View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0755_low_167 (Length: 246)
Name: NF0755_low_167
Description: NF0755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF0755_low_167 |
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[»] chr6 (16 HSPs) |
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[»] chr2 (15 HSPs) |
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[»] scaffold0351 (1 HSPs) |
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[»] scaffold0106 (2 HSPs) |
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[»] chr7 (15 HSPs) |
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[»] scaffold0598 (1 HSPs) |
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[»] scaffold0032 (1 HSPs) |
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[»] chr1 (13 HSPs) |
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[»] chr4 (19 HSPs) |
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[»] scaffold0718 (1 HSPs) |
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[»] scaffold0113 (1 HSPs) |
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[»] scaffold0427 (1 HSPs) |
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[»] scaffold0456 (1 HSPs) |
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[»] scaffold0114 (2 HSPs) |
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[»] chr5 (19 HSPs) |
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[»] chr3 (23 HSPs) |
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[»] scaffold1842 (1 HSPs) |
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[»] scaffold0011 (2 HSPs) |
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[»] scaffold0064 (1 HSPs) |
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[»] scaffold0358 (2 HSPs) |
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[»] scaffold0490 (1 HSPs) |
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[»] scaffold0309 (1 HSPs) |
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[»] scaffold0193 (1 HSPs) |
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[»] scaffold0021 (1 HSPs) |
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[»] scaffold0145 (2 HSPs) |
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[»] scaffold0292 (2 HSPs) |
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[»] scaffold0042 (1 HSPs) |
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[»] scaffold0647 (1 HSPs) |
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[»] scaffold0016 (1 HSPs) |
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[»] scaffold0088 (1 HSPs) |
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[»] scaffold0231 (1 HSPs) |
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[»] scaffold0403 (1 HSPs) |
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[»] scaffold0235 (1 HSPs) |
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[»] scaffold0003 (1 HSPs) |
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[»] scaffold0484 (1 HSPs) |
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[»] scaffold0165 (2 HSPs) |
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[»] scaffold0141 (1 HSPs) |
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[»] scaffold0080 (1 HSPs) |
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[»] scaffold0049 (1 HSPs) |
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[»] scaffold0122 (2 HSPs) |
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[»] scaffold0034 (1 HSPs) |
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[»] scaffold0305 (1 HSPs) |
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[»] scaffold0130 (1 HSPs) |
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[»] scaffold0056 (1 HSPs) |
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[»] scaffold0026 (2 HSPs) |
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[»] scaffold0639 (1 HSPs) |
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[»] scaffold0175 (1 HSPs) |
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[»] scaffold0121 (1 HSPs) |
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[»] scaffold0217 (1 HSPs) |
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[»] scaffold0215 (1 HSPs) |
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[»] scaffold0228 (3 HSPs) |
