View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0755_low_162 (Length: 249)

Name: NF0755_low_162
Description: NF0755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0755_low_162
NF0755_low_162
[»] chr6 (8 HSPs)
chr6 (21-184)||(1646980-1647143)
chr6 (21-184)||(23998200-23998363)
chr6 (21-184)||(16380539-16380702)
chr6 (21-184)||(16648135-16648298)
chr6 (21-184)||(14130421-14130584)
chr6 (21-184)||(16099961-16100130)
chr6 (21-116)||(23025912-23026007)
chr6 (32-174)||(14643664-14643803)
[»] scaffold0225 (1 HSPs)
scaffold0225 (21-184)||(25513-25676)
[»] scaffold0162 (2 HSPs)
scaffold0162 (21-184)||(15027-15190)
scaffold0162 (21-184)||(11198-11361)
[»] chr8 (11 HSPs)
chr8 (21-184)||(16875559-16875722)
chr8 (21-184)||(21848801-21848964)
chr8 (21-184)||(22436457-22436620)
chr8 (21-179)||(20650819-20650977)
chr8 (21-184)||(23155506-23155667)
chr8 (38-179)||(23902323-23902464)
chr8 (21-184)||(21195004-21195166)
chr8 (21-127)||(16414302-16414408)
chr8 (43-165)||(19869866-19869988)
chr8 (35-152)||(24631144-24631261)
chr8 (77-151)||(23887215-23887289)
[»] chr7 (13 HSPs)
chr7 (21-184)||(7825977-7826140)
chr7 (21-184)||(27105804-27105967)
chr7 (21-184)||(27172358-27172521)
chr7 (21-184)||(17925727-17925890)
chr7 (21-177)||(13378969-13379123)
chr7 (21-184)||(4442005-4442168)
chr7 (21-184)||(13458112-13458275)
chr7 (34-176)||(15716946-15717088)
chr7 (69-174)||(17143354-17143459)
chr7 (23-165)||(39178-39320)
chr7 (117-174)||(12204904-12204961)
chr7 (117-174)||(14262349-14262406)
chr7 (77-169)||(48813338-48813430)
[»] chr5 (5 HSPs)
chr5 (21-184)||(23507686-23507849)
chr5 (21-184)||(24583212-24583375)
chr5 (21-184)||(21935391-21935554)
chr5 (33-174)||(20250499-20250640)
chr5 (119-151)||(21337595-21337627)
[»] chr3 (8 HSPs)
chr3 (21-184)||(8272659-8272822)
chr3 (21-184)||(15611820-15611983)
chr3 (21-184)||(30139523-30139686)
chr3 (21-184)||(30149074-30149237)
chr3 (21-184)||(13965612-13965775)
chr3 (21-177)||(15948730-15948886)
chr3 (21-184)||(6151113-6151276)
chr3 (21-184)||(25768035-25768198)
[»] chr1 (7 HSPs)
chr1 (21-184)||(20829485-20829648)
chr1 (21-184)||(20927157-20927320)
chr1 (21-184)||(20527156-20527319)
chr1 (21-179)||(41215949-41216107)
chr1 (42-172)||(21200993-21201123)
chr1 (29-135)||(22133857-22133963)
chr1 (21-90)||(35930918-35930987)
[»] scaffold0076 (1 HSPs)
scaffold0076 (21-184)||(42377-42540)
[»] chr2 (8 HSPs)
chr2 (21-184)||(24829749-24829912)
chr2 (21-184)||(22279824-22279987)
chr2 (21-177)||(25130335-25130491)
chr2 (21-184)||(24568229-24568392)
chr2 (21-184)||(22760130-22760293)
chr2 (55-174)||(10037927-10038046)
chr2 (55-174)||(10098312-10098431)
chr2 (117-174)||(23112465-23112522)
[»] scaffold0302 (2 HSPs)
scaffold0302 (21-184)||(7272-7435)
scaffold0302 (21-184)||(330-493)
[»] chr4 (5 HSPs)
chr4 (21-176)||(15291179-15291334)
chr4 (47-184)||(12340912-12341049)
chr4 (117-174)||(15323315-15323372)
chr4 (77-150)||(14696235-14696308)
chr4 (117-174)||(15072457-15072514)
[»] scaffold0266 (1 HSPs)
scaffold0266 (21-179)||(7885-8043)
[»] scaffold0077 (1 HSPs)
scaffold0077 (21-184)||(26290-26453)
[»] scaffold0124 (1 HSPs)
scaffold0124 (21-184)||(5830-5995)
[»] scaffold0218 (2 HSPs)
scaffold0218 (21-176)||(1976-2131)
scaffold0218 (25-184)||(26446-26605)
[»] scaffold1488 (1 HSPs)
scaffold1488 (21-176)||(827-982)
[»] scaffold0170 (1 HSPs)
scaffold0170 (21-184)||(34204-34367)
[»] scaffold0120 (1 HSPs)
scaffold0120 (21-184)||(24295-24458)
[»] scaffold0022 (1 HSPs)
scaffold0022 (21-184)||(8850-9013)
[»] scaffold0610 (1 HSPs)
scaffold0610 (21-179)||(6953-7111)
[»] scaffold0561 (1 HSPs)
scaffold0561 (21-184)||(7029-7192)
[»] scaffold0467 (1 HSPs)
scaffold0467 (21-184)||(1645-1808)
[»] scaffold0008 (2 HSPs)
scaffold0008 (21-184)||(132513-132676)
scaffold0008 (21-132)||(25938-26049)
[»] scaffold0369 (1 HSPs)
scaffold0369 (21-159)||(6888-7026)
[»] scaffold0692 (1 HSPs)
scaffold0692 (21-184)||(1908-2071)
[»] scaffold0387 (1 HSPs)
scaffold0387 (21-184)||(16177-16340)
[»] scaffold0876 (1 HSPs)
scaffold0876 (21-179)||(970-1128)
[»] scaffold0021 (3 HSPs)
scaffold0021 (21-184)||(21871-22034)
scaffold0021 (21-184)||(31447-31610)
scaffold0021 (79-184)||(7333-7438)
[»] scaffold0092 (1 HSPs)
scaffold0092 (32-172)||(238-378)
[»] scaffold0462 (1 HSPs)
scaffold0462 (21-125)||(2117-2221)
[»] scaffold0719 (1 HSPs)
scaffold0719 (40-105)||(4785-4850)
[»] scaffold0635 (1 HSPs)
scaffold0635 (55-174)||(9024-9143)
[»] scaffold0465 (1 HSPs)
scaffold0465 (21-79)||(13649-13707)
[»] scaffold0585 (1 HSPs)
scaffold0585 (117-174)||(5209-5266)
[»] scaffold0083 (1 HSPs)
scaffold0083 (77-151)||(9114-9188)
[»] scaffold0827 (1 HSPs)
scaffold0827 (77-150)||(5259-5332)
[»] scaffold0730 (1 HSPs)
scaffold0730 (117-174)||(121-178)
[»] scaffold0029 (1 HSPs)
scaffold0029 (117-174)||(114688-114745)
[»] scaffold0026 (1 HSPs)
scaffold0026 (117-174)||(50939-50996)
[»] scaffold0016 (1 HSPs)
scaffold0016 (117-174)||(176464-176521)
[»] scaffold0270 (2 HSPs)
scaffold0270 (119-151)||(6023-6055)
scaffold0270 (119-151)||(13153-13185)


Alignment Details
Target: chr6 (Bit Score: 152; Significance: 1e-80; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 1646980 - 1647143
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1646980 atcatcagattagagtgaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 1647079  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  1647080 tgcgccaggtgtctttatggaatatatgaatagaatatttcatccttatctggaccgttttgtg 1647143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 21 - 184
Target Start/End: Complemental strand, 23998363 - 23998200
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23998363 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 23998264  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23998263 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 23998200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 16380539 - 16380702
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16380539 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 16380638  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16380639 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 16380702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 16648135 - 16648298
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    |||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16648135 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 16648234  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16648235 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 16648298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 184
Target Start/End: Complemental strand, 14130584 - 14130421
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||| |||||||| |||| ||    
T  14130584 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggatactatgagtattatgtgatgtcatttggattatccaa 14130485  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    || || ||||||||| |||||||| |||||||||| ||||||||||||| ||||||||| ||||    
