View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0755_low_154 (Length: 251)

Name: NF0755_low_154
Description: NF0755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0755_low_154
NF0755_low_154
[»] chr3 (35 HSPs)
chr3 (87-251)||(13769362-13769526)
chr3 (109-251)||(45443171-45443313)
chr3 (109-245)||(54368930-54369066)
chr3 (109-251)||(41380615-41380757)
chr3 (109-251)||(27219220-27219362)
chr3 (108-251)||(4256124-4256267)
chr3 (109-235)||(4255401-4255527)
chr3 (109-250)||(34715527-34715668)
chr3 (106-245)||(44573214-44573353)
chr3 (109-245)||(43101448-43101584)
chr3 (108-228)||(44573845-44573965)
chr3 (109-230)||(24860152-24860273)
chr3 (108-245)||(44573532-44573666)
chr3 (109-245)||(50203934-50204066)
chr3 (109-241)||(48685398-48685531)
chr3 (109-251)||(14170070-14170212)
chr3 (109-251)||(46139124-46139265)
chr3 (144-245)||(47833739-47833839)
chr3 (109-230)||(662619-662738)
chr3 (111-200)||(9658193-9658282)
chr3 (161-245)||(3985716-3985800)
chr3 (109-237)||(34250437-34250564)
chr3 (14-75)||(13769620-13769681)
chr3 (109-178)||(3985618-3985687)
chr3 (108-156)||(4255760-4255808)
chr3 (108-156)||(4255942-4255990)
chr3 (173-229)||(54861480-54861536)
chr3 (138-229)||(31603898-31603988)
chr3 (171-237)||(51917833-51917899)
chr3 (109-237)||(351072-351202)
chr3 (108-207)||(50070545-50070642)
chr3 (15-69)||(20691293-20691347)
chr3 (201-235)||(24539136-24539170)
chr3 (40-69)||(25074788-25074817)
chr3 (14-67)||(52067069-52067122)
[»] chr7 (39 HSPs)
chr7 (109-245)||(257344-257480)
chr7 (109-251)||(43167964-43168106)
chr7 (108-243)||(41670758-41670893)
chr7 (109-251)||(1663676-1663817)
chr7 (108-245)||(1661268-1661405)
chr7 (108-245)||(40121695-40121832)
chr7 (109-245)||(7135320-7135456)
chr7 (109-245)||(28909923-28910059)
chr7 (109-245)||(41670475-41670610)
chr7 (109-205)||(40122043-40122139)
chr7 (108-226)||(30296519-30296637)
chr7 (111-202)||(29780352-29780443)
chr7 (109-225)||(3973052-3973167)
chr7 (109-230)||(41709910-41710030)
chr7 (162-229)||(29780091-29780158)
chr7 (109-230)||(23721035-23721155)
chr7 (112-250)||(8584999-8585123)
chr7 (112-237)||(28358978-28359103)
chr7 (171-230)||(32000770-32000829)
chr7 (108-227)||(39079724-39079842)
chr7 (171-229)||(10406679-10406737)
chr7 (108-237)||(41389198-41389325)
chr7 (129-237)||(12840657-12840764)
chr7 (171-207)||(14092016-14092052)
chr7 (171-207)||(14402034-14402070)
chr7 (109-153)||(21033978-21034022)
chr7 (171-207)||(30610921-30610957)
chr7 (153-237)||(41387465-41387549)
chr7 (111-230)||(12305148-12305266)
chr7 (104-166)||(37272176-37272237)
chr7 (108-149)||(33582383-33582424)
chr7 (112-207)||(422776-422869)
chr7 (199-245)||(31149039-31149084)
chr7 (199-245)||(31167331-31167376)
chr7 (104-153)||(43288176-43288225)
chr7 (109-153)||(21048862-21048906)
chr7 (111-207)||(30899095-30899190)
chr7 (201-245)||(37272122-37272166)
chr7 (41-69)||(38134437-38134465)
[»] chr6 (35 HSPs)
chr6 (100-251)||(24055180-24055331)
chr6 (109-245)||(1408902-1409038)
chr6 (109-251)||(10418409-10418551)
chr6 (109-251)||(10733509-10733651)
chr6 (108-245)||(21067134-21067271)
chr6 (109-245)||(1744919-1745055)
chr6 (109-251)||(19054384-19054526)
chr6 (108-245)||(21088925-21089062)
chr6 (111-251)||(21043852-21043992)
chr6 (108-251)||(8143908-8144050)
chr6 (108-245)||(19753681-19753818)
chr6 (104-251)||(12134554-12134701)
chr6 (111-245)||(22911251-22911385)
chr6 (111-245)||(22889645-22889779)
chr6 (114-251)||(28068490-28068626)
chr6 (109-245)||(30539126-30539262)
chr6 (108-245)||(22874920-22875057)
chr6 (111-229)||(17096791-17096910)
chr6 (109-230)||(32215799-32215920)
chr6 (109-245)||(31950-32084)
chr6 (108-230)||(1205956-1206077)
chr6 (108-229)||(32216112-32216233)
chr6 (109-230)||(9602079-9602199)
chr6 (108-230)||(1205642-1205763)
chr6 (171-228)||(130761-130819)
chr6 (178-229)||(12308584-12308635)
chr6 (128-190)||(5252641-5252703)
chr6 (173-235)||(9156188-9156250)
chr6 (37-67)||(17422288-17422318)
chr6 (37-69)||(10760872-10760904)
chr6 (154-237)||(16509712-16509796)
chr6 (15-67)||(19602214-19602266)
chr6 (199-235)||(26809252-26809288)
chr6 (33-65)||(31290549-31290581)
chr6 (39-67)||(34625732-34625760)
[»] chr1 (30 HSPs)
chr1 (108-251)||(31305601-31305744)
chr1 (109-235)||(33879865-33879991)
chr1 (109-235)||(33964264-33964390)
chr1 (109-245)||(20735413-20735549)
chr1 (116-251)||(8520164-8520299)
chr1 (109-251)||(17419678-17419820)
chr1 (109-245)||(35926299-35926434)
chr1 (109-214)||(8520343-8520448)
chr1 (108-245)||(19937120-19937257)
chr1 (108-230)||(45264553-45264675)
chr1 (109-245)||(4022202-4022338)
chr1 (109-229)||(15013416-15013536)
chr1 (108-245)||(2697408-2697545)
chr1 (109-236)||(6868025-6868151)
chr1 (177-251)||(43423238-43423312)
chr1 (169-251)||(37600822-37600905)
chr1 (108-204)||(41590346-41590440)
chr1 (109-236)||(51515606-51515733)
chr1 (114-229)||(34626867-34626981)
chr1 (109-207)||(14623099-14623196)
chr1 (108-237)||(18998602-18998730)
chr1 (109-230)||(19459615-19459735)
chr1 (108-145)||(37600787-37600824)
chr1 (111-208)||(7465371-7465466)
chr1 (112-205)||(19810814-19810906)
chr1 (110-207)||(19811126-19811222)
chr1 (109-158)||(43423193-43423242)
chr1 (188-237)||(51188899-51188948)
chr1 (199-237)||(35892002-35892040)
chr1 (171-207)||(40566381-40566417)
[»] chr2 (29 HSPs)
chr2 (109-245)||(43169133-43169269)
chr2 (108-245)||(21213962-21214099)
chr2 (109-251)||(7877735-7877877)
chr2 (109-251)||(21214272-21214414)
chr2 (108-245)||(43195674-43195811)
chr2 (117-245)||(18901941-18902069)
chr2 (109-245)||(17509000-17509136)
chr2 (109-245)||(3977080-3977216)
chr2 (109-245)||(42768409-42768545)
chr2 (109-251)||(30166150-30166292)
chr2 (108-245)||(3976232-3976369)
chr2 (109-245)||(5424833-5424969)
chr2 (108-245)||(3976548-3976684)
chr2 (109-245)||(23054217-23054353)
chr2 (109-245)||(25441587-25441723)
chr2 (111-245)||(11968947-11969079)
chr2 (109-245)||(6183443-6183586)
chr2 (125-251)||(15820172-15820298)
chr2 (109-228)||(10849585-10849704)
chr2 (109-245)||(43688498-43688635)
chr2 (108-182)||(3976827-3976901)
chr2 (109-231)||(18183358-18183479)
chr2 (172-230)||(3003999-3004057)
chr2 (172-230)||(11339788-11339846)
chr2 (172-203)||(887738-887769)
chr2 (40-69)||(10535790-10535819)
chr2 (28-69)||(31026682-31026723)
chr2 (171-207)||(21373936-21373972)
chr2 (41-69)||(40681982-40682010)
[»] chr4 (52 HSPs)
chr4 (106-245)||(53740070-53740209)
chr4 (108-245)||(15665042-15665180)
chr4 (108-245)||(32988347-32988484)
chr4 (109-245)||(29734452-29734588)
chr4 (109-245)||(50857903-50858039)
chr4 (109-245)||(52214506-52214642)
chr4 (108-251)||(29669434-29669576)
chr4 (109-235)||(45427339-45427465)
chr4 (108-245)||(45427013-45427150)
chr4 (108-245)||(50858218-50858355)
chr4 (108-251)||(990929-991070)
chr4 (108-251)||(29669749-29669891)
chr4 (108-245)||(53738285-53738422)
chr4 (109-245)||(36558543-36558679)
chr4 (108-245)||(23018360-23018497)
chr4 (114-245)||(56509504-56509636)
chr4 (108-245)||(43972245-43972382)
chr4 (108-198)||(990731-990821)
chr4 (112-245)||(43971933-43972066)
chr4 (109-245)||(53739748-53739893)
chr4 (153-251)||(991139-991237)
chr4 (100-230)||(48843109-48843239)
chr4 (109-245)||(51469377-51469508)
chr4 (109-245)||(22866975-22867111)
chr4 (153-251)||(990482-990580)
chr4 (108-245)||(49544225-49544359)
chr4 (108-200)||(18862547-18862642)
chr4 (109-175)||(17222783-17222849)
chr4 (171-245)||(51470435-51470510)
chr4 (193-245)||(13254358-13254410)
chr4 (111-230)||(46332625-46332744)
chr4 (109-180)||(13254295-13254366)
chr4 (171-230)||(30491043-30491102)
chr4 (163-237)||(23311555-23311628)
chr4 (107-237)||(54595146-54595275)
chr4 (133-230)||(26942679-26942775)
chr4 (171-207)||(44898837-44898873)
chr4 (109-229)||(52043171-52043290)
chr4 (171-236)||(3137720-3137784)
chr4 (128-200)||(3137285-3137356)
chr4 (15-63)||(56049851-56049899)
chr4 (204-251)||(17222737-17222784)
chr4 (171-237)||(48046309-48046376)
chr4 (171-237)||(3137029-3137095)
chr4 (199-245)||(34206071-34206117)
chr4 (178-228)||(42788090-42788140)
chr4 (40-69)||(7012065-7012094)
chr4 (173-230)||(26942464-26942521)
chr4 (109-166)||(33385178-33385234)
chr4 (41-69)||(14465325-14465353)
chr4 (41-69)||(18513272-18513300)
chr4 (108-144)||(32784306-32784342)
[»] chr8 (26 HSPs)
chr8 (109-251)||(18905747-18905889)
chr8 (109-251)||(36997057-36997199)
chr8 (109-243)||(31766892-31767026)
chr8 (109-251)||(21085219-21085361)
chr8 (109-245)||(20298593-20298729)
chr8 (109-245)||(23027905-23028041)
chr8 (109-245)||(32931297-32931428)
chr8 (109-245)||(21653217-21653354)
chr8 (109-223)||(3184002-3184116)
chr8 (107-245)||(23027582-23027720)
chr8 (114-245)||(21653700-21653831)
chr8 (112-244)||(40754338-40754471)
chr8 (109-241)||(22277415-22277547)
chr8 (108-237)||(38886992-38887120)
chr8 (111-237)||(26639004-26639130)
chr8 (171-245)||(30590401-30590475)
chr8 (109-229)||(44933174-44933291)
chr8 (111-207)||(39590593-39590687)
chr8 (108-229)||(25971316-25971437)
chr8 (109-230)||(28488424-28488544)
chr8 (199-245)||(34248340-34248386)
chr8 (108-152)||(27402559-27402603)
chr8 (108-166)||(34248275-34248332)
chr8 (199-245)||(36994009-36994055)
chr8 (172-237)||(26642541-26642606)
chr8 (171-207)||(30005578-30005614)
[»] chr5 (31 HSPs)
chr5 (109-245)||(13843588-13843724)
chr5 (108-235)||(27760281-27760408)
chr5 (108-251)||(1028164-1028306)
chr5 (110-245)||(27759967-27760102)
chr5 (108-245)||(13843903-13844040)
chr5 (115-251)||(20811351-20811487)
chr5 (115-251)||(20837706-20837842)
chr5 (109-245)||(28010193-28010329)
chr5 (109-251)||(37995705-37995847)
chr5 (107-245)||(17016170-17016306)
chr5 (109-245)||(873773-873908)
chr5 (109-251)||(12595183-12595316)
chr5 (109-230)||(24918055-24918176)
chr5 (109-245)||(38131658-38131791)
chr5 (109-230)||(24993963-24994084)
chr5 (108-245)||(28009874-28010011)
chr5 (112-229)||(4796253-4796369)
chr5 (109-245)||(17435315-17435451)
chr5 (109-237)||(31973519-31973646)
chr5 (115-237)||(16275140-16275260)
chr5 (108-230)||(31973217-31973338)
chr5 (171-237)||(904838-904904)
chr5 (23-69)||(2039880-2039926)
chr5 (109-143)||(30588224-30588258)
chr5 (201-245)||(29432395-29432439)
chr5 (38-69)||(28296325-28296356)
chr5 (40-69)||(2577211-2577240)
chr5 (37-69)||(11596486-11596518)
chr5 (172-236)||(15844310-15844374)
chr5 (177-237)||(30587871-30587931)
chr5 (37-69)||(39424637-39424669)
[»] scaffold0054 (1 HSPs)
scaffold0054 (111-245)||(11104-11238)
[»] scaffold0099 (1 HSPs)
scaffold0099 (128-214)||(30602-30689)
[»] scaffold0025 (1 HSPs)
scaffold0025 (41-72)||(23852-23883)


Alignment Details
Target: chr3 (Bit Score: 137; Significance: 1e-71; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 87 - 251
Target Start/End: Complemental strand, 13769526 - 13769362
Alignment:
Q  87 tgtttagtgagtgattgaaaggtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcct 186  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  13769526 tgtttagtgagtgattgaacggtgttggaaattccgctttaattgcggtccgcccctagtcgcctaaattgcaacctttggttagccttcattgcagcct 13769427  T
Q  187 ccaacaccttcattgtgttggctttgagagggtggatttagtcctacattggatagataccactc 251  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||    
T  13769426 ccaacaccttcattgtgttggctttgagggggtggatttagtcccacattggatagatagcactc 13769362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 109 - 251
Target Start/End: Original strand, 45443171 - 45443313
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45443171 tgttggaaattccgccttaattgcggtccgcccctagtcgcctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 45443270  T
Q  209 tttgagagggtggatttagtcctacattggatagataccactc 251  Q
    |||||| ||||||||||||||| |||||||||||||| |||||    
T  45443271 tttgagggggtggatttagtcccacattggatagatagcactc 45443313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 109 - 245
Target Start/End: Original strand, 54368930 - 54369066
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54368930 tgttggaaattccgccttaattgcggtccgcccctagtcgcctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 54369029  T
Q  209 tttgagagggtggatttagtcctacattggatagata 245  Q
    |||||| ||||||||||||||| |||| |||||||||    
T  54369030 tttgagggggtggatttagtcccacatcggatagata 54369066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 109 - 251
Target Start/End: Original strand, 41380615 - 41380757
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    |||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41380615 tgttggaaattccgccttaattgcggcccgcccctagtcgccttaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 41380714  T
Q  209 tttgagagggtggatttagtcctacattggatagataccactc 251  Q
    |||||| ||||||||||||||| |||| ||||||||| |||||    
T  41380715 tttgagggggtggatttagtcccacatcggatagatagcactc 41380757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 109 - 251
Target Start/End: Original strand, 27219220 - 27219362
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||    
T  27219220 tgttggaaattccgccttaattgcggtccgcccctagtcgcctaaattgcgacctttggttagccgtaattgcagcctccaacaccttcatcgtgttggc 27219319  T
Q  209 tttgagagggtggatttagtcctacattggatagataccactc 251  Q
    |||||| ||||||||||||||| |||| ||||||||| |||||    
T  27219320 tttgagggggtggatttagtcccacatcggatagatagcactc 27219362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 108 - 251
Target Start/End: Original strand, 4256124 - 4256267
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4256124 gtgttggaaattccgccttaattgcggtccccccctagtcgcctaaattgcaacctttggttagccttcattgcagcctccaacacctttattgtgttgg 4256223  T
Q  208 ctttgagagggtggatttagtcctacattggatagataccactc 251  Q
    ||||||| ||||||||||||||| |||| |||| |||| |||||    
T  4256224 ctttgagggggtggatttagtcccacatcggatggataacactc 4256267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 4255401 - 4255527
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  4255401 tgttggaaattccgccttaattgcggtccgcccctagtcgcctaaattgggacctttggttagccttcattgtagcctccaacaccttcattgtgttggc 4255500  T
Q  209 tttgagagggtggatttagtcctacat 235  Q
    |||||| ||||||||||||||| ||||    
T  4255501 tttgagggggtggatttagtcccacat 4255527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 109 - 250
Target Start/End: Complemental strand, 34715668 - 34715527
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    |||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  34715668 tgtttgaaattccgccttaattgcgttccgcccctagtcgcctaaattgcgacctttggttagccttcatcgcagcctccaacaccttcactgtgttggc 34715569  T
Q  209 tttgagagggtggatttagtcctacattggatagataccact 250  Q
    |||||| ||||||||||||||| |||| ||||||||| ||||    
T  34715568 tttgagggggtggatttagtcccacatcggatagatagcact 34715527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 106 - 245
Target Start/End: Original strand, 44573214 - 44573353
Alignment:
Q  106 aggtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgtt 205  Q
    |||||||||||||||||||||| ||||| |||||||| |||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  44573214 aggtgttggaaattccgccttagttgcgatccgcccccagtcgcctaaattgcgaccttcggttagccttaattgcagcctccaacaccttcattgtgtt 44573313  T
Q  206 ggctttgagagggtggatttagtcctacattggatagata 245  Q
    ||||||||| ||||||||||||||| |||| |||||||||    
T  44573314 ggctttgagggggtggatttagtcccacatcggatagata 44573353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 109 - 245
Target Start/End: Complemental strand, 43101584 - 43101448
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    |||||||||||| |||||||||| |||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  43101584 tgttggaaattctgccttaattgaggtccgtccctagtcgcctaaattgcgacctttggttggccttcattgcagcctccaacaccttcattgtgttggc 43101485  T
Q  209 tttgagagggtggatttagtcctacattggatagata 245  Q
    |||||| ||||||||||||||| ||||  ||||||||    
T  43101484 tttgagggggtggatttagtcccacatcagatagata 43101448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 108 - 228
Target Start/End: Original strand, 44573845 - 44573965
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  44573845 gtgttagaaattccgccttaattgcggtccgcccctagtcgcctaaattgcgaccttcggttagccttaattgcagcctccaacaccttcattgtgttgg 44573944  T
Q  208 ctttgagagggtggatttagt 228  Q
    ||||||| |||||||||||||    
T  44573945 ctttgagggggtggatttagt 44573965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 24860273 - 24860152
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    |||||||||||| ||||| |||||||||||||||||||  ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  24860273 tgttggaaattctgcctttattgcggtccgcccctagttgcctaaattgcggcctttggtttgccttcattgcagcctccaacaccttcattgtgttggc 24860174  T
Q  209 tttgagagggtggatttagtcc 230  Q
    |||||| |||||||||||||||    
T  24860173 tttgagggggtggatttagtcc 24860152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 108 - 245
Target Start/End: Original strand, 44573532 - 44573666
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||   |||||||||||    
T  44573532 gtgttggagattccgccttaattgcggtccgcccctagtcgcctaaattgcgaccttcggttagccttaattgcagcctccaacac---cattgtgttgg 44573628  T
Q  208 ctttgagagggtggatttagtcctacattggatagata 245  Q
    ||||||| ||||||||||||||| ||||  ||||||||    
T  44573629 ctttgagggggtggatttagtcccacataagatagata 44573666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 109 - 245
Target Start/End: Complemental strand, 50204066 - 50203934
