View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0755_low_163 (Length: 249)

Name: NF0755_low_163
Description: NF0755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0755_low_163
NF0755_low_163
[»] chr8 (35 HSPs)
chr8 (81-249)||(41598421-41598596)
chr8 (81-246)||(22875302-22875474)
chr8 (81-249)||(6759493-6759669)
chr8 (81-249)||(22626972-22627147)
chr8 (81-249)||(20536445-20536620)
chr8 (81-140)||(19801252-19801311)
chr8 (85-249)||(18878946-18879117)
chr8 (92-248)||(18818120-18818282)
chr8 (172-249)||(23406715-23406793)
chr8 (81-135)||(28648874-28648928)
chr8 (92-144)||(13507905-13507957)
chr8 (92-144)||(13597437-13597489)
chr8 (172-243)||(21674040-21674111)
chr8 (81-140)||(22963244-22963303)
chr8 (81-140)||(40492677-40492736)
chr8 (172-249)||(7373083-7373161)
chr8 (82-249)||(16092050-16092224)
chr8 (81-140)||(14103049-14103108)
chr8 (81-140)||(20533233-20533292)
chr8 (81-249)||(21923637-21923812)
chr8 (81-140)||(23668046-23668105)
chr8 (81-135)||(23648790-23648844)
chr8 (173-249)||(5865986-5866061)
chr8 (173-249)||(21255556-21255631)
chr8 (88-140)||(16799732-16799784)
chr8 (81-141)||(19154709-19154769)
chr8 (151-213)||(21918745-21918815)
chr8 (81-140)||(17439330-17439389)
chr8 (81-140)||(22525753-22525812)
chr8 (172-239)||(26355417-26355484)
chr8 (83-129)||(7373009-7373055)
chr8 (173-214)||(25362884-25362926)
chr8 (173-249)||(17141250-17141325)
chr8 (173-249)||(21249718-21249793)
chr8 (173-249)||(28648753-28648829)
[»] chr1 (17 HSPs)
chr1 (81-249)||(433244-433419)
chr1 (81-249)||(50209922-50210097)
chr1 (83-167)||(16758890-16758974)
chr1 (81-249)||(34510017-34510192)
chr1 (172-245)||(22354285-22354359)
chr1 (83-144)||(21342332-21342393)
chr1 (83-144)||(21347197-21347258)
chr1 (81-249)||(22532506-22532681)
chr1 (81-171)||(35260873-35260964)
chr1 (173-243)||(33681345-33681415)
chr1 (172-243)||(20248612-20248683)
chr1 (81-141)||(20346041-20346101)
chr1 (81-172)||(26065176-26065268)
chr1 (81-140)||(27653047-27653106)
chr1 (81-140)||(52940702-52940761)
chr1 (173-249)||(20918938-20919013)
chr1 (81-130)||(27250564-27250613)
[»] chr5 (25 HSPs)
chr5 (81-249)||(36154537-36154712)
chr5 (81-249)||(11580954-11581129)
chr5 (86-244)||(22144292-22144457)
chr5 (81-249)||(13095731-13095906)
chr5 (81-249)||(21985856-21986031)
chr5 (81-249)||(1096704-1096879)
chr5 (81-248)||(9078189-9078363)
chr5 (81-240)||(25421769-25421935)
chr5 (172-249)||(23390205-23390283)
chr5 (81-249)||(13025547-13025722)
chr5 (81-249)||(24529457-24529633)
chr5 (81-249)||(24493805-24493980)
chr5 (81-249)||(25431631-25431806)
chr5 (173-249)||(22119902-22119977)
chr5 (173-243)||(21565880-21565950)
chr5 (172-243)||(22959248-22959319)
chr5 (172-246)||(21871283-21871357)
chr5 (172-246)||(21875563-21875637)
chr5 (173-249)||(24767046-24767121)
chr5 (81-140)||(25574294-25574353)
chr5 (81-140)||(25575487-25575546)
chr5 (81-140)||(25576680-25576739)
chr5 (81-135)||(26740476-26740530)
chr5 (107-140)||(21328039-21328072)
chr5 (85-126)||(22120033-22120074)
[»] chr4 (34 HSPs)
chr4 (81-249)||(44928632-44928807)
chr4 (85-249)||(44102451-44102622)
chr4 (81-249)||(14038885-14039061)
chr4 (81-249)||(15091133-15091309)
chr4 (81-172)||(52242986-52243077)
chr4 (85-244)||(21815346-21815511)
chr4 (85-249)||(44053070-44053241)
chr4 (81-248)||(16377232-16377407)
chr4 (94-249)||(21815012-21815173)
chr4 (94-249)||(21818434-21818595)
chr4 (81-249)||(22636671-22636846)
chr4 (173-249)||(24029078-24029153)
chr4 (81-172)||(15464722-15464814)
chr4 (181-248)||(16239703-16239769)
chr4 (172-249)||(16596981-16597057)
chr4 (173-248)||(7799032-7799108)
chr4 (173-248)||(13812519-13812593)
chr4 (173-239)||(3332222-3332287)
chr4 (81-140)||(17333517-17333576)
chr4 (188-249)||(6190783-6190845)
chr4 (90-144)||(15868531-15868585)
chr4 (81-135)||(16239800-16239854)
chr4 (81-214)||(3096880-3097020)
chr4 (208-243)||(8846746-8846781)
chr4 (81-214)||(12902994-12903134)
chr4 (81-128)||(17047909-17047956)
chr4 (173-214)||(7089212-7089254)
chr4 (173-214)||(17047816-17047858)
chr4 (107-140)||(14852700-14852733)
chr4 (81-126)||(16043249-16043294)
chr4 (85-126)||(20157130-20157171)
chr4 (173-249)||(22633922-22633997)
chr4 (85-126)||(24028981-24029022)
chr4 (81-137)||(14825705-14825761)
[»] chr3 (35 HSPs)
chr3 (83-249)||(17247995-17248168)
chr3 (81-249)||(53070408-53070582)
chr3 (81-249)||(25476094-25476269)
chr3 (81-249)||(14572825-14573000)
chr3 (81-249)||(14576542-14576717)
chr3 (81-249)||(40213430-40213605)
chr3 (81-248)||(11424473-11424647)
chr3 (81-249)||(26687124-26687299)
chr3 (81-144)||(52523548-52523611)
chr3 (91-172)||(2050992-2051073)
chr3 (85-248)||(13442515-13442685)
chr3 (85-249)||(17488097-17488269)
chr3 (81-249)||(18438771-18438946)
chr3 (85-144)||(23274929-23274988)
chr3 (81-140)||(42386648-42386707)
chr3 (81-249)||(14973091-14973266)
chr3 (173-243)||(12934025-12934095)
chr3 (173-249)||(14669097-14669172)
chr3 (93-243)||(16097577-16097736)
chr3 (85-249)||(17499579-17499751)
chr3 (173-243)||(49667798-49667868)
chr3 (173-249)||(12340089-12340164)
chr3 (173-249)||(14665942-14666017)
chr3 (173-249)||(14735455-14735530)
chr3 (81-123)||(12339988-12340030)
chr3 (180-235)||(43841274-43841330)
chr3 (81-248)||(23083071-23083245)
chr3 (173-243)||(49389359-49389428)
chr3 (173-214)||(16809735-16809777)
chr3 (81-131)||(30030076-30030126)
chr3 (173-249)||(12852073-12852148)
chr3 (107-140)||(16839497-16839530)
chr3 (182-249)||(4588524-4588590)
chr3 (207-243)||(9513280-9513316)
chr3 (207-243)||(9521255-9521291)
[»] chr7 (28 HSPs)
chr7 (81-249)||(17061669-17061844)
chr7 (81-249)||(44116742-44116916)
chr7 (81-249)||(12756426-12756600)
chr7 (83-171)||(2279912-2280000)
chr7 (81-244)||(15143751-15143921)
chr7 (81-249)||(3564073-3564248)
chr7 (81-249)||(38227717-38227892)
chr7 (81-244)||(12255505-12255675)
chr7 (85-249)||(9509430-9509601)
chr7 (173-249)||(39267355-39267430)
chr7 (81-249)||(12699069-12699244)
chr7 (173-249)||(18302515-18302590)
chr7 (81-140)||(9033170-9033229)
chr7 (81-140)||(14036435-14036494)
chr7 (81-140)||(14044985-14045044)
chr7 (81-140)||(14346465-14346524)
chr7 (81-140)||(14355015-14355074)
chr7 (173-249)||(28505010-28505085)
chr7 (173-249)||(34201120-34201195)
chr7 (172-243)||(810844-810915)
chr7 (88-140)||(15008323-15008375)
chr7 (81-140)||(9177490-9177549)
chr7 (81-140)||(16091994-16092053)
chr7 (81-140)||(17017292-17017351)
chr7 (81-140)||(17060248-17060307)
chr7 (208-243)||(44014545-44014580)
chr7 (177-249)||(9751259-9751330)
chr7 (85-126)||(9751390-9751431)
[»] scaffold0413 (1 HSPs)
scaffold0413 (81-249)||(15324-15499)
[»] scaffold0839 (1 HSPs)
scaffold0839 (95-249)||(1786-1947)
[»] scaffold0142 (2 HSPs)
scaffold0142 (88-249)||(17024-17192)
scaffold0142 (176-249)||(7480-7552)
[»] scaffold0031 (1 HSPs)
scaffold0031 (85-249)||(20135-20305)
[»] scaffold0228 (3 HSPs)
scaffold0228 (81-249)||(4744-4920)
scaffold0228 (81-249)||(12326-12502)
scaffold0228 (81-249)||(22278-22454)
[»] chr6 (28 HSPs)
chr6 (84-249)||(18456955-18457126)
chr6 (173-249)||(29808592-29808669)
chr6 (81-249)||(20594010-20594185)
chr6 (81-249)||(19303250-19303425)
chr6 (81-249)||(29060777-29060952)
chr6 (81-144)||(25644559-25644622)
chr6 (81-249)||(18409536-18409711)
chr6 (81-246)||(25629067-25629239)
chr6 (173-249)||(28496182-28496258)
chr6 (180-249)||(22779936-22780006)
chr6 (93-243)||(19652442-19652601)
chr6 (172-249)||(4185532-4185609)
chr6 (81-214)||(18821563-18821703)
chr6 (174-249)||(17287505-17287581)
chr6 (172-244)||(27332998-27333070)
chr6 (172-244)||(27393738-27393810)
chr6 (81-128)||(17287633-17287680)
chr6 (81-140)||(18696724-18696783)
chr6 (81-140)||(20224180-20224239)
chr6 (81-140)||(22118164-22118223)
chr6 (172-249)||(4667922-4667999)
chr6 (173-249)||(21939720-21939795)
chr6 (81-214)||(20360704-20360844)
chr6 (85-214)||(20638027-20638163)
chr6 (81-132)||(22831739-22831790)
chr6 (81-140)||(33443282-33443341)
chr6 (86-139)||(18706548-18706601)
chr6 (81-140)||(20077998-20078058)
[»] scaffold0503 (1 HSPs)
scaffold0503 (81-249)||(12166-12340)
[»] chr2 (17 HSPs)
chr2 (81-249)||(23660259-23660434)
chr2 (83-172)||(23708411-23708500)
chr2 (81-249)||(22737889-22738064)
chr2 (81-249)||(23076679-23076852)
chr2 (81-249)||(32451638-32451813)
chr2 (85-144)||(19672068-19672127)
chr2 (173-249)||(27753910-27753987)
chr2 (180-249)||(22730942-22731012)
chr2 (172-249)||(298524-298601)
chr2 (81-249)||(22337352-22337527)
chr2 (172-243)||(28406314-28406385)
chr2 (81-140)||(23287600-23287659)
chr2 (173-249)||(23071672-23071747)
chr2 (81-172)||(20519984-20520076)
chr2 (81-140)||(18546769-18546828)
chr2 (81-131)||(23286098-23286148)
chr2 (81-131)||(23654220-23654270)
[»] scaffold0012 (1 HSPs)
scaffold0012 (81-168)||(225644-225731)
[»] scaffold0145 (1 HSPs)
scaffold0145 (81-249)||(38997-39171)
[»] scaffold0056 (2 HSPs)
scaffold0056 (81-249)||(16924-17099)
scaffold0056 (81-140)||(79154-79213)
[»] scaffold0003 (1 HSPs)
scaffold0003 (81-249)||(339660-339834)
[»] scaffold0292 (2 HSPs)
scaffold0292 (81-249)||(579-754)
scaffold0292 (81-249)||(3707-3882)
[»] scaffold0217 (1 HSPs)
scaffold0217 (81-249)||(16308-16484)
[»] scaffold0084 (1 HSPs)
scaffold0084 (81-243)||(10400-10571)
[»] scaffold0305 (1 HSPs)
scaffold0305 (86-249)||(20645-20815)
[»] scaffold0122 (2 HSPs)
scaffold0122 (81-249)||(25774-25949)
scaffold0122 (81-249)||(33203-33379)
[»] scaffold0352 (1 HSPs)
scaffold0352 (171-249)||(17717-17796)
[»] scaffold0016 (3 HSPs)
scaffold0016 (172-249)||(2185-2263)
scaffold0016 (173-249)||(207228-207303)
scaffold0016 (85-126)||(207359-207400)
[»] scaffold0080 (1 HSPs)
scaffold0080 (81-249)||(40149-40323)
[»] scaffold0011 (1 HSPs)
scaffold0011 (81-249)||(52150-52324)
[»] scaffold0042 (1 HSPs)
scaffold0042 (85-248)||(24012-24181)
[»] scaffold0175 (2 HSPs)
scaffold0175 (81-249)||(13329-13504)
scaffold0175 (173-249)||(34457-34532)
[»] scaffold0021 (1 HSPs)
scaffold0021 (85-232)||(124826-124980)
[»] scaffold0034 (1 HSPs)
scaffold0034 (81-249)||(51593-51768)
[»] scaffold0026 (5 HSPs)
scaffold0026 (173-249)||(26561-26637)
scaffold0026 (85-249)||(40097-40268)
scaffold0026 (81-135)||(26132-26186)
scaffold0026 (173-249)||(59212-59287)
scaffold0026 (209-249)||(39640-39680)
[»] scaffold0357 (2 HSPs)
scaffold0357 (81-140)||(13367-13426)
scaffold0357 (81-171)||(15892-15983)
[»] scaffold0141 (1 HSPs)
scaffold0141 (81-222)||(39713-39861)
[»] scaffold0049 (1 HSPs)
scaffold0049 (81-222)||(74951-75099)
[»] scaffold0540 (2 HSPs)
scaffold0540 (180-249)||(722-791)
scaffold0540 (81-129)||(2987-3035)
[»] scaffold0556 (1 HSPs)
scaffold0556 (172-243)||(7146-7217)
[»] scaffold0121 (1 HSPs)
scaffold0121 (84-249)||(8241-8413)
[»] scaffold0639 (1 HSPs)
scaffold0639 (81-249)||(8712-8887)
[»] scaffold0231 (1 HSPs)
scaffold0231 (81-171)||(23119-23209)
[»] scaffold0150 (1 HSPs)
scaffold0150 (173-243)||(32419-32489)
[»] scaffold0130 (1 HSPs)
scaffold0130 (81-218)||(28067-28212)
[»] scaffold0028 (1 HSPs)
scaffold0028 (173-243)||(132989-133059)
[»] scaffold0070 (1 HSPs)
scaffold0070 (81-246)||(4760-4932)
[»] scaffold0023 (1 HSPs)
scaffold0023 (173-243)||(101731-101800)
[»] scaffold0221 (1 HSPs)
scaffold0221 (173-249)||(12518-12593)
[»] scaffold0192 (1 HSPs)
scaffold0192 (173-249)||(10247-10322)
[»] scaffold0037 (1 HSPs)
scaffold0037 (173-249)||(80041-80116)
[»] scaffold1984 (1 HSPs)
scaffold1984 (148-243)||(434-536)
[»] scaffold0046 (2 HSPs)
scaffold0046 (84-140)||(16745-16801)
scaffold0046 (84-140)||(25905-25961)
[»] scaffold0010 (2 HSPs)
scaffold0010 (81-172)||(60506-60598)
scaffold0010 (93-244)||(130154-130314)
[»] scaffold0356 (1 HSPs)
scaffold0356 (81-140)||(486-545)
[»] scaffold0169 (1 HSPs)
scaffold0169 (81-140)||(29248-29307)
[»] scaffold0009 (1 HSPs)
scaffold0009 (81-140)||(85782-85841)
[»] scaffold0627 (1 HSPs)
scaffold0627 (180-249)||(247-316)
[»] scaffold0475 (1 HSPs)
scaffold0475 (172-249)||(9411-9488)
[»] scaffold0120 (3 HSPs)
scaffold0120 (81-135)||(16324-16378)
scaffold0120 (81-135)||(32789-32843)
scaffold0120 (81-135)||(46162-46216)
[»] scaffold0100 (1 HSPs)
scaffold0100 (180-249)||(20455-20524)
[»] scaffold0077 (1 HSPs)
scaffold0077 (81-139)||(55510-55568)
[»] scaffold0076 (1 HSPs)
scaffold0076 (81-139)||(24423-24481)
[»] scaffold0347 (1 HSPs)
scaffold0347 (173-249)||(365-440)
[»] scaffold0266 (1 HSPs)
scaffold0266 (204-249)||(18667-18712)
[»] scaffold0166 (1 HSPs)
scaffold0166 (173-249)||(9543-9618)
[»] scaffold0161 (1 HSPs)
scaffold0161 (173-249)||(2154-2229)
[»] scaffold0075 (1 HSPs)
scaffold0075 (173-249)||(8003-8078)
[»] scaffold0628 (1 HSPs)
scaffold0628 (172-243)||(2518-2588)
[»] scaffold0260 (1 HSPs)
scaffold0260 (81-141)||(8364-8424)
[»] scaffold0001 (1 HSPs)
scaffold0001 (172-243)||(161020-161091)
[»] scaffold0780 (1 HSPs)
scaffold0780 (81-140)||(3152-3211)
[»] scaffold0395 (1 HSPs)
scaffold0395 (81-215)||(704-847)
[»] scaffold0102 (1 HSPs)
scaffold0102 (208-243)||(19637-19672)
[»] scaffold0081 (1 HSPs)
scaffold0081 (81-140)||(4521-4580)
[»] scaffold0490 (1 HSPs)
scaffold0490 (81-131)||(2189-2239)
[»] scaffold0309 (1 HSPs)
scaffold0309 (81-131)||(6847-6897)
[»] scaffold0235 (1 HSPs)
scaffold0235 (81-131)||(11347-11397)
[»] scaffold0165 (2 HSPs)
scaffold0165 (173-214)||(3816-3858)
scaffold0165 (173-214)||(7880-7922)
[»] scaffold0107 (1 HSPs)
scaffold0107 (81-139)||(9910-9968)
[»] scaffold0218 (1 HSPs)
scaffold0218 (173-249)||(28989-29064)
[»] scaffold0124 (1 HSPs)
scaffold0124 (173-249)||(24360-24435)
[»] scaffold0047 (1 HSPs)
scaffold0047 (81-137)||(22515-22571)
[»] scaffold0005 (1 HSPs)
scaffold0005 (81-137)||(13948-14004)