T  14130484 tgtgctaggtgtcttcatggaatatatgaatagaacatttcatccttatttggaccgttttgtg 14130421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 21 - 184
Target Start/End: Complemental strand, 16100130 - 16099961
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    |||||||||||| |||||||| ||||||||||||||||||  |||| |||||||||||||||||||||||||||| ||| |||||||||||||| |||||    
T  16100130 atcatcagattatagtgaaggcggaagatatatccaaaacatcgttacgaacgaggtatggacactatgagtattatgtaatgccatttggagtgtctaa 16100031  T
Q  121 tgcgccaggtgtct------ttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    || |||||||||||      ||||||| || |||||||||||||||||||| ||| ||||||||| ||||    
T  16100030 tgtgccaggtgtctttatctttatggagtatatgaatagaatatttcatccatatttggaccgttttgtg 16099961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 23025912 - 23026007
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtat 116  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23025912 atcatcagattagagtgaaggcggaagatatatccaaaactacgtctcgaacgaggtatggacactatgagtattctgtgatgccatttggagtat 23026007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 174
Target Start/End: Original strand, 14643664 - 14643803
Alignment:
Q  32 agagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtg 131  Q
    |||||||||  ||| ||||| ||||| ||||| |||||||| || ||||||||||  || |||||||||||||||||||| ||  || ||||||  ||||    
T  14643664 agagtgaagacggaggatatttccaagactgcattccgaactagatatggacact--ga-tattctgtgatgccatttggtgttactgatgcgcatggtg 14643760  T
Q  132 tctttatggaatacatgaatagaatatttcatccttatctgga 174  Q
    |||| |||||||| ||||||||||| || ||||||||| ||||    
T  14643761 tcttcatggaatatatgaatagaatcttccatccttatttgga 14643803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 148; Significance: 3e-78; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 21 - 184
Target Start/End: Complemental strand, 25676 - 25513
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25676 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 25577  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25576 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 25513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 148; Significance: 3e-78; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 21 - 184
Target Start/End: Complemental strand, 15190 - 15027
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15190 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 15091  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15090 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 15027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 11198 - 11361
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    ||||||||||||||||||||| |||||||||||||||||| || |||||||| |||||||||||||||||||||||| |||||||||||||||| |||||    
T  11198 atcatcagattagagtgaaggcggaagatatatccaaaaccgcattccgaacaaggtatggacactatgagtattctttgatgccatttggagtgtctaa 11297  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11298 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 11361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 148; Significance: 3e-78; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 16875559 - 16875722
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    |||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16875559 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 16875658  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16875659 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 16875722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 21848801 - 21848964
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    |||||||||||||||| |||| | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  21848801 atcatcagattagagtaaaggcgaaagatatatccaaaactgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaa 21848900  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21848901 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 21848964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 21 - 184
Target Start/End: Complemental strand, 22436620 - 22436457
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    ||||||| ||||||||||| | |||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||    
T  22436620 atcatcatattagagtgaaagcggaagatatatccaaaaccgcgttccgaacaaggtatggacagtatgagtattctgtgatgccatttggagtatccaa 22436521  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||    
T  22436520 tgcgccaggtgtcttaatggaataaatgaatagaatatttcatccttatctggaccgttttgtg 22436457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 21 - 179
Target Start/End: Original strand, 20650819 - 20650977
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    ||||||| |||||||| ||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20650819 atcatcaaattagagtaaaggcagaagatatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 20650918  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgtt 179  Q
    ||||||||||||||| || || || ||||||||||||||| ||||||||||||||||||    
T  20650919 tgcgccaggtgtcttcatagagtatatgaatagaatattttatccttatctggaccgtt 20650977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 23155506 - 23155667
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||| | | ||    
T  23155506 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacact--gagtattctgtgatgccatttggagcacccaa 23155603  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    ||||| ||||||||| |||||||| |||||||||||||||||||||||| ||||||||| ||||    
T  23155604 tgcgctaggtgtcttcatggaatatatgaatagaatatttcatccttatttggaccgttttgtg 23155667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 38 - 179
Target Start/End: Complemental strand, 23902464 - 23902323
Alignment:
Q  38 aaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtcttta 137  Q
    ||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||| |    
T  23902464 aaggtggaagatatatccaaaaccgcgttccaaacgaggcatggacactatgagtattctgtgatgccatttggagtatccaatgcactaggtgtcttca 23902365  T
Q  138 tggaatacatgaatagaatatttcatccttatctggaccgtt 179  Q
    ||||||| |||||||||||||||||||||| |||||||||||    
T  23902364 tggaatatatgaatagaatatttcatccttttctggaccgtt 23902323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 21195004 - 21195166
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    ||||||| | ||||||||||| |||||||||||||||||| | ||||||||| |||||||||||||||||||||| |||||||| ||||||||||| |||    
T  21195004 atcatcataatagagtgaaggcggaagatatatccaaaaccgtgttccgaacaaggtatggacactatgagtattttgtgatgcaatttggagtatataa 21195103  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    || |||||||  ||| |||||||| |||||||||||||||||||||||||||||||||| ||||    
T  21195104 tgtgccaggt-acttcatggaatatatgaatagaatatttcatccttatctggaccgttttgtg 21195166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 16414408 - 16414302
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    ||||||| | |||||  ||||| ||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||    
T  16414408 atcatcatactagaggaaaggtagaagatatatccaaaaccgcattccgaacaaggtatggacactatgagtattctgtgatgccatttggaatatccaa 16414309  T
