View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0755_low_146 (Length: 252)
Name: NF0755_low_146
Description: NF0755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0755_low_146 |
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Alignment Details
Target: chr5 (Bit Score: 159; Significance: 9e-85; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 13 - 179
Target Start/End: Complemental strand, 42683095 - 42682929
Alignment:
| Q |
13 |
acagacacctatgagacccagtagagaaatctcacattctgtgttagcttgtctggtattccatatccttaaaccaaaaaccaatattgcaattgaaaca |
112 |
Q |
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| T |
42683095 |
acagacacctatgagacccagtagagaaatctcacattctgtgttagcttgtctggtattccatatccttaaaccaaaaaccaatattgcaattgaaaca |
42682996 |
T |
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| Q |
113 |
aacaatgttaagatgttcacgatttggatcaagatgttgcataattgatcattcttgtatttgtcac |
179 |
Q |
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||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
42682995 |
aacaatgttaagacgttcacgatttggatcaagatgttgcataattgaccattcttgtatttgtcac |
42682929 |
T |
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