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[»] scaffold0084 (1 HSPs) |
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[»] scaffold0540 (2 HSPs) |
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[»] scaffold0352 (1 HSPs) |
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[»] scaffold0029 (1 HSPs) |
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[»] scaffold1124 (1 HSPs) |
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[»] scaffold0210 (2 HSPs) |
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[»] scaffold0395 (1 HSPs) |
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[»] scaffold0070 (1 HSPs) |
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[»] scaffold0627 (1 HSPs) |
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[»] scaffold0839 (1 HSPs) |
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[»] scaffold0120 (3 HSPs) |
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[»] scaffold0327 (1 HSPs) |
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[»] scaffold0908 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 242; Significance: 1e-134; HSPs: 16)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 22831588 - 22831833
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat |
100 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
22831588 |
cataatcatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat |
22831687 |
T |
 |
Q |
101 |
atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa |
200 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
22831688 |
atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa |
22831787 |
T |
 |
Q |
201 |
tccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
22831788 |
tccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
22831833 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 16920666 - 16920423
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat |
100 |
Q |
|
|
||||| |||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| | |
|
|
T |
16920666 |
cataagtatatcaaattccattcatcaacatctta--tgtatacaaatattcttcaagtaatgcataaacattataccacatcataatcaacaacaactt |
16920569 |
T |
 |
Q |
101 |
atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa |
200 |
Q |
|
|
|||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |
|
|
T |
16920568 |
atcttattcagcttcatagattatagttaacctcattcttaagtcttaattctacccaagggttcaactctcgagaaatcgtgcaacaaaggtcgcaaaa |
16920469 |
T |
 |
Q |
201 |
tccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||||||||||| ||||||| |||||||||| |||||||||||| |
|
|
T |
16920468 |
tccaacaagtcactttgtttctgggtcactcgcaaggcgagagcct |
16920423 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 11185590 - 11185833
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat |
100 |
Q |
|
|
||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||| |
|
|
T |
11185590 |
cataattatatcaaattcaattcatcagcatcttt--tgtatacaaacattcttcaagtaatgcataaactttataacacttcataatcagcaacaacat |
11185687 |
T |
 |
Q |
101 |
atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa |
200 |
Q |
|
|
|||||||||| |||||||||||| |||||||||| | | |||||||||| |||||||||||| | | |||||| | | ||| ||||||||||||||| |
|
|
T |
11185688 |
atcttattcatcttcacagattacggttaacctcactattaagtcttaatcctacccaagggtccgatcctcgacaacccatgcaacaaaggtcgcaaaa |
11185787 |
T |
 |
Q |
201 |
tccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|| ||||||||||| ||||||| |||||||| ||||||||| |||| |
|
|
T |
11185788 |
tctaacaagtcactatgtttctgggtcactcacgaggcgagggcct |
11185833 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 20360994 - 20360750
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||| | |||||||||||||||||| || || |||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||| |
|
|
T |
20360994 |
cataataatatcaattgcaattcatcaacatcttaaat--attcaaatattcttcaagtaatgcatataacattatatcacatcataatcaacaacaaca |
20360897 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| |||||||||| |||||| |||||||||| | |||||||||| |||||||| ||||||| ||| || | |||||| |||||||||||||| |
|
|
T |
20360896 |
catcttaaacagcttcacatattataattaacctcatcattaagtcttaatactacccaaaggttcaatcctcaacaactcgtgcaacaaaggtcgcaaa |
20360797 |
T |
 |
Q |
200 |
atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
| | ||||||||||||||||||| ||||||||||||||||||||||| |
|
|
T |
20360796 |