Q  121 tgcgcca 127  Q
    |||||||    
T  16414308 tgcgcca 16414302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 165
Target Start/End: Complemental strand, 19869988 - 19869866
Alignment:
Q  43 ggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaa 142  Q
    |||||||||||| || ||||| ||| ||||  | ||||| || ||||||||||| |||||||| |||||||| || || |||||||| || ||||||||     
T  19869988 ggaagatatatcgaagactgccttcagaacccgttatggtcattatgagtattcagtgatgccttttggagtgtccaacgcgccaggagtgtttatggag 19869889  T
Q  143 tacatgaatagaatatttcatcc 165  Q
    || ||||| ||||| || |||||    
T  19869888 tatatgaacagaattttccatcc 19869866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 152
Target Start/End: Original strand, 24631144 - 24631261
Alignment:
Q  35 gtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtct 134  Q
    |||||| | ||||||||| | || | || |||| |||| |||||| | ||||||||||||||||| ||| ||||||| ||  |||||| || |||  | |    
T  24631144 gtgaagttagaagatataccaaagattgtgttctgaactaggtatagtcactatgagtattctgtaatgtcatttggtgtgactaatgtgctaggattat 24631243  T
Q  135 ttatggaatacatgaata 152  Q
    ||||||||||||||||||    
T  24631244 ttatggaatacatgaata 24631261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 23887289 - 23887215
Alignment:
Q  77 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaat 151  Q
    |||||||| || |||||||| |||||||| || || ||  |||||||||||| ||| |||||||| |||||||||    
T  23887289 tatggacattacgagtattcagtgatgcctttcggtgttactaatgcgccagatgtgtttatggagtacatgaat 23887215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 148; Significance: 3e-78; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 21 - 184
Target Start/End: Complemental strand, 7826140 - 7825977
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7826140 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 7826041  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7826040 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 7825977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 27105804 - 27105967
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27105804 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 27105903  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  27105904 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 27105967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 21 - 184
Target Start/End: Complemental strand, 27172521 - 27172358
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27172521 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 27172422  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  27172421 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 27172358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 21 - 184
Target Start/End: Complemental strand, 17925890 - 17925727
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    ||||||||||||||||||||  |||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  17925890 atcatcagattagagtgaagacggaagatatatccaaaaccgcgtttcgaatgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 17925791  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||| ||| ||||||| ||||    
T  17925790 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatccttttctagaccgttttgtg 17925727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 21 - 177
Target Start/End: Complemental strand, 13379123 - 13378969
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    |||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||    
T  13379123 atcatcagatcagagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacact--gagtattctgtgatgccatttggagtatccaa 13379026  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccg 177  Q
    ||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||    
T  13379025 tgcgccaggtgtcttcatgaaatatatgaatagaatatttcatccttatctggaccg 13378969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 184
Target Start/End: Complemental strand, 4442168 - 4442005
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    |||||||||||||||| |||| |||||||||||||||||| ||||||||  ||||||||| |||||| |||||||||||||||||||| |||||||| ||    
T  4442168 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccggtcgaggtatgaacactaagagtattctgtgatgccattcggagtatccaa 4442069  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    ||||||||||||||| |||||||| ||||||| |||||| ||||||| ||||||||||| ||||    
T  4442068 tgcgccaggtgtcttcatggaatatatgaatataatattccatccttttctggaccgttttgtg 4442005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 21 - 184
Target Start/End: Complemental strand, 13458275 - 13458112
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    ||||| ||||||||||||||| | ||||||||||| |||| | ||||||||| |||||||||||||||||||||| ||||||| ||||||||||||| ||    
T  13458275 atcattagattagagtgaaggcgaaagatatatccgaaaccgtgttccgaacaaggtatggacactatgagtattttgtgatgtcatttggagtatccaa 13458176  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    ||||||||||||||| |||||||| |||||||||| ||| ||||||| || ||| |||| ||||    
T  13458175 tgcgccaggtgtcttcatggaatatatgaatagaacattccatccttttcaggatcgttttgtg 13458112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 34 - 176
Target Start/End: Original strand, 15716946 - 15717088
Alignment:
Q  34 agtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtc 133  Q
    |||||||| ||| |||||||||||||||||||||||||| || ||||| |||||||| |||||||| |||||||||||  || |||||| |||  |||||    
T  15716946 agtgaaggcggaggatatatccaaaactgcgttccgaactagatatggtcactatgaatattctgtaatgccatttggtctaactaatgtgcctagtgtc 15717045  T
Q  134 tttatggaatacatgaatagaatatttcatccttatctggacc 176  Q
    || |||||||| |||||||||||||| ||||||| ||||||||    
T  15717046 ttcatggaatatatgaatagaatattccatccttttctggacc 15717088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 69 - 174
Target Start/End: Original strand, 17143354 - 17143459
Alignment:
Q  69 gaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatcctta 168  Q
    |||||||||||||||||||||| ||||||| |||| ||||||| ||  ||||| |||| |||||||| |||||||| ||||||||||| || ||||||||    
T  17143354 gaacgaggtatggacactatgaatattctgcgatgtcatttggtgtgactaatacgcccggtgtcttcatggaatatatgaatagaatcttccatcctta 17143453  T
Q  169 tctgga 174  Q
    | ||||    
T  17143454 tttgga 17143459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 165
Target Start/End: Original strand, 39178 - 39320
Alignment:
Q  23 catcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatg 122  Q
    ||||||||  ||||||||  |||||||||||  || ||||| ||| ||||  | ||||| || ||||||||||| |||||||| |||||||| || || |    
T  39178 catcagatacgagtgaagtcggaagatatattgaagactgccttcagaacccgttatggtcattatgagtattcggtgatgccttttggagtgtccaacg 39277  T
Q  123 cgccaggtgtctttatggaatacatgaatagaatatttcatcc 165  Q
    ||||||| || |||||||| || ||||| ||||| || |||||    
T  39278 cgccaggagtttttatggagtatatgaacagaattttccatcc 39320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 174
Target Start/End: Original strand, 12204904 - 12204961
Alignment:
Q  117 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctgga 174  Q
    |||||||||| ||||| |||||||| |||||||||||||| || ||| ||||||||||    
T  12204904 ctaatgcgcctggtgtgtttatggagtacatgaatagaattttccatgcttatctgga 12204961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 174
Target Start/End: Original strand, 14262349 - 14262406
Alignment:
Q  117 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctgga 174  Q
    |||||||||| ||||| |||||||| || ||||||||||| || ||| ||||||||||    
T  14262349 ctaatgcgcctggtgtgtttatggagtatatgaatagaattttccatgcttatctgga 14262406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 169
Target Start/End: Original strand, 48813338 - 48813430
Alignment:
Q  77 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttat 169  Q
    |||||||| || || ||||| |||||||| || || ||  ||||||||||| |||| |||||||| ||||||||| | || |||||| |||||    
T  48813338 tatggacattacgaatattcagtgatgcctttcggtgttactaatgcgccaagtgtgtttatggagtacatgaattgtatttttcatgcttat 48813430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 148; Significance: 3e-78; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 21 - 184
Target Start/End: Complemental strand, 23507849 - 23507686
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23507849 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 23507750  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23507749 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 23507686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 21 - 184
Target Start/End: Complemental strand, 24583375 - 24583212
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    |||||||||||||||| ||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24583375 atcatcagattagagtaaaggcaaaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 24583276  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24583275 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 24583212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 21935391 - 21935554
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    |||||||||||||||| ||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  21935391 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaa 21935490  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21935491 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 21935554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 174
Target Start/End: Original strand, 20250499 - 20250640
Alignment:
Q  33 gagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgt 132  Q
    |||||||  |||||||||| || || |||||||| ||||| ||||||||||| |||||||||| | | ||||||||||| ||| |||| | | |||||      
T  20250499 gagtgaaaatggaagatatttctaagactgcgtttcgaacaaggtatggacattatgagtattttattatgccatttggtgtaactaacgtgtcaggtaa 20250598  T
Q  133 ctttatggaatacatgaatagaatatttcatccttatctgga 174  Q
    |||||||||||| |||||||| || || ||||||||| ||||    
T  20250599 ctttatggaatatatgaataggattttccatccttatttgga 20250640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 151
Target Start/End: Original strand, 21337595 - 21337627
Alignment:
Q  119 aatgcgccaggtgtctttatggaatacatgaat 151  Q
    |||||||||||||| ||||||||||||||||||    
T  21337595 aatgcgccaggtgtgtttatggaatacatgaat 21337627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 148; Significance: 3e-78; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 8272659 - 8272822
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    |||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8272659 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 8272758  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  8272759 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 8272822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 21 - 184
Target Start/End: Complemental strand, 15611983 - 15611820
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15611983 atcatcagattagagtgaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 15611884  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  15611883 tgcaccaggtgtctttatggaatatatgaatagaatatttcatccttatctggaccgttttgtg 15611820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 21 - 184
Target Start/End: Complemental strand, 30139686 - 30139523
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30139686 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 30139587  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  30139586 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 30139523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 21 - 184
Target Start/End: Complemental strand, 30149237 - 30149074
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30149237 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 30149138  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  30149137 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 30149074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 13965612 - 13965775
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    |||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  13965612 atcatcagattagagtaaaggcggtagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 13965711  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13965712 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 13965775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 21 - 177
Target Start/End: Original strand, 15948730 - 15948886
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    |||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  15948730 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattccgtgatgccatttggagtatccaa 15948829  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccg 177  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  15948830 tgcgccaggtgtctttatggaatatatgaatagaatatttcatccttatttggaccg 15948886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 6151113 - 6151276
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    |||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6151113 atcatcagattagagtgaaggcagaagatatatccaaaactgtgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaa 6151212  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    ||||||||||||||||||||| || ||||||| |||||||||||||||||| ||||||| ||||    
T  6151213 tgcgccaggtgtctttatggagtatatgaataaaatatttcatccttatctagaccgttttgtg 6151276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 21 - 184
Target Start/End: Complemental strand, 25768198 - 25768035
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    ||||||||||||||||||| |  || |||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  25768198 atcatcagattagagtgaaagcagatgatatatccaaaaccgcgttccaaacaaggtatggacactatgagtattctgtgatgccattcggagtatctaa 25768099  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    | ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||    
T  25768098 ttcgccaggtgtcttcatggaatatatgaatagaatatttcatccttatctggaccgttttgtg 25768035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 148; Significance: 3e-78; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 20829485 - 20829648