Alignment Details
Target: chr8 (Bit Score: 134; Significance: 7e-70; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 41598421 - 41598596
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------c 173  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||       |    
T  41598421 ctaccccaaggttcaactctcaacgactcgtgcggcaaagatcgcaaaatcctaaacaagcattctgtaactaggtcactcgcgaggcgagagcctctgc 41598520  T
Q  174 tcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  41598521 tcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctttccaggttcaatctcattctacattc 41598596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 81 - 246
Target Start/End: Original strand, 22875302 - 22875474
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattttttaactaggtcactcgcgaggcgaga------- 172  Q
    |||||||||||||||||||| ||| ||| |||||||| ||||||||||  ||||| |||| || | | |  || |||||||||||||||||||           
T  22875302 ctaccccaaggttcaactcttaacaacttgtgcgacatagatcgcaaagccctaa-caagtcactctgtttctgggtcactcgcgaggcgagagcctctg 22875400  T
Q  173 ctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctaca 246  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||    
T  22875401 ctcgtcatggcgagttcaggtcagattcccaaagtttcattctaaaatctttccaggttcaacctcgttctaca 22875474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 6759493 - 6759669
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattttttaactaggtcactcgcgaggcgaga------- 172  Q
    |||||||||||||||||||| | | ||| |||||||| |||| |||||||||||| |||| || | | |  || |||||||||||||||||||           
T  6759493 ctaccccaaggttcaactcttagcaacttgtgcgacacagattgcaaaatcctaa-caagacactctgtttctgggtcactcgcgaggcgagagcctctg 6759591  T
Q  173 ctcgccatggcgagttcaggtcagattcccaaa-gtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||| |||||||||||||||||||| ||||| ||||||||||||||| | |||| |||||||||||||||||||||    
T  6759592 ctcgccgtggcgagttcaggtcagatttccaaaagtttcattctaaaatatttccaagttcaatctcattctacattc 6759669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 22626972 - 22627147
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattttttaactaggtcactcgcgaggcgaga------- 172  Q
    |||||||||||||||||||||||| |||||||| |||||| |||||||| ||||| |||| || | | |  |||| |||||||||||||||||           
T  22626972 ctaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaa-caagacactctgtttctagatcactcgcgaggcgagagcctctg 22627070  T
Q  173 ctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||| |||| ||||| ||||||||| |||||| ||||||||| ||||| || |||||||||||||| ||||||||    
T  22627071 ctcgccgtggcaagttcgggtcagatttccaaaggttcattctacaatctttcgaggttcaatctcatcctacattc 22627147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 20536445 - 20536620
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------c 173  Q
    ||||||||||||||||| ||| || |||||||| |||||| |||||||| |||||  |  || | | |  || |||||||||||||||||||       |    
T  20536445 ctaccccaaggttcaacactcgacaactcgtgcaacaaaggtcgcaaaa-cctaataagtcactctgtttctgggtcactcgcgaggcgagagcctctac 20536543  T
Q  174 tcgccatggcgagttcaggtcagattccca-aagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||| |||||||||||||||||| ||||| ||||||||||||| ||||| ||||||||||||||||| ||||||||    
T  20536544 tcgccgtggcgagttcaggtcagaatcccataagtttcattctacaatctttccaggttcaatctcatcctacattc 20536620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 140
Target Start/End: Complemental strand, 19801311 - 19801252
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  19801311 ctaccccaaggttcaactctcaatgactcgtgcgacaaagatcgaaaaatcctaaacaag 19801252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 85 - 249
Target Start/End: Complemental strand, 18879117 - 18878946
Alignment:
Q  85 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------ctcgc 177  Q
    ||||||||||||||||| || |||||||| ||||||  ||||||||| |||  | ||| | | |  || |||||||||||||||||||       ||||     
T  18879117 cccaaggttcaactctcgacaactcgtgcaacaaaggccgcaaaatc-taacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgctcgt 18879019  T
Q  178 catggcgagttcaggtcagattccca-aagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    | |||||||||||||||||| ||||| ||||||||||||| ||||| ||||||||||||||||| ||||||||    
T  18879018 cttggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattc 18878946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 92 - 248
Target Start/End: Complemental strand, 18818282 - 18818120
Alignment:
Q  92 ttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattttttaactaggtcactcgcgaggcgaga-------ctcgccatggc 183  Q
    ||||||||||||| |||||||| |||||| |||||||| ||||| |||| || | | |  || |||||||||||||||||||       |||||| ||||    
T  18818282 ttcaactctcaacaactcgtgcaacaaaggtcgcaaaa-cctaa-caagacactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggc 18818185  T
Q  184 gagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacatt 248  Q
    ||||||||||||||  || ||||||||||| || ||||| ||||||||||||||||| |||||||    
T  18818184 gagttcaggtcagaaaccaaaagtttcattttacaatctttccaggttcaatctcatcctacatt 18818120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 172 - 249
Target Start/End: Original strand, 23406715 - 23406793
Alignment:
Q  172 actcgccatggcgagttcaggtcagattccca-aagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||| |||||||||||||||||| ||||| ||||||||||||| ||||| ||||||| ||||||||| ||||||||    
T  23406715 actcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggtccaatctcatcctacattc 23406793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 28648928 - 28648874
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 135  Q
    |||||||||||||||||||||||| |||||||| |||||| ||||||||||||||    
T  28648928 ctaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaa 28648874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 144
Target Start/End: Complemental strand, 13507957 - 13507905
Alignment:
Q  92 ttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 144  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||| |||||    
T  13507957 ttcaactctcaacaactcgtgcgacaaagatcgcaaaaacctaaacatgcatt 13507905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 144
Target Start/End: Complemental strand, 13597489 - 13597437
Alignment:
Q  92 ttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 144  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||| |||||    
T  13597489 ttcaactctcaacaactcgtgcgacaaagatcgcaaaaacctaaacatgcatt 13597437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 243
Target Start/End: Original strand, 21674040 - 21674111
Alignment:
Q  172 actcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattct 243  Q
    ||||||||||||||||||||||   | || ||||  ||||||||||||||| ||||||||||||||||||||    
T  21674040 actcgccatggcgagttcaggtgcaactcacaaatattcattctaaaatctttccaggttcaatctcattct 21674111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 140
Target Start/End: Complemental strand, 22963303 - 22963244
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    ||||||||||| |||||||  |||  ||||||||||||||||||||||||||||||||||    
T  22963303 ctaccccaagggtcaactcataacatctcgtgcgacaaagatcgcaaaatcctaaacaag 22963244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 140
Target Start/End: Complemental strand, 40492736 - 40492677
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    ||||| ||||| ||||||| ||||  ||||||||||||||||||||||||||||||||||    
T  40492736 ctaccacaaggatcaactcacaacatctcgtgcgacaaagatcgcaaaatcctaaacaag 40492677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 249
Target Start/End: Original strand, 7373083 - 7373161
Alignment:
Q  172 actcgccatggcgagttcaggtcagattccca-aagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||| |||||||||||||||||| |  || ||||||||||||| ||||| |||||||||||| |||| ||||||||    
T  7373083 actcgccgtggcgagttcaggtcagaatttcacaagtttcattctacaatctttccaggttcaatttcatcctacattc 7373161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 249
Target Start/End: Complemental strand, 16092224 - 16092050
Alignment:
Q  82 taccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------ct 174  Q
    ||||||||||||||||||| ||| ||| ||| |||| |||||||||||||||||    ||| | | |  || ||||||||| |||||||||       ||    
T  16092224 taccccaaggttcaactcttaacaacttgtgtgacacagatcgcaaaatcctaacagggcactctgtttctgggtcactcgggaggcgagagcctctgct 16092125  T
Q  175 cgccatggcgagttcaggtcag-attcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||| ||||||||||||||||| ||||| |||||||  || | |||||| | |||||| |||||||||||||||||    
T  16092124 cgccgtggcgagttcaggtcagaattccaaaagttt-ttttttaaatcttttcaggtttaatctcattctacattc 16092050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 140
Target Start/End: Complemental strand, 14103108 - 14103049
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    ||||||||||| |||||||  |||  ||||||||||||||||||||||| ||||||||||    
T  14103108 ctaccccaaggatcaactcgtaacatctcgtgcgacaaagatcgcaaaaccctaaacaag 14103049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 140
Target Start/End: Complemental strand, 20533292 - 20533233
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    ||||||||||| |||||||  |||  ||||||||||||||||||||||| ||||||||||    
T  20533292 ctaccccaaggatcaactcataacatctcgtgcgacaaagatcgcaaaaccctaaacaag 20533233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 249
Target Start/End: Complemental strand, 21923812 - 21923637
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------c 173  Q
    ||||| |||||||||||||||||| ||||| || |||||| |||||||| |||||  | ||| | | |  || |||||||||||||||||||       |    
T  21923812 ctacctcaaggttcaactctcaactactcgggcaacaaaggtcgcaaaa-cctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgc 21923714  T
Q  174 tcgccatggcgagttca-ggtcagattcc-caaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    || || ||||||||||| ||||||| |||  ||||||||||||| |||||| | ||||||||||||||| ||||||||    
T  21923713 tcaccgtggcgagttcagggtcagaatccaaaaagtttcattct-aaatcttttcaggttcaatctcatcctacattc 21923637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 140
Target Start/End: Original strand, 23668046 - 23668105
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    ||||||||||| |||||||  |||  ||||||||||||||||||||||| ||||||||||    
T  23668046 ctaccccaagggtcaactcataacatctcgtgcgacaaagatcgcaaaaccctaaacaag 23668105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 23648790 - 23648844
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 135  Q
    |||||||||||||||||||||||| |||||||| |||||| ||||| || |||||    
T  23648790 ctaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcataaacctaa 23648844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 5866061 - 5865986
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattccc-aaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||||||||||||| |||||||||| | ||| |||||||||||  ||| | ||||||||||||||||||||||||    
T  5866061 ctcgccatggcgagttc-ggtcagattctctaaattttcattctaag-tcttttcaggttcaatctcattctacattc 5865986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 21255556 - 21255631
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattc-ccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||||||||||||| |||||||||| ||||| |||||||| ||  ||| ||||||||||||||||| ||||||||    
T  21255556 ctcgccatggcgagttc-ggtcagattctccaaattttcattccaag-tctttccaggttcaatctcatcctacattc 21255631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 140
Target Start/End: Original strand, 16799732 - 16799784
Alignment:
Q  88 aaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    |||| |||||||| |||| |||||||||||||||||| |||| ||||||||||    
T  16799732 aaggatcaactcttaacgtctcgtgcgacaaagatcgtaaaaccctaaacaag 16799784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 141
Target Start/End: Complemental strand, 19154769 - 19154709
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagc 141  Q
    |||| |||||| |||||||  |||  ||||||||||||||||||||||| |||||||||||    
T  19154769 ctacaccaaggatcaactcgtaacatctcgtgcgacaaagatcgcaaaaccctaaacaagc 19154709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 213
Target Start/End: Complemental strand, 21918815 - 21918745
Alignment:
Q  151 ctaggtcactcgcgaggcgaga-------ctcgccatggcgagttcaggtcagattccca-aagtttcatt 213  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||| ||||| ||||||||||    
T  21918815 ctaggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttcatt 21918745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 140
Target Start/End: Complemental strand, 17439389 - 17439330
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    ||||||||||| |||||||  ||   ||||||||||||||||||||||| ||||||||||    
T  17439389 ctaccccaaggatcaactcataatatctcgtgcgacaaagatcgcaaaaacctaaacaag 17439330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 140
Target Start/End: Original strand, 22525753 - 22525812
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    ||||||||| | |||||||  |||  ||||||||||||||||||||||| ||||||||||    
T  22525753 ctaccccaatgatcaactcataacatctcgtgcgacaaagatcgcaaaaccctaaacaag 22525812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 239
Target Start/End: Complemental strand, 26355484 - 26355417
Alignment:
Q  172 actcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctca 239  Q
    |||||||||||| |||||||||   |||| ||||  ||||||||||| ||| ||||||||||||||||    
T  26355484 actcgccatggcaagttcaggtacaattcacaaaaattcattctaaagtctttccaggttcaatctca 26355417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 129
Target Start/End: Original strand, 7373009 - 7373055
Alignment:
Q  83 accccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaa 129  Q
    ||||||| |||||||||||||| |||||||| |||||| ||||||||    
T  7373009 accccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaa 7373055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 25362926 - 25362884
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattccca-aagtttcattc 214  Q
    ||||||||||||||||||||||||| ||||| |||||||||||    
T  25362926 ctcgccatggcgagttcaggtcagaatcccacaagtttcattc 25362884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 17141250 - 17141325
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattccc-aaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||||||||||||| |||| ||||| | ||| |||||||||||  ||| | ||||||||||||||||||||||||    
T  17141250 ctcgccatggcgagttc-ggtctgattctctaaattttcattctaag-tcttttcaggttcaatctcattctacattc 17141325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 21249718 - 21249793
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattc-ccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||||||||||||| |||||||||| ||||| ||||||||  || ||| |||||||||| |||||| ||||||||    
T  21249718 ctcgccatggcgagttc-ggtcagattctccaaattttcattc-caagtctttccaggttcagtctcatcctacattc 21249793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 28648829 - 28648753
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattcccaaag-tttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||| |||||||||||||||| | | | |||| |||||||||||| ||| |||| |||||||||||| ||||||||    
T  28648829 ctcgccgtggcgagttcaggtcaaaattcaaaaggtttcattctaaa-tctttccatgttcaatctcatcctacattc 28648753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 134; Significance: 7e-70; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 433244 - 433419
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------c 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||       |    
T  433244 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttgcaactgggtcactcgcgaggcgagagcctctgc 433343  T
Q  174 tcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  433344 tcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctttccaggttcaatctcattctacattc 433419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 81 - 249
Target Start/End: Complemental strand, 50210097 - 50209922
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------c 173  Q
    |||||| ||||||||||||||||| |||||||| |||||| ||||||||||||||  | ||| | | |  || |||||||||||||||||||       |    
T  50210097 ctacccaaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgc 50209998  T
Q  174 tcgccatggcgagttcaggtcaga-ttcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||| |||||||||||||||||| |||| |||||||||||||||| ||| ||||||||||||||||||||||||||    
T  50209997 tcgccgtggcgagttcaggtcagaattccaaaagtttcattctaaa-tctttccaggttcaatctcattctacattc 50209922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 83 - 167
Target Start/End: Original strand, 16758890 - 16758974
Alignment:
Q  83 accccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgagg 167  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| | ||||||||  ||||||||||    
T  16758890 accccaaggttcaactctcaacaactcgtgcgacaaagatcgcaaaatcctaaacgagcattctgtaactaggcaactcgcgagg 16758974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 34510017 - 34510192
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattttttaactaggtcactcgcgaggcgaga------- 172  Q
    ||||||||||||||||| |||||| |||||||| |||||| |||||||| ||||| || | || | | |  || ||||||||| |||||||||           
T  34510017 ctaccccaaggttcaaccctcaacaactcgtgcaacaaaggtcgcaaaaacctaa-catgacactctgtttctgggtcactcgtgaggcgagagcctctg 34510115  T
Q  173 ctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||| |||||||||||||||||||| |||||  ||||||||| ||||| ||||||||||||||||| ||||||||    
T  34510116 ctcgccgtggcgagttcaggtcagatttccaaaagttcattctacaatctttccaggttcaatctcatcctacattc 34510192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 172 - 245
Target Start/End: Complemental strand, 22354359 - 22354285
Alignment:
Q  172 actcgccatggcgagttcaggtcagattccca-aagtttcattctaaaatctatccaggttcaatctcattctac 245  Q
    ||||||| |||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||| ||||    
T  22354359 actcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctatccaggttcaatctcatcctac 22354285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 83 - 144
Target Start/End: Original strand, 21342332 - 21342393
Alignment:
Q  83 accccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 144  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||    
T  21342332 accccaaggttcaactctcaacaactcgtgcgacaacgatcgcaaaaacctaaacaagcatt 21342393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 83 - 144
Target Start/End: Original strand, 21347197 - 21347258
Alignment:
Q  83 accccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 144  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||    
T  21347197 accccaaggttcaactctcaacaactcgtgcgacaacgatcgcaaaaacctaaacaagcatt 21347258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 22532506 - 22532681
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattttttaactaggtcactcgcgaggcgaga------- 172  Q
    ||||| ||||||||||||||||||  ||||||| |||||| |||||||||||||| |||| || | | |   | |||||||||||||||||||           
T  22532506 ctacctcaaggttcaactctcaacagctcgtgcaacaaaggtcgcaaaatcctaa-caagtcactctgtttttgggtcactcgcgaggcgagagcctctg 22532604  T
Q  173 ctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||| || ||||||||||| |||||||| |||||  ||||||||| ||||  ||||||||||||||||| ||||||||    
T  22532605 ctcaccgtggcgagttcaagtcagatttccaaaagttcattctacaatccttccaggttcaatctcatcctacattc 22532681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 171
Target Start/End: Complemental strand, 35260964 - 35260873
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaa-gcattttttaactaggtcactcgcgaggcgag 171  Q
    ||||||||| |||||||||  |||  ||||||||||||||||||||||||||||| ||| | ||||| ||||| ||  ||||||||||||||    
T  35260964 ctaccccaatgttcaactcataacatctcgtgcgacaaagatcgcaaaatcctaagcaaggtattttgtaactgggaaactcgcgaggcgag 35260873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 243
Target Start/End: Original strand, 33681345 - 33681415
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattct 243  Q
    |||||||||||||||||||||   | || ||||  ||||||||||||||| ||||||||||||||||||||    
T  33681345 ctcgccatggcgagttcaggtgcaactcacaaaaattcattctaaaatctttccaggttcaatctcattct 33681415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 243
Target Start/End: Original strand, 20248612 - 20248683
Alignment:
Q  172 actcgccatggcgagttcaggt-cagattcccaaagtttcattctaaaatctatccaggttcaatctcattct 243  Q
    |||||||||||||||||||||| ||| ||| ||||  ||||||||||| ||| ||||||||||||||||||||    
T  20248612 actcgccatggcgagttcaggttcag-ttcacaaaaattcattctaaagtctctccaggttcaatctcattct 20248683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 141
Target Start/End: Original strand, 20346041 - 20346101
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagc 141  Q
    ||||||||||| | |||||  |||  ||||||||||||||||||||||| |||||||||||    
T  20346041 ctaccccaaggattaactcataacatctcgtgcgacaaagatcgcaaaaccctaaacaagc 20346101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 172
Target Start/End: Original strand, 26065176 - 26065268
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaa-gcattttttaactaggtcactcgcgaggcgaga 172  Q
    ||||||||||| | |||||  |||  ||||||||||||||||||||||| ||||||||| | ||| | ||||| ||  |||||||||||||||    
T  26065176 ctaccccaaggataaactcataacatctcgtgcgacaaagatcgcaaaaccctaaacaaggtattctgtaactgggcaactcgcgaggcgaga 26065268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 140
Target Start/End: Complemental strand, 27653106 - 27653047
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    ||||||||||| |||||||  |||  ||||||| ||||||||||||||| ||||||||||    
T  27653106 ctaccccaaggatcaactcataacatctcgtgcaacaaagatcgcaaaaccctaaacaag 27653047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 140
Target Start/End: Complemental strand, 52940761 - 52940702
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    ||||||||||| |||||||  |||  ||||||||||||||||||||||| |||| |||||    
T  52940761 ctaccccaaggatcaactcataacatctcgtgcgacaaagatcgcaaaaacctatacaag 52940702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 20918938 - 20919013
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattc-ccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||||||||||||||| |||||||| ||||| ||  |||||||  ||| | ||||||||||||||||||||||||    
T  20918938 ctcgccatggcgagttcag-tcagattctccaaatttaaattctaag-tcttttcaggttcaatctcattctacattc 20919013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 130
Target Start/End: Complemental strand, 27250613 - 27250564
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaat 130  Q
    |||||| |||||||||||||| || |||||||| |||||| |||||||||    
T  27250613 ctacccaaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaat 27250564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 126; Significance: 4e-65; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 81 - 249
Target Start/End: Complemental strand, 36154712 - 36154537
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgag-------ac 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||       ||    
T  36154712 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattctgtaaataggtcactcgcgaggcgagagcctctac 36154613  T
Q  174 tcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||    
T  36154612 tcgccatggcgagttcaggtcagattctcaaagttttattctaaaatctatccaggttcaatctcactctacattc 36154537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 81 - 249
Target Start/End: Complemental strand, 11581129 - 11580954
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------c 173  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||| | |||||||||||||||||||       |    
T  11581129 ctaccccaaggttcaactctcaacgactcgtacgacaaagatcgcaaaatcctaaacaagcattctgtaaatgggtcactcgcgaggcgagagcctctgc 11581030  T
Q  174 tcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  11581029 tcgccatggcgagttcaggtcagattctcaaagttttattctaaaatctatccaggttcaatctcattctacattc 11580954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 86 - 244
Target Start/End: Original strand, 22144292 - 22144457
Alignment:
Q  86 ccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgag-------actcgcc 178  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||| ||  ||||||||||||||       ||||||     
T  22144292 ccaaggttcaactctcaacaactcgtgcgacaaagatcgcaaaatcctaaacaagcattctgtaactgggcaactcgcgaggcgagagcctctactcgct 22144391  T
Q  179 atggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattcta 244  Q
    |||||||||||||||   | |||||||  | |||||| ||||   |||||||||||||||| ||||    
T  22144392 atggcgagttcaggtgtaactcccaaaaatccattcttaaattattccaggttcaatctcaatcta 22144457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 13095731 - 13095906
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattttttaactaggtcactcgcgaggcgag-------a 172  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||| ||| |||||| || | | |  |||||||||||||||||||||            
T  13095731 ctaccccaaggttcaactctcaacgactcgtgcaacaaaggtcgcaaaaacct-aacaagtcactctgtttctaggtcactcgcgaggcgagggcctctg 13095829  T
Q  173 ctcgccatggcgagttcaggtcagattccca-aagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||  |||||||||||||||||| ||||| |||||||||||| |||||| ||||||| ||||||||| ||||||||    
T  13095830 ctcgctgtggcgagttcaggtcagaatcccacaagtttcattct-aaatctttccaggtccaatctcatcctacattc 13095906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 249
Target Start/End: Complemental strand, 21986031 - 21985856
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattttttaactaggtcactcgcgaggcgaga------- 172  Q
    |||||||||||||||||||||||| |||||||| |||||| |||||||| ||||| |||| || | | |  || ||||||||||||||||||            
T  21986031 ctaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaa-caagacactctgtttctgggtcactcgcgaggcgagggcctctg 21985933  T
Q  173 ctcgccatggcgagttcaggtcaga-ttcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    || ||| |||||||||||||||||| |||| |||||||||||||||| ||| ||||||||||||||||||||||||||    
T  21985932 cttgccgtggcgagttcaggtcagaattccaaaagtttcattctaaa-tctttccaggttcaatctcattctacattc 21985856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 1096704 - 1096879
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------c 173  Q
    |||||||||||| ||||| | ||| ||| |||||||| |||||||||||| ||||| | ||||| | |  || |||||||||||||||||||       |    
T  1096704 ctaccccaaggtccaacttttaacaacttgtgcgacagagatcgcaaaattctaaaaaggcattctgtttctgggtcactcgcgaggcgagagcctctac 1096803  T
Q  174 tcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||| |||||||||||||||||||| |||||  ||||||||  ||||| ||||| ||||||||||| ||||||||    
T  1096804 tcgccgtggcgagttcaggtcagatttccaaaagttcattctgcaatctttccagattcaatctcatcctacattc 1096879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 248
Target Start/End: Original strand, 9078189 - 9078363
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------c 173  Q
    ||||||||||||||||| || ||| ||| |||||||| |||||||||||||||||  | ||| | | |  || |||||||||||||||||||       |    
T  9078189 ctaccccaaggttcaacccttaacaacttgtgcgacacagatcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgc 9078288  T
Q  174 tcgccatggcgagttcaggtcagattcccaaag-tttcattctaaaatctatccaggttcaatctcattctacatt 248  Q
    ||||| |||||||||||||||||| | | |||| |||||||||||| ||| |||||||||||||||||||||||||    
T  9078289 tcgccgtggcgagttcaggtcagaattcaaaaggtttcattctaaa-tctttccaggttcaatctcattctacatt 9078363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 240
Target Start/End: Original strand, 25421769 - 25421935
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgag-------ac 173  Q
    |||||||||||||||||||||||| |||||||| |||||| ||||||||||||||  | ||| |   |  |||||||||||||||||||||       ||    
T  25421769 ctaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactcggtttctaggtcactcgcgaggcgagagcctctac 25421868  T
Q  174 tcgccatggcgagttcaggtcaga-ttcccaaagtttcattctaaaatctatccaggttcaatctcat 240  Q
    ||||| ||||||||||| |||||| |||| ||||||||||||| |||||| ||||||| |||||||||    
T  25421869 tcgccgtggcgagttcaagtcagatttccgaaagtttcattct-aaatctttccaggtccaatctcat 25421935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 172 - 249
Target Start/End: Complemental strand, 23390283 - 23390205
Alignment:
Q  172 actcgccatggcgagttcaggtcagattccca-aagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||| ||||| ||||||||||||||||| ||||||||    
T  23390283 actcgccatggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattc 23390205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 13025547 - 13025722
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattttttaactaggtcactcgcgaggcgaga------- 172  Q
    |||||||||||||||||||||||| | |||||| |||||| |||||||| ||||| |||| || | | |  |||||||||||||||||||||            
T  13025547 ctaccccaaggttcaactctcaacaaatcgtgcaacaaaggtcgcaaaaacctaa-caagtcactctgtttctaggtcactcgcgaggcgagggcctttg 13025645  T
Q  173 ctcgccatggcgagttcaggtcagattccca-aagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||  |||||||||||||||||| ||||| |||||||||||| |||||| ||||||| ||||||||| ||||||||    
T  13025646 ctcgctgtggcgagttcaggtcagaatcccacaagtttcattct-aaatctttccaggtccaatctcatcctacattc 13025722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 24529457 - 24529633
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttt-taactaggtcactcgcgaggcgaga------- 172  Q
    |||||||||||||||||||||||| ||| |||| |||||| |||||||| ||||| ||||  | | | |  || |||||||||||||||||||           
T  24529457 ctaccccaaggttcaactctcaactactagtgcaacaaaggtcgcaaaaacctaa-caagactctctgtttctgggtcactcgcgaggcgagagcctctg 24529555  T
Q  173 ctcgccatggcgagttcaggtcaga-ttcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||| |||||||||||| ||||| |||| |||||||||||||| || || ||||||||||||||||| ||||||||    
T  24529556 ctcgccgtggcgagttcagatcagaattccaaaagtttcattctacaacctttccaggttcaatctcatcctacattc 24529633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 24493805 - 24493980
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattttttaactaggtcactcgcgaggcgaga------- 172  Q
    |||||||||||||||||||||||| |||||||| |||||| |||||||| ||||| |||| || | | |   | ||| |||| |||||||| |           
T  24493805 ctaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaa-caagacactctgtttatgggttactcacgaggcgaaagcctctg 24493903  T
Q  173 ctcgccatggcgagttcaggtcagattcccaaa-gtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||| |||||||||||||||||| ||| ||| ||||||||||||| ||| ||||||||||||||||| ||||||||    
T  24493904 ctcgccgtggcgagttcaggtcagaatccaaaaagtttcattctaaa-tctttccaggttcaatctcatcctacattc 24493980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 25431631 - 25431806
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgag-------ac 173  Q
    ||||| |||||||||||||||||| |||||||  |||||| ||||||||||||||  | ||| |   |  || |||||||||||||| |||       ||    
T  25431631 ctacctcaaggttcaactctcaacaactcgtgtaacaaaggtcgcaaaatcctaacaaggcactcgatttctgggtcactcgcgaggtgagagcctctac 25431730  T
Q  174 tcgccatggcgagttcaggtcaga-ttcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||| ||||||||||| |||||| |||| ||||||||||||| |||||| ||||||| ||||||||| ||| ||||    
T  25431731 tcgccgtggcgagttcaagtcagatttccaaaagtttcattct-aaatctttccaggtccaatctcatcctaaattc 25431806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 22119977 - 22119902
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattc-ccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||  ||| ||||||||||||||||| ||||||||    
T  22119977 ctcgccatggcgagttcag-tcagattctccaaagtttcattctaag-tctttccaggttcaatctcatcctacattc 22119902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 243
Target Start/End: Original strand, 21565880 - 21565950
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattct 243  Q
    |||||||||||||||||||||   |||| | ||  ||||||||||||||| ||||||||||||||||||||    
T  21565880 ctcgccatggcgagttcaggtacaattcacgaaaattcattctaaaatctttccaggttcaatctcattct 21565950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 243
Target Start/End: Complemental strand, 22959319 - 22959248
Alignment:
Q  172 actcgccatggcgagttcaggt-cagattcccaaagtttcattctaaaatctatccaggttcaatctcattct 243  Q
    |||||||||||||||||||||| ||| ||| ||||  ||||||||||| ||| ||||||||||||||||||||    
T  22959319 actcgccatggcgagttcaggttcag-ttcacaaaaattcattctaaagtctctccaggttcaatctcattct 22959248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 246
Target Start/End: Complemental strand, 21871357 - 21871283
Alignment:
Q  172 actcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctaca 246  Q
    |||||||||||||||| ||||||||| || ||||  | ||||| | ||||| ||||||||||||||||| |||||    
T  21871357 actcgccatggcgagtacaggtcagaatcacaaaagtccattccataatctttccaggttcaatctcatcctaca 21871283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 246
Target Start/End: Complemental strand, 21875637 - 21875563
Alignment:
Q  172 actcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctaca 246  Q
    |||||||||||||||| ||||||||| || ||||  | ||||| | ||||| ||||||||||||||||| |||||    
T  21875637 actcgccatggcgagtacaggtcagaatcacaaaagtccattccataatctttccaggttcaatctcatcctaca 21875563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 24767121 - 24767046
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattc-ccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||||| ||||||||| |||||||| |||||||||||||||||  ||| ||||| ||||||||||| ||||||||    
T  24767121 ctcgccatgacgagttcag-tcagattctccaaagtttcattctaag-tctttccagattcaatctcatcctacattc 24767046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 140
Target Start/End: Complemental strand, 25574353 - 25574294
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    ||||||||||| |||||||  |||  | ||||||||||||||||||||| ||||||||||    
T  25574353 ctaccccaaggatcaactcataacctcacgtgcgacaaagatcgcaaaaccctaaacaag 25574294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 140
Target Start/End: Complemental strand, 25575546 - 25575487
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    ||||||||||| |||||||  |||  | ||||||||||||||||||||| ||||||||||    
T  25575546 ctaccccaaggatcaactcataacctcacgtgcgacaaagatcgcaaaaccctaaacaag 25575487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 140
Target Start/End: Complemental strand, 25576739 - 25576680
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    ||||||||||| |||||||  |||  | ||||||||||||||||||||| ||||||||||    
T  25576739 ctaccccaaggatcaactcataacctcacgtgcgacaaagatcgcaaaaccctaaacaag 25576680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 26740530 - 26740476
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 135  Q
    ||||||||||| ||||||| ||||  ||| ||||||||||||||||||| |||||    
T  26740530 ctaccccaaggatcaactcacaacatctcttgcgacaaagatcgcaaaaccctaa 26740476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 140
Target Start/End: Complemental strand, 21328072 - 21328039
Alignment:
Q  107 ctcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    ||||||||||||||||||||||| ||||||||||    
T  21328072 ctcgtgcgacaaagatcgcaaaaccctaaacaag 21328039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 126
Target Start/End: Complemental strand, 22120074 - 22120033
Alignment:
Q  85 cccaaggttcaactctcaacgactcgtgcgacaaagatcgca 126  Q
    |||||||||||||||  ||| |||||||||||||||||||||    
T  22120074 cccaaggttcaactcataacaactcgtgcgacaaagatcgca 22120033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 126; Significance: 4e-65; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 81 - 249
Target Start/End: Complemental strand, 44928807 - 44928632
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------c 173  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||       |    
T  44928807 ctaccacaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattctgtaactgggtcactcgcgaggcgagagcctctgc 44928708  T
Q  174 tcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  44928707 tcgccatggcgagttctggtcagattcccaaagtttcattctaaaatctttccaggttcaatctcattctacattc 44928632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 85 - 249
Target Start/End: Original strand, 44102451 - 44102622
Alignment:
Q  85 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------ctcgc 177  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| | ||| |||||||||||||||||||||       |||||    
T  44102451 cccaaggttcaactctcaacgactcgtgctacaaagatcgcaaaatcctaaacaagtattctgtaaataggtcactcgcgaggcgagagcctctgctcgc 44102550  T
Q  178 catggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||    
T  44102551 catggcgagttcaggtcagattctcaaagttttattctaaaatctatccaggttcaatctcatcctacattc 44102622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 14038885 - 14039061
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------c 173  Q
    |||||||||||||||||||| | | ||| |||||||| |||||||||||||||||  | ||| | | |  || |||||||||||||||||||       |    
T  14038885 ctaccccaaggttcaactcttagcaacttgtgcgacacagatcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgc 14038984  T
Q  174 tcgccatggcgagttcaggtcagattcccaaa-gtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||| |||||||||| ||||||||| ||||| ||||||||||||||||| || |||||||||||||||||||||||    
T  14038985 tcgccgtggcgagttctggtcagatttccaaaagtttcattctaaaatctttctaggttcaatctcattctacattc 14039061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 15091133 - 15091309
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------c 173  Q
    |||||||||||||||||||| |   ||| |||||||| |||||||||||||||||  | ||| | | |  || |||||||||||||||||||       |    
T  15091133 ctaccccaaggttcaactcttagaaacttgtgcgacacagatcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgc 15091232  T
Q  174 tcgccatggcgagttcaggtcagattcccaaa-gtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||| |||||||||||||||||||| ||||| ||||||||||||||||  ||||||||||||||||||||||||||    
T  15091233 tcgccgtggcgagttcaggtcagatttccaaaagtttcattctaaaatccttccaggttcaatctcattctacattc 15091309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 172
Target Start/End: Complemental strand, 52243077 - 52242986
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga 172  Q
    ||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||| | ||||| ||  |||||||||||||||    
T  52243077 ctaccccaaagttcaactctttacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattctgtaactgggcaactcgcgaggcgaga 52242986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 85 - 244
Target Start/End: Complemental strand, 21815511 - 21815346
Alignment:
Q  85 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgag-------actcgc 177  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||  || | ||| | ||  ||||||||||||||       ||||||    
T  21815511 cccaaggttcaactctcaacgactcgtgcgatgaagatcgcaaaatcctaaacaaggcttctgtaattgggcaactcgcgaggcgagagcctctactcgc 21815412  T
Q  178 catggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattcta 244  Q
    ||||||||||||||||||| |||| |||  ||||||||  |||  ||||||||||| | ||||||||    
T  21815411 catggcgagttcaggtcagcttccaaaaagttcattct-taattaatccaggttcattatcattcta 21815346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 85 - 249
Target Start/End: Original strand, 44053070 - 44053241
Alignment:
Q  85 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------ctcgc 177  Q
    ||||||||||||||||| || |||||||| |||||| |||||||||| |||  | ||| | | |  || |||||||||||||||||||       |||||    
T  44053070 cccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatc-taacaaggcactctgtttctgggtcactcgcgaggcgagagtctctgctcgc 44053168  T
Q  178 catggcgagttcaggtcagattccca-aagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    | |||||||||||||||||| ||||| ||||||||| ||| ||||| | ||||||||||||||| ||||||||    
T  44053169 cgtggcgagttcaggtcagaatcccacaagtttcatcctataatctttacaggttcaatctcatcctacattc 44053241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 81 - 248
Target Start/End: Complemental strand, 16377407 - 16377232
Alignment:
Q  81 ctaccccaaggttcaactctca-acgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga------- 172  Q
    |||||||||||||||||||||| |  |||||||| |||||| | ||||||||||||  | ||| | | |  || ||||||||| |||||||||           
T  16377407 ctaccccaaggttcaactctcataaaactcgtgcaacaaaggtagcaaaatcctaacaaggcactatgtttctgggtcactcgtgaggcgagagcctctg 16377308  T
Q  173 ctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacatt 248  Q
    |||||| ||||||||||||||||||||||||||  |||||||||  |||  ||||||||||||||||| |||||||    