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||||||||||||||||    ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50204066 tgttggaaattccgcctt----gcggtccgcccctagtcgcctaaattgtgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 50203971  T
Q  209 tttgagagggtggatttagtcctacattggatagata 245  Q
    |||||| |||||| |||||||  |||| |||||||||    
T  50203970 tttgagggggtgggtttagtctcacatcggatagata 50203934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 109 - 241
Target Start/End: Complemental strand, 48685531 - 48685398
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    |||||||||||| ||||||||||||||||||| |||||| ||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||    
T  48685531 tgttggaaattctgccttaattgcggtccgcctctagtcgcctaaattgtgacctttggttagttttcattgcagcctccaacaccttcattgtgttggc 48685432  T
Q  209 tttga-gagggtggatttagtcctacattggata 241  Q
    ||||| | ||||||||||||||| |||| |||||    
T  48685431 tttgaggggggtggatttagtcccacatcggata 48685398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 109 - 251
Target Start/End: Complemental strand, 14170212 - 14170070
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    |||||||| ||||||||| ||||||| |||||||||| | ||||||||||| | ||||||| ||||||||||||||||||| ||||||||||||||||||    
T  14170212 tgttggaagttccgcctttattgcggcccgcccctagccgcctaaattgcggcatttggtttgccttcattgcagcctccatcaccttcattgtgttggc 14170113  T
Q  209 tttgagagggtggatttagtcctacattggatagataccactc 251  Q
    |||||| || |||||||||||| |||| ||||| ||| |||||    
T  14170112 tttgaggggctggatttagtcccacatcggataaataacactc 14170070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 109 - 251
Target Start/End: Original strand, 46139124 - 46139265
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||||||||||| ||||||||| |||||  |||||||| ||||||||| ||  ||||||||| |||||||||| ||||||||| |||||||||||||||    
T  46139124 tgttggaaattccaccttaattg-ggtccatccctagtcgcctaaattgtgatatttggttagtcttcattgcaacctccaacatcttcattgtgttggc 46139222  T
Q  209 tttgagagggtggatttagtcctacattggatagataccactc 251  Q
    |||||| ||||| ||||||| | |||||||||||||| |||||    
T  46139223 tttgagggggtgaatttagttccacattggatagataacactc 46139265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 144 - 245
Target Start/End: Complemental strand, 47833839 - 47833739
Alignment:
Q  144 agtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggctttgagagggtggatttagtcctacattggataga 243  Q
    |||| ||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||| ||||||||||||||| |||| |||||||    
T  47833839 agtcgcctaaattgcgacctttggttagccttaattgcagccaccaacaccttccttgtgttggctttgag-gggtggatttagtcccacatcggataga 47833741  T
Q  244 ta 245  Q
    ||    
T  47833740 ta 47833739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 662619 - 662738
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||| ||||| | ||||| | |||||||||||||||||||||||||| ||||||||||     
T  662619 tgttggaaattccgcct-aattgcggtccgcccctagtcgcctaa-ttgcgccatttgggttgccttcattgcagcctccaacacctttattgtgttggg 662716  T
Q  209 tttgagagggtggatttagtcc 230  Q
    |||||  |||| ||||||||||    
T  662717 tttgaaggggtcgatttagtcc 662738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 111 - 200
Target Start/End: Original strand, 9658193 - 9658282
Alignment:
Q  111 ttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcatt 200  Q
    |||||||||||||||||||||| ||| |||||||||| ||||||||||  |||||||||| |||||||||||||||||||||||||||||    
T  9658193 ttggaaattccgccttaattgctgtcagcccctagtcgcctaaattgcagcctttggttaaccttcattgcagcctccaacaccttcatt 9658282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 161 - 245
Target Start/End: Original strand, 3985716 - 3985800
Alignment:
Q  161 cctttggttagccttcattgcagcctccaacaccttcattgtgttggctttgagagggtggatttagtcctacattggatagata 245  Q
    ||||||||| |||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||| |||||||||    
T  3985716 cctttggtttgccttcatagcagcctccaacaccttcactgtgttggctttgagggggtggatttagtcccacatcggatagata 3985800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 109 - 237
Target Start/End: Complemental strand, 34250564 - 34250437
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    |||||||||||||||||||||||||||| || ||||| | ||||| ||||||| ||||| | |||||||||||||||||||||||||| |||||||| |     
T  34250564 tgttggaaattccgccttaattgcggtcagctcctagccgcctaa-ttgcgacatttgggttgccttcattgcagcctccaacaccttaattgtgttagg 34250466  T
Q  209 tttgagagggtggatttagtcctacattg 237  Q
    |||||  ||||| |||| |||| ||||||    
T  34250465 tttgaaggggtgaatttcgtcccacattg 34250437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 75
Target Start/End: Complemental strand, 13769681 - 13769620
Alignment:
Q  14 agacaccggacacaacacggattcgtcgacaccgataataatttgagaaaatgacaattcta 75  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  13769681 agacaccggacgcaacacggattcgtcgacaccgataataatttgagaaaatgataattcta 13769620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 109 - 178
Target Start/End: Original strand, 3985618 - 3985687
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcat 178  Q
    |||||||||||| ||||||||||| |||||||||||||| ||| ||||||| ||||||||| ||||||||    
T  3985618 tgttggaaattctgccttaattgcagtccgcccctagtcgccttaattgcggcctttggtttgccttcat 3985687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 4255760 - 4255808
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaatt 156  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4255760 gtgttggaaattccgccttaattgcggtccgcccctagtcgcctaaatt 4255808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 4255942 - 4255990
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaatt 156  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  4255942 gtgttgggaattccgccttaattgcggtccgcccctagtcgcctaaatt 4255990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 229
Target Start/End: Original strand, 54861480 - 54861536
Alignment:
Q  173 cttcattgcagcctccaacaccttcattgtgttggctttgagagggtggatttagtc 229  Q
    ||||||||||||||||||||||||| ||||||||| | |||  ||||||||||||||    
T  54861480 cttcattgcagcctccaacaccttcgttgtgttgggtgtgaaggggtggatttagtc 54861536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 229
Target Start/End: Original strand, 31603898 - 31603988
Alignment:
Q  138 gcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggctttgagagggtggatttagtc 229  Q
    |||||||||| ||||| ||||||  ||||| |  |||| |||||||||||||| ||||||||||||||  ||||||| ||| ||||||||||    
T  31603898 gcccctagtcgcctaa-ttgcgatatttgggttacctttattgcagcctccaaaaccttcattgtgttacctttgagggggcggatttagtc 31603988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 51917833 - 51917899
Alignment:
Q  171 gccttcattgcagcctccaacaccttcattgtgttggctttgagagggtggatttagtcctacattg 237  Q
    |||||||||||| ||| |||| |||||||| |||||  | ||| |||||||||||||||||||||||    
T  51917833 gccttcattgcaaccttcaacgccttcattatgttgagtgtgaaagggtggatttagtcctacattg 51917899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 237
Target Start/End: Original strand, 351072 - 351202
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaaca---ccttcattgtgtt 205  Q
    |||||||| |||||||||  ||||| ||| ||||||||| ||||| ||||| | |||| || ||||| |||||||||| ||| |   |||||||||||||    
T  351072 tgttggaatttccgccttcgttgcgttccacccctagtcgcctaa-ttgcggcatttgttttgccttaattgcagccttcaataataccttcattgtgtt 351170  T
Q  206 ggctttgagagggtggatttagtcctacattg 237  Q
    |  |||||  |||||| |||||||| ||||||    
T  351171 gagtttgaaggggtggctttagtcccacattg 351202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 207
Target Start/End: Original strand, 50070545 - 50070642
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    |||||||||||| |||||| |||| ||||| ||| ||| ||||||| ||||  | ||||| || ||||||||||||||||| ||||||||| ||| ||||    
T  50070545 gtgttggaaatttcgccttcattgtggtccaccc-tagccacctaa-ttgcagcatttgggtatccttcattgcagcctcctacaccttcaatgtattgg 50070642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 20691293 - 20691347
Alignment:
Q  15 gacaccggacacaacacggattcgtcgacaccgataataatttgagaaaatgaca 69  Q
    ||||||||||||||||| ||  ||| || || |||||||||||||||||||||||    
T  20691293 gacaccggacacaacactgacacgtagaaactgataataatttgagaaaatgaca 20691347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 235
Target Start/End: Original strand, 24539136 - 24539170
Alignment:
Q  201 gtgttggctttgagagggtggatttagtcctacat 235  Q
    |||||||||||||| ||||||||||||||||||||    
T  24539136 gtgttggctttgagggggtggatttagtcctacat 24539170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 69
Target Start/End: Original strand, 25074788 - 25074817
Alignment:
Q  40 cgacaccgataataatttgagaaaatgaca 69  Q
    ||||||||||||||||||||||||||||||    
T  25074788 cgacaccgataataatttgagaaaatgaca 25074817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 52067069 - 52067122
Alignment:
Q  14 agacaccggacacaacacggattcgtcgacaccgataataatttgagaaaatga 67  Q
    |||||||||||||||||| ||  |||||| ||| |||||||||| |||||||||    
T  52067069 agacaccggacacaacactgacacgtcgataccaataataatttaagaaaatga 52067122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 121; Significance: 4e-62; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 109 - 245
Target Start/End: Complemental strand, 257480 - 257344
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  257480 tgttggaaattccgccttaattgcggtccgcccctagtcgcctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 257381  T
Q  209 tttgagagggtggatttagtcctacattggatagata 245  Q
    |||||| ||||||||||||||| |||| |||||||||    
T  257380 tttgagggggtggatttagtcccacatcggatagata 257344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 109 - 251
Target Start/End: Complemental strand, 43168106 - 43167964
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43168106 tgttggaaattccgccttaattgcggtccgcccctagtcgcctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 43168007  T
Q  209 tttgagagggtggatttagtcctacattggatagataccactc 251  Q
    |||||| ||||||||||||||| | || ||||||||| |||||    
T  43168006 tttgagggggtggatttagtcccaaatcggatagatagcactc 43167964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 108 - 243
Target Start/End: Original strand, 41670758 - 41670893
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    ||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  41670758 gtgttggaaattccgccttaattgcagtccgcccctagttgcctaaattgcgacctttggttagccttcattgcagcctccaacaccctcattgtgttgg 41670857  T
Q  208 ctttgagagggtggatttagtcctacattggataga 243  Q
    ||||||| ||||||||||||||| |||| |||||||    
T  41670858 ctttgagggggtggatttagtcccacatcggataga 41670893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 109 - 251
Target Start/End: Complemental strand, 1663817 - 1663676
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||||||||||||||||||||||||||||||||||||  ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1663817 tgttggaaattccgccttaattgcggtccgcccctagttgccttaattgcggcctttggttagccttcattgcagcctccaacaccttcattgtgttggc 1663718  T
Q  209 tttgagagggtggatttagtcctacattggatagataccactc 251  Q
    |||||| ||||||||||||||| |||| ||||||||| |||||    
T  1663717 tttgag-gggtggatttagtcccacatcggatagatagcactc 1663676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 108 - 245
Target Start/End: Complemental strand, 1661405 - 1661268
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    |||||||||||||||||||||| ||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1661405 gtgttggaaattccgccttaatcgcggttcgcccctagttgcctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgcgttgg 1661306  T
Q  208 ctttgagagggtggatttagtcctacattggatagata 245  Q
    ||||||  ||||||||||||||| |||| |||||||||    
T  1661305 ctttgacggggtggatttagtcccacatcggatagata 1661268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 108 - 245
Target Start/End: Complemental strand, 40121832 - 40121695
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||| |||||||||||||||||||| ||||||||||    
T  40121832 gtgttggaaattccgccttaattgcggtccgcccctagtcgcctaaattgctaccttcggttagccttaattgcagcctccaacacctttattgtgttgg 40121733  T
Q  208 ctttgagagggtggatttagtcctacattggatagata 245  Q
    ||||||| ||||||||||||| | |||| |||||||||    
T  40121732 ctttgagggggtggatttagttccacatcggatagata 40121695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 109 - 245
Target Start/End: Complemental strand, 7135456 - 7135320
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||   ||||||||||||||||    
T  7135456 tgttggaaattccgctttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcaacctccatttccttcattgtgttggc 7135357  T
Q  209 tttgagagggtggatttagtcctacattggatagata 245  Q
    |||||| ||||||||||||||  |||| |||||||||    
T  7135356 tttgagggggtggatttagtcacacatcggatagata 7135320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 109 - 245
Target Start/End: Original strand, 28909923 - 28910059
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    |||||||||||||||||| |||| ||||||||||||||| ||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||||    
T  28909923 tgttggaaattccgcctttattgtggtccgcccctagtcgcctaaattgcgccctttggtttgctttcattgcagcctccaacaccttcattgtgttggc 28910022  T
Q  209 tttgagagggtggatttagtcctacattggatagata 245  Q
    |||||| ||||||||||||||| ||||  ||||||||    
T  28910023 tttgagggggtggatttagtcccacataagatagata 28910059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 109 - 245
Target Start/End: Original strand, 41670475 - 41670610
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    |||| |||||||||||||||||  ||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  41670475 tgtttgaaattccgccttaattttggtccgcccctagtcgcctaatttgcgacctttggttagccttcattgcatcctccaacaccttcgttgtgttggc 41670574  T
Q  209 tttgagagggtggatttagtcctacattggatagata 245  Q
    |||||| ||| ||||||||||| |||| | |||||||    
T  41670575 tttgag-gggcggatttagtcccacatcgaatagata 41670610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 109 - 205
Target Start/End: Complemental strand, 40122139 - 40122043
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgtt 205  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  40122139 tgttggaaattccgccttaattgcggtccacccctagtcgcctaaattgcgaccttcggttagccttaattgcagcctccaacaccttcattgtgtt 40122043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 108 - 226
Target Start/End: Original strand, 30296519 - 30296637
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    |||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||| ||||||| ||||  |||||||||||||||||||||    
T  30296519 gtgttggaaattccgccttaattgtgatccgcccctagtcgcctaaattgcgacctttggttagtcttcattacagcaaccaacaccttcattgtgttgg 30296618  T
Q  208 ctttgagagggtggattta 226  Q
    ||||||  || ||||||||    
T  30296619 ctttgaagggttggattta 30296637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 111 - 202
Target Start/End: Original strand, 29780352 - 29780443
Alignment:
Q  111 ttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgt 202  Q
    ||||||||||| |||| |||||||||||||||||||| ||||||||||| | ||| ||| ||||||||||||||||||||||||||||||||    
T  29780352 ttggaaattccacctttattgcggtccgcccctagtcgcctaaattgcggcttttagtttgccttcattgcagcctccaacaccttcattgt 29780443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 109 - 225
Target Start/End: Original strand, 3973052 - 3973167
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    |||||||||||||||||| |||||||||| ||||||| | ||||| |||| || ||||| | |||||||||||||||| |||||||||||| |||||||     
T  3973052 tgttggaaattccgccttcattgcggtccacccctagccgcctaa-ttgcaacatttgggttgccttcattgcagccttcaacaccttcatcgtgttggg 3973150  T
Q  209 tttgagagggtggattt 225  Q
    |||||| ||||||||||    
T  3973151 tttgagggggtggattt 3973167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 41709910 - 41710030
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    |||||||||||||||||| |||| |||  |||||||||| ||||| ||||  | ||| | | | |||||||||| |||||||||||||||||||||||||    
T  41709910 tgttggaaattccgcctttattgtggtttgcccctagtcgcctaa-ttgcagcatttaggttgtcttcattgcaacctccaacaccttcattgtgttggc 41710008  T
Q  209 tttgagagggtggatttagtcc 230  Q
    |||||| |||||||||||||||    
T  41710009 tttgagggggtggatttagtcc 41710030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 29780091 - 29780158
Alignment:
Q  162 ctttggttagccttcattgcagcctccaacaccttcattgtgttggctttgagagggtggatttagtc 229  Q
    ||||||||  ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  29780091 ctttggttttccttcattgcagcctccaacaccttcattgtgttgactttgagagagtggatttagtc 29780158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 23721035 - 23721155
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||||||||||| |||| | |||||||| ||||||| ||||||| ||||| | ||||| | |||||||||||||||||||||| | ||||||||||||     
T  23721035 tgttggaaattccacctttaatgcggtcctcccctagccacctaa-ttgcggcatttgggttgccttcattgcagcctccaacaacatcattgtgttgga 23721133  T
Q  209 tttgagagggtggatttagtcc 230  Q
     ||||  |||||| ||||||||    
T  23721134 cttgaaggggtgggtttagtcc 23721155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 112 - 250
Target Start/End: Original strand, 8584999 - 8585123
Alignment:
Q  112 tggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggcttt 211  Q
    |||||||||| |||||||||||||||||||||||||| ||     || ||||||||||||| || ||||||||||         ||||||||||||||||    
T  8584999 tggaaattccaccttaattgcggtccgcccctagtcatct-----gcaacctttggttagctttaattgcagcct---------tcattgtgttggcttt 8585084  T
Q  212 gagagggtggatttagtcctacattggatagataccact 250  Q