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20829485 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 20829584  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20829585 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 20829648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 21 - 184
Target Start/End: Complemental strand, 20927320 - 20927157
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    |||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20927320 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 20927221  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  20927220 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacagttttgtg 20927157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 21 - 184
Target Start/End: Complemental strand, 20527319 - 20527156
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    |||||| ||||||||||||||  ||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20527319 atcatctgattagagtgaaggcagaagataaatccaaaaccgcattccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 20527220  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  20527219 tgcaccaggtgtctttatagaatacatgaatagaatatttcatccttatctggaccgttttgtg 20527156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 21 - 179
Target Start/End: Original strand, 41215949 - 41216107
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||    
T  41215949 atcatcagattagagtgaaggtgtaagatatatccaaaaccgcgttccgaacgaggtatggaaactatgagtattctgtgatgccatttggagtatccaa 41216048  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgtt 179  Q
    |||||||||||| || ||| |||| |||||||||||||||||||||| |||||||||||    
T  41216049 tgcgccaggtgttttcatgcaatatatgaatagaatatttcatccttttctggaccgtt 41216107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 42 - 172
Target Start/End: Original strand, 21200993 - 21201123
Alignment:
Q  42 tggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatgga 141  Q
    |||| ||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||| | ||  ||||| ||||  ||||||| |||||    
T  21200993 tggaggatatatccaaaactgcgttccgaacgagatatggtcactatgaatattctgtgatgccatttagtgtgactaatacgccgagtgtcttcatgga 21201092  T
Q  142 atacatgaatagaatatttcatccttatctg 172  Q
    ||| |||||||||||||||||||||||||||    
T  21201093 atatatgaatagaatatttcatccttatctg 21201123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 22133857 - 22133963
Alignment:
Q  29 attagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccag 128  Q
    |||||||| |||| ||||||||||||||| || |||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22133857 attagagtaaaggcggaagatatatccaagaccgcgttatgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaatgcgccag 22133956  T
Q  129 gtgtctt 135  Q
    |||||||    
T  22133957 gtgtctt 22133963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 35930918 - 35930987
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatga 90  Q
    ||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||    
T  35930918 atcatcagattagagtgaaggcggaagatatatccaaaaccacgttccgaacgaggtatggacactatga 35930987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 144; Significance: 8e-76; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 21 - 184
Target Start/End: Complemental strand, 42540 - 42377
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42540 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaa 42441  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  42440 tgcgctaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 42377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 144; Significance: 8e-76; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 24829749 - 24829912
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    |||||||||||||||| |||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24829749 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 24829848  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24829849 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 24829912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 21 - 184
Target Start/End: Complemental strand, 22279987 - 22279824
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    |||||||||| ||||| |||   ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22279987 atcatcagatcagagtaaagactgaatatatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 22279888  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  22279887 tgcgccatgtgtctttatggaatacatgaatagaatattttatccttatctggaccgttttgtg 22279824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 21 - 177
Target Start/End: Complemental strand, 25130491 - 25130335
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  25130491 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctatgatgccatttggagtatccaa 25130392  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccg 177  Q
    |||||||||||||||  ||||||| ||||||||||||||||||||||  ||||||||    
T  25130391 tgcgccaggtgtcttcctggaatatatgaatagaatatttcatcctttcctggaccg 25130335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 24568229 - 24568392
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    ||||||| ||||||||||||| ||||||||||||||||||  |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  24568229 atcatcatattagagtgaaggcggaagatatatccaaaaccacgttccaaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaa 24568328  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    |||  |||||||||| ||||| || |||||||||||||||||||||||||||||||||| ||||    
T  24568329 tgcatcaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtg 24568392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 22760130 - 22760293
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    ||||||| ||||||||||||| |||||||||||||||||| | ||||  ||| ||||||||||||||||||||||||||||||||||||||||||||  |    
T  22760130 atcatcatattagagtgaaggcggaagatatatccaaaaccgtgttcaaaacaaggtatggacactatgagtattctgtgatgccatttggagtatccga 22760229  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    ||||| ||||||||| ||||| || ||||||||||||||||||||||| |||||||||| ||||    
T  22760230 tgcgctaggtgtcttcatggagtatatgaatagaatatttcatccttacctggaccgttttgtg 22760293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 55 - 174
Target Start/End: Original strand, 10037927 - 10038046
Alignment:
Q  55 caaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaataga 154  Q
    ||||||||| || |||||||||||||| |||||||| || | ||||||| ||||||| ||  |||||||||  |||||||| ||||||||||||||||||    
T  10037927 caaaactgcatttcgaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaatacatgaataga 10038026  T
Q  155 atatttcatccttatctgga 174  Q
    || || ||||||||| ||||    
T  10038027 atcttccatccttatttgga 10038046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 55 - 174
Target Start/End: Original strand, 10098312 - 10098431
Alignment:
Q  55 caaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaataga 154  Q