T  16377307 ctcgccgtggcgagttcaggtcagattcccaaaagttcattctacgatcattccaggttcaatctcatcctacatt 16377232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 94 - 249
Target Start/End: Complemental strand, 21815173 - 21815012
Alignment:
Q  94 caactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgag-------actcgccatggcgag 186  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||  || | ||| | ||  ||||||||||||||       |||||||||||||||    
T  21815173 caactctcaacgactcgtgcgatgaagatcgcaaaatcctaaacaaggcttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgag 21815074  T
Q  187 ttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||| ||||| |||| |||  ||||||||  |||  ||||||||||| | |||||||| ||||    
T  21815073 ttcaagtcagcttccaaaaagttcattct-taattaatccaggttcattatcattctaaattc 21815012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 94 - 249
Target Start/End: Complemental strand, 21818595 - 21818434
Alignment:
Q  94 caactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgag-------actcgccatggcgag 186  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||  || | ||| | ||  ||||||||||||||       |||||||||||||||    
T  21818595 caactctcaacgactcgtgcgatgaagatcgcaaaatcctaaacaaggcttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgag 21818496  T
Q  187 ttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||| ||||| |||| |||  ||||||||  |||  ||||||||||| | |||||||| ||||    
T  21818495 ttcaagtcagcttccaaaaagttcattct-taattaatccaggttcattatcattctaaattc 21818434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 22636671 - 22636846
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattttttaactaggtcactcgcgaggcgaga------- 172  Q
    |||||||||||||||| ||||||| |||||||| |||||| |||||||| ||||| |||| || | | |  || ||||||||| |||||||||           
T  22636671 ctaccccaaggttcaattctcaacaactcgtgcaacaaaggtcgcaaaa-cctaa-caagacactctgtttctgggtcactcgtgaggcgagagcctctg 22636768  T
Q  173 ctcgccatggcgagttcaggtcagattccca-aagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||| ||||||| ||| |||||| ||||| ||||||||||||| ||| | ||||||||||||||||| ||||||||    
T  22636769 ctcgccgtggcgaggtcaagtcagaatcccacaagtttcattctacaatttttccaggttcaatctcatcctacattc 22636846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 24029078 - 24029153
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattc-ccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||  ||| ||||||||||||||||| ||||||||    
T  24029078 ctcgccatggcgagttcag-tcagattctccaaagtttcattctaag-tctttccaggttcaatctcatcctacattc 24029153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 172
Target Start/End: Complemental strand, 15464814 - 15464722
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattttttaactaggtcactcgcgaggcgaga 172  Q
    |||| ||||||||||||||  ||| ||| ||||||||||||| ||||||||||||||||| |||| | ||||| ||  |||||||||||||||    
T  15464814 ctactccaaggttcaactcataacaacttgtgcgacaaagattgcaaaatcctaaacaagtcattctgtaactgggcaactcgcgaggcgaga 15464722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 181 - 248
Target Start/End: Complemental strand, 16239769 - 16239703
Alignment:
Q  181 ggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacatt 248  Q
    ||||||||||||| ||| |||  ||||||||||||||| ||| |||||||||||||||||||||||||    
T  16239769 ggcgagttcaggttagaatccacaagtttcattctaaa-tctttccaggttcaatctcattctacatt 16239703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 249
Target Start/End: Original strand, 16596981 - 16597057
Alignment:
Q  172 actcgccatggcgagttcaggtcagattccc-aaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||||||||||||||| |||||||||| | ||| |||||||||||  ||| ||||||||||||||||||||||||||    
T  16596981 actcgccatggcgagttc-ggtcagattctctaaattttcattctaag-tctttccaggttcaatctcattctacattc 16597057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 7799032 - 7799108
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattccca-aagtttcattctaaaatctatccaggttcaatctcattctacatt 248  Q
    |||||| |||||||||||||||||| | | | ||||||||||||| || || ||||||||||||||||| |||||||    
T  7799032 ctcgccgtggcgagttcaggtcagaatactacaagtttcattctacaaactttccaggttcaatctcatcctacatt 7799108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 13812593 - 13812519
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattc-ccaaagtttcattctaaaatctatccaggttcaatctcattctacatt 248  Q
    |||||||||||||||| || |||||||| |||||||||||||||||  ||| ||||||||||||||||| |||||||    
T  13812593 ctcgccatggcgagtttag-tcagattctccaaagtttcattctaag-tctttccaggttcaatctcatcctacatt 13812519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 239
Target Start/End: Original strand, 3332222 - 3332287
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattc-ccaaagtttcattctaaaatctatccaggttcaatctca 239  Q
    |||||||||||||||||| ||||||||| ||||||||||||||| || ||| ||||||||||||||||    
T  3332222 ctcgccatggcgagttca-gtcagattctccaaagtttcattct-aagtctttccaggttcaatctca 3332287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 140
Target Start/End: Original strand, 17333517 - 17333576
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    ||||||||||| |||||||  |||  ||||||||||||||||||||||| ||||||||||    
T  17333517 ctaccccaaggatcaactcataacatctcgtgcgacaaagatcgcaaaaccctaaacaag 17333576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 188 - 249
Target Start/End: Original strand, 6190783 - 6190845
Alignment:
Q  188 tcaggtcagattccca-aagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||||| | ||||| ||||||||||||| ||||| ||||||||||||||||| ||||||||    
T  6190783 tcaggtcaaaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattc 6190845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 15868585 - 15868531
Alignment:
Q  90 ggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 144  Q
    ||||||||||  ||| ||||| |||||||||||||||||| ||||||||||||||    
T  15868585 ggttcaactcataacaactcgcgcgacaaagatcgcaaaaacctaaacaagcatt 15868531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 16239854 - 16239800
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 135  Q
    ||||||||| |||||||||||||| |||||||| |||||| |||||||| |||||    
T  16239854 ctaccccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaa 16239800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 214
Target Start/End: Original strand, 3096880 - 3097020
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattttttaactaggtcactcgcgaggcgaga------- 172  Q
    |||||| |||||||||||||| || |||||||| |||||| ||||||||||   |||||| || | | |  || |||||||||||||||||||           
T  3096880 ctacccaaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatc--taacaagtcactctgtttctgggtcactcgcgaggcgagagcctctg 3096977  T
Q  173 ctcgccatggcgagttcaggtcagattccca-aagtttcattc 214  Q
    |||||| |||||||||||||||||| ||||| |||||||||||    
T  3096978 ctcgccttggcgagttcaggtcagaatcccacaagtttcattc 3097020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 208 - 243
Target Start/End: Original strand, 8846746 - 8846781
Alignment:
Q  208 ttcattctaaaatctatccaggttcaatctcattct 243  Q
    ||||||||||||||| ||||||||||||||||||||    
T  8846746 ttcattctaaaatctttccaggttcaatctcattct 8846781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 214
Target Start/End: Original strand, 12902994 - 12903134
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgag-------ac 173  Q
    |||||| |||||||||||||||||  ||||||| |||||| ||||||||| ||||  | ||| | | |  || |||||||||||||||| |       ||    
T  12902994 ctacccaaaggttcaactctcaacagctcgtgcaacaaaggtcgcaaaat-ctaacaaggcactctgtttctgggtcactcgcgaggcgggagcctctac 12903092  T
Q  174 tcgccatggcgagttcaggtcagattccca-aagtttcattc 214  Q
    ||||| |||||||||||||||||| ||||| |||||||||||    
T  12903093 tcgccgtggcgagttcaggtcagaatcccacaagtttcattc 12903134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 128
Target Start/End: Complemental strand, 17047956 - 17047909
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaa 128  Q
    |||||| ||||||||||||||||| |||||||| |||||| |||||||    
T  17047956 ctacccaaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaa 17047909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 7089212 - 7089254
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattccca-aagtttcattc 214  Q
    ||||||||||||||||||||||||| ||||| |||||||||||    
T  7089212 ctcgccatggcgagttcaggtcagaatcccataagtttcattc 7089254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 17047858 - 17047816
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattccca-aagtttcattc 214  Q
    ||||||||||||||||||||||||| ||||| |||||||||||    
T  17047858 ctcgccatggcgagttcaggtcagaatcccacaagtttcattc 17047816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 140
Target Start/End: Complemental strand, 14852733 - 14852700
Alignment:
Q  107 ctcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    ||||||||||||||||||||||| ||||||||||    
T  14852733 ctcgtgcgacaaagatcgcaaaaccctaaacaag 14852700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 16043249 - 16043294
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgca 126  Q
    ||||||||||| ||||||| | || |||||||||||||||||||||    
T  16043249 ctaccccaaggatcaactcaccacaactcgtgcgacaaagatcgca 16043294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 126
Target Start/End: Complemental strand, 20157171 - 20157130
Alignment:
Q  85 cccaaggttcaactctcaacgactcgtgcgacaaagatcgca 126  Q
    |||||||||||||||  ||| |||||||||||||||||||||    
T  20157171 cccaaggttcaactcataacaactcgtgcgacaaagatcgca 20157130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 22633997 - 22633922
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattc-ccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||||||||||||||  || ||||  |||||||||||||||||  ||| ||||||||||||||||| ||||||||    
T  22633997 ctcgccatggcgagttcaa-tctgattatccaaagtttcattctaag-tctttccaggttcaatctcatcctacattc 22633922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 126
Target Start/End: Original strand, 24028981 - 24029022
Alignment:
Q  85 cccaaggttcaactctcaacgactcgtgcgacaaagatcgca 126  Q
    |||||||||||||||  ||| |||||||||||||||||||||    
T  24028981 cccaaggttcaactcataacaactcgtgcgacaaagatcgca 24029022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 14825705 - 14825761
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaac 137  Q
    ||||||||||| |||||||  |||  |||||||||||| |||||||||| |||||||    
T  14825705 ctaccccaaggatcaactcataacatctcgtgcgacaaggatcgcaaaaccctaaac 14825761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 124; Significance: 7e-64; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 83 - 249
Target Start/End: Complemental strand, 17248168 - 17247995
Alignment:
Q  83 accccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------ctc 175  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||| |||||||||||||||||||       |||    
T  17248168 accccaaggtttaactctcaacgactcgtgcgacaaagatcgcaaaattctaaacaagcattctgtaactgggtcactcgcgaggcgagagcctctgctc 17248069  T
Q  176 gccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  17248068 gccatggcgagttcaggtcagattcccaaagtttcattctaaaatctttccaggttcaatctcattctacattc 17247995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 81 - 249
Target Start/End: Complemental strand, 53070582 - 53070408
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgag-------ac 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || | ||| | ||  ||||||||||||||       ||    
T  53070582 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaaggcttctgtaattgggcaactcgcgaggcgagagcctctac 53070483  T
Q  174 tcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||||||||||||||||||| |||| |||  ||||||||  |||  |||||||||||||||||||||||||||    
T  53070482 tcgccatggcgagttcaggtcagcttccaaaaagttcattct-taattaatccaggttcaatctcattctacattc 53070408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 81 - 249
Target Start/End: Complemental strand, 25476269 - 25476094
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------c 173  Q
    ||||| |||||||||||||||||| |||||||| |||||| ||||||||||||||  | ||| | | |  || |||||||||||||||||||       |    
T  25476269 ctacctcaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctac 25476170  T
Q  174 tcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||| | |||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||    
T  25476169 tcgtcgtggcgagttcaggtcagattccaaaagtttcattctaaaatctttccaggttcgatctcattctacattc 25476094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 14572825 - 14573000
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------c 173  Q
    |||||||||||||||||||||||| |||||||| |||||| |||||||| |||||  | | | | | |  ||||||||||||||||||||||       |    
T  14572825 ctaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaacaaggtactctgtttctaggtcactcgcgaggcgagagcctctac 14572924  T
Q  174 tcgccatggcgagttcaggtcagattcccaaa-gtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||||||||||||||||||||||| ||||| |||||||||| || ||| ||||||||||||||||||||||||||    
T  14572925 tcgccatggcgagttcaggtcagatttccaaaggtttcattct-aagtctttccaggttcaatctcattctacattc 14573000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 81 - 249
Target Start/End: Complemental strand, 14576717 - 14576542
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgag-------ac 173  Q
    |||||||||||||||||||||||| |||||||| |||||| ||||||||||||||  | ||| ||| |  |||||||||||||||||||||       ||    
T  14576717 ctaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactttgtttctaggtcactcgcgaggcgagagcctctac 14576618  T
Q  174 tcgccatggcgagttcaggtcagattcccaaa-gtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||| ||||| |||||||||||||| ||||| |||||||||| || ||| |||||||||||| |||||||||||||    
T  14576617 tcgccgtggcgtgttcaggtcagatttccaaaggtttcattct-aagtctttccaggttcaatgtcattctacattc 14576542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 81 - 249
Target Start/End: Complemental strand, 40213605 - 40213430
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------c 173  Q
    ||||||||||||| |||||||||| |||||||| |||||| ||||||||||||||  | ||| | | |  || |||||||||||||||||||       |    
T  40213605 ctaccccaaggttaaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgc 40213506  T
Q  174 tcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||| |||||||||||||| |||||||||||  ||||||||| ||||| ||||||||||||||||| ||||||||    
T  40213505 tcgccgtggcgagttcaggttagattcccaaaagttcattctacaatctttccaggttcaatctcatcctacattc 40213430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 248
Target Start/End: Complemental strand, 11424647 - 11424473
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattttttaactaggtcactcgcgaggcgaga------- 172  Q
    ||||||||| |||||||||||||| |||||||| |||||| |||||||| ||||| |||| || | | |  ||||||| ||||||||||||||           
T  11424647 ctaccccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaa-caagacactctgtttctaggtcgctcgcgaggcgagagcctcta 11424549  T
Q  173 ctcgccatggcgagttcaggtcaga-ttcccaaagtttcattctaaaatctatccaggttcaatctcattctacatt 248  Q
    |||||| |||||||||||||||||| |||  |||||||||||||||| ||| |||||||||||||||||||||||||    
T  11424548 ctcgccgtggcgagttcaggtcagagttcaaaaagtttcattctaaa-tctttccaggttcaatctcattctacatt 11424473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 26687124 - 26687299
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattttttaactaggtcactcgcgaggcgaga------- 172  Q
    ||||||||| |||||||||||||||| |||||| |||||| ||| |||| ||||| |||| || | | |  || |||||||||||||||||||           
T  26687124 ctaccccaaagttcaactctcaacgattcgtgcaacaaaggtcgtaaaa-cctaa-caagacactctgtttctgggtcactcgcgaggcgagagcctctg 26687221  T
Q  173 ctcgccatggcgagttcaggtcagattccca-aagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||| |||||||||||||||||| ||||| ||||||||||||| ||||| ||||||||||||||||| ||||||||    
T  26687222 ctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattc 26687299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 81 - 144
Target Start/End: Complemental strand, 52523611 - 52523548
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 144  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  52523611 ctaccccaaagttcaactctcaatgactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 52523548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 91 - 172
Target Start/End: Complemental strand, 2051073 - 2050992
Alignment:
Q  91 gttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga 172  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||| ||  |||| ||||||||||    
T  2051073 gttcaactctcaacaactcatgcgacaaagatcgcaaaatcctaaacaagcattttgtaactgggcaactcacgaggcgaga 2050992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 85 - 248
Target Start/End: Original strand, 13442515 - 13442685
Alignment:
Q  85 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------ctcgc 177  Q
    ||||||||||||||||| || |||||||| |||||| |||||||||| |||  | ||| | | |  || |||||||||||||||||||       |||||    
T  13442515 cccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatc-taacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgctcgc 13442613  T
Q  178 catggcgagttcaggtcagattccca-aagtttcattctaaaatctatccaggttcaatctcattctacatt 248  Q
    | |||| ||||||||||||| ||||| ||||||||||||| ||||| ||||||||||||||||| |||||||    
T  13442614 cgtggcaagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacatt 13442685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 249
Target Start/End: Original strand, 17488097 - 17488269
Alignment:
Q  85 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcatttt-ttaactaggtcactcgcgaggcgaga-------ctcg 176  Q
    ||||||||||||||||| || |||||||| |||||| |||||||||| |||  | ||| | | ||  ||||||||||||||||||||||       ||||    
T  17488097 cccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatc-taacaaggcactctgttttctaggtcactcgcgaggcgagagcctctgctcg 17488195  T
Q  177 ccatggcgagttcaggtcagattccca-aagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    || |||||| ||||||||||| ||| | ||||||||||||| ||||| ||||||||||||||||| ||||||||    
T  17488196 ccgtggcgatttcaggtcagaatcctacaagtttcattctacaatctttccaggttcaatctcatcctacattc 17488269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 18438771 - 18438946
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattttttaactaggtcactcgcgaggcgaga------- 172  Q
    ||||||||||||||||| |||||| |||||||| |||||| |||||||| ||||| |||| || | | |  || |||||||||||||||||||           
T  18438771 ctaccccaaggttcaacactcaacaactcgtgcaacaaaggtcgcaaaaacctaa-caagacactctgtttctgggtcactcgcgaggcgagagcctctg 18438869  T
Q  173 ctcgccatggcgagttcaggtcaga-ttcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||| |||| | ||||||||||| |||| |||||||||||||||| ||| |||||||||||||||||| |||||||    
T  18438870 ctcgccgtggcaacttcaggtcagaattccaaaagtttcattctaaa-tctttccaggttcaatctcattttacattc 18438946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 144
Target Start/End: Original strand, 23274929 - 23274988
Alignment:
Q  85 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 144  Q
    ||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  23274929 cccaaggctcaactctcaacaactcgtgcgacaaagatcgcaaaaacctaaacaagcatt 23274988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 81 - 140
Target Start/End: Original strand, 42386648 - 42386707
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    ||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||    
T  42386648 ctaccccaaggttcaactcacaacaactcgtgcgacaaagttcgcaaaatcctaaacaag 42386707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 14973091 - 14973266
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------c 173  Q
    |||||||||||||||||||| | | ||| |||||||| | |||||||||||||||  | ||| | | |  || ||||||| |||||||||||       |    
T  14973091 ctaccccaaggttcaactcttagcaacttgtgcgacacaaatcgcaaaatcctaacaaggcactctgtttctgggtcacttgcgaggcgagagcctctgc 14973190  T
Q  174 tcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||| |||||||||||||||||| | |||||  ||| ||||||||||| | | |||| |||||||||||||||||    
T  14973191 tcgccgtggcgagttcaggtcagaattccaaaagttctttctaaaatcttttctggtttaatctcattctacattc 14973266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 12934095 - 12934025
Alignment:
Q  173 ctcgccatggcgagttcaggt-cagattcccaaagtttcattctaaaatctatccaggttcaatctcattct 243  Q
    ||||||||||||||||||||| ||| ||| |||| |||||||||||||||| ||||||||||||||||||||    
T  12934095 ctcgccatggcgagttcaggttcag-ttcacaaaatttcattctaaaatctttccaggttcaatctcattct 12934025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 14669097 - 14669172
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattc-ccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||  ||| ||||||||||||||||| ||||||||    
T  14669097 ctcgccatggcgagttcag-tcagattctccaaagtttcattctaag-tctttccaggttcaatctcatcctacattc 14669172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 243
Target Start/End: Original strand, 16097577 - 16097736
Alignment:
Q  93 tcaactctcaacgactcgtgcgacaaagatcgcaaa-atcctaaacaag-cattttttaactaggtcactcgcgaggcgaga-------ctcgccatggc 183  Q
    ||||||| || | |||||||||||||||||||||   | | |||||||| |||||| ||||||| |  ||||||||||||||       ||| |||||||    
T  16097577 tcaactcacatcaactcgtgcgacaaagatcgcatttaacataaacaagacattttgtaactagttagctcgcgaggcgagagcctctactcaccatggc 16097676  T
Q  184 gagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattct 243  Q
    |||||||||||  |||| ||||  ||||||||||||||| | ||||||||||||||||||    
T  16097677 gagttcaggtccaattcacaaaaattcattctaaaatcttttcaggttcaatctcattct 16097736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 85 - 249
Target Start/End: Original strand, 17499579 - 17499751
Alignment:
Q  85 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcatttt-ttaactaggtcactcgcgaggcgaga-------ctcg 176  Q
    ||||||||||||||||| || |||||||| |||||| |||||||||| |||  | ||| | | ||  |||||||||| | |||||||||       |||     
T  17499579 cccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatc-taacaaggcactctgttttctaggtcactagagaggcgagagcctctgctca 17499677  T
Q  177 ccatggcgagttcaggtcagattccca-aagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    || |||||| ||||||||||| ||| | ||||||||||||| ||||| ||||||||||||||||| ||||||||    
T  17499678 ccgtggcgaattcaggtcagaatccaacaagtttcattctacaatctttccaggttcaatctcatcctacattc 17499751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 49667868 - 49667798
Alignment:
Q  173 ctcgccatggcgagttcaggt-cagattcccaaagtttcattctaaaatctatccaggttcaatctcattct 243  Q
    ||||||||||||||||||||| ||| ||| |||  |||||||||||||||| ||||||||||||||||||||    
T  49667868 ctcgccatggcgagttcaggttcag-ttcacaatatttcattctaaaatctttccaggttcaatctcattct 49667798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 12340089 - 12340164
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattc-ccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||||||||||||||| | |||||| |||||||||||||||||  ||| ||||||||||||||||| ||||||||    
T  12340089 ctcgccatggcgagttcagtt-agattctccaaagtttcattctaag-tctttccaggttcaatctcatcctacattc 12340164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 14665942 - 14666017
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattc-ccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||||| |||||||||| |||||||| |||||||||||||||||  ||| ||||||||||||||||| ||||||||    
T  14665942 ctcgccattgcgagttcag-tcagattctccaaagtttcattctaag-tctttccaggttcaatctcatcctacattc 14666017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 14735455 - 14735530
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattc-ccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||||| |||||||||| |||||||| |||||||||||||||||  ||| ||||||||||||||||| ||||||||    
T  14735455 ctcgccattgcgagttcag-tcagattctccaaagtttcattctaag-tctttccaggttcaatctcatcctacattc 14735530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 123
Target Start/End: Original strand, 12339988 - 12340030
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatc 123  Q
    |||||| ||||||||||||||||| ||||||||||||||||||    
T  12339988 ctacccaaaggttcaactctcaacaactcgtgcgacaaagatc 12340030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 235
Target Start/End: Original strand, 43841274 - 43841330
Alignment:
Q  180 tggcgagttcaggtcagattccca-aagtttcattctaaaatctatccaggttcaat 235  Q
    |||||||||||||||||| | ||| ||||||||||||| ||||| ||||||||||||    
T  43841274 tggcgagttcaggtcagaattccacaagtttcattctacaatctttccaggttcaat 43841330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 248
Target Start/End: Complemental strand, 23083245 - 23083071
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattttttaactaggtcactcgcgaggcgaga------- 172  Q
    ||||| |||||||||||||| ||| |||||||| |||||| |||||||| ||||| |||| || | | |  || ||||| |||||||||||||           
T  23083245 ctacctcaaggttcaactctgaacaactcgtgcaacaaaggtcgcaaaa-cctaa-caagacactatgtttctgggtcattcgcgaggcgagagcctcta 23083148  T
Q  173 ctcgccatggcgagttca-ggtcagattcc-caaagtttcattctaaaatctatccaggttcaatctcattctacatt 248  Q
    |||||||||||||||| | ||||||| |||  ||||||||||||| |||||| ||||||| ||||||||| |||||||    
T  23083147 ctcgccatggcgagttaagggtcagaatccaaaaagtttcattct-aaatctttccaggtccaatctcatcctacatt 23083071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 49389428 - 49389359
Alignment:
Q  173 ctcgccatggcgagttcagg-tcagattcccaaagtttcattctaaaatctatccaggttcaatctcattct 243  Q
    |||||||||||||||||||| |||| ||| ||||  ||||||||||| ||| ||||||||||||||||||||    
T  49389428 ctcgccatggcgagttcaggttcag-ttcacaaa-attcattctaaagtctctccaggttcaatctcattct 49389359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 16809735 - 16809777
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattccca-aagtttcattc 214  Q
    ||||||||||||||||||||||||| ||||| |||||||||||    
T  16809735 ctcgccatggcgagttcaggtcagaatcccacaagtttcattc 16809777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 30030076 - 30030126
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatc 131  Q
    |||||| |||||||||||||| || |||||||| |||||| ||||||||||    
T  30030076 ctacccaaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatc 30030126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 12852148 - 12852073
Alignment:
Q  173 ctcgccatggcgagttcaggtcagatt-cccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||||||||||||||| ||||||||  | ||||||||||||| || ||| ||||| ||||||||||| ||||||||    
T  12852148 ctcgccatggcgagttca-gtcagattatcaaaagtttcattct-aagtctttccagattcaatctcatcctacattc 12852073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 140
Target Start/End: Complemental strand, 16839530 - 16839497
Alignment:
Q  107 ctcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    ||||||||||||||||||||||| ||||||||||    
T  16839530 ctcgtgcgacaaagatcgcaaaaccctaaacaag 16839497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 249
Target Start/End: Complemental strand, 4588590 - 4588524
Alignment:
Q  182 gcgagttcaggtcagattc-ccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||||||| |||||||| |||||||||||||||||  ||| | ||||||||||||||| ||||||||    
T  4588590 gcgagttcag-tcagattctccaaagtttcattctaag-tctttacaggttcaatctcatcctacattc 4588524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 243
Target Start/End: Original strand, 9513280 - 9513316
Alignment:
Q  207 tttcattctaaaatctatccaggttcaatctcattct 243  Q
    |||||||||||||||| | ||||||||||||||||||    
T  9513280 tttcattctaaaatcttttcaggttcaatctcattct 9513316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 243
Target Start/End: Original strand, 9521255 - 9521291
Alignment:
Q  207 tttcattctaaaatctatccaggttcaatctcattct 243  Q
    |||||||||||||||| | ||||||||||||||||||    
T  9521255 tttcattctaaaatcttttcaggttcaatctcattct 9521291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 122; Significance: 1e-62; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 81 - 249
Target Start/End: Complemental strand, 17061844 - 17061669
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgag-------ac 173  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||       ||    
T  17061844 ctaccccatggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattctgtaaataggtcactcgcgaggcgagagcctctac 17061745  T
Q  174 tcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  17061744 tcgccatcgcgagttcaggtcagattctcaaagttttattctaaaatctatccaggttcaatctcattctacattc 17061669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 44116742 - 44116916
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------c 173  Q
    ||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||| ||| || | |||||  ||||||||||||||||||       |    
T  44116742 ctaccccaaggttcaaccctcaacgactcgtgcaataaagatcgcaaaatcctaaactagcgttctgtaactgagtcactcgcgaggcgagagcctctgc 44116841  T
Q  174 tcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||    
T  44116842 tcgccatggcgagttcaggtcagattcccaaagtttcattct-aaatctttccgggttcaatctcattctacattc 44116916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 81 - 249
Target Start/End: Complemental strand, 12756600 - 12756426
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgag-------ac 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||| | ||  ||||||||||||||       ||    
T  12756600 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaaggcttttgtaattgggcaactcgcgaggcgagagcctctac 12756501  T
Q  174 tcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||||| ||||||||||||| |||| |||  |||||||| ||||  |||||||||||||||||||||||||||    
T  12756500 tcgccatggtgagttcaggtcagcttccaaaaagttcattcttaaat-aatccaggttcaatctcattctacattc 12756426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 83 - 171
Target Start/End: Complemental strand, 2280000 - 2279912
Alignment:
Q  83 accccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgag 171  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| | ||||||||  ||||||||||||||    
T  2280000 accccaaggttcaactctcaacaactcgtgtgacaaagatcgcaaaatcctaaacaagcattctataactaggcaactcgcgaggcgag 2279912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 81 - 244
Target Start/End: Complemental strand, 15143921 - 15143751
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------c 173  Q
    ||||||| |||||||||||| | | |||||||| |||||| ||||||||||||||  | ||| | | |  ||||||||||||||||||||||       |    
T  15143921 ctaccccgaggttcaactcttagcaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctaggtcactcgcgaggcgagagcctctgc 15143822  T
Q  174 tcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattcta 244  Q
    |||||||||||||| ||||||||| || ||||  ||||||||||||||| |||||||||||||||||||||    
T  15143821 tcgccatggcgagtacaggtcagaatcacaaaagttcattctaaaatctttccaggttcaatctcattcta 15143751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 81 - 249
Target Start/End: Complemental strand, 3564248 - 3564073
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------c 173  Q
    ||||||||||||| |||||| ||| |||||||| |||||| ||||||||||||||  | ||| | | |  || |||||||||||||||||||       |    
T  3564248 ctaccccaaggttaaactcttaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcatttgc 3564149  T
Q  174 tcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||  |||||||||||||||||||| |||||  ||||||||| ||||| ||||||||||||||||| ||||||||    
T  3564148 tcgctgtggcgagttcaggtcagatttccaaaagttcattctacaatctttccaggttcaatctcatcctacattc 3564073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 38227717 - 38227892
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------c 173  Q
    |||||||||||||||||||| ||| |||||||| |||||| |||||||| |||||  | ||| | | |   | |||||||||||||||||||       |    
T  38227717 ctaccccaaggttcaactcttaacaactcgtgcaacaaaggtcgcaaaaacctaacaaggcactctgtttatgggtcactcgcgaggcgagagcctctgc 38227816  T
Q  174 tcgccatggcgagttcaggtcagattcccaaa-gtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||| |||||||||||||||||| ||| ||| ||||||||||||| ||| ||||||||||||||||||||||||||    
T  38227817 tcgccgtggcgagttcaggtcagaatccaaaaagtttcattctaaa-tctttccaggttcaatctcattctacattc 38227892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 244
Target Start/End: Complemental strand, 12255675 - 12255505
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgag-------ac 173  Q
    |||||||||  ||||||||||||| ||||||| ||||||||||||||||||||||||||||||| | ||||| ||  ||||||||||||||       ||    
T  12255675 ctaccccaaaattcaactctcaacaactcgtgtgacaaagatcgcaaaatcctaaacaagcattctgtaactgggaaactcgcgaggcgagagcctctac 12255576  T
Q  174 tcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatcta-tccaggttcaatctcattcta 244  Q
    |||| |||||||||||||||   | |||||||  |||||||| ||| ||| |||||||||||||||| ||||    
T  12255575 tcgctatggcgagttcaggtgtaactcccaaaaattcattcttaaa-ctattccaggttcaatctcaatcta 12255505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 85 - 249
Target Start/End: Original strand, 9509430 - 9509601
Alignment:
Q  85 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------ctcgc 177  Q
    ||||||||||||||||| || |||| ||| |||||| |||||||||| |||  | ||| | | |  || |||||||||||||||||||       |||||    
T  9509430 cccaaggttcaactctcgacaactcttgcaacaaaggtcgcaaaatc-taacaaggcactctgtttctgggtcactcgcgaggcgagagcctctcctcgc 9509528  T
Q  178 catggcgagttcaggtcagattccca-aagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    | |||||||||||||||||| ||||| ||||||||||||| ||||| ||||||||||||||||| ||||||||    
T  9509529 cgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattc 9509601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 39267430 - 39267355
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattc-ccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||  ||| ||||||||||||||||| ||||||||    
T  39267430 ctcgccatggcgagttcag-tcagattctccaaagtttcattctaag-tctttccaggttcaatctcatcctacattc 39267355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 12699069 - 12699244
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattttttaactaggtcactcgcgaggcgaga------- 172  Q
    |||||||||||||||||| || || |||||||| |||||| |||||||| ||||| |||| || ||| |  || |||||||| ||||| ||||           
T  12699069 ctaccccaaggttcaactatcgacaactcgtgcaacaaaggtcgcaaaa-cctaa-caagtcactttgtttctgggtcactcacgaggtgagagcctctg 12699166  T
Q  173 ctcgccatggcgagttcaggtcagattcccaa-agtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||| |||||||||||||||||| |||||  |||||||||| | ||||| |||||||||||| |||| ||||||||    
T  12699167 ctcgccgtggcgagttcaggtcagaatcccacgagtttcattcaacaatctttccaggttcaatttcatcctacattc 12699244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 18302515 - 18302590
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattc-ccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||||||||||||||| |||||||  |||||||||||||||||  ||| ||||||||||||||||| ||||||||    
T  18302515 ctcgccatggcgagttcag-tcagattatccaaagtttcattctaag-tctttccaggttcaatctcatcctacattc 18302590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 140
Target Start/End: Complemental strand, 9033229 - 9033170
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    ||||||||||| |||||||  |||  ||||||||||||||||||||||| ||||||||||    
T  9033229 ctaccccaagggtcaactcataacatctcgtgcgacaaagatcgcaaaaccctaaacaag 9033170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 140
Target Start/End: Original strand, 14036435 - 14036494
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    ||||||||||| |||||||  |||  ||||||||||||||||||||||| ||||||||||    
T  14036435 ctaccccaaggatcaactcataacatctcgtgcgacaaagatcgcaaaaccctaaacaag 14036494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 140
Target Start/End: Original strand, 14044985 - 14045044
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    ||||||||||| |||||||  |||  ||||||||||||||||||||||| ||||||||||    
T  14044985 ctaccccaaggatcaactcataacatctcgtgcgacaaagatcgcaaaaccctaaacaag 14045044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 140
Target Start/End: Original strand, 14346465 - 14346524
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    ||||||||||| |||||||  |||  ||||||||||||||||||||||| ||||||||||    
T  14346465 ctaccccaaggatcaactcataacatctcgtgcgacaaagatcgcaaaaccctaaacaag 14346524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 140
Target Start/End: Original strand, 14355015 - 14355074
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    ||||||||||| |||||||  |||  ||||||||||||||||||||||| ||||||||||    
T  14355015 ctaccccaaggatcaactcataacatctcgtgcgacaaagatcgcaaaaccctaaacaag 14355074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 28505085 - 28505010
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattccc-aaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||||||||||||| |||||||||| | ||| |||||||||||  ||| | ||||||||||||||||||||||||    
T  28505085 ctcgccatggcgagttc-ggtcagattctctaaattttcattctaag-tcttttcaggttcaatctcattctacattc 28505010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 34201120 - 34201195
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattc-ccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||||||||||||||| |||||||| ||||| |||||||||||  ||| | ||||||||||||||||||| ||||    
T  34201120 ctcgccatggcgagttcag-tcagattctccaaattttcattctaag-tctttacaggttcaatctcattctaaattc 34201195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 243
Target Start/End: Complemental strand, 810915 - 810844
Alignment:
Q  172 actcgccatggcgagttcaggt-cagattcccaaagtttcattctaaaatctatccaggttcaatctcattct 243  Q
    |||||||||||||||||||||| ||| ||| ||||  ||||||||||| ||| |||||||||||||| |||||    
T  810915 actcgccatggcgagttcaggtacag-ttcacaaaaattcattctaaattctttccaggttcaatcttattct 810844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 140
Target Start/End: Complemental strand, 15008375 - 15008323
Alignment:
Q  88 aaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    ||||||||||||  |||  ||||||||||||||||||||||| ||||||||||    
T  15008375 aaggttcaactcataacatctcgtgcgacaaagatcgcaaaaccctaaacaag 15008323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 140
Target Start/End: Complemental strand, 9177549 - 9177490
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    ||||||||| | |||||||  |||  ||||||||||||||||||||||| ||||||||||    
T  9177549 ctaccccaaagatcaactcataacatctcgtgcgacaaagatcgcaaaaccctaaacaag 9177490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 140
Target Start/End: Original strand, 16091994 - 16092053
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    ||||||||||| |||||||  |||  ||||||||||||||||||||||| | ||||||||    
T  16091994 ctaccccaaggatcaactcataacatctcgtgcgacaaagatcgcaaaaccgtaaacaag 16092053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 140
Target Start/End: Complemental strand, 17017351 - 17017292
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    ||||||||||| |||||||  |||  || |||||||||||||||||||| ||||||||||    
T  17017351 ctaccccaaggatcaactcataacatcttgtgcgacaaagatcgcaaaaccctaaacaag 17017292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 140
Target Start/End: Complemental strand, 17060307 - 17060248
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    ||||||||||| |||||||  |||  ||||||||| ||||||||||||| ||||||||||    
T  17060307 ctaccccaaggatcaactcataacatctcgtgcgaaaaagatcgcaaaaccctaaacaag 17060248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 208 - 243
Target Start/End: Original strand, 44014545 - 44014580
Alignment:
Q  208 ttcattctaaaatctatccaggttcaatctcattct 243  Q
    ||||||||||||||| ||||||||||||||||||||    
T  44014545 ttcattctaaaatctttccaggttcaatctcattct 44014580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 249
Target Start/End: Complemental strand, 9751330 - 9751259
Alignment:
Q  177 ccatggcgagttcaggtcagattc-ccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||||||||||| ||| |||| |||||||||||||||||  ||| ||||||||||| ||||| ||||||||    
T  9751330 ccatggcgagttcag-tcaaattctccaaagtttcattctaag-tctttccaggttcaacctcatcctacattc 9751259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 126
Target Start/End: Complemental strand, 9751431 - 9751390
Alignment:
Q  85 cccaaggttcaactctcaacgactcgtgcgacaaagatcgca 126  Q
    |||||||||||||||  ||| |||||||||||||||||||||    
T  9751431 cccaaggttcaactcataacaactcgtgcgacaaagatcgca 9751390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 81 - 249