    ||  ||||||||||||||| |||| ||||||||| ||||    
T  8585085 gaaggggtggatttagtcccacatcggatagatagcact 8585123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 112 - 237
Target Start/End: Original strand, 28358978 - 28359103
Alignment:
Q  112 tggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggcttt 211  Q
    |||||||||||| || |||| |||||||||||||||| |||| ||||| | ||||| |  ||||||||||||||||||||||||||||| | |||| | |    
T  28358978 tggaaattccgcattcattgtggtccgcccctagtcatctaa-ttgcggcatttgggtttccttcattgcagcctccaacaccttcattattttgggtgt 28359076  T
Q  212 gaga-gggtggatttagtcctacattg 237  Q
    || | ||||||||| ||||| ||||||    
T  28359077 gaaatgggtggattcagtcccacattg 28359103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 171 - 230
Target Start/End: Original strand, 32000770 - 32000829
Alignment:
Q  171 gccttcattgcagcctccaacaccttcattgtgttggctttgagagggtggatttagtcc 230  Q
    |||||||||||||||| |||||||||||| |||||||||||||| || ||||||||||||    
T  32000770 gccttcattgcagccttcaacaccttcatggtgttggctttgaggggatggatttagtcc 32000829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 227
Target Start/End: Complemental strand, 39079842 - 39079724
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    |||||| ||||| |||||| ||||||||| |||||||| || |||| ||||| | ||||  | | ||||||  |||||||||||||||||||||||||||    
T  39079842 gtgttgaaaatttcgccttcattgcggtctgcccctagccatctaa-ttgcggcatttgagttgtcttcatcacagcctccaacaccttcattgtgttgg 39079744  T
Q  208 ctttgagagggtggatttag 227  Q
     | |||  ||||||||||||    
T  39079743 gtgtgaaggggtggatttag 39079724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 229
Target Start/End: Complemental strand, 10406737 - 10406679
Alignment:
Q  171 gccttcattgcagcctccaacaccttcattgtgttggctttgagagggtggatttagtc 229  Q
    ||||||||||||||||||||||| |||| |||||||||||||||  ||||| |||||||    
T  10406737 gccttcattgcagcctccaacactttcactgtgttggctttgaggcggtgggtttagtc 10406679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 237
Target Start/End: Original strand, 41389198 - 41389325
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    |||||||||||| | |||| ||||||||| |||| ||| |  |||| ||||| |||||| || | |||||||||||||  |||||||||||||||||| |    
T  41389198 gtgttggaaatttcaccttcattgcggtctgcccgtagccgactaa-ttgcggcctttgatt-gtcttcattgcagccatcaacaccttcattgtgttag 41389295  T
Q  208 ctttgagagggtggatttagtcctacattg 237  Q
     | |||  ||||||||||||||| ||||||    
T  41389296 gtgtgaaggggtggatttagtcccacattg 41389325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 237
Target Start/End: Complemental strand, 12840764 - 12840657
Alignment:
Q  129 ttgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggctttgagagggtggatttagt 228  Q
    ||||||||||||||||| | ||||| ||||| | ||||| | |  |||||||||  ||||||||||||| ||||||||| ||||| ||||||| ||||||    
T  12840764 ttgcggtccgcccctagcctcctaa-ttgcggcatttgggttgttttcattgcattctccaacaccttcgttgtgttgggtttgaaagggtggctttagt 12840666  T
Q  229 cctacattg 237  Q
     | ||||||    
T  12840665 tccacattg 12840657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 207
Target Start/End: Complemental strand, 14092052 - 14092016
Alignment:
Q  171 gccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    |||||||||||||||||||||||||||||||||||||    
T  14092052 gccttcattgcagcctccaacaccttcattgtgttgg 14092016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 207
Target Start/End: Complemental strand, 14402070 - 14402034
Alignment:
Q  171 gccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    |||||||||||||||||||||||||||||||||||||    
T  14402070 gccttcattgcagcctccaacaccttcattgtgttgg 14402034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 153
Target Start/End: Complemental strand, 21034022 - 21033978
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaa 153  Q
    |||||||||||||||||| |||||||||||||||||| |||||||    
T  21034022 tgttggaaattccgccttcattgcggtccgcccctagccacctaa 21033978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 207
Target Start/End: Complemental strand, 30610957 - 30610921
Alignment:
Q  171 gccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    |||||||||||||||||||||||||||||||||||||    
T  30610957 gccttcattgcagcctccaacaccttcattgtgttgg 30610921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 153 - 237
Target Start/End: Original strand, 41387465 - 41387549
Alignment:
Q  153 aattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggctttgagagggtggatttagtcctacattg 237  Q
    ||||| ||| ||||| | |||||||||||| |||||||||||||||||||||| | | |||  |||||| |||||||| ||||||    
T  41387465 aattgtgacatttgggttgccttcattgcaacctccaacaccttcattgtgttaggtatgaaggggtgggtttagtcccacattg 41387549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 230
Target Start/End: Complemental strand, 12305266 - 12305148
Alignment:
Q  111 ttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggctt 210  Q
    |||||||||||||||| ||||||||| |||| |||   ||||| ||||| | |||||   | |||  ||||||||| |||||||||||||||||||| ||    
T  12305266 ttggaaattccgcctttattgcggtctgcccttagctgcctaa-ttgcggcatttgggctgacttatttgcagccttcaacaccttcattgtgttgggtt 12305168  T
Q  211 tgagagggtggatttagtcc 230  Q
    | | ||| ||||||||||||    
T  12305167 taaaaggatggatttagtcc 12305148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 37272237 - 37272176
Alignment:
Q  104 aaaggtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttg 166  Q
    |||| |||||||||||||||||| |||||||||| ||||||||| ||| ||||||||| ||||    
T  37272237 aaagatgttggaaattccgcctttattgcggtccacccctagtcgcct-aattgcgacatttg 37272176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 149
Target Start/End: Complemental strand, 33582424 - 33582383
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcac 149  Q
    ||||||||||||| ||||||||||||||| ||||||||||||    
T  33582424 gtgttggaaattctgccttaattgcggtctgcccctagtcac 33582383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 207
Target Start/End: Complemental strand, 422869 - 422776
Alignment:
Q  112 tggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    ||||||||||||||| |||||||| ||||| |||   ||||| | ||| | ||||| | |||| ||||||||| ||||||||||||||||||||||    
T  422869 tggaaattccgccttcattgcggttcgccc-tagcagcctaa-tcgcggcatttgggttgcctccattgcagcttccaacaccttcattgtgttgg 422776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 245
Target Start/End: Original strand, 31149039 - 31149084
Alignment:
Q  199 ttgtgttggctttgagagggtggatttagtcctacattggatagata 245  Q
    |||||||||||||||| ||||||||||||||||||||  ||||||||    
T  31149039 ttgtgttggctttgag-gggtggatttagtcctacatcagatagata 31149084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 245
Target Start/End: Original strand, 31167331 - 31167376
Alignment:
Q  199 ttgtgttggctttgagagggtggatttagtcctacattggatagata 245  Q
    |||||||||||||||| ||||||||||||||||||||  ||||||||    
T  31167331 ttgtgttggctttgag-gggtggatttagtcctacatcagatagata 31167376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 43288176 - 43288225
Alignment:
Q  104 aaaggtgttggaaattccgccttaattgcggtccgcccctagtcacctaa 153  Q
    |||||||||||||||||| |||| |||||| || |||||||||| |||||    
T  43288176 aaaggtgttggaaattccacctttattgcgatctgcccctagtcgcctaa 43288225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 153
Target Start/End: Complemental strand, 21048906 - 21048862
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaa 153  Q
    ||||||||||| |||||| ||||||||| |||||||| |||||||    
T  21048906 tgttggaaatttcgccttcattgcggtctgcccctagccacctaa 21048862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 207
Target Start/End: Complemental strand, 30899190 - 30899095
Alignment:
Q  111 ttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    |||||||||  ||||| ||||| ||||||| |||| ||||||| | | | | ||||| | ||||||||||||||||  |||||||||| ||||||||    
T  30899190 ttggaaattttgcctttattgcagtccgcctctagccacctaa-tggtggcatttgggttgccttcattgcagcctttaacaccttcagtgtgttgg 30899095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 245
Target Start/End: Complemental strand, 37272166 - 37272122
Alignment:
Q  201 gtgttggctttgagagggtggatttagtcctacattggatagata 245  Q
    |||||||||||||| ||||||||||||||| |||| || ||||||    
T  37272166 gtgttggctttgagggggtggatttagtcccacatcggttagata 37272122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 69
Target Start/End: Complemental strand, 38134465 - 38134437
Alignment:
Q  41 gacaccgataataatttgagaaaatgaca 69  Q
    |||||||||||||||||||||||||||||    
T  38134465 gacaccgataataatttgagaaaatgaca 38134437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 120; Significance: 2e-61; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 100 - 251
Target Start/End: Complemental strand, 24055331 - 24055180
Alignment:
Q  100 attgaaaggtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcat 199  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  24055331 attgaaaagtgttggaaattctgccttaattgcggtccgcccctagtcgcctaaattgcgccctttggttagccttcattgcagcctccaacaccttcat 24055232  T
Q  200 tgtgttggctttgagagggtggatttagtcctacattggatagataccactc 251  Q
    ||||||||||||||| ||||||||||||||| |||| ||||||||| |||||    
T  24055231 tgtgttggctttgagggggtggatttagtcccacatcggatagatagcactc 24055180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 109 - 245
Target Start/End: Original strand, 1408902 - 1409038
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  1408902 tgttggaaattccgccttaattgcggtccgccccttgtcgcctaaattgcgacctttggttagctttcattgcagcctccaacaccttcattgtgttggc 1409001  T
Q  209 tttgagagggtggatttagtcctacattggatagata 245  Q
    |||||| ||||||||||||||| |||| |||||||||    
T  1409002 tttgagggggtggatttagtcccacatcggatagata 1409038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 109 - 251
Target Start/End: Complemental strand, 10418551 - 10418409
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    |||||||| |||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  10418551 tgttggaatttccgccttaattgcggtccgcccctagtcgccttaattgcgatctttggttagccttcattgcagcctccaacaccttcattgtgttggc 10418452  T
Q  209 tttgagagggtggatttagtcctacattggatagataccactc 251  Q
    |||||| ||||||||||||||| |||| ||||||||| |||||    
T  10418451 tttgagggggtggatttagtcccacatcggatagatagcactc 10418409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 109 - 251
Target Start/End: Complemental strand, 10733651 - 10733509
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    |||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  10733651 tgttggaaattccgccttaattgcagtccgtccctagtcgcctaaattgcgacctttggttagccttcgttgcagcctccaacatcttcattgtgttggc 10733552  T
Q  209 tttgagagggtggatttagtcctacattggatagataccactc 251  Q
    |||||| ||||||||||||||| |||||||| ||||| |||||    
T  10733551 tttgagggggtggatttagtcccacattggacagataacactc 10733509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 108 - 245
Target Start/End: Complemental strand, 21067271 - 21067134
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |    
T  21067271 gtgttggaaattccgccttaattgcggtccgcccctagtcgcataaattgtgacctttggttagccttcattgcagcctccaacaccttcattgtgtttg 21067172  T
Q  208 ctttgagagggtggatttagtcctacattggatagata 245  Q
    ||||||| ||||||||||||||| | || |||||||||    
T  21067171 ctttgagggggtggatttagtcccatatcggatagata 21067134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 109 - 245
Target Start/End: Complemental strand, 1745055 - 1744919
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||||||||||||||||||| |||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  1745055 tgttggaaattccgccttaatcgcggtccgcctccagtcgcctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgtttgc 1744956  T
Q  209 tttgagagggtggatttagtcctacattggatagata 245  Q
    |||||| ||||||| ||||||| ||||||||||||||    
T  1744955 tttgagggggtggagttagtcccacattggatagata 1744919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 109 - 251
Target Start/End: Original strand, 19054384 - 19054526
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||| ||||||||||||||||||| || |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19054384 tgttgaaaattccgccttaattgcgatcagcccctagtcgccttaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 19054483  T
Q  209 tttgagagggtggatttagtcctacattggatagataccactc 251  Q
    |||||| ||||||| ||||||| |||| ||||||||| |||||    
T  19054484 tttgagggggtggaattagtcccacatcggatagataacactc 19054526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 108 - 245
Target Start/End: Complemental strand, 21089062 - 21088925
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    ||||||||||||| |||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |    
T  21089062 gtgttggaaattctgccttaattgcggtccgcccctagtcgccttaattgtgacctttggttagccttcattgcagcctccaacaccttcattgtgtttg 21088963  T
Q  208 ctttgagagggtggatttagtcctacattggatagata 245  Q
    ||||||| ||||||||||||||| | || |||||||||    
T  21088962 ctttgagggggtggatttagtcccatatcggatagata 21088925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 111 - 251
Target Start/End: Complemental strand, 21043992 - 21043852
Alignment:
Q  111 ttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggctt 210  Q
    |||||||||| |||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21043992 ttggaaattctgccttaattgcggtccgcccctagtcgcataaattgtgacctttggttagccttcattgcagcctccaacaccttcattgtgtttgctt 21043893  T
Q  211 tgagagggtggatttagtcctacattggatagataccactc 251  Q
    |||| ||||||||||||||| | || ||||||||| |||||    
T  21043892 tgagggggtggatttagtcccatatcggatagatagcactc 21043852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 108 - 251
Target Start/End: Original strand, 8143908 - 8144050
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    ||||||||||||||||||||||||||||| |||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||  |||||||    
T  8143908 gtgttggaaattccgccttaattgcggtctgcccctagtcgccttaattgcggcctttggttagccttcattgcagcctccaacaccttcaacgtgttgg 8144007  T
Q  208 ctttgagagggtggatttagtcctacattggatagataccactc 251  Q
    ||||||| ||||||||||||||| |||| ||||||||| |||||    
T  8144008 ctttgag-gggtggatttagtcccacatcggatagatagcactc 8144050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 108 - 245
Target Start/End: Complemental strand, 19753818 - 19753681
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    ||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |    
T  19753818 gtgttggaaattccgccttaattgcggtctgcccctagttgcctaaattgcgacctttggttagcctttattgcagcctgcaacaccttcattgtgttag 19753719  T
Q  208 ctttgagagggtggatttagtcctacattggatagata 245  Q
    ||||||| ||||||||||||||| |||| | |||||||    
T  19753718 ctttgagggggtggatttagtcccacatggtatagata 19753681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 12134701 - 12134554
Alignment:
Q  104 aaaggtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtg 203  Q
    |||| |||||||||||||||||| |||  ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||    
T  12134701 aaagttgttggaaattccgcctttattctggtccgcccctagtcacctaaattgcggcctttggtttgccttcattgcagcctccaataccttcattgtg 12134602  T
Q  204 ttggctttgagagggtggatttagtcctacattggatagataccactc 251  Q
    ||||||||||  ||||||| ||||||| |||| ||||||||| |||||    
T  12134601 ttggctttgacggggtggacttagtcccacatcggatagatagcactc 12134554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 111 - 245
Target Start/End: Complemental strand, 22911385 - 22911251
Alignment:
Q  111 ttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggctt 210  Q
    ||||||||||| |||| ||| |||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||    
T  22911385 ttggaaattccacctttattacggtccgcccctagtcgcctaaattgcgacctttggtttgccttcattacagcctctaacaccttcattgtgttggctt 22911286  T
Q  211 tgagagggtggatttagtcctacattggatagata 245  Q
    |||| || ||||||| |||| ||||||||||||||    
T  22911285 tgaggggctggattttgtcccacattggatagata 22911251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 111 - 245
Target Start/End: Complemental strand, 22889779 - 22889645
Alignment:
Q  111 ttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggctt 210  Q
    ||||||||||| |||| ||| |||| ||||||||||| ||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||    
T  22889779 ttggaaattccacctttattacggttcgcccctagtcgcctaaattgcgacctttggtttgccttcattacagcctctaacaccttcattgtgttggctt 22889680  T
Q  211 tgagagggtggatttagtcctacattggatagata 245  Q
    |||| || ||||||| |||| ||||||||||||||    
T  22889679 tgaggggctggattttgtcccacattggatagata 22889645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 114 - 251
Target Start/End: Complemental strand, 28068626 - 28068490
Alignment:
Q  114 gaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggctttga 213  Q
    ||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||| |||||| || || |||||||||    
T  28068626 gaaattccgccttaaatgcggtccgcccctagtcgcctaaattgtgacctttggttagccttcattgcaacctccaaaaccttcgtt-tggtggctttga 28068528  T
Q  214 gagggtggatttagtcctacattggatagataccactc 251  Q
    | ||||||||||||||| |||| ||||||||| |||||    
T  28068527 gggggtggatttagtcccacatcggatagataacactc 28068490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 109 - 245
Target Start/End: Original strand, 30539126 - 30539262
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||  ||||||||| |||||||||| || |||||||||| ||||||||||||     
T  30539126 tgttggaaattccgcctttattgcggtccgcccctagtcgcctaaattgcagcctttggtttgccttcattgtagactccaacaccatcattgtgttggt 30539225  T