acctaacaagtcactctgtttctgggtcactcgcgaggcgagagcct |
20360750 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 20638317 - 20638073
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaa-cattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||| | ||||| ||||||||||| || || |||||||||||||||||||||||||| | ||||| |||||||||||||||| ||||| |
|
|
T |
20638317 |
cataataatatcaattgcaatttatcaacatctttaat--attcaaacattcttcaagtaatgcataaaacgttatatcacatcataatcaacatcaaca |
20638220 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| ||||||||||||||||| ||||| |||| | |||||||||| || || | ||||||||||||||| | |||||| |||||||||||||| |
|
|
T |
20638219 |
catcttaaacagcttcacagattataattaacatcatcattaagtcttaatgttatcccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaa |
20638120 |
T |
 |
Q |
200 |
atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||| |||||| |||||||||||| |||||||||||||| |||||||| |
|
|
T |
20638119 |
atctaacaaggcactctgtttctgggtcactcgcgaggtgagagcct |
20638073 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 53 - 246
Target Start/End: Complemental strand, 25629339 - 25629144
Alignment:
Q |
53 |
ttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaatt |
151 |
Q |
|
|
|||||||||||| || ||||||||| |||||||||||||||| ||||| |||||| ||||||||||||||||| ||||| ||| | |||||| ||| |
|
|
T |
25629339 |
ttcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacaacatcattaagtctcaata |
25629240 |
T |
 |
Q |
152 |
ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||| | ||||||||||| || | |||||| ||||| |||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| |
|
|
T |
25629239 |
ctaccccaaggttcaactcttaacaactcgtgcaacaaaagtcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcct |
25629144 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 29060627 - 29060872
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||||| ||| ||| |||||||| | ||||||| ||| ||||||||||||| | ||||||||| | |||||||||||||| ||||| |
|
|
T |
29060627 |
cataataatatcaaatgcaagtcaacaacatctcaa--gtatacattcataattcaagtaatgcacataacattatatctcatcataatcaacatcaaca |
29060724 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| ||||||||||||||||| |||| |||| | |||||| ||| |||||| | |||||| |||| | | |||||| |||||||||||||| |
|
|
T |
29060725 |
catcttaaacagcttcacagattataattaatatcatcattaagtctcaatactaccccaaggttcagctcttagcaactcgtgcaacaaaggtcgcaaa |
29060824 |
T |
 |
Q |
200 |
atcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||| |||||| |||||||||||| ||||||||||||||||||||||| |
|
|
T |
29060825 |
atcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcct |
29060872 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 68 - 246
Target Start/End: Complemental strand, 18409795 - 18409616
Alignment:
Q |
68 |
aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaa |
167 |
Q |
|
|
||||||||| |||||||||||||||| ||||| |||||| |||||||||| |||||| ||||| |||| | |||||| ||| |||||| | ||||||| |
|
|
T |
18409795 |
aacattatatcacatcataatcaacatcaacacatcttaaacagcttcacatattataattaacatcatcattaagtctcaatactaccctaaggttcaa |
18409696 |
T |
 |
Q |
168 |
ctctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||||| | | |||||| |||||||||| ||||||| |||||| |||||||||||| ||||||| | ||||||||||||| |
|
|
T |
18409695 |
ctctcaataactcgtgcaacaaaggtcgtaaaatcctaacaaggcactctgtttctgggtcactagagaggcgagagcct |
18409616 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 139 - 246
Target Start/End: Complemental strand, 18821716 - 18821609
Alignment:
Q |
139 |
tcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggc |
238 |
Q |
|
|
|||||||||||| |||||| | ||||||||||||||| | |||||| ||||||||||||||||| ||||||||||||||||||| |||| |||||||||| |
|
|
T |
18821716 |
tcaagtcttaatgctaccccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcgctcgcgaggc |
18821617 |
T |
 |
Q |
239 |
gagagcct |
246 |
Q |
|
|
|||||||| |
|
|
T |
18821616 |
gagagcct |
18821609 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 20593860 - 20594105
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||||| ||| ||| |||||||| | || ||||||| ||| ||||||||||| || |||| |||| |||||||||||||||| ||||| |
|
|
T |
20593860 |
cataataatatcaaatgcaagtcaacaacatctca-at-tatacaatcataaatcaagtaatgcgtataacaatatatcacatcataatcaacatcaaca |
20593957 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| ||||||||||||||||| ||| | | || | |||||| ||| |||||| | |||||||| || || | | |||||||| || ||||||| |
|
|
T |
20593958 |
