcaggggatggagcggattttccgagctatggttacgggagatgaccagaaggttagactggcgactcatatgttgactgagg |
3275 |
T |
|
| Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
| |
|
|||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |
|
|
| T |
3274 |
aagcagagcattggtggaccaatgccaagggaaggcttgagttgggaggtgatgtggtgacctgggctaagttcaaggttgaattcttgaggaagtattt |
3175 |
T |
|
| Q |
205 |
cccggaa |
211 |
Q |
| |
|
||||||| |
|
|
| T |
3174 |
cccggaa |
3168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0218 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: scaffold0218
Description:
Target: scaffold0218; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 29 - 258
Target Start/End: Original strand, 315 - 544
Alignment:
| Q |
29 |
atggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgaggaagcagagtactggtggaccaatg |
128 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||| ||| || ||||||||| ||||||| ||||||||| |||||||||| || | |
|
|
| T |
315 |
atggagcggattttccgagctatggttacgggagatgactagaaggtcaaacttgcaactcatatgctagctgaagaagcagagcactggtggacaaacg |
414 |
T |
|
| Q |
129 |
ccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgaggaagtatttcccggaagacttgaggaccaagaa |
228 |
Q |
| |
|
|||| || ||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
415 |
ccaaaggaaggcttgagttgggaggtgatgtggtgacctgggctacgttcaaggttgaattcttgaggaagtatttcccggaagacttgaggaccaagaa |
514 |
T |
|
| Q |
229 |
ggaggttgagtttctgaatctgaaacaagg |
258 |
Q |
| |
|
|||| |||||||||| |||||||| ||||| |
|
|
| T |
515 |
ggagattgagtttctaaatctgaagcaagg |
544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0120 (Bit Score: 158; Significance: 4e-84; HSPs: 1)
Name: scaffold0120
Description:
Target: scaffold0120; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 5 - 258
Target Start/End: Complemental strand, 26142 - 25890
Alignment:
| Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
| |
|
||||||||||||||||||||||| |||| | ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| | | ||||| |
|
|
| T |
26142 |
ggagcacagacttgggtgcagggtatggggtggattttccgagctatggtgacaggagatgaccagaaggtcagactagcgactcatatgcttgttgagg |
26043 |
T |
|
| Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
| |
|
|||||||| |||||||||| |||||||| || || |||||| |||||||| |||||||||| | ||| |||||||| |||||||||||| |||||||||| |
|
|
| T |
26042 |
aagcagagcactggtggactaatgccaaaggaagacttgagatgggaggtaatgtggtgacttgggctaagttcaaagttgaattcttg-ggaagtattt |
25944 |
T |
|
| Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagg |
258 |
Q |
| |
|
||| ||||||||||| || ||||||||||||||||||||||||||||||||||| |
|
|
| T |
25943 |
ccctgaagacttgagaactaagaaggaggttgagtttctgaatctgaaacaagg |
25890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0610 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: scaffold0610
Description:
Target: scaffold0610; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 5 - 258
Target Start/End: Original strand, 3266 - 3519
Alignment:
| Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||||||||||| ||| | |||||||||||| | |||||| |
|
|
| T |
3266 |
ggagcacagacttgggtgcagggcatggagcggatattccatgctatggtgacgggagatgaccagaaggttagattggcgactcatatgcttactgagg |
3365 |
T |
|
| Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
| |
|
|||| ||| |||||||||| ||||||||||| || ||||| |||||||||| || ||||||| || |||||||| | ||||||||||||||||||||| |
|
|
| T |
3366 |
aagcggagcactggtggactaatgccaagggaagacttgatatgggaggtgaagttgtgacctgggaaaagttcaaagctgaattcttgaggaagtattt |
3465 |
T |
|
| Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagg |
258 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
3466 |
ccctgaagacttgaggaccaagaaggaggttgagtttttgaatctgaaacaagg |
3519 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0673 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold0673
Description:
Target: scaffold0673; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 5 - 258
Target Start/End: Original strand, 4711 - 4963
Alignment:
| Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
| |
|
||||||| |||||||||||||| ||||| | ||||||| ||||| |||| || ||||||||||||||||||||||| |||||||| ||| | ||||||| |
|
|
| T |
4711 |