Q  209 tttgagagggtggatttagtcctacattggatagata 245  Q
    |||||| ||||| ||||||||| |||| |||||||||    
T  30539226 tttgagggggtgaatttagtcccacatcggatagata 30539262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 108 - 245
Target Start/End: Complemental strand, 22875057 - 22874920
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    |||||||||||| | |||| ||| ||| | |||||||||| ||||||||||||||||||||| ||||||||| ||||||| |||||||||||| ||||||    
T  22875057 gtgttggaaatttcacctttattacggcctgcccctagtcgcctaaattgcgacctttggtttgccttcattacagcctctaacaccttcattatgttgg 22874958  T
Q  208 ctttgagagggtggatttagtcctacattggatagata 245  Q
    ||||||| || ||||||| |||| |||| |||||||||    
T  22874957 ctttgaggggctggattttgtcccacatcggatagata 22874920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 17096910 - 17096791
Alignment:
Q  111 ttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttgg-ttagccttcattgcagcctccaacaccttcattgtgttggct 209  Q
    |||||| ||||||||| | ||||||||  |||||||| |||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  17096910 ttggaagttccgcctttactgcggtccatccctagtcgcctaaattgcaacctttgggttagctttcattgcagcctccaacaccttcattgtgttggct 17096811  T
Q  210 ttgagagggtggatttagtc 229  Q
    ||||| || | |||||||||    
T  17096810 ttgaggggatagatttagtc 17096791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 32215799 - 32215920
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    |||| ||||||||| ||| |||| |||||| | |||||| | ||||||| |  |||||||| |||||||||||||||||||||||||||||| ||||||     
T  32215799 tgttagaaattccgtctttattgtggtccgtctctagtcgcttaaattgaggtctttggtttgccttcattgcagcctccaacaccttcattatgttggt 32215898  T
Q  209 tttgagagggtggatttagtcc 230  Q
    ||||||||||||||||||||||    
T  32215899 tttgagagggtggatttagtcc 32215920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 109 - 245
Target Start/End: Complemental strand, 32084 - 31950
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||||||||||| |||| |||||| ||| ||||||||||||||| ||||| | |||   | ||||||||||||| |||||||||||||||| |||||||    
T  32084 tgttggaaattccacctttattgcg-tccacccctagtcacctaa-ttgcggcatttaagttgccttcattgcagtctccaacaccttcattttgttggc 31987  T
Q  209 tttgagagggtggatttagtcctacattggatagata 245  Q
    |||||| ||||||||||||||| |||| |||||||||    
T  31986 tttgagggggtggatttagtccaacatcggatagata 31950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 108 - 230
Target Start/End: Complemental strand, 1206077 - 1205956
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    ||||||||||||| ||||| |||||||||||||||||| | ||||| ||||| | ||||| | ||||||||||||||||||| ||||||||| ||||| |    
T  1206077 gtgttggaaattctgccttcattgcggtccgcccctagccgcctaa-ttgcggcatttgggttgccttcattgcagcctccagcaccttcatcgtgttag 1205979  T
Q  208 ctttgagagggtggatttagtcc 230  Q
     | |||  |||||||||||||||    
T  1205978 gtgtgaaggggtggatttagtcc 1205956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 229
Target Start/End: Original strand, 32216112 - 32216233
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    |||||||||  |||| ||| |||||||| || || |||||||||||||||   ||||||||  |||||||||||| |||||||||| ||||||||||| |    
T  32216112 gtgttggaagctccgtctttattgcggttcgtccttagtcacctaaattgtagcctttggtgtgccttcattgcaacctccaacactttcattgtgtttg 32216211  T
Q  208 ctttgagagggtggatttagtc 229  Q
    |||| || ||||||||||||||    
T  32216212 cttttagggggtggatttagtc 32216233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 9602199 - 9602079
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||||||||||| |||| ||||| ||| |||||||| | ||||| ||||  | ||||| | ||||||||| |||| ||||||||||||||||||||||     
T  9602199 tgttggaaattccaccttcattgcagtctgcccctagccgcctaa-ttgcagcatttggattgccttcattccagcttccaacaccttcattgtgttggg 9602101  T
Q  209 tttgagagggtggatttagtcc 230  Q
    | |||  |||||||||||||||    
T  9602100 tgtgaaggggtggatttagtcc 9602079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 230
Target Start/End: Complemental strand, 1205763 - 1205642
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    |||||||||||||| |||| ||||| |||| ||||||| | ||||| ||| | | ||||| |  ||||||||||||||| |||||| |||||||||||||    
T  1205763 gtgttggaaattccaccttcattgcagtccacccctagccgcctaa-ttgtggcatttgggtttccttcattgcagcctacaacactttcattgtgttgg 1205665  T
Q  208 ctttgagagggtggatttagtcc 230  Q
     | |||  ||||||||| |||||    
T  1205664 gtgtgaaggggtggattcagtcc 1205642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 130819 - 130761
Alignment:
Q  171 gccttcattgcagcctccaac-accttcattgtgttggctttgagagggtggatttagt 228  Q
    ||||||||||||||||||||| |||||||||||||||| | |||  |||||||||||||    
T  130819 gccttcattgcagcctccaacaaccttcattgtgttgggtgtgaaggggtggatttagt 130761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 229
Target Start/End: Complemental strand, 12308635 - 12308584
Alignment:
Q  178 ttgcagcctccaacaccttcattgtgttggctttgagagggtggatttagtc 229  Q
    ||||| |||||||||||||||||||||||  ||||| | |||||||||||||    
T  12308635 ttgcatcctccaacaccttcattgtgttgagtttgaaaaggtggatttagtc 12308584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 190
Target Start/End: Complemental strand, 5252703 - 5252641
Alignment:
Q  128 attgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaa 190  Q
    ||||| |||||||||||||| ||||||||||  |||||| |  ||||||||||||| ||||||    
T  5252703 attgcagtccgcccctagtcgcctaaattgcagcctttgatatgccttcattgcagtctccaa 5252641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 235
Target Start/End: Complemental strand, 9156250 - 9156188
Alignment:
Q  173 cttcattgcagcctccaacaccttcattgtgttggctttgagagggtggatttagtcctacat 235  Q
    |||||||||| ||||||||||||||| |||||| | |||||  ||||||||||| ||| ||||    
T  9156250 cttcattgcatcctccaacaccttcactgtgttaggtttgaaggggtggatttattcccacat 9156188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 67
Target Start/End: Complemental strand, 17422318 - 17422288
Alignment:
Q  37 cgtcgacaccgataataatttgagaaaatga 67  Q
    |||||||||||||||||||||||||||||||    
T  17422318 cgtcgacaccgataataatttgagaaaatga 17422288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 69
Target Start/End: Complemental strand, 10760904 - 10760872
Alignment:
Q  37 cgtcgacaccgataataatttgagaaaatgaca 69  Q
    ||||||||| |||||||||||||||||||||||    
T  10760904 cgtcgacactgataataatttgagaaaatgaca 10760872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 237
Target Start/End: Original strand, 16509712 - 16509796
Alignment:
Q  154 attgcgacctttggttagccttcattgcagcctccaacaccttca-ttgtgttggctttgagagggtggatttagtcctacattg 237  Q
    |||||||| ||||| | |||||||||||||| | |||| |||||| ||||| ||| | |||  ||||||||||||||| ||||||    
T  16509712 attgcgacatttgggttgccttcattgcagctttcaacgccttcatttgtgatggatgtgaacgggtggatttagtcccacattg 16509796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 19602266 - 19602214
Alignment:
Q  15 gacaccggacacaacacggattcgtcgacaccgataataatttgagaaaatga 67  Q
    ||||||||||||||||||||  |  | |||| |||||||||||||||||||||    
T  19602266 gacaccggacacaacacggacacaccaacactgataataatttgagaaaatga 19602214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 26809288 - 26809252
Alignment:
Q  199 ttgtgttggctttgagagggtggatttagtcctacat 235  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  26809288 ttgtgttggctttgagggggtggatttagtcccacat 26809252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 65
Target Start/End: Complemental strand, 31290581 - 31290549
Alignment:
Q  33 gattcgtcgacaccgataataatttgagaaaat 65  Q
    |||||||||||||||||| ||||||||||||||    
T  31290581 gattcgtcgacaccgatagtaatttgagaaaat 31290549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 34625732 - 34625760
Alignment:
Q  39 tcgacaccgataataatttgagaaaatga 67  Q
    |||||||||||||||||||||||||||||    
T  34625732 tcgacaccgataataatttgagaaaatga 34625760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 116; Significance: 4e-59; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 108 - 251
Target Start/End: Original strand, 31305601 - 31305744
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31305601 gtgttggaaattccgccttaattgcggtccacccctagtcgcctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 31305700  T
Q  208 ctttgagagggtggatttagtcctacattggatagataccactc 251  Q
    ||||||| ||||||||||||||| ||||  |||||||| |||||    
T  31305701 ctttgagggggtggatttagtcccacatccgatagatagcactc 31305744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 33879991 - 33879865
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    |||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  33879991 tgttggaaataccgcctttattgcggtccacccctagtcacctaaattgcgacctttggtttgccttcattgcagcctccaacaccttcattgtgttggc 33879892  T
Q  209 tttgagagggtggatttagtcctacat 235  Q
    |||||||||||||||||||||| ||||    
T  33879891 tttgagagggtggatttagtcccacat 33879865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 33964264 - 33964390
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    |||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  33964264 tgttggaaataccgcctttattgcggtccacccctagtcacctaaattgcgacctttggtttgccttcattgcagcctccaacaccttcattgtgttggc 33964363  T
Q  209 tttgagagggtggatttagtcctacat 235  Q
    |||||||||||||||||||||| ||||    
T  33964364 tttgagagggtggatttagtcccacat 33964390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 109 - 245
Target Start/End: Original strand, 20735413 - 20735549
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20735413 tgttgaaaattccgccttaattgcggtctgcccctagtcgcctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 20735512  T
Q  209 tttgagagggtggatttagtcctacattggatagata 245  Q
    |||||| ||||||||||| ||| ||||  ||||||||    
T  20735513 tttgagggggtggatttaatcccacatcagatagata 20735549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 116 - 251
Target Start/End: Complemental strand, 8520299 - 8520164
Alignment:
Q  116 aattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggctttgaga 215  Q
    ||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  8520299 aattctgccttaattgcggtttgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaaccccttcattgtgttggctttgagg 8520200  T
Q  216 gggtggatttagtcctacattggatagataccactc 251  Q
    ||||||||||||||| |||| ||||||||| |||||    
T  8520199 gggtggatttagtcccacatcggatagatagcactc 8520164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 109 - 251
Target Start/End: Original strand, 17419678 - 17419820
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||||||||||||||||||||| |||| |||||||||| ||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  17419678 tgttggaaattccgccttaattgtggtctgcccctagtcgccttaattgcgacctttggttagccttaattgcagcctcaaacaccttcattgtgttggc 17419777  T
Q  209 tttgagagggtggatttagtcctacattggatagataccactc 251  Q
    |||||| ||||||||||||||| |||| ||||||||| |||||    
T  17419778 tttgagggggtggatttagtcccacatcggatagatagcactc 17419820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 109 - 245
Target Start/End: Complemental strand, 35926434 - 35926299
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  35926434 tgttggaaattccgccttaattgcggtccgcccctagtcgcctaaattgcgacctttggttagccttcattgcaacctccaacaccttcattgtgttggc 35926335  T
Q  209 tttgagagggtggatttagtcctacattggatagata 245  Q
    |||||| || | |||||||||| ||||  ||||||||    
T  35926334 tttgag-ggtttgatttagtcccacatcagatagata 35926299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 109 - 214
Target Start/End: Complemental strand, 8520448 - 8520343
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8520448 tgttggaaattccgctttaattgcggtccgcccctagtcgcctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 8520349  T
Q  209 tttgag 214  Q
    ||||||    
T  8520348 tttgag 8520343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 108 - 245
Target Start/End: Complemental strand, 19937257 - 19937120
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    ||||||||||||| |||||||||| |||||||||||| || ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  19937257 gtgttggaaattctgccttaattgtggtccgcccctaatcgcctaaattgcgacctttggttagccttaattgcatcctccaacaccttcattgtgttgg 19937158  T
Q  208 ctttgagagggtggatttagtcctacattggatagata 245  Q
    ||||||  ||||||||||||||| |||| |||||||||    
T  19937157 ctttgatggggtggatttagtcccacatcggatagata 19937120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 108 - 230
Target Start/End: Original strand, 45264553 - 45264675
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    ||||||||||||| ||||| |||||||||||||||| ||| ||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||    
T  45264553 gtgttggaaattctgcctttattgcggtccgccccttgtcgcctaaattgcggcctttggtttgccttctttgcagcctccaacaccttcattgtgttgg 45264652  T
Q  208 ctttgagagggtggatttagtcc 230  Q
    ||||||| |||||||||||||||    
T  45264653 ctttgagggggtggatttagtcc 45264675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 109 - 245
Target Start/End: Complemental strand, 4022338 - 4022202
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||||||||| |||||| |||||||||||||||| ||| ||||||||||| ||||||||| |||||| | ||| |||||||||||||||||||||||||    
T  4022338 tgttggaaatttcgcctttattgcggtccgccccttgtcgcctaaattgcggcctttggtttgccttcgtcgcaacctccaacaccttcattgtgttggc 4022239  T
Q  209 tttgagagggtggatttagtcctacattggatagata 245  Q
    |||||| ||||||||||||||| |||| |||||||||    
T  4022238 tttgagggggtggatttagtcccacatcggatagata 4022202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 109 - 229
Target Start/End: Original strand, 15013416 - 15013536
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    |||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||    
T  15013416 tgttggaaattctgccttagttgcggtccgcccctagtcgcctaaattgcgacctttgattaaccttcattgcaacctccaacaccttcattgtgttggc 15013515  T
Q  209 tttgagagggtggatttagtc 229  Q
    |||||| ||||| ||||||||    
T  15013516 tttgagggggtgaatttagtc 15013536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 108 - 245
Target Start/End: Complemental strand, 2697545 - 2697408
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    ||||||||||||||||||| |||||||||| ||| ||||| ||||||||| | ||||||||| | |||||||||||||||||||||||||||||||  ||    
T  2697545 gtgttggaaattccgcctttattgcggtccacccttagtcgcctaaattgaggcctttggtttgtcttcattgcagcctccaacaccttcattgtgacgg 2697446  T
Q  208 ctttgagagggtggatttagtcctacattggatagata 245  Q
    ||||||| ||||||||||||||| |||| |||||||||    
T  2697445 ctttgagggggtggatttagtcccacatcggatagata 2697408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 109 - 236
Target Start/End: Original strand, 6868025 - 6868151
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    |||||||||||||||||| ||||||||| ||||||| || ||||| ||||  | ||||| | ||| ||| |||||||||||||||||||||| ||||||     
T  6868025 tgttggaaattccgccttcattgcggtctgcccctaatcgcctaa-ttgcagcatttgggttgccctcactgcagcctccaacaccttcattttgttggg 6868123  T
Q  209 tttgagagggtggatttagtcctacatt 236  Q
    |||||  ||||||||||||||| |||||    
T  6868124 tttgaaggggtggatttagtcccacatt 6868151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 43423238 - 43423312
Alignment:
Q  177 attgcagcctccaacaccttcattgtgttggctttgagagggtggatttagtcctacattggatagataccactc 251  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||| ||||||||| |||||    
T  43423238 attgcagcctccaacaccttcattgtgttggctttgagggggtggatttattcccacatcggatagataacactc 43423312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 251
Target Start/End: Original strand, 37600822 - 37600905
Alignment:
Q  169 tagccttcattgc-agcctccaacaccttcattgtgttggctttgagagggtggatttagtcctacattggatagataccactc 251  Q
    ||||||||||||| |||||||||||||||||||| | ||||||| || |||||||||||||||  ||||||||||||| |||||    
T  37600822 tagccttcattgccagcctccaacaccttcattgcgctggctttaagggggtggatttagtccctcattggatagataacactc 37600905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 41590440 - 41590346
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgt 204  Q
    |||||| |||||||||||| |||||||||||| ||||| | ||||| |||||   || |||| ||||||||||||||||||||||||||||||||||    
T  41590440 gtgttgaaaattccgccttcattgcggtccgcacctagccgcctaa-ttgcggaattgggtt-gccttcattgcagcctccaacaccttcattgtgt 41590346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 236
Target Start/End: Original strand, 51515606 - 51515733
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    |||||||| ||||||||| |||||||  | ||||||| | ||||| ||| | | ||||| | ||||||||||| |||||||||||||||||||||||||     
T  51515606 tgttggaatttccgccttcattgcggctctcccctagccgcctaa-ttgtggcatttggattgccttcattgctgcctccaacaccttcattgtgttggg 51515704  T
Q  209 tttgaga-gggtggatttagtcctacatt 236  Q
    | ||| | ||||||||||||||| |||||    
T  51515705 tgtgaaaggggtggatttagtccgacatt 51515733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 229
Target Start/End: Complemental strand, 34626981 - 34626867
Alignment:
Q  114 gaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacct-ttggttagccttcattgcagcctccaacaccttcattgtgttggctttg 212  Q
    ||||||| ||||| |||| ||||||||||||| ||||||| ||||  | | |||||| |||||||||||||||||||||||||||||| |||||| | ||    
T  34626981 gaaattctgccttcattgtggtccgcccctagccacctaa-ttgcagcatcttggtt-gccttcattgcagcctccaacaccttcattctgttgggtgtg 34626884  T
Q  213 agagggtggatttagtc 229  Q
    |  | ||||||||||||    
T  34626883 aaggagtggatttagtc 34626867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 207
Target Start/End: Original strand, 14623099 - 14623196