catcttaaacagcttcacagattataattatcattatcattaagtctcaatactaccccaaggttcaacccttaacaacttgtgcgacacagatcgcaaa |
20594057 |
T |
 |
Q |
200 |
atcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||| |||||| |||||||||||| ||||||||||||||||||||||| |
|
|
T |
20594058 |
atcctaacaaggcactctgtttctaggtcactcgcgaggcgagagcct |
20594105 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 52 - 246
Target Start/End: Complemental strand, 22780212 - 22780017
Alignment:
Q |
52 |
cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat |
150 |
Q |
|
|
|||||||||||||| ||||||||| |||| ||||||||||| ||||| |||||| |||||||||||||||| ||||| |||| | ||||||| || |
|
|
T |
22780212 |
cttcaagtaatgcacgcaacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattatgattaacatcatcattaagtctttat |
22780113 |
T |
 |
Q |
151 |
tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||| | ||||||||||||| | | | |||| ||||||||| ||||| | |||| | |||||||||||| ||| ||||||||||||||||||| |
|
|
T |
22780112 |
actaccccaaggttcaactctcggcaacttgtgcaacaaaggtcacaaaacctaacaggacactctgtttctaggttactcgcgaggcgagagcct |
22780017 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 68 - 246
Target Start/End: Complemental strand, 19303509 - 19303330
Alignment:
Q |
68 |
aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaa |
167 |
Q |
|
|
||||||||| |||||||||||||||| ||||| ||||| ||||||||||||||||| ||||| |||| | || ||| | | |||||| | ||||||| |
|
|
T |
19303509 |
aacattatatcacatcataatcaacatcaacacatcttcaacagcttcacagattataattaacatcatcattaattctcagtgctaccccaaggttcaa |
19303410 |
T |
 |
Q |
168 |
ctctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||| | | | |||||||| || ||||||||||| |||||| |||||||||||| |||||||| |||||||||||||| |
|
|
T |
19303409 |
ctcttagcaacttgtgcgacatagatcgcaaaatcctaacaaggcactctgtttctgggtcactctcgaggcgagagcct |
19303330 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 35245671 - 35245758
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatca |
90 |
Q |
|
|
|||||| ||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||| ||||||||||||| |
|
|
T |
35245671 |
cataataatatcaatttcaattcatcaacatctta--tgtatacaaatattcttcaagtaatgcataatcattatatcacatcataatca |
35245758 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 52 - 246
Target Start/End: Complemental strand, 17287781 - 17287586
Alignment:
Q |
52 |
cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat |
150 |
Q |
|
|
|||||||||||||| | |||||||| || | |||||||||| ||||| |||||| ||||||||||| ||||| ||||| || | | |||||| ||| |
|
|
T |
17287781 |
cttcaagtaatgcacataacattatgtcataacataatcaacctcaacacatcttaaacagcttcacaggttataattaacatcctcattaagtctcaat |
17287682 |
T |
 |
Q |
151 |
tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||| | |||||||||||| || | |||||| |||||| | ||||| | |||||| |||||||||||| |||||||| |||| | ||||||| |
|
|
T |
17287681 |
gctaccccaaggttcaactctcaacaactcgtgcaacaaagatagcaaaccctaacaagacactctgtttctgggtcactcacgagacaagagcct |
17287586 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Original strand, 18456961 - 18457003
Alignment:
Q |
161 |
ggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc |
203 |
Q |
|
|
|||||||||||| |||| ||||||||||||| ||||||||||| |
|
|
T |
18456961 |
ggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcc |
18457003 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 171
Target Start/End: Complemental strand, 25603370 - 25603250
Alignment:
Q |
52 |
cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat |
150 |
Q |
|
|
|||||||||||| ||| ||||| ||| |||||||||||||| || | | |||||| |||||||||||||| || | ||| || | | ||||||||| |
|
|
T |
25603370 |
cttcaagtaatgtatacaacatcatatcacatcataatcaatgactaaacatcttaaacagcttcacagattctattaaacatcgtcattaagtcttaaa |
25603271 |
T |
 |
Q |
151 |
tctacccaagggttcaactct |
171 |
Q |
|
|
|||||||| ||||||||||| |
|
|
T |
25603270 |
gctacccaaaggttcaactct |
25603250 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 199; Significance: 1e-108; HSPs: 15)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 20309193 - 20309436
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
20309193 |
cataattatatcaaattcaattcatcaacatctta--tgtatacaaatattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat |
20309290 |
T |
 |
Q |
101 |
atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa |
200 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||| |||| |||||||||| |
|
|
T |
20309291 |