Target Start/End: Complemental strand, 15499 - 15324
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------c 173  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||| ||||| ||| |||||||||||||||||||||       |    
T  15499 ctaccccaaggttcaactctcaacgattcgtgcgacaaagatcgaaaaatcctaagcaagtattttgtaaataggtcactcgcgaggcgagagcctctgc 15400  T
Q  174 tcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  15399 tcgctatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccagattcaatctcattctacattc 15324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 95 - 249
Target Start/End: Complemental strand, 1947 - 1786
Alignment:
Q  95 aactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------ctcgccatggcgagt 187  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||       ||||||||||||| |    
T  1947 aactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattctgtaactgggtcactcgcgaggcgagagcctctgctcgccatggcgaat 1848  T
Q  188 tcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  1847 tcaggtcagatttccaaagtttcattctaaaatctttccaggttcaatctcattctacattc 1786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 107; Significance: 9e-54; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 17024 - 17192
Alignment:
Q  88 aaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------ctcgccat 180  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||| | ||| |||||||||||||||||||||       ||||||||    
T  17024 aaggttcaactatcaacgactcgtgctacaaagatcgcaaaatcctaaacaagtattctgtaaataggtcactcgcgaggcgagagcctctgctcgccat 17123  T
Q  181 ggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  17124 ggcgagttcaggtcatattctcaaagttttattctaaaatctatccaggttcaatctcattctacattc 17192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 249
Target Start/End: Complemental strand, 7552 - 7480
Alignment:
Q  176 gccatggcgagttcaggtcagattc-ccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||||||||||||| |||||||  |||||||||||||||||  ||| ||||||||||||||||| ||||||||    
T  7552 gccatggcgagttcag-tcagattatccaaagtttcattctaag-tctttccaggttcaatctcatcctacattc 7480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 85 - 249
Target Start/End: Complemental strand, 20305 - 20135
Alignment:
Q  85 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgag-------actcgc 177  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  || | ||| ||||  ||| ||||||||||       ||||||    
T  20305 cccaaggttcaactctcaacgactcgtgcgacaaagaccgcaaaatcctaaacaaggcttctgtaattaggcaacttgcgaggcgagagcctctactcgc 20206  T
Q  178 catggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||||||||||||||| |||| |||  ||||||||  |||  |||||||||||||||||||||||||||    
T  20205 catggcgagttcaggtcagcttccaaaaagttcattct-taattaatccaggttcaatctcattctacattc 20135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 71; Significance: 3e-32; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 4744 - 4920
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------c 173  Q
    |||||||||||||||||||| ||| ||| ||||||||  ||||||||||||||||  | | |   | |  || |||||||||||| ||||||       |    
T  4744 ctaccccaaggttcaactcttaacaacttgtgcgacactgatcgcaaaatcctaactaggtaccctgtttctgggtcactcgcgaagcgagagcctctgc 4843  T
Q  174 tcgccatggcgagttcaggtcagattcccaaagtttcattct-aaaatctatccaggttcaatctcattctacattc 249  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  4844 tcgccatggcgagttcaggtcagattcccaaagtttcattctaaaaatctttccaggttcaatctcattctacattc 4920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 12326 - 12502
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------c 173  Q
    |||||||||||||||||||| ||| ||| ||||||||  ||||||||||||||||  | | |   | |  || |||||||||||| ||||||       |    
T  12326 ctaccccaaggttcaactcttaacaacttgtgcgacactgatcgcaaaatcctaactaggtaccctgtttctgggtcactcgcgaagcgagagcctctgc 12425  T
Q  174 tcgccatggcgagttcaggtcagattcccaaagtttcattct-aaaatctatccaggttcaatctcattctacattc 249  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  12426 tcgccatggcgagttcaggtcagattcccaaagtttcattctaaaaatctttccaggttcaatctcattctacattc 12502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 22278 - 22454
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------c 173  Q
    |||||||||||||||||||| ||| ||| ||||||||  ||||||||||||||||  | | |   | |  || |||||||||||| ||||||       |    
T  22278 ctaccccaaggttcaactcttaacaacttgtgcgacactgatcgcaaaatcctaactaggtaccctgtttctgggtcactcgcgaagcgagagcctctgc 22377  T
Q  174 tcgccatggcgagttcaggtcagattcccaaagtttcattct-aaaatctatccaggttcaatctcattctacattc 249  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  22378 tcgccatggcgagttcaggtcagattcccaaagtttcattctaaaaatctttccaggttcaatctcattctacattc 22454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 3e-32; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 84 - 249
Target Start/End: Original strand, 18456955 - 18457126
Alignment:
Q  84 ccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgag-------actcg 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  || | ||| | ||  ||||||||||||||       |||||    
T  18456955 ccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctgaacaaggcttctgtaattgggcaactcgcgaggcgagagcctctactcg 18457054  T
Q  177 ccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||| |||||||||||| |||| |||  ||||||||  |||  |||||||||||||||||||||||||||    
T  18457055 ccatggctagttcaggtcagcttccaaaaagttcattct-taattaatccaggttcaatctcattctacattc 18457126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 29808669 - 29808592
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattcccaaagtttcattct-aaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  29808669 ctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaaatctttccaggttcaatctcattctacattc 29808592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 20594010 - 20594185
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------c 173  Q
    ||||||||||||||||| || ||| ||| |||||||| |||||||||||||||||  | ||| | | |  ||||||||||||||||||||||       |    
T  20594010 ctaccccaaggttcaacccttaacaacttgtgcgacacagatcgcaaaatcctaacaaggcactctgtttctaggtcactcgcgaggcgagagcctctgc 20594109  T
Q  174 tcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||| | |||||||||||||||||| |||||  || |||||| ||||| ||||||||||||||||| ||||||||    
T  20594110 tcgccgtagcgagttcaggtcagatttccaaaagtttattctacaatctttccaggttcaatctcatcctacattc 20594185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 249
Target Start/End: Complemental strand, 19303425 - 19303250
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------c 173  Q
    |||||||||||||||||||| | | ||| |||||||| |||||||||||||||||  | ||| | | |  || |||||||| ||||||||||       |    
T  19303425 ctaccccaaggttcaactcttagcaacttgtgcgacatagatcgcaaaatcctaacaaggcactctgtttctgggtcactctcgaggcgagagcctctgc 19303326  T
Q  174 tcgccatggcgagttcaggtcagattcccaaa-gtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||| |||||||||||||||||||| ||||| ||||||||||||| ||| | ||||||||||||||||||||||||    
T  19303325 tcgccgtggcgagttcaggtcagatttccaaaagtttcattctaaa-tcttttcaggttcaatctcattctacattc 19303250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 29060777 - 29060952
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------c 173  Q
    ||||||||||||||| |||| | | |||||||| |||||| ||||||||||||||  | ||| | | |  || |||||||||||||||||||       |    
T  29060777 ctaccccaaggttcagctcttagcaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctac 29060876  T
Q  174 tcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||| | |||||||||||||||||||| |||||  ||||||||| ||||| ||||||||||||||||| ||||||||    
T  29060877 tcgtcgtggcgagttcaggtcagatttccaaaagttcattctacaatctttccaggttcaatctcatcctacattc 29060952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 25644559 - 25644622
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 144  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||    
T  25644559 ctaccccaaggttcaactctcagcaactcgtgcgacaaagatcgcaaaaacctaaacaagcatt 25644622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 81 - 249
Target Start/End: Complemental strand, 18409711 - 18409536
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------c 173  Q
    |||||| ||||||||||||||||  |||||||| |||||| ||| ||||||||||  | ||| | | |  || ||||||| | |||||||||       |    
T  18409711 ctaccctaaggttcaactctcaataactcgtgcaacaaaggtcgtaaaatcctaacaaggcactctgtttctgggtcactagagaggcgagagcctctgc 18409612  T
Q  174 tcgccatggcgagttcaggtcaga-ttcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||| |||||||||||||||||| |||  |||||||||||||||| ||| ||||||||||||||||||||||||||    
T  18409611 tcgccgtggcgagttcaggtcagaattcaaaaagtttcattctaaa-tctttccaggttcaatctcattctacattc 18409536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 81 - 246
Target Start/End: Complemental strand, 25629239 - 25629067
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------c 173  Q
    |||||||||||||||||||| ||| |||||||| |||||  ||||||||||||||  | ||| | | |  || |||||||||||||||||||       |    
T  25629239 ctaccccaaggttcaactcttaacaactcgtgcaacaaaagtcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgc 25629140  T
Q  174 tcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctaca 246  Q
    |||||| ||||||| ||||||| | || ||||  || |||||||||| | |||||||||||||||||||||||    
T  25629139 tcgccacggcgagtacaggtcataatcacaaaagtttattctaaaatatttccaggttcaatctcattctaca 25629067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 28496258 - 28496182
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattc-ccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||||||||||||||||||||||||| | ||||||||||||| || ||| ||||||||||||||||||||||||||    
T  28496258 ctcgccatggcgagttcaggtcagattctcaaaagtttcattct-aagtctttccaggttcaatctcattctacattc 28496182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 22780006 - 22779936
Alignment:
Q  180 tggcgagttcaggtcagattccca-aagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||||| |||||||| ||||| ||||||||||||| ||||| ||||||||||||||||| ||||||||    
T  22780006 tggcgagtttaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattc 22779936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 243
Target Start/End: Original strand, 19652442 - 19652601
Alignment:
Q  93 tcaactctcaacgactcgtgcgacaaagatcgcaaa-atcctaaacaagc-attttttaactaggtcactcgcgaggcgaga-------ctcgccatggc 183  Q
    ||||||| || | |||||||||||||||||||||   ||||||||||||  ||||| ||||||| |  | ||||||||||||       |||||||||||    
T  19652442 tcaactcacatcaactcgtgcgacaaagatcgcatttatcctaaacaaggtattttgtaactagttagcccgcgaggcgagagcctctactcgccatggc 19652541  T
Q  184 gagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattct 243  Q
    ||||||||||   |||| ||||  ||||||||||| ||| ||||||||||||||||||||    
T  19652542 gagttcaggtacaattcacaaaaattcattctaaagtctttccaggttcaatctcattct 19652601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 249
Target Start/End: Complemental strand, 4185609 - 4185532
Alignment:
Q  172 actcgccatggcgagttcaggt-cagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||||||||||||||||||| ||| ||| ||||  ||||||||||| ||| |||||||||||||||| |||||||||    
T  4185609 actcgccatggcgagttcaggttcag-ttcacaaaaattcattctaaactctttccaggttcaatctcactctacattc 4185532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 214
Target Start/End: Complemental strand, 18821703 - 18821563
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattttttaactaggtcactcgcgaggcgaga------- 172  Q
    ||||||||||||||||||||| || |||||||| |||||| ||||||||||   |||||| || | | |  || |||| ||||||||||||||           
T  18821703 ctaccccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatc--taacaagtcactctgtttctgggtcgctcgcgaggcgagagcctctg 18821606  T
Q  173 ctcgccatggcgagttcaggtcagattccca-aagtttcattc 214  Q
    ||||||||||||||||||||||||| ||||| |||||||||||    
T  18821605 ctcgccatggcgagttcaggtcagaatcccacaagtttcattc 18821563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 174 - 249
Target Start/End: Complemental strand, 17287581 - 17287505
Alignment:
Q  174 tcgccatggcgagttcaggtcagattccca-aagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||| ||||||||| |||||||| ||||| ||||||||||||| ||||| ||||||| ||||| ||| ||||||||    
T  17287581 tcgccgtggcgagtttaggtcagaatcccacaagtttcattctacaatctttccaggtacaatcacatcctacattc 17287505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 244
Target Start/End: Complemental strand, 27333070 - 27332998
Alignment:
Q  172 actcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattcta 244  Q
    ||||||||||||||||||||||   | || ||||  ||||||||||||||| ||||||||||| |||||||||    
T  27333070 actcgccatggcgagttcaggtgcaactcacaaaacttcattctaaaatctttccaggttcaacctcattcta 27332998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 244
Target Start/End: Complemental strand, 27393810 - 27393738
Alignment:
Q  172 actcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattcta 244  Q
    ||||||||||||||||||||||   | || ||||  ||||||||||||||| ||||||||||| |||||||||    
T  27393810 actcgccatggcgagttcaggtgcaactcacaaaacttcattctaaaatctttccaggttcaacctcattcta 27393738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 128
Target Start/End: Complemental strand, 17287680 - 17287633
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaa 128  Q
    |||||||||||||||||||||||| |||||||| |||||||| |||||    
T  17287680 ctaccccaaggttcaactctcaacaactcgtgcaacaaagatagcaaa 17287633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 140
Target Start/End: Original strand, 18696724 - 18696783
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    ||||||||||| |||||||  |||  ||||||||||||||||||||||| ||||||||||    
T  18696724 ctaccccaaggatcaactcataacatctcgtgcgacaaagatcgcaaaaccctaaacaag 18696783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 140
Target Start/End: Original strand, 20224180 - 20224239
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    ||||||||||| |||||||  |||  ||||||||||||||||||||||| ||||||||||    
T  20224180 ctaccccaaggatcaactcataacatctcgtgcgacaaagatcgcaaaaccctaaacaag 20224239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 140
Target Start/End: Original strand, 22118164 - 22118223
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    ||||||||||| |||||||  |||  ||||||||||||||||||||||| ||||||||||    
T  22118164 ctaccccaaggatcaactcataacatctcgtgcgacaaagatcgcaaaaccctaaacaag 22118223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 249
Target Start/End: Complemental strand, 4667999 - 4667922
Alignment:
Q  172 actcgccatggcgagttcaggt-cagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||||||||||||||||||| ||| ||| ||||  ||||||||||| ||| ||||||| |||||||| |||||||||    
T  4667999 actcgccatggcgagttcaggttcag-ttcacaaaaattcattctaaactctttccaggtccaatctcactctacattc 4667922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 21939720 - 21939795
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattc-ccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||||||||||||||| ||||||||| ||||||||| ||||| || ||| |||||| |||||||||| ||||||||    
T  21939720 ctcgccatggcgagttca-gtcagattctccaaagttttattct-aagtctttccaggctcaatctcatcctacattc 21939795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 214
Target Start/End: Complemental strand, 20360844 - 20360704
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattttttaactaggtcactcgcgaggcgaga------- 172  Q
    |||||| |||||||||  |||||| |||||||| |||||| |||||||| ||||| |||| || | | |  || |||||||||||||||||||           
T  20360844 ctacccaaaggttcaatcctcaacaactcgtgcaacaaaggtcgcaaaa-cctaa-caagtcactctgtttctgggtcactcgcgaggcgagagcctcag 20360747  T
Q  173 ctcgccatggcgagttcaggtcagattccca-aagtttcattc 214  Q
    ||||||||||||||||||||||||| ||||| |||||||||||    
T  20360746 ctcgccatggcgagttcaggtcagaatcccacaagtttcattc 20360704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 214
Target Start/End: Complemental strand, 20638163 - 20638027
Alignment:
Q  85 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------ctcgc 177  Q
    ||||||||||||||||| || |||||||| |||||| ||||||||| ||||  | ||| | | |  || |||||||||||||| ||||       |||||    
T  20638163 cccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaat-ctaacaaggcactctgtttctgggtcactcgcgaggtgagagcctttgctcgc 20638065  T
Q  178 catggcgagttcaggtcagattccca-aagtttcattc 214  Q
    | |||||||||||||||||| ||||| |||||||||||    
T  20638064 cgtggcgagttcaggtcagaatcccacaagtttcattc 20638027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 132
Target Start/End: Original strand, 22831739 - 22831790
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcc 132  Q
    |||||| | |||||||||||| |||| ||||||||||||| |||||||||||    
T  22831739 ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc 22831790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 140
Target Start/End: Original strand, 33443282 - 33443341
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    |||||| |||| |||||||  |||  ||||||||||||||||||||||| ||||||||||    
T  33443282 ctaccctaaggatcaactcataacatctcgtgcgacaaagatcgcaaaaccctaaacaag 33443341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 139
Target Start/End: Original strand, 18706548 - 18706601
Alignment:
Q  86 ccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaa 139  Q
    |||||| |||||||  |||  ||||||||||||||||||||||| |||||||||    
T  18706548 ccaaggatcaactcataacatctcgtgcgacaaagatcgcaaaaccctaaacaa 18706601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 140
Target Start/End: Complemental strand, 20078058 - 20077998
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaa-aatcctaaacaag 140  Q
    ||||||||||| |||||||  |||  ||||||||||||||||||||| || ||||||||||    
T  20078058 ctaccccaaggatcaactcataacatctcgtgcgacaaagatcgcaagaaccctaaacaag 20077998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 12166 - 12340
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgag-------ac 173  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |  || | ||| | ||  |||||||||| |||       ||    
T  12166 ctaccccaaggttcaactctcaacgactcgtgtgacaaagatcgcaaaatcctaaacagggcttctgtaattgggcaactcgcgaggtgagagcctctac 12265  T
Q  174 tcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||||||||||||||||||| |||| |||  ||||||||  |||  |||||||||||||||||||||||||||    
T  12266 tcgccatggcgagttcaggtcagtttccaaaaagttcattct-taattaatccaggttcaatctcattctacattc 12340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 23660259 - 23660434
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------c 173  Q
    |||||||||||||||||||||||  |||||||| | |||| || ||||| |||||  | ||| | | |  || |||||||| ||||||||||       |    
T  23660259 ctaccccaaggttcaactctcaataactcgtgcaataaaggtcacaaaaacctaacaaggcactctgtttctgggtcactcacgaggcgagagcctctgc 23660358  T
Q  174 tcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  23660359 tcgccgtggcgagttcaggtcagattccaaaagtttcattctaaaatctttccaggttcaatctcattctacattc 23660434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 23708500 - 23708411
Alignment:
Q  83 accccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga 172  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| | ||||| ||| |||||| ||||||||    
T  23708500 accccaaggttcaactatcaacaactcgtgcgacaaagatcgcaaaatcctaaacaagcattctgtaactgggtaactcgcaaggcgaga 23708411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 249
Target Start/End: Complemental strand, 22738064 - 22737889
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------c 173  Q
    |||||||||||||||| ||||||| |||||||| |||||| |||||||| |||||  | ||| | | |  ||||||||||||||||||||||       |    
T  22738064 ctaccccaaggttcaattctcaacaactcgtgcaacaaaggtcgcaaaa-cctaacaaggcactctgtttctaggtcactcgcgaggcgagagcctctgc 22737966  T
Q  174 tcgccatggcgagttcaggtcagattccca-aagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||| |||||||||||| ||||| ||||| ||||||||||||| ||||| || |||||||||||||| ||||||||    
T  22737965 tcgccgtggcgagttcagttcagaatcccacaagtttcattctacaatctttctaggttcaatctcatcctacattc 22737889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 23076679 - 23076852
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------c 173  Q
    ||||||||| |||||||||||||| |||||||| |||||| |||||||| |||||  | ||| | | |  || ||| |||||||||||||||       |    
T  23076679 ctaccccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaa-cctaacaaggcactctgtttctgggtaactcgcgaggcgagagcctctac 23076777  T
Q  174 tcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||| |||||||||||||||||| | ||||||||||||||| |||||| ||||||| ||||||||| ||||||||    
T  23076778 tcgccgtggcgagttcaggtcagaattccaaagtttcattct-aaatctttccaggtccaatctcatcctacattc 23076852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 81 - 249
Target Start/End: Complemental strand, 32451813 - 32451638
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattttttaactaggtcactcgcgaggcgaga------- 172  Q
    ||||||||||||||| ||||| || |||||||| |||||| ||||||||||   |||||| || | | |  || |||||||||||||||||||           
T  32451813 ctaccccaaggttcatctctcgacaactcgtgcaacaaaggtcgcaaaatct--aacaagtcactctgtttctgggtcactcgcgaggcgagagcctctg 32451716  T
Q  173 ctcgccatggcgagttcaggtcagattccca-aagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||| |||||||||||||||||| ||||| ||||||||||||| ||||| |||| |||||||||||| ||||||||    
T  32451715 ctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccatgttcaatctcatcctacattc 32451638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 144
Target Start/End: Original strand, 19672068 - 19672127
Alignment:
Q  85 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 144  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  19672068 cccaaggttcaactctcaacaactcgtgcgacaaagatcgcaaaatcctaaacaaccatt 19672127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 27753910 - 27753987
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattccca-aagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||| |||||||||||||||||| ||||| ||||||||||||| ||||| ||||||||||||||||| ||||||||    
T  27753910 ctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattc 27753987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 22731012 - 22730942
Alignment:
Q  180 tggcgagttcaggtcagattccca-aagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||||||||||||||| ||||| ||||||||||||| ||||| ||||||||||||||||| ||||||||    
T  22731012 tggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattc 22730942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 172 - 249
Target Start/End: Complemental strand, 298601 - 298524
Alignment:
Q  172 actcgccatggcgagttcaggtcagattccca-aagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||| |||||||||||||||||| ||||| |||||||||||| |||||| ||||||||||||||||| ||| ||||    
T  298601 actcgccgtggcgagttcaggtcagaatcccacaagtttcattct-aaatctttccaggttcaatctcatcctatattc 298524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 22337352 - 22337527
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttt-taactaggtcactcgcgaggcgaga------- 172  Q
    |||| ||||||||||||||||||| |||||||| |||||| || ||||| ||||| ||||  | | | |  || |||||||||||||||||||           
T  22337352 ctactccaaggttcaactctcaacaactcgtgcaacaaaggtcacaaaaacctaa-caagactctctgtttctgggtcactcgcgaggcgagagcctcta 22337450  T
Q  173 ctcgccatggcgagttcaggtcagat-tcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||| |||||| |||||||||||  ||  |||||||||||||||| ||| ||||||||||||||||| ||||||||    
T  22337451 ctcgccgtggcgaattcaggtcagaactcaaaaagtttcattctaaa-tctttccaggttcaatctcatcctacattc 22337527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 243
Target Start/End: Original strand, 28406314 - 28406385
Alignment:
Q  172 actcgccatggcgagttcaggt-cagattcccaaagtttcattctaaaatctatccaggttcaatctcattct 243  Q
    |||||||||||||||||||||| ||| ||| |||| ||| |||||||||||| | ||||||||||||||||||    
T  28406314 actcgccatggcgagttcaggttcag-ttcacaaaattttattctaaaatctttacaggttcaatctcattct 28406385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 140
Target Start/End: Original strand, 23287600 - 23287659
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    |||||| |||| ||||||| ||||  ||||||||||||||||||||||| ||||||||||    
T  23287600 ctaccctaaggatcaactcacaacatctcgtgcgacaaagatcgcaaaaccctaaacaag 23287659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 23071747 - 23071672
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattccc-aaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||||||||||||| |||||||||| | ||| |||||||||||  ||| | ||||||||||||||||||||||||    
T  23071747 ctcgccatggcgagttc-ggtcagattctctaaattttcattctaag-tcttttcaggttcaatctcattctacattc 23071672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 172
Target Start/End: Complemental strand, 20520076 - 20519984
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaa-gcattttttaactaggtcactcgcgaggcgaga 172  Q
    ||||||||||| | |||||  |||  ||||||| ||||||||||||||| ||||||||| | ||| | ||||||||  |||||||||||||||    
T  20520076 ctaccccaaggataaactcataacatctcgtgcaacaaagatcgcaaaaccctaaacaaggtattctgtaactaggcaactcgcgaggcgaga 20519984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 140
Target Start/End: Complemental strand, 18546828 - 18546769
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    ||||||||||| |||||||  |||   |||||||||||||||||||||| ||||||||||    
T  18546828 ctaccccaaggatcaactcataacatttcgtgcgacaaagatcgcaaaaccctaaacaag 18546769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 23286098 - 23286148
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatc 131  Q
    |||||| ||||||||||||||||| |||| ||| |||||| ||||||||||    
T  23286098 ctacccaaaggttcaactctcaacaactcatgcaacaaaggtcgcaaaatc 23286148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 23654270 - 23654220
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatc 131  Q
    |||||| |||||||||||||| || |||||||| |||||| ||||||||||    
T  23654270 ctacccaaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatc 23654220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 81 - 168
Target Start/End: Original strand, 225644 - 225731
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggc 168  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||| || |||||||||||    
T  225644 ctaccccaaggttcaactctcaacaactcgtgcgacaaagatcgcaaaatcctaaacaagcattctgtaactatgtaactcgcgaggc 225731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 38997 - 39171
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattttttaactaggtcactcgcgaggcgaga------- 172  Q
    |||||||||||||||||||||||| |||||||| |||||| |||||||| ||||| |||| || | | |  || |||||||||||||||||||           
T  38997 ctaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaa-caagtcactatgtttctgggtcactcgcgaggcgagagcctctg 39095  T
Q  173 ctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||| |||||||||||||||||| |||  ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  39096 ctcgccgtggcgagttcaggtcagaatccacaagtttcattc-aaaatctttccaggttcaatctcattctacattc 39171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 81 - 249
Target Start/End: Complemental strand, 17099 - 16924
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------c 173  Q
    ||||||||||||| |||||||||| |||||||| |||||| ||||||||||||||  | | | | | |  || |||||||||||||||||||       |    
T  17099 ctaccccaaggtttaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaataaggtactctgtttctgggtcactcgcgaggcgagagcctctgc 17000  T
Q  174 tcgccatggcgagttcaggtcaga-ttcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    || || |||||||||||||||||| |||| |||||||||||||||| ||| ||||||||||||||||||||||||||    
T  16999 tctccgtggcgagttcaggtcagaattccaaaagtttcattctaaa-tctttccaggttcaatctcattctacattc 16924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 81 - 140
Target Start/End: Complemental strand, 79213 - 79154
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  79213 ctaccccaaggttcaactctcaatgactcgtgcgacaaagatcgcaaaatcctaaacaag 79154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 81 - 249
Target Start/End: Complemental strand, 339834 - 339660
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------c 173  Q
    ||||||||||||||||| || |||||||||||| |||||| |||||||| |||||  | ||| | | |  || |||||||||||||||||||       |    
T  339834 ctaccccaaggttcaacccttaacgactcgtgcaacaaaggtcgcaaaa-cctaacaaggcactctatttctgggtcactcgcgaggcgagagcctctgc 339736  T
Q  174 tcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||| ||||||||||| ||||||||||||||  ||||||||| ||||| ||||||||||||||||| ||||||||    
T  339735 tcgccgtggcgagttcatgtcagattcccaaaagttcattctacaatctttccaggttcaatctcatcctacattc 339660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 579 - 754
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattttttaactaggtcactcgcgaggcgaga------- 172  Q
    |||||||||||||||||||||||| |||| ||| |||||| | |||||| ||||| |||| || | | |  || |||||||||||||||||||           
T  579 ctaccccaaggttcaactctcaacaactcatgcaacaaaggttgcaaaaacctaa-caagacactctgtttctgggtcactcgcgaggcgagagcctcta 677  T
Q  173 ctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||  ||||||||||| ||||||||| |||||||||||||||| ||| || |||||||||||||||||||||||    
T  678 ctcgccgcggcgagttcagttcagattccaaaagtttcattctaaattctttctaggttcaatctcattctacattc 754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 3707 - 3882
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------c 173  Q
    ||||||||| |||||| ||||||| |||||||| |||||| |||||||| |||||  |  || | | |   | |||||||||||||||||||       |    
T  3707 ctaccccaaagttcaattctcaacaactcgtgcaacaaaggtcgcaaaa-cctaacaactcactctgtttttgggtcactcgcgaggcgagagcctctgc 3805  T
Q  174 tcgccatggcgagttcaggtcagattccca-aagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||| |||||||||||||||||| ||||| |||||| |||||| ||||  ||||||||||||||||| ||||||||    
T  3806 tcgccgtggcgagttcaggtcagaatcccacaagtttgattctacaatcattccaggttcaatctcatcctacattc 3882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 249
Target Start/End: Complemental strand, 16484 - 16308
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------c 173  Q
    |||||||||||||||||||  ||| ||| |||||||| |||||||||||||| ||  | ||| | | |   | |||||||||||||||||||       |    
T  16484 ctaccccaaggttcaactcctaacaacttgtgcgacacagatcgcaaaatcccaacaaggcactctgtttttgggtcactcgcgaggcgagagcctctgc 16385  T
Q  174 tcgccatggcgagttcaggtcagattcccaaa-gtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||||||||||||||||| ||||| ||||| ||||||||| ||||||| ||||||||||||||||||||| ||||    
T  16384 tcgccatggcgagttcaggttagatttccaaacgtttcattcgaaaatctttccaggttcaatctcattctaaattc 16308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 243
Target Start/End: Original strand, 10400 - 10571
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------c 173  Q
    |||||||||||||||||||| ||| ||| |||||||| |||||||||||||||||  | ||| ||| |  ||||||||||||||||||| ||       |    
T  10400 ctaccccaaggttcaactcttaacaacttgtgcgacacagatcgcaaaatcctaacaaggcactttgtttctaggtcactcgcgaggcgggaagctctgc 10499  T
Q  174 tcgccatggcgagttcaggtcaga--ttcccaaagtttcattctaaaatctatccaggttcaatctcattct 243  Q
    ||||| ||||||||||||||||||  ||   ||  |||||||||||||||| ||||||||||||||||||||    
T  10500 tcgccgtggcgagttcaggtcagaatttgaaaatttttcattctaaaatctttccaggttcaatctcattct 10571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 86 - 249
Target Start/End: Original strand, 20645 - 20815
Alignment:
Q  86 ccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------ctcgcc 178  Q
    |||||||||||||||| || |||||||| |||||| |||||||||| |||  | ||| | | |  ||||||| ||||||||||||||       ||||||    
T  20645 ccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatc-taacaaggcactctgtttctaggtcgctcgcgaggcgagagcctctgctcgcc 20743  T
Q  179 atggcgagttcaggtcagattccca-aagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
     |||||||||||||||||| ||||| ||||||||||||| ||||| ||||||||||||||||| ||||||||    
T  20744 gtggcgagttcaggtcagaatcccacaagtttcattctataatctttccaggttcaatctcatcctacattc 20815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 249
Target Start/End: Complemental strand, 25949 - 25774
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------c 173  Q
    ||||||||||||||| |||| | | |||||||| |||||| ||||||||||||||  | ||| | | |  || |||||||||||||||||||       |    
T  25949 ctaccccaaggttcagctcttagcaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgc 25850  T
Q  174 tcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||| |||||||||||||||||||| |||||  ||||||||| ||||| | ||||||||||||||| ||||||||    
T  25849 tcgccgtggcgagttcaggtcagatttccaaaaattcattctacaatcttttcaggttcaatctcatcctacattc 25774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 249
Target Start/End: Complemental strand, 33379 - 33203
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------c 173  Q
    |||||||||||||||||||| ||| ||| ||  |||| ||||||||||||||| |  | ||| | | |  || |||||| ||||||||||||       |    
T  33379 ctaccccaaggttcaactcttaacaacttgtatgacacagatcgcaaaatcctgacaaggcactctgtttctgggtcacacgcgaggcgagagcctttgc 33280  T
Q  174 tcgccatggcgagttcaggtcaga-ttcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||| |||||||||||||| ||| |||| |||||||||||||||||||| ||||||||||||||||| ||||||||    
T  33279 tcgccgtggcgagttcaggtaagacttccaaaagtttcattctaaaatctttccaggttcaatctcatcctacattc 33203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 171 - 249
Target Start/End: Complemental strand, 17796 - 17717
Alignment:
Q  171 gactcgccatggcgagttcaggtcagattccca-aagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||||| |||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||| ||||||||    
T  17796 gactcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctatccaggttcaatctcatcctacattc 17717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 172 - 249
Target Start/End: Original strand, 2185 - 2263
Alignment:
Q  172 actcgccatggcgagttcaggtcagattccca-aagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||| ||||| ||||||||||||||||| ||||||||    
T  2185 actcgccatggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattc 2263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 207303 - 207228
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattc-ccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||  ||| ||||||||||||||||| ||||||||    
T  207303 ctcgccatggcgagttcag-tcagattctccaaagtttcattctaag-tctttccaggttcaatctcatcctacattc 207228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 126
Target Start/End: Complemental strand, 207400 - 207359
Alignment:
Q  85 cccaaggttcaactctcaacgactcgtgcgacaaagatcgca 126  Q
    |||||||||||||||  ||| |||||||||||||||||||||    
T  207400 cccaaggttcaactcataacaactcgtgcgacaaagatcgca 207359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 40149 - 40323
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------c 173  Q
    |||||||||||||||||||||||| |||||||| |||||| |||||||  |||||  | | | | | |  || |||||||||||||||||||       |    
T  40149 ctaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaacacctaacaaggtactctgtttctgggtcactcgcgaggcgagagcctctac 40248  T
Q  174 tcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||| |||||||||||||||||||| |||||  ||||||||| ||||| | ||||||||||||||| ||||||||    
T  40249 tcgccgtggcgagttcaggtcagatttccaaaagttcattctacaatctgt-caggttcaatctcatcctacattc 40323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 52150 - 52324
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattttttaactaggtcactcgcgaggcgaga------- 172  Q
    |||||||||||||||||||||||| |||||||| |||| | |||||||| ||||| |||| || |   |  || |||||||||||||||||||           
T  52150 ctaccccaaggttcaactctcaacaactcgtgcaacaagg-tcgcaaaa-cctaa-caagacactcagtttctgggtcactcgcgaggcgagagcctctg 52246  T
Q  173 ctcgccatggcgagttcaggtcagattccca-aagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||| |||||||||||||||||| ||||| ||||||||||||| ||||| ||||||||||||||||| ||||||||    
T  52247 ctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattc 52324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 85 - 248
Target Start/End: Complemental strand, 24181 - 24012
Alignment:
Q  85 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------ctcgc 177  Q
    ||||| ||||||||||| || |||||||| |||||| |||||||||| |||  | ||| ||| |  ||||||||||||||||||||||       |||||    
T  24181 cccaaagttcaactctcgacaactcgtgcaacaaaggtcgcaaaatc-taacaaggcactttgtttctaggtcactcgcgaggcgagagcctctgctcgc 24083  T
Q  178 catggcgagttcaggtcagattccca-aagtttcattctaaaatctatccaggttcaatctcattctacatt 248  Q
      |||||||||||||||||| ||||| ||||||||||||| ||| | ||||||||||||||||| |||||||    
T  24082 tgtggcgagttcaggtcagaatcccacaagtttcattctacaattt-tccaggttcaatctcatcctacatt 24012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 13329 - 13504
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattttttaactaggtcactcgcgaggcgaga------- 172  Q
    ||||||||| |||||||||||||| |||||||| |||||| |||||||| ||||| |||| || |   |  || |||||||||||||||||||           
T  13329 ctaccccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaa-cctaa-caagacactcagtttctgggtcactcgcgaggcgagagcctctg 13426  T
Q  173 ctcgccatggcgagttcaggtcagattccca-aagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||| |||||||||||||||||| ||||| ||||||||||||| ||||| | ||| ||||||||||| ||||||||    
T  13427 ctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatcttttcagattcaatctcatcctacattc 13504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 34457 - 34532
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattc-ccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||||||||||||| |||||||||| ||||| |||||||||||  ||| | ||||||||||||||||||||||||    
T  34457 ctcgccatggcgagttc-ggtcagattctccaaattttcattctaag-tcttttcaggttcaatctcattctacattc 34532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 232
Target Start/End: Original strand, 124826 - 124980
Alignment:
Q  85 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattttttaactaggtcactcgcgaggcgaga-------ctcg 176  Q
    ||||||||||||||||| || |||||||| |||||| ||||||||||   |||||| || | |||  || |||||||||||||||||||       ||||    
T  124826 cccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatct--aacaagacactctttttctgggtcactcgcgaggcgagagcctctgctcg 124923  T
Q  177 ccatggcgagttcaggtcagattccca-aagtttcattctaaaatctatccaggttc 232  Q
    || |||||||||||||||||| ||||| ||||||||||||| ||||| |||||||||    
T  124924 ccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttc 124980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 81 - 249
Target Start/End: Complemental strand, 51768 - 51593
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattttttaactaggtcactcgcgaggcgaga------- 172  Q
    ||||||||||||||||||||| || |||||||| |||||| ||||||||||   |||||| || | | |  || ||||||| |||||| ||||           
T  51768 ctaccccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatct--aacaagtcactctgtttctgggtcactagcgaggtgagagcctctg 51671  T
Q  173 ctcgccatggcgagttcaggtcagattccca-aagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||| |||||||||||||||| | ||||| ||||||||||| | ||||| ||||||||||||||||| ||||||||    
T  51670 ctcgccgtggcgagttcaggtcaaaatcccacaagtttcattcgacaatctttccaggttcaatctcatcctacattc 51593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 45; Significance: 9e-17; HSPs: 5)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 26561 - 26637
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||| |||||| ||||||||||| ||| |||||||||||||| ||||| |||||||| |||||||| ||||||||    
T  26561 ctcgccgtggcgacttcaggtcagaatccaaaagtttcattctacaatctttccaggtttaatctcatcctacattc 26637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 85 - 249
Target Start/End: Original strand, 40097 - 40268
Alignment:
Q  85 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------ctcgc 177  Q
    |||||||||||||||||||| | | |||| |||||| |||||||||| |||  | ||| |   |  ||||||||| ||||||||||||       |||||    
T  40097 cccaaggttcaactctcaacaaattgtgcaacaaaggtcgcaaaatcataacaaggcactcggtttctaggtcacccgcgaggcgagagcctctgctcgc 40196  T
Q  178 catggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    | |||||||| ||||| |||  || |||||||||||||| ||||| ||||||||||||||||| || |||||    
T  40197 cgtggcgagtacaggttagaaaccaaaagtttcattctacaatctttccaggttcaatctcatcctccattc 40268  T