    ||||||||| || |||||||||||||| |||||||| || | ||||||| ||||||| ||  |||||||||  |||||||| ||||||||||||||||||    
T  10098312 caaaactgcatttcgaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaatacatgaataga 10098411  T
Q  155 atatttcatccttatctgga 174  Q
    || || ||||||||| ||||    
T  10098412 atcttccatccttatttgga 10098431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 174
Target Start/End: Complemental strand, 23112522 - 23112465
Alignment:
Q  117 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctgga 174  Q
    ||||||||||  |||| |||||||| |||||||||||||| || ||| ||||||||||    
T  23112522 ctaatgcgcctagtgtgtttatggagtacatgaatagaattttccatgcttatctgga 23112465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 140; Significance: 2e-73; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 21 - 184
Target Start/End: Complemental strand, 7435 - 7272
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    |||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7435 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgtcatttggagtatctaa 7336  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7335 tgcgccaggtgtttttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 7272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 21 - 184
Target Start/End: Complemental strand, 493 - 330
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    |||| ||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  493 atcaccagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgtcatttggagtatctaa 394  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  393 tgcgccaggtgtttttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 140; Significance: 2e-73; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 21 - 176
Target Start/End: Original strand, 15291179 - 15291334
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    |||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15291179 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 15291278  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 176  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15291279 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccttatctggacc 15291334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 47 - 184
Target Start/End: Original strand, 12340912 - 12341049
Alignment:
Q  47 gatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataca 146  Q
    |||||||||||||| |||||||||||  || |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||| |    
T  12340912 gatatatccaaaaccgcgttccgaacagggaatggacactatgagtattctgtgatgccatttggagtgactaatgcgccaggtgtcttcatggaatata 12341011  T
Q  147 tgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    ||||||| ||||| ||||||| ||||||| ||| ||||    
T  12341012 tgaataggatattccatccttttctggactgttttgtg 12341049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 174
Target Start/End: Complemental strand, 15323372 - 15323315
Alignment:
Q  117 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctgga 174  Q
    |||||||||| ||||| ||||||||||||||||||||||| || ||| ||||||||||    
T  15323372 ctaatgcgcctggtgtgtttatggaatacatgaatagaattttccatgcttatctgga 15323315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 14696308 - 14696235
Alignment:
Q  77 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaa 150  Q
    |||||||| ||| | ||||| |||||||| ||||| ||  | |||||||||||||| |||||||| ||||||||    
T  14696308 tatggacattattaatattcagtgatgccttttggtgttacaaatgcgccaggtgtgtttatggagtacatgaa 14696235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 174
Target Start/End: Complemental strand, 15072514 - 15072457
Alignment:
Q  117 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctgga 174  Q
    |||||||||| ||||| |||||||| |||||||||||| | || ||| ||||||||||    
T  15072514 ctaatgcgcctggtgtgtttatggagtacatgaatagagttttccatgcttatctgga 15072457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 139; Significance: 8e-73; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 21 - 179
Target Start/End: Original strand, 7885 - 8043
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    |||||||||||||||| |||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7885 atcatcagattagagtaaaggcgaaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 7984  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgtt 179  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7985 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgtt 8043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 26290 - 26453
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    ||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26290 atcatcagattagagtgaaggcggaagagatatccaaaaccgcgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaa 26389  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    |||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||| ||||    
T  26390 tgcgccaggtgtctttctggaatgcatgaatagagtatttcatccttatctggaccgttttgtg 26453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 5830 - 5995
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    |||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5830 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 5929  T
Q  121 tgcgccaggtgtcttta-tggaatacatgaat-agaatatttcatccttatctggaccgttctgtg 184  Q
    ||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||| ||||    
T  5930 tgcgccaggtgtctttattgaaatacatgaataagaatatttcatccttatctggaccgttttgtg 5995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 128; Significance: 3e-66; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 21 - 176
Target Start/End: Original strand, 1976 - 2131
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    ||||||| ||||||||||||| |||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1976 atcatcaaattagagtgaaggcggaagatatatccaaaaccgcattccgaacgaggtatagacactatgagtattctgtgatgccatttggagtatctaa 2075  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 176  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2076 tgcaccaggtgtctttatggaataaatgaatagaatatttcatccttatctggacc 2131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 25 - 184
Target Start/End: Complemental strand, 26605 - 26446
Alignment:
Q  25 tcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcg 124  Q
    |||||| |||||||||| ||||||||||||||| || || |||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  26605 tcagatgagagtgaaggcggaagatatatccaataccgctttccgaacaaggtatggacactatgagtattctgtgatgtcatttagagtatctaatgcg 26506  T
Q  125 ccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    ||||||||||| |||||||| |||||||||||||||||||||| ||||||||||| ||||    
T  26505 ccaggtgtcttcatggaatatatgaatagaatatttcatccttttctggaccgttttgtg 26446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1488 (Bit Score: 124; Significance: 7e-64; HSPs: 1)
Name: scaffold1488
Description:

Target: scaffold1488; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 21 - 176
Target Start/End: Original strand, 827 - 982
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||    