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    |||||||||||| ||||||| | | |||| ||||||| | ||||| | | | | ||||| | |||||||||||||||||||||||||||||||||||||    
T  14623099 tgttggaaattctgccttaaatacagtccacccctagccgcctaa-tggtggcgtttgggttgccttcattgcagcctccaacaccttcattgtgttgg 14623196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 237
Target Start/End: Original strand, 18998602 - 18998730
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    |||||||||||||| |||| | || ||||||||||||| |  | ||||||||   ||||| |   ||||||||||||| |||||||||||  ||||||||    
T  18998602 gtgttggaaattcctccttcactgtggtccgcccctagccgtc-aaattgcggaatttgggttttcttcattgcagccaccaacaccttcgatgtgttgg 18998700  T
Q  208 ctttgagagggtggatttagtcctacattg 237  Q
     | ||| |||||||||||||||| ||||||    
T  18998701 gtgtgaaagggtggatttagtcccacattg 18998730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 19459615 - 19459735
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    |||||||||||||||||||||||  ||| |||| |||   ||| | ||||| | ||||| | ||||  ||||||||||||||| |||||||||||||||     
T  19459615 tgttggaaattccgccttaattggtgtctgccc-tagctgccttacttgcggcatttgggttgcctaaattgcagcctccaactccttcattgtgttggg 19459713  T
Q  209 tttgagagggtggatttagtcc 230  Q
    | |||| |||||| ||||||||    
T  19459714 tgtgagggggtgggtttagtcc 19459735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 145
Target Start/End: Original strand, 37600787 - 37600824
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctag 145  Q
    ||||||||||||||||||||||||||||||||||||||    
T  37600787 gtgttggaaattccgccttaattgcggtccgcccctag 37600824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 208
Target Start/End: Original strand, 7465371 - 7465466
Alignment:
Q  111 ttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    |||||||||| ||||| |||||  |||||| |||||| ||||| ||||| || |||| | |||||||| ||| ||||||||||| |||||||||||||    
T  7465371 ttggaaattctgccttcattgcattccgcctctagtcgcctaa-ttgcggccattgggttgccttcatcgcaccctccaacacc-tcattgtgttggc 7465466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 205
Target Start/End: Complemental strand, 19810906 - 19810814
Alignment:
Q  112 tggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgtt 205  Q
    ||||||||| |||||||||| ||||| |||||||   ||||| ||||| | ||||| | | |||||||||| |||| |||||||||||||||||    
T  19810906 tggaaattctgccttaattgtggtccacccctagctgcctaa-ttgcggcatttgggttggcttcattgcaacctcgaacaccttcattgtgtt 19810814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 19811222 - 19811126
Alignment:
Q  110 gttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    ||||||||||| | ||| |||| |||| |||||||| | ||||| ||| | | ||||| | ||||||||||||||||||||| ||||| |||||||||    
T  19811222 gttggaaattcagtcttcattgtggtctgcccctagccgcctaa-ttgtggcatttgggttgccttcattgcagcctccaactccttcgttgtgttgg 19811126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 43423193 - 43423242
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgc 158  Q
    |||||||||||||||||| ||||  |||||||||||||| ||||||||||    
T  43423193 tgttggaaattccgcctttattgttgtccgcccctagtcgcctaaattgc 43423242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 237
Target Start/End: Complemental strand, 51188948 - 51188899
Alignment:
Q  188 caacaccttcattgtgttggctttgagagggtggatttagtcctacattg 237  Q
    |||||||||||||||||||| |||||  ||||||||||||||| ||||||    
T  51188948 caacaccttcattgtgttgggtttgaaggggtggatttagtcccacattg 51188899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 35892002 - 35892040
Alignment:
Q  199 ttgtgttggctttgagagggtggatttagtcctacattg 237  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  35892002 ttgtgttggctttgagggggtgaatttagtcctacattg 35892040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 207
Target Start/End: Complemental strand, 40566417 - 40566381
Alignment:
Q  171 gccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  40566417 gccttcattacagcttccaacaccttcattgtgttgg 40566381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 113; Significance: 3e-57; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 109 - 245
Target Start/End: Original strand, 43169133 - 43169269
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  43169133 tgttggaaattccgccttaattgcggtccgcccctagtcgcctaaattgcgaccttcggttagccttaattgcagcctccaacaccttcattgtgttggc 43169232  T
Q  209 tttgagagggtggatttagtcctacattggatagata 245  Q
    |||||| ||||||||||||||| |||| |||||||||    
T  43169233 tttgagggggtggatttagtcccacatcggatagata 43169269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 108 - 245
Target Start/End: Complemental strand, 21214099 - 21213962
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||    
T  21214099 gtgttggaaattccgccttaattgtggtccgcccctagtcgcctaaattgcgatctttggttagccttaattgccgcctccaacaccttcattgtgttgg 21214000  T
Q  208 ctttgagagggtggatttagtcctacattggatagata 245  Q
    ||||||| ||||||||||||||| ||||||||||||||    
T  21213999 ctttgagggggtggatttagtcccacattggatagata 21213962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 109 - 251
Target Start/End: Original strand, 7877735 - 7877877
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||||||||||||| |||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||    
T  7877735 tgttggaaattccgctttaattgcggtccgtccctagtcgcctaaattgcgaccttcggttagccttcattgcagtctccaacatcttcattgtgttggc 7877834  T
Q  209 tttgagagggtggatttagtcctacattggatagataccactc 251  Q
    |||||| |||||||||||||||||||| ||||||||| |||||    
T  7877835 tttgagggggtggatttagtcctacatcggatagatagcactc 7877877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 109 - 251
Target Start/End: Complemental strand, 21214414 - 21214272
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||| |||||||| |||||||||||||||||    
T  21214414 tgttggaaattccgccttaattgcggtccgcccctagtcgcctaaattgtgacctttggttagccttaattgccgcctccaaaaccttcattgtgttggc 21214315  T
Q  209 tttgagagggtggatttagtcctacattggatagataccactc 251  Q
    |||||| ||||||||||||||| ||||| |||||||| |||||    
T  21214314 tttgagggggtggatttagtcccacattagatagatagcactc 21214272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 108 - 245
Target Start/End: Original strand, 43195674 - 43195811
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  43195674 gtgttggaaattccgccttaattgcggtccgcccctagtcgcctaaattgcgaccttcggttagccttaattgcagcctccaacaccttcattgtgttgg 43195773  T
Q  208 ctttgagagggtggatttagtcctacattggatagata 245  Q
    ||||||| |||| |||||||||| ||||  ||||||||    
T  43195774 ctttgagggggtagatttagtcccacatcagatagata 43195811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 117 - 245
Target Start/End: Complemental strand, 18902069 - 18901941
Alignment:
Q  117 attccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggctttgagag 216  Q
    ||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  18902069 attccgccttaattgtggtccgcccctagtcgcctaaattgcgatctttggttagccttcattgcagcctccaacaccttcattgtgttggctttgaggg 18901970  T
Q  217 ggtggatttagtcctacattggatagata 245  Q
    |||||||||||||| |||| |||||||||    
T  18901969 ggtggatttagtcccacatcggatagata 18901941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 109 - 245
Target Start/End: Original strand, 17509000 - 17509136
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    |||||||||||||||||||||||| |||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17509000 tgttggaaattccgccttaattgcagtccgcccctcgtcgccttaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 17509099  T
Q  209 tttgagagggtggatttagtcctacattggatagata 245  Q
    |||||| |||||||||||| || ||||  ||||||||    
T  17509100 tttgagggggtggatttagccccacatcagatagata 17509136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 109 - 245
Target Start/End: Complemental strand, 3977216 - 3977080
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||  |||| |||||||||| ||||||||||| ||||||||||||||||||||    
T  3977216 tgttggaaattccgccttaattgcggtccgcccctagtcgcctaaattgcatccttcggttagccttaattgcagcctctaacaccttcattgtgttggc 3977117  T
Q  209 tttgagagggtggatttagtcctacattggatagata 245  Q
    | |||| ||||||||||||||| |||| |||||||||    
T  3977116 tctgagggggtggatttagtcccacatcggatagata 3977080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 109 - 245
Target Start/End: Complemental strand, 42768545 - 42768409
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||    
T  42768545 tgttggaaattccgccttaattgcggttcgcccctagtcgcctaaattgcgacctttggttagccttcattgcagccaacaataccttcattgtgttggc 42768446  T
Q  209 tttgagagggtggatttagtcctacattggatagata 245  Q
    ||||||  |||| ||||||||| |||| |||||||||    
T  42768445 tttgaggaggtgaatttagtcccacatcggatagata 42768409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 109 - 251
Target Start/End: Complemental strand, 30166292 - 30166150
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||| || ||||||| |||||||||||||| | |||||||    
T  30166292 tgttggaaattccgccttaattgtggtccgcccctagtcgccttaattgcgacctttggttagctttaattgcagtctccaacaccttcactatgttggc 30166193  T
Q  209 tttgagagggtggatttagtcctacattggatagataccactc 251  Q
    |||||| ||||||||||||||| |||| ||||||||| |||||    
T  30166192 tttgagggggtggatttagtcccacatcggatagatagcactc 30166150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 108 - 245
Target Start/End: Complemental strand, 3976369 - 3976232
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    |||||||||||| | ||||||||| ||||||||||||||| ||||||||||||||||  ||||||||| |||||||||||||||||||||||| ||||||    
T  3976369 gtgttggaaatttcaccttaattgtggtccgcccctagtcgcctaaattgcgaccttcagttagccttaattgcagcctccaacaccttcattatgttgg 3976270  T
Q  208 ctttgagagggtggatttagtcctacattggatagata 245  Q
    ||||||| ||||||||||||||| |||| |||||||||    
T  3976269 ctttgagggggtggatttagtcccacatcggatagata 3976232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 109 - 245
Target Start/End: Complemental strand, 5424969 - 5424833
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||||||||||| |||||||||| ||||  |||||||| ||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||| |    
T  5424969 tgttggaaattccaccttaattgctgtccttccctagtcgcctaaattgcggcctttggttttccttcattgcagcctccaacaccttcattgtgttgcc 5424870  T
Q  209 tttgagagggtggatttagtcctacattggatagata 245  Q
    ||||||||||||| |||||||| |||| |||||||||    
T  5424869 tttgagagggtgggtttagtcccacatcggatagata 5424833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 108 - 245
Target Start/End: Complemental strand, 3976684 - 3976548
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    |||||||||||||| ||||||| ||||||| |||||| || ||||||||||||||||   |||||||| |||||||||||||||||||||||||||||||    
T  3976684 gtgttggaaattccaccttaatcgcggtccacccctaatcgcctaaattgcgaccttca-ttagccttaattgcagcctccaacaccttcattgtgttgg 3976586  T
Q  208 ctttgagagggtggatttagtcctacattggatagata 245  Q
    ||||||| ||||||||||||||| |||| |||||||||    
T  3976585 ctttgagggggtggatttagtcccacatcggatagata 3976548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 109 - 245
Target Start/End: Original strand, 23054217 - 23054353
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||||||||||| |||||||||||||| ||||  ||||  ||||||||||||||||||||||| || |||||||||||||||||||||| |||||||||    
T  23054217 tgttggaaattccaccttaattgcggtctgcccggagtcgtctaaattgcgacctttggttagctttaattgcagcctccaacaccttcaatgtgttggc 23054316  T
Q  209 tttgagagggtggatttagtcctacattggatagata 245  Q
    |||||| ||||||||||||||| ||||  ||||||||    
T  23054317 tttgagggggtggatttagtcccacatcagatagata 23054353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 109 - 245
Target Start/End: Original strand, 25441587 - 25441723
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||||||||||| |||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||    
T  25441587 tgttggaaattccacctttattgcggtccgcccctagtcgcctaaattgcggcctttggttagccttcattgcagcctccaataccttgattgtgttggc 25441686  T
Q  209 tttgagagggtggatttagtcctacattggatagata 245  Q
    ||  || || |||||||||||| ||||  ||||||||    
T  25441687 ttcaaggggttggatttagtcccacatcagatagata 25441723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 111 - 245
Target Start/End: Original strand, 11968947 - 11969079
Alignment:
Q  111 ttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggctt 210  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||| |||||| ||||||||||| |||||||||||| ||||||||||||||||||      
T  11968947 ttggaaattccgccttaattgcagtccgcccctagtcgcctaaattgtgaccttgggttagccttcgttgcagcctccagcaccttcattgtgttggc-- 11969044  T
Q  211 tgagagggtggatttagtcctacattggatagata 245  Q
    |||| ||||||||||||||| || | |||||||||    
T  11969045 tgagggggtggatttagtcccacgtcggatagata 11969079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 109 - 245
Target Start/End: Complemental strand, 6183586 - 6183443
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagc-------ctccaacaccttcattg 201  Q
    ||||||||||||||||||||||| |||||| |||||||| |||||||||||||||| |||||||||| ||||||||       |||||||||||||||||    
T  6183586 tgttggaaattccgccttaattgtggtccgtccctagtcgcctaaattgcgaccttcggttagccttaattgcagcctctaggctccaacaccttcattg 6183487  T
Q  202 tgttggctttgagagggtggatttagtcctacattggatagata 245  Q
    ||||||||||||| ||||||||||| ||| |||| |||||||||    
T  6183486 tgttggctttgagggggtggatttaatcccacatcggatagata 6183443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 125 - 251
Target Start/End: Complemental strand, 15820298 - 15820172
Alignment:
Q  125 ttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggctttgagagggtggatt 224  Q
    ||||||||||||||||||  ||  ||| ||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  15820298 ttaattgcggtccgcccccggttgccttaattgcggcctttggtttgcctttattgcagcctccaacaccttcattgtgttggctttgagggggtggatt 15820199  T
Q  225 tagtcctacattggatagataccactc 251  Q
    |||||| |||| ||||||||| |||||    
T  15820198 tagtcccacatcggatagatagcactc 15820172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 109 - 228
Target Start/End: Complemental strand, 10849704 - 10849585
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    |||||||||||||||||| |||||||||||||||||||  ||| ||||||| | |||| || || |||||||||||| ||||||||||||||||||||||    
T  10849704 tgttggaaattccgcctttattgcggtccgcccctagttgccttaattgcggcttttgatttgctttcattgcagccgccaacaccttcattgtgttggc 10849605  T
Q  209 tttgagagggtggatttagt 228  Q
    |||| | | |||||||||||    
T  10849604 tttgtgggcgtggatttagt 10849585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 109 - 245
Target Start/End: Complemental strand, 43688635 - 43688498
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||||||||| || ||| |||||||||| || || ||| | ||||||||| ||||||||| | |||||||||||||||||||||||||||| |||||||    
T  43688635 tgttggaaatttcgactttattgcggtccacctctggtcgcttaaattgcggcctttggtttgtcttcattgcagcctccaacaccttcattatgttggc 43688536  T
Q  209 tttgagaggg-tggatttagtcctacattggatagata 245  Q
    |||||| ||| |||||||| ||  |||| |||||||||    
T  43688535 tttgagggggatggatttaatctcacatcggatagata 43688498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 3976901 - 3976827
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgca 182  Q
    |||||||||||||||| ||||||||| ||||||||||||| |||| ||||||||||| |||||||||| ||||||    
T  3976901 gtgttggaaattccgctttaattgcgatccgcccctagtcgcctacattgcgaccttcggttagccttaattgca 3976827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 109 - 231
Target Start/End: Original strand, 18183358 - 18183479
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    |||||||||||||||||| |||||| ||| ||| ||| | ||||| | ||| | ||||  | |||||||||||||||||||||||||||||||||||||     
T  18183358 tgttggaaattccgccttcattgcgatccacccttagccgcctaagt-gcggcatttgagttgccttcattgcagcctccaacaccttcattgtgttggg 18183456  T
Q  209 tttgagagggtggatttagtcct 231  Q
    | |||  || |||||||||||||    
T  18183457 tgtgatgggatggatttagtcct 18183479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 3004057 - 3003999
Alignment:
Q  172 ccttcattgcagcctccaacaccttcattgtgttggctttgagagggtggatttagtcc 230  Q
    ||||||| |||||||||||||||||||||||||||| | |||| || ||| ||||||||    
T  3004057 ccttcatcgcagcctccaacaccttcattgtgttgggtgtgaggggatgggtttagtcc 3003999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 11339846 - 11339788
Alignment:
Q  172 ccttcattgcagcctccaacaccttcattgtgttggctttgagagggtggatttagtcc 230  Q
    |||| ||||||||||||||||||||||||||||| | |  || ||||||||||||||||    
T  11339846 cctttattgcagcctccaacaccttcattgtgttaggtgcgaaagggtggatttagtcc 11339788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 203
Target Start/End: Original strand, 887738 - 887769
Alignment:
Q  172 ccttcattgcagcctccaacaccttcattgtg 203  Q
    ||||||||||||||||||||||||||||||||    
T  887738 ccttcattgcagcctccaacaccttcattgtg 887769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 69
Target Start/End: Complemental strand, 10535819 - 10535790
Alignment:
Q  40 cgacaccgataataatttgagaaaatgaca 69  Q
    ||||||||||||||||||||||||||||||    
T  10535819 cgacaccgataataatttgagaaaatgaca 10535790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 31026682 - 31026723
Alignment:
Q  28 acacggattcgtcgacaccgataataatttgagaaaatgaca 69  Q
    |||||||| |||||| |||||||||||||| |||||||||||    
T  31026682 acacggatacgtcgagaccgataataatttaagaaaatgaca 31026723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 207
Target Start/End: Original strand, 21373936 - 21373972
Alignment:
Q  171 gccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    |||||||||||||||||||||||| | ||||||||||    
T  21373936 gccttcattgcagcctccaacaccattattgtgttgg 21373972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 69
Target Start/End: Original strand, 40681982 - 40682010
Alignment:
Q  41 gacaccgataataatttgagaaaatgaca 69  Q
    |||||||||||||||||||||||||||||    
T  40681982 gacaccgataataatttgagaaaatgaca 40682010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 1e-56; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 106 - 245
Target Start/End: Original strand, 53740070 - 53740209
Alignment:
Q  106 aggtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgtt 205  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||    
T  53740070 aggtgttggaaattccgccttaattgcggtccgcccctagtcgcctaaattgtgaccttcggttagccttaattgcagcctccaacaccttcattgtgtt 53740169  T
Q  206 ggctttgagagggtggatttagtcctacattggatagata 245  Q
    ||||||||| ||||||||||||||| |||| |||||||||    
T  53740170 ggctttgagggggtggatttagtcccacatcggatagata 53740209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 108 - 245
Target Start/End: Original strand, 15665042 - 15665180
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttgg-ttagccttcattgcagcctccaacaccttcattgtgttg 206  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  15665042 gtgttggaaattccgccttaattgcggtccgcccccagtcgcctaaattgcgacctttgggttagccttcattgcagcctccaacaccttcattgtgttg 15665141  T
Q  207 gctttgagagggtggatttagtcctacattggatagata 245  Q
    |||||||| ||||||||||||||| |||| |||||||||    
T  15665142 gctttgagggggtggatttagtcccacatcggatagata 15665180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 108 - 245
Target Start/End: Complemental strand, 32988484 - 32988347
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  32988484 gtgttggaaattccgccttaattgcggtccgccgctagtcacctaaattgcgacttttggttagccttcattgcagcccccaacaccttcattgtgttgg 32988385  T
Q  208 ctttgagagggtggatttagtcctacattggatagata 245  Q
    |||||||  |||||||||||||| |||| |||||||||    
T  32988384 ctttgaggtggtggatttagtcccacatcggatagata 32988347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 109 - 245
Target Start/End: Original strand, 29734452 - 29734588
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  29734452 tgttggaaattccgccttaattgtggtccgcccctagtcgcctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgac 29734551  T
Q  209 tttgagagggtggatttagtcctacattggatagata 245  Q
    |||||| ||||| ||||||||| |||| |||||||||    
T  29734552 tttgagggggtgaatttagtcccacatcggatagata 29734588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 109 - 245
Target Start/End: Original strand, 50857903 - 50858039
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  50857903 tgttggaaattccgccttaattgcggtccacccctagtcgcctaaattgcgaccttcggttagccttaattgcagcctccaacaccttcattgtgttggc 50858002  T
Q  209 tttgagagggtggatttagtcctacattggatagata 245  Q
    |||||| ||||||||||||||| |||| |||||||||    
T  50858003 tttgagggggtggatttagtcccacatcggatagata 50858039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 109 - 245
Target Start/End: Original strand, 52214506 - 52214642
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  52214506 tgttggaaattccgccttaattgcggtccgcccctagtcgcctaaattgagacctttggttagccttaattgcagcctccaacaccttcattgtgttggc 52214605  T
Q  209 tttgagagggtggatttagtcctacattggatagata 245  Q
    |||||| ||||||| ||||||| ||||||| ||||||    
T  52214606 tttgagggggtggaattagtcccacattgggtagata 52214642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 108 - 251
Target Start/End: Complemental strand, 29669576 - 29669434
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  29669576 gtgttggaaattccgccttaattgcggtccgcccctagtcgccttaattgctgcctttggttagccttcattgcagcctccaacaccttcattgtgttgg 29669477  T
Q  208 ctttgagagggtggatttagtcctacattggatagataccactc 251  Q
    ||||||| ||||||||||||||| |||| ||||||||| |||||    
T  29669476 ctttgag-gggtggatttagtcccacatcggatagatagcactc 29669434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 45427465 - 45427339
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  45427465 tgttggaaattccgccttaactgcggtccgcccctagtcgcctaaattgcgaccttgggttagccttcattgcagcctccaacaccttcattgtgttggc 45427366  T
Q  209 tttgagagggtggatttagtcctacat 235  Q
    |||||| ||||||||||||||| ||||    
T  45427365 tttgagggggtggatttagtcccacat 45427339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 108 - 245
Target Start/End: Complemental strand, 45427150 - 45427013
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  45427150 gtgttggaaattccgccttaattgctgtccgcccctagtcgcctaaattgcgaccttgggttagctttcattgcagcctccaacaccttcattgtgttgg 45427051  T
Q  208 ctttgagagggtggatttagtcctacattggatagata 245  Q
    ||||||| |||||||||||| || |||| |||||||||    
T  45427050 ctttgagggggtggatttagccccacatcggatagata 45427013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 108 - 245
Target Start/End: Original strand, 50858218 - 50858355
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  50858218 gtgttggaaattccgccttaattgcggtccacccctagtcgcctaaattgcgaccttcggttagccttaattgcagcctccaacaccttcattgtgttgg 50858317  T
Q  208 ctttgagagggtggatttagtcctacattggatagata 245  Q
    ||||||| ||||||||||||||| ||||  ||||||||    
T  50858318 ctttgagggggtggatttagtcccacatcagatagata 50858355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 108 - 251
Target Start/End: Original strand, 990929 - 991070
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  990929 gtgttggaaattc-gccttaattgcggtccgcccctagtcgcctaaattgcgacctttggttagccttaattgcagcctccaacaccttcattgtgttgg 991027  T
Q  208 ctttgagagggtggatttagtcctacattggatagataccactc 251  Q
    ||||||| ||||||||||||||| || | ||||||||| |||||    
T  991028 ctttgagggggtggatttagtcc-acgtcggatagatagcactc 991070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 108 - 251
Target Start/End: Complemental strand, 29669891 - 29669749
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    |||||||||||||||||||||||||||||| ||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  29669891 gtgttggaaattccgccttaattgcggtccacccctagtcgccttaattgcggcctttggttagccttcattgcagcctccaacaccttcattgtgttgg 29669792  T
Q  208 ctttgagagggtggatttagtcctacattggatagataccactc 251  Q
    ||||||| ||||||||||||||| ||||  |||||||| |||||    
T  29669791 ctttgag-gggtggatttagtcccacatcagatagatagcactc 29669749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 108 - 245
Target Start/End: Complemental strand, 53738422 - 53738285
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    ||||||| ||||||||||| |||||||||| ||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  53738422 gtgttggtaattccgcctttattgcggtccacccctagtcgcctaaattgcggcctttggtttgccttcattgcagcctccaacaccttcattgtgttgg 53738323  T
Q  208 ctttgagagggtggatttagtcctacattggatagata 245  Q
    ||||||| ||||||||||||||| |||| | |||||||    
T  53738322 ctttgagggggtggatttagtcccacatagaatagata 53738285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 109 - 245
Target Start/End: Complemental strand, 36558679 - 36558543
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    |||||||||||| ||||||||||| |||||||||||||||||| ||||||| ||||||||| |||||||| ||| ||||||||||||||| |||||||||    
T  36558679 tgttggaaattctgccttaattgcagtccgcccctagtcaccttaattgcggcctttggtttgccttcatagcaacctccaacaccttcactgtgttggc 36558580  T
Q  209 tttgagagggtggatttagtcctacattggatagata 245  Q
    |||||| ||||||||||||||| |||| |||||||||    
T  36558579 tttgagggggtggatttagtcccacatcggatagata 36558543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 108 - 245
Target Start/End: Original strand, 23018360 - 23018497
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    ||||||| ||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23018360 gtgttggtaattccgccttcattgcggtccgtccctagtcgcctaaattgcgacctttggttagccttcattgcaacctccaacaccttcattgtgttgg 23018459  T
Q  208 ctttgagagggtggatttagtcctacattggatagata 245  Q
    |||| || ||||| ||||| ||  |||| |||||||||    
T  23018460 ctttaagggggtgaatttaatctcacatcggatagata 23018497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 114 - 245
Target Start/End: Original strand, 56509504 - 56509636
Alignment:
Q  114 gaaattccgccttaattgcggtccgcccctagtca-cctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggctttg 212  Q
    |||||||| |||| ||||||||||||||||||||  ||||||| ||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  56509504 gaaattccacctttattgcggtccgcccctagtccgcctaaatcgcggcctttggtttgccttcattgcagcttccaacaccttcattgtgttggctttg 56509603  T
Q  213 agagggtggatttagtcctacattggatagata 245  Q
    || |||||||||||||||||||| |||||||||    
T  56509604 agggggtggatttagtcctacatcggatagata 56509636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 108 - 245
Target Start/End: Original strand, 43972245 - 43972382
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    |||||||||||||| |||| ||||||||| ||||| |||| ||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||    
T  43972245 gtgttggaaattccaccttcattgcggtctgcccccagtcgcctaaattgcggcctttgatttgccttcattgcagcctccaacaccttcattgtgttgg 43972344  T
Q  208 ctttgagagggtggatttagtcctacattggatagata 245  Q
     |||||| ||||| ||||||||| |||| |||||||||    
T  43972345 ttttgagggggtgaatttagtcccacatcggatagata 43972382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 108 - 198
Target Start/End: Original strand, 990731 - 990821
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttca 198  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  990731 gtgttggaaattccgccttaattgcggtccgcccctagtcgcctaaattgcgacctttggttagccttaattgcagcctccaacaccttca 990821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 112 - 245
Target Start/End: Original strand, 43971933 - 43972066
Alignment:
Q  112 tggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggcttt 211  Q
    |||||||||| |||| ||||||||| ||||||||   |||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  43971933 tggaaattccaccttcattgcggtctgcccctagctgcctaaattacgacctttggtttaccttcattgcagcctccaacaccttcattgtgttggcttt 43972032  T
Q  212 gagagggtggatttagtcctacattggatagata 245  Q
     || ||||||||||||||| || |||||||||||    
T  43972033 aagggggtggatttagtcccacgttggatagata 43972066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 109 - 245
Target Start/End: Original strand, 53739748 - 53739893
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttca---------t 199  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||         |    
T  53739748 tgttggaaattctgccttaattgcggtccgcccctagtcgcctaaattgcgaccttcggttagccttaattgcagcctccaacaccttcattgtgtaatt 53739847  T
Q  200 tgtgttggctttgagagggtggatttagtcctacattggatagata 245  Q
    ||||||||||||||| ||||||||||||||| | || |||||||||    
T  53739848 tgtgttggctttgagggggtggatttagtcccatatcggatagata 53739893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 153 - 251
Target Start/End: Original strand, 991139 - 991237
Alignment:
Q  153 aattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggctttgagagggtggatttagtcctacattggatagataccactc 251  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||| |||||    
T  991139 aattgcgacctttggttagccttaattgcagcctccaacaccttcattgtgttggctttgagggggtggatttagtcccacatcggatagataacactc 991237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 100 - 230
Target Start/End: Complemental strand, 48843239 - 48843109
Alignment:
Q  100 attgaaaggtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcat 199  Q
    |||||||  |||||||||||||||||| |||||||||| ||||||||| ||||||||||| |||||| ||  ||||||||||||||| ||||||||||||    
T  48843239 attgaaacatgttggaaattccgcctttattgcggtccacccctagtcgcctaaattgcggcctttgattttccttcattgcagccttcaacaccttcat 48843140  T
Q  200 tgtgttggctttgagagggtggatttagtcc 230  Q
    | |||||||| |||| |||||||||||||||    
T  48843139 tttgttggctctgagggggtggatttagtcc 48843109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 109 - 245
Target Start/End: Original strand, 51469377 - 51469508
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||| | || |||| ||||||||||||||||||||||||||||      ||||    
T  51469377 tgttggaaattccgcctttattgcggtccgcccctagtcgcctaaattgcgcctttgggtttgccttcattgcagcctccaacaccttca-----ctggc 51469471  T
Q  209 tttgagagggtggatttagtcctacattggatagata 245  Q
    |||||| ||||||||||||||| |||| |||||||||    
T  51469472 tttgagggggtggatttagtcccacatcggatagata 51469508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 109 - 245
Target Start/End: Original strand, 22866975 - 22867111
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    |||| ||||||||||||| |||| |||| |||||||||| ||| ||||||| ||||| ||| |||||||||||||| |||||||||||| ||||| ||||    
T  22866975 tgttagaaattccgcctttattgtggtctgcccctagtcgccttaattgcggcctttagtttgccttcattgcagcttccaacaccttcgttgtgctggc 22867074  T
Q  209 tttgagagggtggatttagtcctacattggatagata 245  Q
    |||||| ||||||||||||||| || | |||||||||    
T  22867075 tttgagggggtggatttagtcccacgtcggatagata 22867111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 153 - 251
Target Start/End: Original strand, 990482 - 990580
Alignment:
Q  153 aattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggctttgagagggtggatttagtcctacattggatagataccactc 251  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||| ||||||||| |||||    
T  990482 aattgccacctttggttagccttaattgcagcctccaacaccttcattgtgttggctttgagggggtgaatttagtcccacatcggatagataacactc 990580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 108 - 245
Target Start/End: Original strand, 49544225 - 49544359
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    ||||||||||||||| ||| |||| |||||  |||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  49544225 gtgttggaaattccgtctttattgtggtcc--ccctagtcgccttaattgcggcctttggttagccttcattgcagcctccaacaccttgattgtgttgg 49544322  T
Q  208 ctttgagagggtggatttagtcctacattggatagata 245  Q
    ||||||| || ||||||| || | |||| |||||||||    
T  49544323 ctttgag-ggatggattttgttccacatcggatagata 49544359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 200
Target Start/End: Original strand, 18862547 - 18862642
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcatt---gcagcctccaacaccttcatt 200  Q
    |||||||||||||||||||||| |||||||||| |||||| |||||||||| |||||| |||||| ||||||   |||||||||||||||||||||    
T  18862547 gtgttggaaattccgccttaatcgcggtccgcctctagtcgcctaaattgcaaccttttgttagctttcattgtagcagcctccaacaccttcatt 18862642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 109 - 175
Target Start/End: Complemental strand, 17222849 - 17222783
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagcctt 175  Q
    ||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  17222849 tgttggaaattccaccttaattgcggtccgcctctagtcgcctaaattgcgacctttggttagcctt 17222783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 245
Target Start/End: Original strand, 51470435 - 51470510
Alignment:
Q  171 gccttcattgcagcctccaacaccttcattgtgttggc-tttgagagggtggatttagtcctacattggatagata 245  Q
    |||||||||||||||||||||||||||| ||||||||| |||||| ||| ||||||||||| |||| |||||||||    
T  51470435 gccttcattgcagcctccaacaccttcactgtgttggcttttgagggggaggatttagtcccacatcggatagata 51470510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 13254358 - 13254410
Alignment:
Q  193 ccttcattgtgttggctttgagagggtggatttagtcctacattggatagata 245  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  13254358 ccttcattgtgttggctttgagggggtggatttagtcccacattggatagata 13254410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 230
Target Start/End: Complemental strand, 46332744 - 46332625
Alignment:
Q  111 ttggaaattccgccttaattgcggtccgccccta-gtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggct 209  Q
    ||||||||| |||||| ||||||||||||||||| | | ||||| ||||| | ||||| | |||||||||||||||| |||||| |||||||  |||| |    
T  46332744 ttggaaatttcgccttcattgcggtccgcccctaagccgcctaa-ttgcggcatttgggttgccttcattgcagccttcaacacgttcattggattgggt 46332646  T
Q  210 ttgagagggtggatttagtcc 230  Q
    || |  |||||||||||||||    
T  46332645 tttaaggggtggatttagtcc 46332625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 180
Target Start/End: Original strand, 13254295 - 13254366
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattg 180  Q
    |||||||||||||||||| ||||||||| |||||||||| |||||| |||  ||||| ||| ||||||||||    
T  13254295 tgttggaaattccgcctttattgcggtctgcccctagtcgcctaaactgcagccttttgtttgccttcattg 13254366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 171 - 230
Target Start/End: Complemental strand, 30491102 - 30491043
Alignment:
Q  171 gccttcattgcagcctccaacaccttcattgtgttggctttgagagggtggatttagtcc 230  Q
    |||||||||||||||||||||||||||| |||||||| | |||  |||||||||||||||    
T  30491102 gccttcattgcagcctccaacaccttcaatgtgttgggtgtgaaggggtggatttagtcc 30491043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 237
Target Start/End: Complemental strand, 23311628 - 23311555
Alignment:
Q  163 tttggttagccttcattgcagcctccaacaccttcattgtgttggctttgagagggtggatttagtcctacattg 237  Q
    ||||||| |||||| |||||||||||||||||||  | ||||||| |||||  ||||||||||||||||||||||    
T  23311628 tttggtttgccttctttgcagcctccaacacctttgt-gtgttgggtttgaaggggtggatttagtcctacattg 23311555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 107 - 237
Target Start/End: Complemental strand, 54595275 - 54595146
Alignment:
Q  107 ggtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttg 206  Q
    |||||||||||||||||||| ||||||| ||| ||||||   ||||| ||||| | |||   | |||||||||||| ||||||||||||||||||||  |    