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Target: scaffold0026; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 26132 - 26186
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 135  Q
    |||||||||||||||||||||||| | |||||| |||||| ||||||||||||||    
T  26132 ctaccccaaggttcaactctcaacaaatcgtgcaacaaaggtcgcaaaatcctaa 26186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 59287 - 59212
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattccc-aaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||||||||||||| |||||| ||| | ||| |||||||||||  ||| | ||||||||||||||||||||||||    
T  59287 ctcgccatggcgagttc-ggtcaggttctctaaattttcattctaag-tcttttcaggttcaatctcattctacattc 59212  T

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Target: scaffold0026; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 39680 - 39640
Alignment:
Q  209 tcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||||| | ||| ||||||||||||||||||||||||||    
T  39680 tcattctacattctttccaggttcaatctcattctacattc 39640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 140
Target Start/End: Original strand, 13367 - 13426
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    ||||||||||||| |||||  ||| |||||||||||||||||||||||||||||||||||    
T  13367 ctaccccaaggtttaactcataacaactcgtgcgacaaagatcgcaaaatcctaaacaag 13426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 171
Target Start/End: Complemental strand, 15983 - 15892
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaa-gcattttttaactaggtcactcgcgaggcgag 171  Q
    |||||| ||||||||||||  ||| ||| |||||||||||||||||||||||||||||| ||||| | ||||| ||  ||||||||||||||    
T  15983 ctacccaaaggttcaactcataacaacttgtgcgacaaagatcgcaaaatcctaaacaaggcattctgtaactgggcaactcgcgaggcgag 15892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 222
Target Start/End: Original strand, 39713 - 39861
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------c 173  Q
    ||||||||||||||||| || ||| ||| |||||||| ||||||||||||||| |  | ||| | | |  || |||||||||||||||||||       |    
T  39713 ctaccccaaggttcaacccttaacaacttgtgcgacacagatcgcaaaatcctgacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgc 39812  T
Q  174 tcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatct 222  Q
    ||||| |||||||||||||||||||| |||||  ||||||||| |||||    
T  39813 tcgccgtggcgagttcaggtcagatttccaaaagttcattctacaatct 39861  T