T  827 atcatcagattagagtgaaggcggaagatatatccaaaactgtgttccgaacgaggtatgaacactatgagtattctgtgatgccatttggagtatccaa 926  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 176  Q
    |||||||| |||||| |||||||| |||||||||||||||||||||||| ||||||    
T  927 tgcgccagttgtcttcatggaatatatgaatagaatatttcatccttatttggacc 982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 124; Significance: 7e-64; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 21 - 184
Target Start/End: Complemental strand, 34367 - 34204
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    |||||||||||||||| |||| |||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  34367 atcatcagattagagtaaaggcggaagatatacccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 34268  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    ||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||| ||||    
T  34267 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtg 34204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 124; Significance: 7e-64; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 21 - 184
Target Start/End: Complemental strand, 24458 - 24295
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||    
T  24458 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgttccgaacaaggtatggacactatgagtatgctgtgatgccatttggagtatcgaa 24359  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    ||||| |||||||||| |||| || |||||||||||||||||||||||||||||||||| ||||    
T  24358 tgcgctaggtgtctttgtggagtatatgaatagaatatttcatccttatctggaccgttttgtg 24295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 124; Significance: 7e-64; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 8850 - 9013
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    |||||||||| || || |||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8850 atcatcagataagggtaaaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 8949  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    ||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||    
T  8950 tgcaccaggtgtctttatgggatacatgaatagaatatttcatccttatctggatcgttttgtg 9013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 21 - 179
Target Start/End: Original strand, 6953 - 7111
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  6953 atcatcagattagagtgaaggcggaagatatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 7052  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgtt 179  Q
    ||| ||||||||||| || || || ||||||| ||||||||||||||||||||||||||    
T  7053 tgcaccaggtgtcttcattgagtatatgaataaaatatttcatccttatctggaccgtt 7111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 7029 - 7192
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    ||||||| ||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||    
T  7029 atcatcatattagagtgaaggcggaagatatatccaaaacagcgttccaaacgaggtatggacactatgggtattctgtgatgccatttggagtatccaa 7128  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||| ||||||||| ||||    
T  7129 tgcgccaggtatcttcatggaatatatgaatagaatatttcatccttatatggaccgttttgtg 7192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 1645 - 1808
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    |||||||||||||||||||||  |||||| |||||||||| ||||||||||| ||||||||| ||||||||||||| || |||||||||||||| || ||    
T  1645 atcatcagattagagtgaaggcagaagatgtatccaaaaccgcgttccgaacaaggtatggaaactatgagtattccgtaatgccatttggagtttccaa 1744  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  1745 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtg 1808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 120; Significance: 2e-61; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 132513 - 132676
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    |||||||||||||||| ||||  |||||||||||| |||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  132513 atcatcagattagagtaaaggctgaagatatatcccaaaccgcgttccgaacgagatatggacactatgagtactctgtgatgccatttggagtatctaa 132612  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||    
T  132613 tgcgcccggtgtctttatggaatacatgaatagaatattttatccttatctggactgttttgtg 132676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 21 - 132
Target Start/End: Complemental strand, 26049 - 25938
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    |||||| |||||||||||||| |||||||||||||| ||| ||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||  ||    
T  26049 atcatccgattagagtgaaggcggaagatatatccataaccgcgttccaaacgaagtatggacactatgagtattctgtgatgccatttagagtatgcaa 25950  T
Q  121 tgcgccaggtgt 132  Q
    ||||||||||||    
T  25949 tgcgccaggtgt 25938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 119; Significance: 7e-61; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 21 - 159
Target Start/End: Complemental strand, 7026 - 6888
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    |||||||||||||||| |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7026 atcatcagattagagtaaaggcggaagatatattcaaaacttcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 6927  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatt 159  Q
    ||| |||||||||||||||||||||||||||||||||||    
T  6926 tgcaccaggtgtctttatggaatacatgaatagaatatt 6888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 1908 - 2071
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    |||||||||||||||| |||| |||||||||||||||||| |||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  1908 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttctgatcgaggtatggacactatgagtattcggtgatgccatttggagtatctaa 2007  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    ||| ||||||||||| ||||| || |||||||||||||||||||||||||||||| ||| ||||    
T  2008 tgcaccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggactgttttgtg 2071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 21 - 184
Target Start/End: Complemental strand, 16340 - 16177
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    ||||||| |||||| |||| | |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||    
T  16340 atcatcaaattagaatgaatgcggaagatatatctaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccattttgagtatccaa 16241  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    |||| |||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||    
T  16240 tgcgtcaggtgtcttcatggaatacatgaatagaatatttcaaccttatctggaccgttttgtg 16177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 21 - 179
Target Start/End: Original strand, 970 - 1128
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    ||||||||||||||||||||| |||||||||| | |||||   ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||    
T  970 atcatcagattagagtgaaggcggaagatatacctaaaaccatgttccgaacgaggtatggacactatgagtattctgtgatgccatttgcagtatccaa 1069  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgtt 179  Q
    |||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||    
T  1070 tgcgccaggtatcttcatggaatatatgaatagaatatttcatccttatctggaccgtt 1128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 112; Significance: 1e-56; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 21871 - 22034