T  54595275 ggtgttggaaattccgccttcattgcggaccgtccctagctgcctaa-ttgcggcatttaagttgccttcattgcaacctccaacaccttcattgtgcgg 54595177  T
Q  207 gctttgagagggtggatttagtcctacattg 237  Q
    | | |||  |||||||| |||||| ||||||    
T  54595176 ggtgtgaaggggtggatatagtcccacattg 54595146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 230
Target Start/End: Complemental strand, 26942775 - 26942679
Alignment:
Q  133 ggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggctttgagagggtggatttagtcc 230  Q
    ||||||||||||| ||||||| |||||   ||||| | | |||||||||| |||||||||| ||||||||||||| | |||  |||||||||||||||    
T  26942775 ggtccgcccctagccacctaa-ttgcggtatttgggttgtcttcattgcaacctccaacacattcattgtgttgggtgtgaaggggtggatttagtcc 26942679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 207
Target Start/End: Complemental strand, 44898873 - 44898837
Alignment:
Q  171 gccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    |||||||||||||||||||||||||||||||||||||    
T  44898873 gccttcattgcagcctccaacaccttcattgtgttgg 44898837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 229
Target Start/End: Complemental strand, 52043290 - 52043171
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||||||||||| |||| ||||| ||| |||||||  ||||||| |||||   ||||  | | |||||||||||||||||||||||||||||| | ||     
T  52043290 tgttggaaattccaccttcattgcagtctgcccctaaccacctaa-ttgcggaatttgtgttgtcttcattgcagcctccaacaccttcattgtatcggg 52043192  T
Q  209 tttgagagggtggatttagtc 229  Q
    | |||  ||||||||||||||    
T  52043191 tgtgaaggggtggatttagtc 52043171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 236
Target Start/End: Complemental strand, 3137784 - 3137720
Alignment:
Q  171 gccttcattgcagcctccaacaccttcattgtgttggctttgagagggtggatttagtcctacatt 236  Q
    |||||||||||||||| |||||||||||||||||||| | |||   |||||||||||||| |||||    
T  3137784 gccttcattgcagcctgcaacaccttcattgtgttgg-tgtgaattggtggatttagtccgacatt 3137720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 3137356 - 3137285
Alignment:
Q  128 attgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcatt 200  Q
    ||||| |||||||||||| | ||| | ||||||| ||| | | ||||||||||||||||||||||||||||||    
T  3137356 attgctgtccgcccctagcctcctga-ttgcgacatttaggttgccttcattgcagcctccaacaccttcatt 3137285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 56049851 - 56049899
Alignment:
Q  15 gacaccggacacaacacggattcgtcgacaccgataataatttgagaaa 63  Q
    |||||||||||| |||||||  | |||||||||||||||||||||||||    
T  56049851 gacaccggacacgacacggacacatcgacaccgataataatttgagaaa 56049899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 204 - 251
Target Start/End: Complemental strand, 17222784 - 17222737
Alignment:
Q  204 ttggctttgagagggtggatttagtcctacattggatagataccactc 251  Q
    ||||||||||| ||||||||||||||| |||| ||||||||| |||||    
T  17222784 ttggctttgagggggtggatttagtcccacataggatagatagcactc 17222737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 48046309 - 48046376
Alignment:
Q  171 gccttcattgcagcctccaacaccttcattgtgttggctttgaga-gggtggatttagtcctacattg 237  Q
    |||||||||||| ||||||||||||||| | |||||| | ||| | ||||||||||||||| ||||||    
T  48046309 gccttcattgcaacctccaacaccttcactatgttgggtgtgaaaggggtggatttagtcccacattg 48046376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 3137095 - 3137029
Alignment:
Q  171 gccttcattgcagcctccaacaccttcattgtgttggctttgagagggtggatttagtcctacattg 237  Q
    |||||||||| ||||||||||| | |||||||| ||| || ||  ||||||||||||||| ||||||    
T  3137095 gccttcattgtagcctccaacatcctcattgtgctgggttcgaatgggtggatttagtcccacattg 3137029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 245
Target Start/End: Complemental strand, 34206117 - 34206071
Alignment:
Q  199 ttgtgttggctttgagagggtggatttagtcctacattggatagata 245  Q
    |||||||||||||||| ||||||||||||||| |||| || ||||||    
T  34206117 ttgtgttggctttgagggggtggatttagtcccacatcggttagata 34206071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 42788090 - 42788140
Alignment:
Q  178 ttgcagcctccaacaccttcattgtgttggctttgagagggtggatttagt 228  Q
    |||||||||||||||||||||||| ||||| |||||  |||| ||||||||    
T  42788090 ttgcagcctccaacaccttcattgggttggatttgaaggggtagatttagt 42788140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 69
Target Start/End: Original strand, 7012065 - 7012094
Alignment:
Q  40 cgacaccgataataatttgagaaaatgaca 69  Q
    ||||||||||||||||||||||||||||||    
T  7012065 cgacaccgataataatttgagaaaatgaca 7012094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 230
Target Start/End: Complemental strand, 26942521 - 26942464
Alignment:
Q  173 cttcattgcagcctccaacaccttcattgtgttggctttgagagggtggatttagtcc 230  Q
    |||||||||| |||||||||| ||||||||||||| | |||  |||||||||| ||||    
T  26942521 cttcattgcaacctccaacacattcattgtgttgggtatgaaggggtggattttgtcc 26942464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 33385178 - 33385234
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttg 166  Q
    ||||||| |||||||||| ||||||||||  |||||||||||| ||||||||| ||||    
T  33385178 tgttggatattccgcctttattgcggtccatccctagtcacct-aattgcgacatttg 33385234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 69
Target Start/End: Complemental strand, 14465353 - 14465325
Alignment:
Q  41 gacaccgataataatttgagaaaatgaca 69  Q
    |||||||||||||||||||||||||||||    
T  14465353 gacaccgataataatttgagaaaatgaca 14465325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 69
Target Start/End: Complemental strand, 18513300 - 18513272
Alignment:
Q  41 gacaccgataataatttgagaaaatgaca 69  Q
    |||||||||||||||||||||||||||||    
T  18513300 gacaccgataataatttgagaaaatgaca 18513272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 144
Target Start/End: Original strand, 32784306 - 32784342
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgccccta 144  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  32784306 gtgttggaaattccgccttaactgcggtccaccccta 32784342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 111; Significance: 4e-56; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 109 - 251
Target Start/End: Original strand, 18905747 - 18905889
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  18905747 tgttggaaattccgccttaattgcggtccgcccctagtcgcctaatttgcgacctttggttagccttaattgcagcctccaacacctttattgtgttggc 18905846  T
Q  209 tttgagagggtggatttagtcctacattggatagataccactc 251  Q
    |||||| ||||||||||||||| |||| ||||||||| |||||    
T  18905847 tttgagggggtggatttagtcccacatcggatagatagcactc 18905889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 109 - 251
Target Start/End: Original strand, 36997057 - 36997199
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  36997057 tgttggaaattccgccttaattgcggtccgcccctagtcgcctaaattgtgacctttggttagccttaattgcagcctccaacaccttcattgtgttggc 36997156  T
Q  209 tttgagagggtggatttagtcctacattggatagataccactc 251  Q
    |||||| ||||||| ||||||| ||||||| ||||||| ||||    
T  36997157 tttgagggggtggaattagtcccacattgggtagatactactc 36997199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 109 - 243
Target Start/End: Original strand, 31766892 - 31767026
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  31766892 tgttggaaattccgccttcattgcggtccgcccctagtcacctaaattgcggcctttggtttgccttcattgcagcctccaaccccttcattgtgttggc 31766991  T
Q  209 tttgagagggtggatttagtcctacattggataga 243  Q
    |||||| ||||||||||||||| |||| |||||||    
T  31766992 tttgagggggtggatttagtcccacatcggataga 31767026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 109 - 251
Target Start/End: Complemental strand, 21085361 - 21085219
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||||||||||||||||||||||||||||||||  ||| | | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21085361 tgttggaaattccgccttaattgcggtccgccccctgtcgcgtcaattgcaacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 21085262  T
Q  209 tttgagagggtggatttagtcctacattggatagataccactc 251  Q
    |||||| ||||||||||||||| |||| ||||||||| |||||    
T  21085261 tttgagggggtggatttagtcccacatcggatagatagcactc 21085219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 109 - 245
Target Start/End: Complemental strand, 20298729 - 20298593
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||||||||||||||||||||||||||||||||  ||| | | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  20298729 tgttggaaattccgccttaattgcggtccgccccctgtcgcgtcaattgcaacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 20298630  T
Q  209 tttgagagggtggatttagtcctacattggatagata 245  Q
    |||||| ||||||||||||||| ||||| ||||||||    
T  20298629 tttgagggggtggatttagtcccacatttgatagata 20298593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 109 - 245
Target Start/End: Complemental strand, 23028041 - 23027905
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||| | |||||||||||||||| |||||||||||||||||||||    
T  23028041 tgttggaaattccgcctttattgcggtctgcccctagtcacctaaattgcggcctttggcttgccttcattgcagccttcaacaccttcattgtgttggc 23027942  T
Q  209 tttgagagggtggatttagtcctacattggatagata 245  Q
    |||||| ||||||||||||||| |||| |||||||||    
T  23027941 tttgagggggtggatttagtcccacataggatagata 23027905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 109 - 245
Target Start/End: Original strand, 32931297 - 32931428
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||     |||||    
T  32931297 tgttggaaattccgccttaattgcggtccgcccctagtcgcctaaattgcgacctttggttagccttcattgcagcctccaacaccttca-----ttggc 32931391  T
Q  209 tttgagagggtggatttagtcctacattggatagata 245  Q
    |||||| ||||||||||||||| |||| |||||||||    
T  32931392 tttgagggggtggatttagtcccacatcggatagata 32931428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 109 - 245
Target Start/End: Original strand, 21653217 - 21653354
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||  || |||||||||| ||||||||||||||||||||||||||||||||    
T  21653217 tgttggaaattccgccttaattgcggtccgcccctagtcgcctaaattgcgattttcggttagccttaattgcagcctccaacaccttcattgtgttggc 21653316  T
Q  209 tttga-gagggtggatttagtcctacattggatagata 245  Q
    ||||| | ||||||||||||||| |||| |||||||||    
T  21653317 tttgaggggggtggatttagtcccacatcggatagata 21653354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 109 - 223
Target Start/End: Complemental strand, 3184116 - 3184002
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||| |||||||||||| |||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3184116 tgttgtaaattccgcctttattgcggtccgcccctagtcgcctaaattgcggcctttggtttgccttcattgcagcctccaacaccttcattgtgttggc 3184017  T
Q  209 tttgagagggtggat 223  Q
    |||||| ||||||||    
T  3184016 tttgagggggtggat 3184002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 107 - 245
Target Start/End: Complemental strand, 23027720 - 23027582
Alignment:
Q  107 ggtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttg 206  Q
    |||||||||||||||||||| ||||| |||||||||||||| ||||||||||  | ||||| | ||||||||||||||||| ||||||||||||||||||    
T  23027720 ggtgttggaaattccgccttcattgcagtccgcccctagtcgcctaaattgcagcatttggcttgccttcattgcagcctcaaacaccttcattgtgttg 23027621  T
Q  207 gctttgagagggtggatttagtcctacattggatagata 245  Q
    |||||||| ||||||||||||||| ||||  ||||||||    
T  23027620 gctttgagggggtggatttagtcccacatcagatagata 23027582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 114 - 245
Target Start/End: Original strand, 21653700 - 21653831
Alignment:
Q  114 gaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggctttga 213  Q
    ||||||||||||||||||| |||| ||||||||| |||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  21653700 gaaattccgccttaattgcagtcc-cccctagtcgcctaaattgcgatcttcggttagccttaattgcagcctccaacaccttcattgtgttggctttga 21653798  T
Q  214 -gagggtggatttagtcctacattggatagata 245  Q
     | ||||||||||||||| |||| |||||||||    
T  21653799 ggggggtggatttagtcccacatcggatagata 21653831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 112 - 244
Target Start/End: Original strand, 40754338 - 40754471
Alignment:
Q  112 tggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggcttt 211  Q
    |||||| |||||||| |||||||||||||||||||| ||||||||| | |||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  40754338 tggaaaatccgcctttattgcggtccgcccctagtcgcctaaattggggccttaggtttgccttcattgcagcctccaacaccttcattgtgttggcttt 40754437  T
Q  212 ga-gagggtggatttagtcctacattggatagat 244  Q
    || | ||||||| ||||||| ||||  |||||||    
T  40754438 gaggggggtggacttagtcccacatcagatagat 40754471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 109 - 241
Target Start/End: Original strand, 22277415 - 22277547
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||| |||||||| ||| |||||||||||||||||||| ||||||||||  ||||| ||| ||||||||||||||||||||||| |||||| |||||||    
T  22277415 tgttgaaaattccgtctttattgcggtccgcccctagtcgcctaaattgcagcctttagtttgccttcattgcagcctccaacactttcattttgttggc 22277514  T
Q  209 tttgagagggtggatttagtcctacattggata 241  Q
    |||||| ||||| ||||||||| |||| |||||    
T  22277515 tttgagggggtgaatttagtcccacatcggata 22277547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 237
Target Start/End: Original strand, 38886992 - 38887120
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    |||||||||||||| |||| ||||| |||| ||||||| | ||||| ||||| | ||||| | |||||| ||||||||||||||||||||||||||||||    
T  38886992 gtgttggaaattcctccttcattgctgtccacccctagccgcctaa-ttgcggcatttgggttgccttcgttgcagcctccaacaccttcattgtgttgg 38887090  T
Q  208 ctttgagagggtggatttagtcctacattg 237  Q
     | |||  |||| |||||| ||| ||||||    
T  38887091 gtgtgaaggggttgatttaatcccacattg 38887120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 111 - 237
Target Start/End: Original strand, 26639004 - 26639130
Alignment:
Q  111 ttggaaattccgccttaattgcggtccg-cccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggct 209  Q
    ||||||| || ||||| ||||||||||  |||| |||||||||| ||||||| ||||| |  |||||||||||| | ||||||||||||||||||||  |    
T  26639004 ttggaaactcagcctttattgcggtccatccccaagtcacctaa-ttgcgacatttgggtttccttcattgcagtccccaacaccttcattgtgttgagt 26639102  T
Q  210 ttgagagggtggatttagtcctacattg 237  Q
     |||| ||||||||||||||| ||||||    
T  26639103 gtgagggggtggatttagtcccacattg 26639130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 171 - 245
Target Start/End: Original strand, 30590401 - 30590475
Alignment:
Q  171 gccttcattgcagcctccaacaccttcattgtgttggctttgagagggtggatttagtcctacattggatagata 245  Q
    ||||||||||||||||||||||||||||||||||| | | |||  ||||||||||||||| |||||| |||||||    
T  30590401 gccttcattgcagcctccaacaccttcattgtgtttggtgtgaaggggtggatttagtcccacattgcatagata 30590475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 109 - 229
Target Start/End: Complemental strand, 44933291 - 44933174
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    |||||||| ||  ||||| ||||||||||||| |||||  |   ||||||  ||||||| | |||||||||||| ||||||||||||||||||||||||     
T  44933291 tgttggaagttttgccttcattgcggtccgcctctagtggc---aattgcagcctttgggttgccttcattgcaccctccaacaccttcattgtgttggg 44933195  T
Q  209 tttgagagggtggatttagtc 229  Q
    |||||  ||||||||||||||    
T  44933194 tttgaaggggtggatttagtc 44933174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 111 - 207
Target Start/End: Original strand, 39590593 - 39590687
Alignment:
Q  111 ttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    |||||||||| ||||  |||||||||||||||||| | ||||| ||||| | ||||| | ||||||||||||| |||||||||||||||||||||||    
T  39590593 ttggaaattctgcctctattgcggtccgcccctagccgcctaa-ttgcggcatttgggt-gccttcattgcagtctccaacaccttcattgtgttgg 39590687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 229
Target Start/End: Original strand, 25971316 - 25971437
Alignment:
Q  108 gtgttggaaattccgccttaa-ttgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttg 206  Q
    |||||| |||||||||||| | ||||||||| ||||||| | ||||| ||| ||| ||| | |||||||||||||||| |||||||||||||||||| ||    
T  25971316 gtgttgaaaattccgccttcagttgcggtccacccctagccgcctaa-ttgtgacattttggtagccttcattgcagcatccaacaccttcattgtgctg 25971414  T
Q  207 gctttgagagggtggatttagtc 229  Q
    | | |||  ||||||||| ||||    
T  25971415 ggtgtgaaggggtggattcagtc 25971437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 28488544 - 28488424
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    |||||||||||| ||||| |||| ||||| ||||||  | ||||| ||| | | ||||  | ||||||||||||||||  |||||||||||||||||||     
T  28488544 tgttggaaattctgcctttattgtggtccacccctaaccgcctaa-ttgtggcatttgagttgccttcattgcagccttaaacaccttcattgtgttggg 28488446  T
Q  209 tttgagagggtggatttagtcc 230  Q
    |||||  |||||||||||||||    
T  28488445 tttgaaggggtggatttagtcc 28488424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 199 - 245
Target Start/End: Original strand, 34248340 - 34248386
Alignment:
Q  199 ttgtgttggctttgagagggtggatttagtcctacattggatagata 245  Q
    |||||||||||||||| ||||||||||||||| ||||||| ||||||    
T  34248340 ttgtgttggctttgagggggtggatttagtcccacattggttagata 34248386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 152
Target Start/End: Complemental strand, 27402603 - 27402559
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcaccta 152  Q
    ||||||||||||||||||| | |||| ||||||||||||||||||    
T  27402603 gtgttggaaattccgcctttagtgcgatccgcccctagtcaccta 27402559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 34248275 - 34248332
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttg 166  Q