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Target: scaffold0049 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 222
Target Start/End: Complemental strand, 75099 - 74951
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------c 173  Q
    ||||||||||||||||| || ||| ||| |||||||| ||||||||||||||| |  | ||| | | |  || |||||||||||||||||||       |    
T  75099 ctaccccaaggttcaacccttaacaacttgtgcgacacagatcgcaaaatcctgacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgc 75000  T
Q  174 tcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatct 222  Q
    ||||| |||||||||||||||||||| |||||  ||||||||| |||||    
T  74999 tcgccgtggcgagttcaggtcagatttccaaaagttcattctacaatct 74951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 791 - 722
Alignment:
Q  180 tggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||||||||||||||||| |||||  ||||||||| ||||| | ||| ||||||||||||||||||||    
T  791 tggcgagttcaggtcagatttccaaaagttcattctacaatcttttcagattcaatctcattctacattc 722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 129
Target Start/End: Complemental strand, 3035 - 2987
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaa 129  Q
    |||||||||||||||||||||||| |||||||| ||| || ||||||||    
T  3035 ctaccccaaggttcaactctcaacaactcgtgcaacacaggtcgcaaaa 2987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 243
Target Start/End: Original strand, 7146 - 7217
Alignment:
Q  172 actcgccatggcgagttcaggt-cagattcccaaagtttcattctaaaatctatccaggttcaatctcattct 243  Q
    |||||||||||||||||||||| ||| ||| ||||  ||||||||||||||| ||||||||||||||||||||    
T  7146 actcgccatggcgagttcaggttcag-ttcacaaaaattcattctaaaatctttccaggttcaatctcattct 7217  T

