View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0755_low_151 (Length: 251)
Name: NF0755_low_151
Description: NF0755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0755_low_151 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 22 - 251
Target Start/End: Original strand, 39057219 - 39057448
Alignment:
| Q |
22 |
catcatcttcaaaacaaaacaccacacacactccaacgttaatccatcaaaaacccatttcaatctttgtttcattcatccaaagttctcaactttttca |
121 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
39057219 |
catcatcttcaaaacaaaacaccacacacactccaacgttaatccatcaaaaacccatttcaatctttgtttcattcatccaaagttctcgactttttca |
39057318 |
T |
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| Q |
122 |
caaaaacatcgtcagattctcttcaaccgatgcaaacaccgtttcagaattcattcatgtttgttttatgtaatcatcgtttccatgcttttctataatc |
221 |
Q |
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|||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39057319 |
caaaaacatcatcagattctcttcaaccgatgcaaacactgtttcagaattcattcatgtttgttttatgtaatcatcgtttccatgcttttctataatc |
39057418 |
T |
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| Q |
222 |
cgatctgttacgatcgtaatgccactcatc |
251 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
39057419 |
cgatctgttacgatcgtaatgccactcatc |
39057448 |
T |
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