    ||||||||||||||||||| |||||  ||||||||||||| ||| ||||||||| ||||    
T  34248275 gtgttggaaattccgcctttattgcaatccgcccctagtcgcct-aattgcgacatttg 34248332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 245
Target Start/End: Complemental strand, 36994055 - 36994009
Alignment:
Q  199 ttgtgttggctttgagagggtggatttagtcctacattggatagata 245  Q
    |||||||||||||||| ||||||||||||||| |||| || ||||||    
T  36994055 ttgtgttggctttgagggggtggatttagtcccacatcggttagata 36994009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 237
Target Start/End: Original strand, 26642541 - 26642606
Alignment:
Q  172 ccttcattgcagcctccaacaccttcattgtgttggctttgagagggtggatttagtcctacattg 237  Q
    |||||||||||| ||| ||||||||||||||||||  | |||  ||||||||||||| | ||||||    
T  26642541 ccttcattgcagtctcaaacaccttcattgtgttgagtgtgattgggtggatttagttccacattg 26642606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 207
Target Start/End: Complemental strand, 30005614 - 30005578
Alignment:
Q  171 gccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    ||||||||||||||||||||||| | |||||||||||    
T  30005614 gccttcattgcagcctccaacacttccattgtgttgg 30005578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 109; Significance: 6e-55; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 109 - 245
Target Start/End: Original strand, 13843588 - 13843724
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  13843588 tgttggaaattccgccttaattgcggtccgcccctagtcgcctaaattgcgaccttcggttagccttaattgcagcctccaacaccttcattgtgttggc 13843687  T
Q  209 tttgagagggtggatttagtcctacattggatagata 245  Q
    |||||| ||||||||||||||| ||||  ||||||||    
T  13843688 tttgagggggtggatttagtcccacatcagatagata 13843724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 108 - 235
Target Start/End: Original strand, 27760281 - 27760408
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    ||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27760281 gtgttggaaattccgccttaattgcggtctgcccctggtcgcctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 27760380  T
Q  208 ctttgagagggtggatttagtcctacat 235  Q
    ||||||| ||||||||||||||| ||||    
T  27760381 ctttgagggggtggatttagtcccacat 27760408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 108 - 251
Target Start/End: Complemental strand, 1028306 - 1028164
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    ||||||||||||||||||||||||| |||| ||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1028306 gtgttggaaattccgccttaattgcagtcc-cccctagtcgcctaaattgcaacctttggttagcctacattgcagcctccaacaccttcattgtgttgg 1028208  T
Q  208 ctttgagagggtggatttagtcctacattggatagataccactc 251  Q
    ||||||| ||||||||||||||| |||| ||||||||| |||||    
T  1028207 ctttgagggggtggatttagtcccacatcggatagatagcactc 1028164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 110 - 245
Target Start/End: Original strand, 27759967 - 27760102
Alignment:
Q  110 gttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggct 209  Q
    |||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  27759967 gttggaaattccgccttaattgcggtcctcccctagtagcctaaattgcgacctttggttaaccttcattgcagcctccaacactttcattgtgttggct 27760066  T
Q  210 ttgagagggtggatttagtcctacattggatagata 245  Q
    ||||| ||||||||||||||| |||| |||||||||    
T  27760067 ttgagggggtggatttagtcccacatcggatagata 27760102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 108 - 245
Target Start/End: Original strand, 13843903 - 13844040
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    |||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  13843903 gtgttggaaattccaccttaattgtggtccgcccctagtcgcctaaattgcgaccttcggttagccttaattgcagcctccaacaccttcattgtgttgg 13844002  T
Q  208 ctttgagagggtggatttagtcctacattggatagata 245  Q
    ||||||| ||||||||||||||| ||||  ||||||||    
T  13844003 ctttgagggggtggatttagtcccacatctgatagata 13844040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 115 - 251
Target Start/End: Original strand, 20811351 - 20811487
Alignment:
Q  115 aaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggctttgag 214  Q
    ||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  20811351 aaattccgccttaatagcggtccgcccctagtcgcctaaattccgacctttggttagccttaattgcagcctccaacaccttcattgtgttggctttgag 20811450  T
Q  215 agggtggatttagtcctacattggatagataccactc 251  Q
     ||||||||||||||| || | ||||||||| |||||    
T  20811451 ggggtggatttagtcccacttcggatagataacactc 20811487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 115 - 251
Target Start/End: Original strand, 20837706 - 20837842
Alignment:
Q  115 aaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggctttgag 214  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  20837706 aaattccgccttaatagcggtccgcccctagtcgcctaaattgcgacctttggttagccttaattgcagcatccaacaccttcattgtgttggctttgag 20837805  T
Q  215 agggtggatttagtcctacattggatagataccactc 251  Q
     ||||||||||||||| || | ||||||||| |||||    
T  20837806 ggggtggatttagtcccacttcggatagataacactc 20837842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 109 - 245
Target Start/End: Complemental strand, 28010329 - 28010193
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||| | |||||||||||||||| |||||||||||||||||||||    
T  28010329 tgttggaaattccgcctttattgcggtctgcccctagtcacctaaattgcggcctttggcttgccttcattgcagccttcaacaccttcattgtgttggc 28010230  T
Q  209 tttgagagggtggatttagtcctacattggatagata 245  Q
    |||||| ||||||||||||||| |||| |||||||||    
T  28010229 tttgagggggtggatttagtcccacataggatagata 28010193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 109 - 251
Target Start/End: Complemental strand, 37995847 - 37995705
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    |||||||||||||||||| ||||||||| |||||||||| ||||||||||| ||||||||| ||||||||| |||| |||||||||||||||||||||||    
T  37995847 tgttggaaattccgcctttattgcggtctgcccctagtcgcctaaattgcggcctttggtttgccttcattccagcttccaacaccttcattgtgttggc 37995748  T
Q  209 tttgagagggtggatttagtcctacattggatagataccactc 251  Q
    |||||| ||||||||||||||| |||| ||||||||| |||||    
T  37995747 tttgagggggtggatttagtcccacatcggatagatagcactc 37995705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 107 - 245
Target Start/End: Complemental strand, 17016306 - 17016170
Alignment:
Q  107 ggtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttg 206  Q
    ||||||||||||||||||||||||||||||||||| ||||  ||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||    
T  17016306 ggtgttggaaattccgccttaattgcggtccgccc-tagtg-cctaaattgcgacttttggttagccttcattatagcctccaacaccttcattgtgttg 17016209  T
Q  207 gctttgagagggtggatttagtcctacattggatagata 245  Q
    |||||||| ||||||||||||||| ||||  ||||||||    
T  17016208 gctttgagggggtggatttagtcccacatcagatagata 17016170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 109 - 245
Target Start/End: Complemental strand, 873908 - 873773
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    |||||||||| ||||||| |||||||||||||||| ||  ||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||    
T  873908 tgttggaaatcccgcctttattgcggtccgcccct-gtggcctaaattgcggcctttggtttgccttcattgcagcttccaacaccttcattgtgttggc 873810  T
Q  209 tttgagagggtggatttagtcctacattggatagata 245  Q
    |||||| ||||||||||||||| |||| |||||||||    
T  873809 tttgagggggtggatttagtcccacatcggatagata 873773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 109 - 251
Target Start/End: Complemental strand, 12595316 - 12595183
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||         ||||||||||||||||    
T  12595316 tgttggaaattccgccttaattgcggtccgcccctagtcgcctaaatttcgacttttggttagccttcattgcag---------ccttcattgtgttggc 12595226  T
Q  209 tttgagagggtggatttagtcctacattggatagataccactc 251  Q
    |||||| ||||||||||||||| |||| ||||||||| |||||    
T  12595225 tttgagggggtggatttagtcccacatcggatagataacactc 12595183  T

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Target: chr5; HSP #13
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 24918055 - 24918176
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    |||| ||||||||||||| ||||||||||||||||| || ||||||||| ||| ||||||| |||||||||||| | |||||||||||||||||||||||    
T  24918055 tgttcgaaattccgccttcattgcggtccgcccctaatcgcctaaattgtgacatttggtttgccttcattgcaacttccaacaccttcattgtgttggc 24918154  T
Q  209 tttgagagggtggatttagtcc 230  Q
    |||||| |||||||||||||||    
T  24918155 tttgagggggtggatttagtcc 24918176  T

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Target: chr5; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 109 - 245
Target Start/End: Original strand, 38131658 - 38131791
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    |||||||||||| ||||| ||||||||||||||||||||  |||||||| | ||||||||| |||||||||||||||||||||||   ||||||||||||    
T  38131658 tgttggaaattctgcctttattgcggtccgcccctagtcgtctaaattgtggcctttggttggccttcattgcagcctccaacac---cattgtgttggc 38131754  T
Q  209 tttgagagggtggatttagtcctacattggatagata 245  Q
    |||||| | ||||||||||||| |||| |||||||||    
T  38131755 tttgagggagtggatttagtcccacatcggatagata 38131791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 24993963 - 24994084
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    |||| |||||||| |||| ||||||||||||||||| || ||||||||||||| |||||||  ||||||||||| | |||||||||||||||||||||||    
T  24993963 tgttcgaaattccacctttattgcggtccgcccctaatcgcctaaattgcgacatttggtttaccttcattgcaacttccaacaccttcattgtgttggc 24994062  T
Q  209 tttgagagggtggatttagtcc 230  Q
    |||||| |||||||||||||||    
T  24994063 tttgagggggtggatttagtcc 24994084  T

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Target: chr5; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 108 - 245
Target Start/End: Complemental strand, 28010011 - 28009874
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    ||||||||||||||||||||||||| ||| |||||||||| |||||| |||  | ||||| | ||||||||||||||||| ||||||||| |||||||||    
T  28010011 gtgttggaaattccgccttaattgcagtctgcccctagtcgcctaaactgcagcatttggcttgccttcattgcagcctcaaacaccttctttgtgttgg 28009912  T
Q  208 ctttgagagggtggatttagtcctacattggatagata 245  Q
    ||||||| | ||||||||||||| ||||  ||||||||    
T  28009911 ctttgagggcgtggatttagtcccacatcagatagata 28009874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 112 - 229
Target Start/End: Original strand, 4796253 - 4796369
Alignment:
Q  112 tggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggcttt 211  Q
    ||||||||||||||| ||||||| |||||||||| | | ||| ||||  | ||||| | ||||||||||||||||||||||||||||||||||||| | |    
T  4796253 tggaaattccgccttcattgcggcccgcccctagccgcataa-ttgcagcatttgggttgccttcattgcagcctccaacaccttcattgtgttgggtgt 4796351  T
Q  212 gagagggtggatttagtc 229  Q
    ||  ||||||||||||||    
T  4796352 gaaggggtggatttagtc 4796369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 109 - 245
Target Start/End: Complemental strand, 17435451 - 17435315
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    |||||||||||| ||||| |||| ||||| ||  || || ||||||||| | | ||||||| | |||||||||| |||||||||||||||||||||||||    
T  17435451 tgttggaaattcagcctttattgtggtccaccattaatcgcctaaattgaggcatttggtttgtcttcattgcaacctccaacaccttcattgtgttggc 17435352  T
Q  209 tttgagagggtggatttagtcctacattggatagata 245  Q
     | ||| || || ||| |||||||||| |||||||||    
T  17435351 atcgaggggatgcattcagtcctacatcggatagata 17435315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 109 - 237
Target Start/End: Complemental strand, 31973646 - 31973519
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggc 208  Q
    ||||||||||||| ||||  | ||| ||||||||||| | ||||| ||| | | ||||  | ||||| |||||||||||||||||||||||||||||||     
T  31973646 tgttggaaattcctccttcctcgcgatccgcccctagccgcctaa-ttgaggcatttgagttgcctttattgcagcctccaacaccttcattgtgttggg 31973548  T
Q  209 tttgagagggtggatttagtcctacattg 237  Q
    | ||| |||||||||||||||| ||||||    
T  31973547 tgtgaaagggtggatttagtcccacattg 31973519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 115 - 237
Target Start/End: Original strand, 16275140 - 16275260
Alignment:
Q  115 aaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggctttgag 214  Q
    |||||||||||| |||||||||| ||||||| |||||  |||||| | ||||| | ||||||||||||||||||   |||||||||||||||| | | |     
T  16275140 aaattccgccttcattgcggtccacccctagccacct-gattgcggcatttgggttgccttcattgcagcctcc-gtaccttcattgtgttggatgtcaa 16275237  T
Q  215 agggtggatttagtcctacattg 237  Q
     ||||||||||||||| ||||||    
T  16275238 ggggtggatttagtcccacattg 16275260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 230
Target Start/End: Complemental strand, 31973338 - 31973217
Alignment:
Q  108 gtgttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttgg 207  Q
    ||||||||||||| ||||| ||||| ||||||||| || | ||||| ||||| | ||||| |  ||||||||| |  ||||||||||||| |||||||||    
T  31973338 gtgttggaaattctgccttcattgcagtccgcccccagccgcctaa-ttgcggcatttgggtttccttcattgaaatctccaacaccttcgttgtgttgg 31973240  T
Q  208 ctttgagagggtggatttagtcc 230  Q
     |||||  |||||||||||||||    
T  31973239 gtttgaaggggtggatttagtcc 31973217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 904904 - 904838
Alignment:
Q  171 gccttcattgcagcctccaacaccttcattgtgttggctttgagagggtggatttagtcctacattg 237  Q
    |||||||||||||||| |||  |||||||||||||| ||||||  ||||||||||||||| ||||||    
T  904904 gccttcattgcagccttcaagcccttcattgtgttgcctttgaaggggtggatttagtcccacattg 904838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 2039926 - 2039880
Alignment:
Q  23 acacaacacggattcgtcgacaccgataataatttgagaaaatgaca 69  Q
    ||||||||||||  ||||||||||| |||||||||||||||||||||    
T  2039926 acacaacacggacacgtcgacaccggtaataatttgagaaaatgaca 2039880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 109 - 143
Target Start/End: Complemental strand, 30588258 - 30588224
Alignment:
Q  109 tgttggaaattccgccttaattgcggtccgcccct 143  Q
    |||||||||||||||||||||||||||||||||||    
T  30588258 tgttggaaattccgccttaattgcggtccgcccct 30588224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 245
Target Start/End: Original strand, 29432395 - 29432439
Alignment:
Q  201 gtgttggctttgagagggtggatttagtcctacattggatagata 245  Q
    |||||||||||||| ||||||||||||||| ||||||| ||||||    
T  29432395 gtgttggctttgagggggtggatttagtcccacattggttagata 29432439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 69
Target Start/End: Original strand, 28296325 - 28296356
Alignment:
Q  38 gtcgacaccgataataatttgagaaaatgaca 69  Q
    ||||||||||||||||||||||||||||||||    
T  28296325 gtcgacaccgataataatttgagaaaatgaca 28296356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 69
Target Start/End: Complemental strand, 2577240 - 2577211
Alignment:
Q  40 cgacaccgataataatttgagaaaatgaca 69  Q
    ||||||||||||||||||||||||||||||    
T  2577240 cgacaccgataataatttgagaaaatgaca 2577211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 69
Target Start/End: Complemental strand, 11596518 - 11596486
Alignment:
Q  37 cgtcgacaccgataataatttgagaaaatgaca 69  Q
    |||||| ||||||||||||||||||||||||||    
T  11596518 cgtcgataccgataataatttgagaaaatgaca 11596486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 236
Target Start/End: Complemental strand, 15844374 - 15844310
Alignment:
Q  172 ccttcattgcagcctccaacaccttcattgtgttggctttgagagggtggatttagtcctacatt 236  Q
    ||||| ||||| ||| |||||||||||||||||||  | |||  ||||||||||||||| |||||    
T  15844374 ccttcgttgcaacctacaacaccttcattgtgttgagtgtgaaggggtggatttagtcccacatt 15844310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 30587931 - 30587871
Alignment:
Q  177 attgcagcctccaacaccttcattgtgttggctttgagagggtggatttagtcctacattg 237  Q
    |||||| ||| ||||||||||| ||||||||  || | |||||||||||||||| ||||||    
T  30587931 attgcaaccttcaacaccttcaatgtgttgggcttaaaagggtggatttagtcccacattg 30587871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 69
Target Start/End: Original strand, 39424637 - 39424669
Alignment:
Q  37 cgtcgacaccgataataatttgagaaaatgaca 69  Q
    |||||||||| ||||||||||||||||||||||    
T  39424637 cgtcgacaccaataataatttgagaaaatgaca 39424669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 111 - 245
Target Start/End: Complemental strand, 11238 - 11104
Alignment:
Q  111 ttggaaattccgccttaattgcggtccgcccctagtcacctaaattgcgacctttggttagccttcattgcagcctccaacaccttcattgtgttggctt 210  Q
    ||||||||||| |||| ||| |||| ||||||||||| ||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||    
T  11238 ttggaaattccacctttattacggtacgcccctagtcgcctaaattgcgacctttggtttgccttcattacagcctctaacaccttcattgtgttggctt 11139  T
Q  211 tgagagggtggatttagtcctacattggatagata 245  Q
    |||| || ||||||| |||| ||||||||||||||    
T  11138 tgaggggctggattttgtcccacattggatagata 11104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 128 - 214
Target Start/End: Original strand, 30602 - 30689
Alignment:
Q  128 attgcggtccgcccctagtcacctaaattgcgacctttggttagccttc-attgcagcctccaacaccttcattgtgttggctttgag 214  Q
    ||||||||||||||||| || ||||||||||||| |||||||  ||||| |||||| | |||||||||||||||||||||||||||||    
T  30602 attgcggtccgcccctaatcgcctaaattgcgacatttggtttaccttccattgcaacttccaacaccttcattgtgttggctttgag 30689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 72
Target Start/End: Complemental strand, 23883 - 23852
Alignment:
Q  41 gacaccgataataatttgagaaaatgacaatt 72  Q
    ||||||||||||||||||||||||||||||||    
T  23883 gacaccgataataatttgagaaaatgacaatt 23852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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