View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0755_low_149 (Length: 251)
Name: NF0755_low_149
Description: NF0755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0755_low_149 |
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Alignment Details
Target: chr3 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 17 - 246
Target Start/End: Complemental strand, 42898203 - 42897974
Alignment:
| Q |
17 |
tatcaaatactattgttggaatctgaattaagcgctcgtaccaaaattgctatgctccaaagaacatatctgtttttcacttaactggttagtaattctg |
116 |
Q |
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| T |
42898203 |
tatcaaatactattgttggaatctgaattaagcgctcgtaccaaaattgctatgctccaaagaacatatctgtttttcacttaactggttagtaattctg |
42898104 |
T |
|
| Q |
117 |
agttttacattctttgtatttaggtgttgaaatgggtagaatttgctgaaaccttgcttgtttctcttgacgaatgctttgagattctcaagagattaaa |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||| |
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| T |
42898103 |
agttttacattctttgtatttaggtgttgaaatgggtagaatttgcagaaaccttgcctgtttctcttgacggatgctttgagattctcaagagattaaa |
42898004 |
T |
|
| Q |
217 |
cgatgaactatctggaaagtctctgctcct |
246 |
Q |
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|||||||||||||||||||||| ||||||| |
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| T |
42898003 |
cgatgaactatctggaaagtctgtgctcct |
42897974 |
T |
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