ggagcacgaacttgggtgcagggcatggaacagattttctgagctgtggtcacaggagatgaccagaaggtcagactggcgactcaaatgcttgctgagg |
4810 |
T |
|
| Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
| |
|
|||||||| ||| || ||| |||| ||| || ||| ||||| ||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||| |
|
|
| T |
4811 |
aagcagagcactagttgactaatgtcaaaggaagg-ttgagatgggaggtgatgtggtgacctgggctaagttcaaggttgaattctagaggaagtattt |
4909 |
T |
|
| Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagg |
258 |
Q |
| |
|
||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
4910 |
ccctgaagacttgaggaccaagaaggagattgagtttctgaatctgaaacaagg |
4963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0011 (Bit Score: 139; Significance: 8e-73; HSPs: 2)
Name: scaffold0011
Description:
Target: scaffold0011; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 5 - 191
Target Start/End: Original strand, 73065 - 73251
Alignment:
| Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
| |
|
||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
73065 |
ggagcacagacttgggtgcagggtatagcgcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgctagccgagg |
73164 |
T |
|
| Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattct |
191 |
Q |
| |
|
|||||||| |||||||||| || ||||| || ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |
|
|
| T |
73165 |
aagcagagcactggtggactaacgccaaaggaaggcttgagttgggaggtgatgtggtgacctgggctaagttcaaggttgaattct |
73251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0011; HSP #2
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 5 - 191
Target Start/End: Original strand, 77446 - 77632
Alignment:
| Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
| |
|
||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
77446 |
ggagcacagacttgggtgcagggtatagcgcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgctagccgagg |
77545 |
T |
|
| Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattct |
191 |
Q |
| |
|
|||||||| |||||||||| || ||||| || ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |
|
|
| T |
77546 |
aagcagagcactggtggactaacgccaaaggaaggcttgagttgggaggtgatgtggtgacctgggctaagttcaaggttgaattct |
77632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0009 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0009
Description:
Target: scaffold0009; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 5 - 258
Target Start/End: Complemental strand, 97489 - 97236
Alignment:
| Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
| |
|
||||| ||||||||||| ||| | ||||||||||| ||||| |||||||| |||||||||||||||||||||||| | |||||||||||| | ||||||| |
|
|
| T |
97489 |
ggagcccagacttgggtacagagcatggagcggatattccgtgctatggtgacgggagatgaccagaaggtcagattggcgactcatatgcttgctgagg |
97390 |
T |
|
| Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
| |
|
|||| ||| | |||||||| |||||||| | || |||||||| || | || || ||||||| | | |||||||| | ||||||||||||||| ||||| |
|
|
| T |
97389 |
aagctgagcagtggtggactaatgccaaaagaagacttgagtttggtgaagaagttgtgacctggacaaagttcaaagctgaattcttgaggaaatattt |
97290 |
T |
|
| Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagg |
258 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
97289 |
ccctgaagacttgaggaccaagaaggaggttgagtttttgaatctgaaacaagg |
97236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0021 (Bit Score: 114; Significance: 7e-58; HSPs: 2)
Name: scaffold0021
Description:
Target: scaffold0021; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 5 - 258
Target Start/End: Complemental strand, 9121 - 8868
Alignment:
| Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
| |
|
|||||||| || ||||||||||| | ||||||||| ||| | |||||||| ||||||| ||| |||||||||| ||| ||||||| |||| | | ||||| |
|
|
| T |
9121 |
ggagcacaaacgtgggtgcagggcacggagcggatattcggtgctatggtgacgggaggtgatcagaaggtcaaactggcgactcgtatgcttgttgagg |
9022 |
T |
|
| Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
| |
|
|||| ||| ||| ||||| |||||||| || || ||||| |||||||| | || ||||||| ||| |||||||| | ||||||||||| ||||||||| |
|
|
| T |
9021 |
aagctgagcactattggactaatgccaaaggaagaattgagatgggaggtaaagttgtgacctgggcgaagttcaaagctgaattcttgatgaagtattt |
8922 |
T |
|
| Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagg |
258 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8921 |
ccctgaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagg |
8868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0021; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 147 - 255
Target Start/End: Complemental strand, 91324 - 91216
Alignment:
| Q |
147 |
tgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgaggaagtatttcccggaagacttgaggaccaagaaggaggttgagtttctgaa |
246 |
Q |
| |
|
||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
91324 |
tgggaggtgatgtggtgacctgggctaagttcaaggttgaattcttgaggaagtatttccctgaagacttgaggaccaagaaggagattgagtttctgaa |
91225 |
T |
|
| Q |
247 |
tctgaaaca |
255 |
Q |
| |
|
||||||||| |
|
|
| T |
91224 |
tctgaaaca |
91216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0465 (Bit Score: 99; Significance: 6e-49; HSPs: 2)
Name: scaffold0465
Description:
Target: scaffold0465; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 5 - 127
Target Start/End: Original strand, 11999 - 12121
Alignment:
| Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
| |
|
||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
11999 |
ggagcacggacttgggtgcaggggatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactggcgactcatatgttgactgagg |
12098 |
T |
|
| Q |
105 |
aagcagagtactggtggaccaat |
127 |
Q |
| |
|
|||||||| |||||||||||||| |
|
|
| T |
12099 |
aagcagagcactggtggaccaat |
12121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0465; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 164 - 258
Target Start/End: Original strand, 12124 - 12218
Alignment:
| Q |
164 |
acctaggccaagttcaaggttgaattcttgaggaagtatttcccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagg |
258 |
Q |
| |
|
|||| ||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
12124 |
acctgggctaagttcaaggttgaattattgaggaagtatttccccgaagacttgaggaccaagaaggagattgagtttctgaatctgaaacaagg |
12218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0162 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0162
Description:
Target: scaffold0162; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 16753 - 16637
Alignment:
| Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||| |||| |
|
|
| T |
16753 |
ggagcacagacttgggtgcagggtatggagcggattttccgagctatggttacgggagatgaccataaggtcagactagcaactcatatgctaggtgaga |
16654 |
T |
|
| Q |
105 |
aagcagagtactggtgg |
121 |
Q |
| |
|
| || ||| |||||||| |
|
|
| T |
16653 |
aggcggagcactggtgg |
16637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 54; Significance: 4e-22; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 106
Target Start/End: Original strand, 16575119 - 16575220
Alignment:
| Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
| |
|
||||||||||||| ||||||||| ||||||||||| |||| || ||||| | |||||||||||||||||||||||| || ||||||||| | ||||||| |
|
|
| T |
16575119 |
ggagcacagacttaggtgcagggcatggagcggatattccatgccatggtgatgggagatgaccagaaggtcagactggcaactcatatgcttgctgagg |
16575218 |
T |
|
| Q |
105 |
aa |
106 |
Q |
| |
|
|| |
|
|
| T |
16575219 |
aa |
16575220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 106
Target Start/End: Complemental strand, 16590543 - 16590442
Alignment:
| Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
| |
|
||||||||||||| ||||||||| ||||||||||| |||| || ||||| | |||||||||||||||||||||||| || ||||||||| | ||||||| |
|
|
| T |
16590543 |
ggagcacagacttaggtgcagggcatggagcggatattccatgccatggtgatgggagatgaccagaaggtcagactggcaactcatatgcttgctgagg |
16590444 |
T |
|
| Q |
105 |
aa |
106 |
Q |
| |
|
|| |
|
|
| T |
16590443 |
aa |
16590442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 258
Target Start/End: Complemental strand, 7827800 - 7827571
Alignment:
| Q |
29 |
atggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgaggaagcagagtactggtggaccaatg |
128 |
Q |
| |
|
|||||| |||| || || |||||||| || | ||||| |||||||| || | || ||||| ||| | |||||||| || ||||| ||||||||||||| |
|
|
| T |
7827800 |
atggagaggatctttcgtgctatggtgactagtgatgatcagaaggtgaggttggctactcacatgcttgctgaggaggctgagtattggtggaccaatg |
7827701 |
T |
|
| Q |
129 |
ccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgaggaagtatttcccggaagacttgaggaccaagaa |
228 |
Q |
| |
|
| ||||| || |||||| | || || || || ||||| | | | | |||||||| ||| || ||||||||||| || || || || |||||||| | ||| |
|
|
| T |
7827700 |
ctaagggaagacttgagattggtggagaggttgtgacttggacaaggttcaaggctgagtttttgaggaagtactttccagaggatttgaggactaggaa |
7827601 |
T |
|
| Q |
229 |
ggaggttgagtttctgaatctgaaacaagg |
258 |
Q |
| |
|
||| || ||||| |||||| |||| ||||| |
|
|
| T |
7827600 |
ggaagtggagttcctgaatttgaagcaagg |
7827571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 258
Target Start/End: Original strand, 27104144 - 27104373
Alignment:
| Q |
29 |
atggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgaggaagcagagtactggtggaccaatg |
128 |
Q |
| |
|
|||||| |||| || || |||||||| || | ||||| |||||||| || | || ||||| ||| | |||||||| || ||||| ||||||||||||| |
|
|
| T |
27104144 |
atggagaggatctttcgtgctatggtgactagtgatgatcagaaggtgaggttggctactcacatgcttgctgaggaggctgagtattggtggaccaatg |
27104243 |
T |
|
| Q |
129 |
ccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgaggaagtatttcccggaagacttgaggaccaagaa |
228 |
Q |
| |
|
| ||||| || |||||| | || || || || ||||| | | | | |||||||| ||| || ||||||||||| || || || || |||||||| | ||| |
|
|
| T |
27104244 |
ctaagggaagacttgagattggtggagaggttgtgacttggacaaggttcaaggctgagtttttgaggaagtactttccagaggatttgaggactaggaa |
27104343 |
T |
|
| Q |
229 |
ggaggttgagtttctgaatctgaaacaagg |
258 |
Q |
| |
|
||| || ||||| |||||| |||| ||||| |
|
|
| T |
27104344 |
ggaagtggagttcctgaatttgaagcaagg |
27104373 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 258
Target Start/End: Complemental strand, 27174112 - 27173952
Alignment:
| Q |
98 |
gctgaggaagcagagtactggtggaccaatgccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggttgaattcttgagga |
197 |
Q |
| |
|
|||||||| || ||||| |||||||||||||| ||||| || |||||| | || || || || ||||| | | | | |||||||| ||| || ||||||| |
|
|
| T |
27174112 |
gctgaggaggctgagtattggtggaccaatgctaagggaagacttgagattggtggagaggttgtgacttggacaaggttcaaggctgagtttttgagga |
27174013 |
T |
|
| Q |
198 |
agtatttcccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagg |
258 |
Q |
| |
|
|||| || || || || |||||||| | |||||| || ||||| |||||| |||| ||||| |
|
|
| T |
27174012 |
agtactttccagaggatttgaggactaggaaggaagtggagttcctgaatttgaagcaagg |
27173952 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0049 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0049
Description:
Target: scaffold0049; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 145
Target Start/End: Original strand, 35513 - 35653
Alignment:
| Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
| |
|
||||| ||||| |||||||| || |||||| |||| ||||| |||||||| || | ||||| ||||||||||| | || || || ||| | ||||||| |
|
|
| T |
35513 |
ggagctcagacatgggtgcaaggcatggagaggatcttccgtgctatggtgactagtgatgatcagaaggtcaggttggctacccacatgcttgctgagg |
35612 |
T |
|
| Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgag |
145 |
Q |
| |
|
|||| |||| |||||||| ||||| ||||| || |||||| |
|
|
| T |
35613 |
aagctgagttttggtggactaatgctaaggggagacttgag |
35653 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0124 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0124
Description:
Target: scaffold0124; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 85 - 258
Target Start/End: Original strand, 4226 - 4399
Alignment:
| Q |
85 |
gactcatatgttagctgaggaagcagagtactggtggaccaatgccaagggcaggcttgagttgggaggtgatgtggtgacctaggccaagttcaaggtt |
184 |
Q |
| |
|
|||||| ||| ||||| ||||||||||||| |||||||| ||||| ||||| || |||||| | || || || || ||||| | | | |||||||| | |
|
|
| T |
4226 |
gactcacatggtagctaaggaagcagagtattggtggactaatgctaagggaagacttgagattggtggggaggttgtgacttggataaggttcaaggct |
4325 |
T |
|
| Q |
185 |
gaattcttgaggaagtatttcccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagg |
258 |
Q |
| |
|
|| || ||||||||||| || || || || ||||| || | |||||| || ||||| |||||| |||| ||||| |
|
|
| T |
4326 |
gagtttttgaggaagtactttccagaggatttgagaactaggaaggaagtggagttcctgaatttgaagcaagg |
4399 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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