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Target: scaffold0121 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 249
Target Start/End: Complemental strand, 8413 - 8241
Alignment:
Q  84 ccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattttttaactaggtcactcgcgaggcgaga-------ctc 175  Q
    |||||| |||||||||||||| |||||||| || ||| |||||||| ||||| |||| || | | |  || |||||||||||||||||||       |||    
T  8413 ccccaacgttcaactctcaacaactcgtgcaacgaaggtcgcaaaa-cctaa-caagacactctgtttctgggtcactcgcgaggcgagagcctctactc 8316  T
Q  176 gccatggcgagttcaggtcaga-ttcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
     || ||||||||| ||| |||| |||| |||||||||||||| ||||| ||||||||||||||||| ||||||||    
T  8315 accgtggcgagtttaggccagaattccaaaagtttcattctacaatctttccaggttcaatctcatcctacattc 8241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 8712 - 8887
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattttttaactaggtcactcgcgaggcgaga------- 172  Q
    |||| ||||||||||||||||||| |||||||| |||||| |||||||| ||||| |||| || | | |  || ||||| |||||||||||||           
T  8712 ctactccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaa-cctaa-caagacactctgtttctgggtcattcgcgaggcgagagcctcta 8809  T
Q  173 ctcgccatggcgagttcaggtcagattccca-aagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    || ||| |||||||||||||||||| ||||| ||||| |||| || ||||| || |||||||||||||| ||||||||    
T  8810 ctggccgtggcgagttcaggtcagaatcccacaagttccattttacaatctttctaggttcaatctcatcctacattc 8887  T