atcttattcagcttcacagattatagttaacctcattcttaagtcttaatcctacccaagggttcaactctcgacaaatcgtgcaacaagggtcgcaaaa |
20309390 |
T |
 |
Q |
201 |
tccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|| ||||||||||| ||||||| ||||||||||||||||||||||| |
|
|
T |
20309391 |
tctaacaagtcactttgtttctgggtcactcgcgaggcgagagcct |
20309436 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 38149 - 37906
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat |
100 |
Q |
|
|
|||||| ||||||| ||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
T |
38149 |
cataataatatcaatttcgattcatcatcatctta--tgtatacaaacattcttcaagtaatgcataaacattatatcacatcataatcaacaacaacat |
38052 |
T |
 |
Q |
101 |
atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa |
200 |
Q |
|
|
|||||| |||||||| |||||||| ||||||||||| | |||||||||| |||||||| ||||||||||||||| | |||||| |||||||||||||| |
|
|
T |
38051 |
gtcttatacagcttcagagattataattaacctcattgttaagtcttaatcctacccaaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaag |
37952 |
T |
 |
Q |
201 |
tccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|| ||||||||||| ||||||| |||| |||||||||||||||||| |
|
|
T |
37951 |
tctaacaagtcactatgtttctgggtcgctcgcgaggcgagagcct |
37906 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 23285948 - 23286192
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaa-cattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||| | |||||||||||||||||| || || |||| |||||||||||||||||||| ||||||| |||||||||||||||||||||| |
|
|
T |
23285948 |
cataataatatcaattgcaattcatcaacatcttaaat--attcaaatgttcttcaagtaatgcataaaacattatatcacatcataatcaacaacaaca |
23286045 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| ||||||||||||||||| ||||| || | | |||||||||| |||||||| |||||||||||| || | || ||| |||||||||||||| |
|
|
T |
23286046 |
catcttaaacagcttcacagattataattaacatcttcattaagtcttaatactacccaaaggttcaactctcaacaactcatgcaacaaaggtcgcaaa |
23286145 |
T |
 |
Q |
200 |
atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||| ||||||||||||||||||| ||||||||||||||||||||||| |
|
|
T |
23286146 |
atctaacaagtcactctgtttctaggtcactcgcgaggcgagagcct |
23286192 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 23654420 - 23654188
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaa-cattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||| | |||||||||||||||||| || || ||| ||| |||||||||||||||| ||||||| ||||||||||| |||||||||| |
|
|
T |
23654420 |
cataataatatcaattgcaattcatcaacatcttaaat--attcaagtattactcaagtaatgcataaaacattatatcacatcataattaacaacaaca |
23654323 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| ||||||||||||||||| |||||||| | | |||||||||| |||||||| ||||||||||||||| | |||||| |||||||||||||| |
|
|
T |
23654322 |
catcttaaacagcttcacagattataattaacctcttcattaagtcttaatgctacccaaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaa |
23654223 |
T |
 |
Q |
200 |
atccaacaagtcactctgtttctcggtcactcgcg |
234 |
Q |
|
|
||| ||||||||||||||||||| ||||||||||| |
|
|
T |
23654222 |
atctaacaagtcactctgtttctgggtcactcgcg |
23654188 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 22738214 - 22737970
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||| | |||||||||||||||||| || || |||| ||||||||||||||||| | ||||||||| |||||||||||||||| ||||| |
|
|
T |
22738214 |
cataataatatcaattgcaattcatcaacatcttaaat--attcaaatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaaca |
22738117 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| ||||||||||||||||| ||||| || | | |||||||||| |||||| | ||||||| |||| || | |||||| |||||||||||||| |
|
|
T |
22738116 |
catcttaaacagcttcacagattataattaacatcctcattaagtcttaatactaccccaaggttcaattctcaacaactcgtgcaacaaaggtcgcaaa |
22738017 |
T |
 |
Q |
200 |
atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
| | |||||| |||||||||||| ||||||||||||||||||||||| |
|
|
T |
22738016 |
acctaacaaggcactctgtttctaggtcactcgcgaggcgagagcct |
22737970 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 298848 - 298604
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaa-cattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
||||| |||||||| | ||||||| |||||||||| || || |||| | | |||||||||||||||| ||||||| ||||||||||| || ||||||| |
|
|
T |
298848 |
cataaatatatcaattgcaattcaacaacatcttaaat--attcaaataattctcaagtaatgcataaaacattatatcacatcataattaataacaaca |
298751 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