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    ||||||| ||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||  |||||| ||    
T  21871 atcatcatattagagtgaaggcggaagatatattcaaaaccgcgttccgaacgaggtatggacactatgagtattatgtgatgccatttaaagtatccaa 21970  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    ||| ||||||||||| |||||||| |||||||||||||||||||||||||||||| ||| ||||    
T  21971 tgcaccaggtgtcttcatggaatatatgaatagaatatttcatccttatctggactgttttgtg 22034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 31447 - 31610
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    ||||||| ||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||  |||||| ||    
T  31447 atcatcatattagagtgaaggcggaagatatattcaaaaccgcgttccgaacgaggtatggacactatgagtattatgtgatgccatttaaagtatccaa 31546  T
Q  121 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttctgtg 184  Q
    ||| ||||||||||| |||||||| |||||||||||||||||||||||||||||| ||| ||||    
T  31547 tgcaccaggtgtcttcatggaatatatgaatagaatatttcatccttatctggactgttttgtg 31610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 79 - 184
Target Start/End: Complemental strand, 7438 - 7333
Alignment:
Q  79 tggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgt 178  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| || ||||||| ||||||||||||||||||| |||||    
T  7438 tggacactatgagtattatgtgatgccatttggagtatctaatgcgccaggtgtcttcatggagtatatgaatataatatttcatccttatctgaaccgt 7339  T
Q  179 tctgtg 184  Q
    | ||||    
T  7338 tttgtg 7333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 32 - 172
Target Start/End: Complemental strand, 378 - 238
Alignment:
Q  32 agagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtg 131  Q
    |||||||||| |||| ||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  378 agagtgaaggcggaatatatatccaaaatcgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtg 279  T
Q  132 tctttatggaatacatgaatagaatatttcatccttatctg 172  Q
    |||| || || || |||||||||||||||||||||||||||    
T  278 tcttcatagagtatatgaatagaatatttcatccttatctg 238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 21 - 125
Target Start/End: Complemental strand, 2221 - 2117
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 120  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2221 atcatcagattagagtgaaggcggaagatatatccaaaactgtgttccgaacgaggtatggacactatgagtattatgtgatgccatttggagtatctaa 2122  T
Q  121 tgcgc 125  Q
    |||||    
T  2121 tgcgc 2117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0719 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0719
Description:

Target: scaffold0719; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 105
Target Start/End: Complemental strand, 4850 - 4785
Alignment:
Q  40 ggtggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgcc 105  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  4850 ggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctatgatgcc 4785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 55 - 174
Target Start/End: Complemental strand, 9143 - 9024
Alignment:
Q  55 caaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaataga 154  Q
    ||||||||| || |||||||||||||| |||||||| || | ||||||| ||||||| ||  |||||||||  |||||||| ||||||||||||||||||    
T  9143 caaaactgcatttcgaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaatacatgaataga 9044  T
Q  155 atatttcatccttatctgga 174  Q
    || || ||||||||| ||||    
T  9043 atcttccatccttatttgga 9024  T

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Target: scaffold0465 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 13649 - 13707
Alignment:
Q  21 atcatcagattagagtgaaggtggaagatatatccaaaactgcgttccgaacgaggtat 79  Q
    |||||||||||| ||||||||   |||||||||||||||| ||||||||||||||||||    
T  13649 atcatcagattacagtgaaggcaaaagatatatccaaaaccgcgttccgaacgaggtat 13707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 174
Target Start/End: Original strand, 5209 - 5266
Alignment:
Q  117 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctgga 174  Q
    |||||||||| ||||| |||||||| |||||||||||||| || ||| ||||||||||    
T  5209 ctaatgcgcctggtgtgtttatggagtacatgaatagaattttccatgcttatctgga 5266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 151
Target Start/End: Original strand, 9114 - 9188
Alignment:
Q  77 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaat 151  Q
    |||||||| ||||| ||||| |||||||| || || ||  | |||||||||||||| |||||||| |||||||||    
T  9114 tatggacattatgaatattcagtgatgcctttcggtgttacaaatgcgccaggtgtgtttatggagtacatgaat 9188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0827 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0827
Description:

Target: scaffold0827; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 5332 - 5259
Alignment:
Q  77 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaa 150  Q
    ||||| || ||||||||||| |||||||| |||||||| || || |||||||| || |||||||| || |||||    
T  5332 tatggtcattatgagtattcggtgatgccttttggagtgtccaacgcgccaggagtgtttatggagtatatgaa 5259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 174
Target Start/End: Original strand, 121 - 178
Alignment:
Q  117 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctgga 174  Q
    |||||||||| ||||| || ||||| || ||||||||||| |||||| ||||||||||    
T  121 ctaatgcgcctggtgtgttcatggagtatatgaatagaatttttcatgcttatctgga 178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 174
Target Start/End: Complemental strand, 114745 - 114688
Alignment:
Q  117 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctgga 174  Q
    |||||||||| ||||| || |||||||| ||||||||||| |||||| |||| |||||    
T  114745 ctaatgcgcctggtgtgttcatggaatatatgaatagaatttttcatgcttacctgga 114688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 174
Target Start/End: Complemental strand, 50996 - 50939
Alignment:
Q  117 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctgga 174  Q
    |||||||||| ||||| |||||||| || ||||||||||| |||||| | ||||||||    
T  50996 ctaatgcgcctggtgtgtttatggagtatatgaatagaatttttcatgcctatctgga 50939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 174
Target Start/End: Original strand, 176464 - 176521
Alignment:
Q  117 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctgga 174  Q
    |||||||||| ||||| |||||||| |||||||||||||| || ||| ||||| ||||    
T  176464 ctaatgcgcctggtgtgtttatggagtacatgaatagaattttccatgcttatttgga 176521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 151
Target Start/End: Complemental strand, 6055 - 6023
Alignment:
Q  119 aatgcgccaggtgtctttatggaatacatgaat 151  Q
    |||||||||||||| ||||||||||||||||||    
T  6055 aatgcgccaggtgtgtttatggaatacatgaat 6023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 151
Target Start/End: Complemental strand, 13185 - 13153
Alignment:
Q  119 aatgcgccaggtgtctttatggaatacatgaat 151  Q
    |||||||||||||| ||||||||||||||||||    
T  13185 aatgcgccaggtgtgtttatggaatacatgaat 13153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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