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Target: scaffold0231 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 171
Target Start/End: Original strand, 23119 - 23209
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattttttaactaggtcactcgcgaggcgag 171  Q
    |||||||||||||||||||||||| |||||||| |||||| |||||||| ||| |||||| || | | |  |||||||||||||||||||||    
T  23119 ctaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacct-aacaagacactctgtttctaggtcactcgcgaggcgag 23209  T

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Target: scaffold0150 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 173 - 243
Target Start/End: Original strand, 32419 - 32489
Alignment:
Q  173 ctcgccatggcgagttcaggt-cagattcccaaagtttcattctaaaatctatccaggttcaatctcattct 243  Q
    ||||||||||||||||||||| ||| ||| |||| |||||||||||| ||| ||||||||||||||||||||    
T  32419 ctcgccatggcgagttcaggttcag-ttcacaaaatttcattctaaagtctttccaggttcaatctcattct 32489  T

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Target: scaffold0130 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 218
Target Start/End: Original strand, 28067 - 28212
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------c 173  Q
    |||||||||||||||||||| ||| ||| |||||||| |||| |||||||||| |  | ||| | | |  || |||||||||||||||||||       |    
T  28067 ctaccccaaggttcaactcttaacaacttgtgcgacacagattgcaaaatcctgacaaggcactctgtttctgggtcactcgcgaggcgagagcctttgc 28166  T
Q  174 tcgccatggcgagttcaggtcag-attcccaaagtttcattctaaa 218  Q
    ||||| ||||||||||||||||| ||||  ||||||||||||||||    
T  28167 tcgccgtggcgagttcaggtcagaattcaaaaagtttcattctaaa 28212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 173 - 243
Target Start/End: Original strand, 132989 - 133059
Alignment:
Q  173 ctcgccatggcgagttcaggt-cagattcccaaagtttcattctaaaatctatccaggttcaatctcattct 243  Q
    ||||||||||||||||||||| ||| ||| |||| |||||||||||| ||| ||||||||||||||||||||    
T  132989 ctcgccatggcgagttcaggttcag-ttcacaaaatttcattctaaagtctttccaggttcaatctcattct 133059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 246
Target Start/End: Original strand, 4760 - 4932
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttttaactaggtcactcgcgaggcgaga-------c 173  Q
    ||||| |||||||||||||| ||| |||||||| |||||| ||||||||||||||    ||||| | |  || |||  || |||||||||||       |    
T  4760 ctacctcaaggttcaactcttaacaactcgtgcaacaaaggtcgcaaaatcctaacatggcattctgtttctgggtagcttgcgaggcgagagcctttgc 4859  T
Q  174 tcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattctaca 246  Q
    |||||||||||||  |||||| |||   ||||  ||||||||||||||| | |||||||||||||||||||||    
T  4860 tcgccatggcgaggacaggtctgatcgacaaaagttcattctaaaatcttttcaggttcaatctcattctaca 4932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 243
Target Start/End: Original strand, 101731 - 101800
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcattct 243  Q
    |||||||||||||||||||||||  ||| |||| || ||||||||| ||| ||||||||||||||||||||    
T  101731 ctcgccatggcgagttcaggtcaagttcacaaaatt-cattctaaagtctctccaggttcaatctcattct 101800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 12593 - 12518
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattc-ccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||   ||| ||||||||||||||||| ||||||||    
T  12593 ctcgccatggcgagttcag-tcagattctccaaagtttcattctatg-tctttccaggttcaatctcatcctacattc 12518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 10247 - 10322
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattc-ccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||||||||||||||| |||||||| |||||||||| ||||||  ||| ||||||||||||||||| ||||||||    
T  10247 ctcgccatggcgagttcag-tcagattctccaaagtttccttctaag-tctttccaggttcaatctcatcctacattc 10322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 80116 - 80041
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattc-ccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||||| ||||||||| |||||||| |||||||||||||||||  ||| ||||||||||||||||| ||||||||    
T  80116 ctcgccatgtcgagttcag-tcagattctccaaagtttcattctaag-tctttccaggttcaatctcatcctacattc 80041  T

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Target: scaffold1984 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 243
Target Start/End: Original strand, 434 - 536
Alignment:
Q  148 taactaggtcactcgcgaggcgaga-------ctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccaggttcaatctcat 240  Q
    ||||| |||||||||||||||||||       |||||||||||||||||||||   | || ||||  ||||||||||||||| |||| ||||||||||||    
T  434 taactgggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtgcaactcacaaaaattcattctaaaatctttccaagttcaatctcat 533  T
Q  241 tct 243  Q
    |||    
T  534 tct 536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 16801 - 16745
Alignment:
Q  84 ccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    |||||||||| | |||| ||| |||||||||||||||||||||||| ||||||||||    
T  16801 ccccaaggtttatctcttaacaactcgtgcgacaaagatcgcaaaaccctaaacaag 16745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 25961 - 25905
Alignment:
Q  84 ccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    |||||||||| | |||| ||| |||||||||| ||||||||||||| ||||||||||    
T  25961 ccccaaggtttatctcttaacaactcgtgcgataaagatcgcaaaaccctaaacaag 25905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 172
Target Start/End: Complemental strand, 60598 - 60506
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaa-gcattttttaactaggtcactcgcgaggcgaga 172  Q
    |||||||||||||||||||  |||  ||||||||||||||||| ||||| ||||||||| | ||| | ||||| ||  |||||||||||||||    
T  60598 ctaccccaaggttcaactcataacatctcgtgcgacaaagatcacaaaaccctaaacaatgtattctgtaactgggaaactcgcgaggcgaga 60506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 244
Target Start/End: Original strand, 130154 - 130314
Alignment:
Q  93 tcaactctcaacgactcgtgcgacaaagatcgca-aaatcctaaacaa-gcattttttaactaggtcactcgcgaggcgaga-------ctcgccatggc 183  Q
    ||||||| || | |||||||||||||||||||||   ||||||||||| ||||||| ||||||| |  ||||||||||||||       |||||||||||    
T  130154 tcaactcacatcaactcgtgcgacaaagatcgcatttatcctaaacaaggcattttgtaactagttagctcgcgaggcgagagcctctgctcgccatggc 130253  T
Q  184 gagttcaggtcagattcccaaagtttcattctaaaatcta-tccaggttcaatctcattcta 244  Q
    ||||| ||||   |||||||||  | |||||| ||| ||| |||||||||||||||| ||||    
T  130254 gagtttaggtgtaattcccaaaaatccattcttaaa-ctattccaggttcaatctcaatcta 130314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0356 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0356
Description:

Target: scaffold0356; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 140
Target Start/End: Complemental strand, 545 - 486
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    ||||||||||| |||||||  |||  ||||||||||||||||||||||| ||||||||||    
T  545 ctaccccaaggatcaactcgtaacatctcgtgcgacaaagatcgcaaaaccctaaacaag 486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 140
Target Start/End: Complemental strand, 29307 - 29248
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    ||||||||||| |||||||  |||  ||||||||||||||||||||||| ||||||||||    
T  29307 ctaccccaagggtcaactcataacatctcgtgcgacaaagatcgcaaaaccctaaacaag 29248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 140
Target Start/End: Original strand, 85782 - 85841
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    ||||||||||| |||||||  |||  ||||||||||||||||||||||| ||||||||||    
T  85782 ctaccccaaggatcaactcgtaacatctcgtgcgacaaagatcgcaaaaccctaaacaag 85841  T

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Target: scaffold0627 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 247 - 316
Alignment:
Q  180 tggcgagttcaggtcagat-tcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||||||||||||||  ||  |||||||||||||||| ||| ||||||||||||||||| ||||||||    
T  247 tggcgagttcaggtcagaactcaaaaagtttcattctaaa-tctttccaggttcaatctcatcctacattc 316  T

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Target: scaffold0475 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 249
Target Start/End: Original strand, 9411 - 9488
Alignment:
Q  172 actcgccatggcgagttcaggt-cagattcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||||||||||||||||||| ||| ||| ||||  ||||||||||| ||| ||||||| |||||||| |||||||||    
T  9411 actcgccatggcgagttcaggttcag-ttcacaaaaattcattctaaactctttccaggtccaatctcactctacattc 9488  T

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Target: scaffold0120 (Bit Score: 35; Significance: 0.00000000009; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 16324 - 16378
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 135  Q
    ||||| |||||||||||||||||| |||||||| |||||| |||||||| |||||    
T  16324 ctacctcaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaa 16378  T

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Target: scaffold0120; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 32843 - 32789
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 135  Q
    |||||||||||||||||||| ||| | | |||||||| |||||||||||||||||    
T  32843 ctaccccaaggttcaactcttaacaattggtgcgacacagatcgcaaaatcctaa 32789  T

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Target: scaffold0120; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 46162 - 46216
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 135  Q
    |||||||||||||||||||| ||| | | |||||||| |||||||||||||||||    
T  46162 ctaccccaaggttcaactcttaacaattggtgcgacacagatcgcaaaatcctaa 46216  T

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Target: scaffold0100 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 20455 - 20524
Alignment:
Q  180 tggcgagttcaggtcagat-tcccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||| ||||||||||  ||| |||||||||||||||| ||| |||||||||||||| |||||||||||    
T  20455 tggcgagctcaggtcagaactccaaaagtttcattctaaa-tctttccaggttcaatcttattctacattc 20524  T

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Target: scaffold0077 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 139
Target Start/End: Complemental strand, 55568 - 55510
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaa 139  Q
    ||||||||||| |||||||  |||  ||||||||||||||||||||||| |||||||||    
T  55568 ctaccccaagggtcaactcataacatctcgtgcgacaaagatcgcaaaaccctaaacaa 55510  T

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Target: scaffold0076 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 139
Target Start/End: Complemental strand, 24481 - 24423
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaa 139  Q
    ||||||||||| |||||||  |||  ||||||||||||||||||||||| |||||||||    
T  24481 ctaccccaaggatcaactcataacatctcgtgcgacaaagatcgcaaaaacctaaacaa 24423  T

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Target: scaffold0347 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 365 - 440
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattc-ccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||||  | | ||||||||||||||||| ||||||||    
T  365 ctcgccatggcgagttcag-tcagattctccaaagttccattctaag-tatttccaggttcaatctcatcctacattc 440  T

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Target: scaffold0266 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 204 - 249
Target Start/End: Complemental strand, 18712 - 18667
Alignment:
Q  204 aagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||||||||| ||||| ||||||||||||||||| ||||||||    
T  18712 aagtttcattctacaatctttccaggttcaatctcatcctacattc 18667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 9618 - 9543
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattc-ccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||||| ||||||||| |||||||| |||||||||||||||||  ||| ||||| ||||||||||| ||||||||    
T  9618 ctcgccatgacgagttcag-tcagattctccaaagtttcattctaag-tctttccagattcaatctcatcctacattc 9543  T

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Target: scaffold0161 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 2229 - 2154
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattccc-aaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||||||||||||| |||||||||| | ||| |||||||||||  ||| | ||||||||||||||||||||||||    
T  2229 ctcgccatggcgagttc-ggtcagattctctaaattttcattctaag-tcttttcaggttcaatctcattctacattc 2154  T

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Target: scaffold0075 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 8078 - 8003
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattc-ccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||||||||||||| | | |||||| |||||||||||||||||  ||| ||||||||||||||||| ||||||||    
T  8078 ctcgccatggcgagttctgtt-agattctccaaagtttcattctaag-tctttccaggttcaatctcatcctacattc 8003  T

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Target: scaffold0628 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 243
Target Start/End: Complemental strand, 2588 - 2518
Alignment:
Q  172 actcgccatggcgagttcaggt-cagattcccaaagtttcattctaaaatctatccaggttcaatctcattct 243  Q
    |||||||||||||||||||||| ||| ||| |||| |||||||||||||||| | ||||||||| ||||||||    
T  2588 actcgccatggcgagttcaggttcag-ttcacaaa-tttcattctaaaatctttacaggttcaaactcattct 2518  T

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Target: scaffold0260 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 141
Target Start/End: Original strand, 8364 - 8424
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagc 141  Q
    ||||||||||| | |||||  |||  ||||||||||||||||||||||| |||||||||||    
T  8364 ctaccccaaggattaactcataacatctcgtgcgacaaagatcgcaaaaccctaaacaagc 8424  T

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Target: scaffold0001 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 243
Target Start/End: Original strand, 161020 - 161091
Alignment:
Q  172 actcgccatggcgagttcaggt-cagattcccaaagtttcattctaaaatctatccaggttcaatctcattct 243  Q
    |||||||||||||| ||||||| ||| ||| ||||  ||||||||||| ||| ||||||||||||||||||||    
T  161020 actcgccatggcgacttcaggttcag-ttcacaaaaattcattctaaagtctctccaggttcaatctcattct 161091  T

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Target: scaffold0780 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0780
Description:

Target: scaffold0780; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 140
Target Start/End: Complemental strand, 3211 - 3152
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    ||||||||||| |||||||  |||  |||||||||||||||| |||||| ||||||||||    
T  3211 ctaccccaaggatcaactcataacatctcgtgcgacaaagattgcaaaaccctaaacaag 3152  T

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Target: scaffold0395 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 847 - 704
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattttttaactaggtcactcgcgaggcgaga------- 172  Q
    ||||| ||||||||||||||||||  ||||||| |||||| ||| |||||||| |||||| |  | | |  ||||||||||| ||||||| ||           
T  847 ctacctcaaggttcaactctcaacagctcgtgcaacaaaggtcgaaaaatcct-aacaagactctctgtttctaggtcactcacgaggcgggaacctctg 749  T
Q  173 ctcgccatggcgagttcaggtcagattccca--aagtttcattct 215  Q
    ||||||||||||||||||||||||||| |||  ||||||||||||    
T  748 ctcgccatggcgagttcaggtcagatttccaacaagtttcattct 704  T

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Target: scaffold0102 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 208 - 243
Target Start/End: Original strand, 19637 - 19672
Alignment:
Q  208 ttcattctaaaatctatccaggttcaatctcattct 243  Q
    ||||||||||||||| ||||||||||||||||||||    
T  19637 ttcattctaaaatctttccaggttcaatctcattct 19672  T

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Target: scaffold0081 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 140
Target Start/End: Complemental strand, 4580 - 4521
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 140  Q
    ||||||||||| |||||||  |||  ||||||||||||||||| ||||| ||||||||||    
T  4580 ctaccccaaggatcaactcataacatctcgtgcgacaaagatcacaaaaacctaaacaag 4521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 2189 - 2239
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatc 131  Q
    |||||| |||||||||||||| || |||||||| |||||| ||||||||||    
T  2189 ctacccaaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatc 2239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 6847 - 6897
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatc 131  Q
    |||||| |||||||||||||| || |||||||| |||||| ||||||||||    
T  6847 ctacccaaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatc 6897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 11397 - 11347
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatc 131  Q
    |||||| |||||||||||||| || |||||||| |||||| ||||||||||    
T  11397 ctacccaaaggttcaactctctacaactcgtgcaacaaaggtcgcaaaatc 11347  T

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Target: scaffold0165 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 3816 - 3858
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattccca-aagtttcattc 214  Q
    ||||||||||||||||||||||||| ||||| |||||||||||    
T  3816 ctcgccatggcgagttcaggtcagaatcccacaagtttcattc 3858  T

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Target: scaffold0165; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 7880 - 7922
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattccca-aagtttcattc 214  Q
    ||||||||||||||||||||||||| ||||| |||||||||||    
T  7880 ctcgccatggcgagttcaggtcagaatcccacaagtttcattc 7922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 139
Target Start/End: Complemental strand, 9968 - 9910
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaa 139  Q
    ||||||||||| |||||||  |||  ||||||||||||||||||||||| ||| |||||    
T  9968 ctaccccaaggatcaactcataacatctcgtgcgacaaagatcgcaaaacccttaacaa 9910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 29064 - 28989
Alignment:
Q  173 ctcgccatggcgagttcaggtcagattccc-aaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    ||||||||||| ||||| |||||||||| | ||| |||||||||||  ||| || |||||||||||||||||||||||    
T  29064 ctcgccatggctagttc-ggtcagattctctaaattttcattctaag-tctttctaggttcaatctcattctacattc 28989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 24435 - 24360
Alignment:
Q  173 ctcgccatggcgagttcaggtcagatt-cccaaagtttcattctaaaatctatccaggttcaatctcattctacattc 249  Q
    |||||||||||||||||| ||||||||  ||||||||||||||| || ||| || |||||||||||||| ||| ||||    
T  24435 ctcgccatggcgagttca-gtcagattatccaaagtttcattct-aagtctttctaggttcaatctcatcctaaattc 24360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 22515 - 22571
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaac 137  Q
    ||||||||||| |||||||  |||  |||||||||||| |||||||||| |||||||    
T  22515 ctaccccaaggatcaactcataacatctcgtgcgacaaggatcgcaaaaccctaaac 22571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 137
Target Start/End: Complemental strand, 14004 - 13948
Alignment:
Q  81 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaac 137  Q
    ||||||||||| |||||||  |||  |||||||||||| |||||||||| |||||||    
T  14004 ctaccccaaggatcaactcataacatctcgtgcgacaaggatcgcaaaaccctaaac 13948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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