||||||| |||||||||| ||||||||||||||| | | |||||||||| |||||||| |||| || ||| || | |||||| |||||||||||||| |
|
|
T |
298750 |
catcttatacagcttcacatattatagttaacctcttcattaagtcttaatgctacccaaaggtttaatcctcaacaactcgtgcaacaaaggtcgcaaa |
298651 |
T |
 |
Q |
200 |
atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||| ||||||||||||||||||| ||||||||||||||||||||||| |
|
|
T |
298650 |
atctaacaagtcactctgtttctgggtcactcgcgaggcgagagcct |
298604 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 53 - 246
Target Start/End: Original strand, 22337252 - 22337447
Alignment:
Q |
53 |
ttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaatt |
151 |
Q |
|
|
|||||||||||| || ||||||||| |||||||||||||||| |||||||||||| || ||||||| |||||| ||||| |||| | |||||||||| |
|
|
T |
22337252 |
ttcaagtaatgcgtataacattatatcacatcataatcaacatcaacatatcttaaacaacttcacaaattataattaacatcatcattaagtcttaata |
22337351 |
T |
 |
Q |
152 |
ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||| | | |||||||||||| || | |||||| ||||||||| ||||| || |||||| | |||||||||| ||||||||||||||||||||||| |
|
|
T |
22337352 |
ctactccaaggttcaactctcaacaactcgtgcaacaaaggtcacaaaaacctaacaagactctctgtttctgggtcactcgcgaggcgagagcct |
22337447 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 22731268 - 22731023
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||| | |||||||||||||| ||| || || |||| ||||||||||||||||| | ||||||||| |||||||||||||||| ||||| |
|
|
T |
22731268 |
cataataatatcaattgcaattcatcaacatattaaat--attcaaatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaaca |
22731171 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattcta-cccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaa |
198 |
Q |
|
|
|||||| ||||||||||||||||| ||||| || | | |||||||||| ||| ||| | ||||||| | || || |||||| |||||| |||||| |
|
|
T |
22731170 |
catcttaaacagcttcacagattataattaacatcctcattaagtcttaatactacccccaaggttcaattatcaacagctcgtgcaacaaagatcgcaa |
22731071 |
T |
 |
Q |
199 |
aatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|| | |||||| |||||||||||| ||| ||||| ||||||||||||| |
|
|
T |
22731070 |
aacctaacaaggcactctgtttctgggtgactcgtgaggcgagagcct |
22731023 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 70 - 246
Target Start/End: Original strand, 27753730 - 27753906
Alignment:
Q |
70 |
cattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaact |
169 |
Q |
|
|
||||||| |||||||||||||||| ||||| |||||| ||| |||||| |||||| ||||| |||| | |||||||||| ||| || | | ||||||| |
|
|
T |
27753730 |
cattatatcacatcataatcaacatcaacacatcttaaacagtttcacatattataattaacatcatcattaagtcttaatgctatcccaagcttcaact |
27753829 |
T |
 |
Q |
170 |
ctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||| | |||||| || |||||||||||||| |||||| |||||||||||| ||||||| ||||||||||||||| |
|
|
T |
27753830 |
ctcgacaactcgtgcaacgaaggtcgcaaaatctaacaaggcactctgtttctgggtcacttgcgaggcgagagcct |
27753906 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 52 - 246
Target Start/End: Original strand, 23076578 - 23076773
Alignment:
Q |
52 |
cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat |
150 |
Q |
|
|
|||||||||||||| | ||||||||| |||||||||||||||| ||||| | |||| ||||||||||||||||| ||||| |||| | || || ||| |
|
|
T |
23076578 |
cttcaagtaatgcacataacattatatcacatcataatcaacatcaacacagcttaaacagcttcacagattataattaacatcatcataaaatcccaat |
23076677 |
T |
 |
Q |
151 |
tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||| | ||||||||||| || | |||||| ||||||||||||||| | |||||| |||||||||||| ||| ||||||||||||||||||| |
|
|
T |
23076678 |
actaccccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaacctaacaaggcactctgtttctgggtaactcgcgaggcgagagcct |
23076773 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 52 - 246
Target Start/End: Complemental strand, 32451913 - 32451719
Alignment:
Q |
52 |
cttcaagtaatgcataaacattataacacatcataa-tcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat |
150 |
Q |
|
|
||||||||||||| || |||| ||| |||||||||| |||||| ||||| | || |||||||||| ||| || |||| |||| |||||||||||| |
|
|
T |
32451913 |
cttcaagtaatgcgtatacataatatcacatcataaatcaacattaacatcccataa-cagcttcacaaattgtaattaatatcatattcaagtcttaat |
32451815 |
T |
 |
Q |
151 |
tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||| | |||||| |||||||| | |||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |
|
|
T |
32451814 |
gctaccccaaggttcatctctcgacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcactcgcgaggcgagagcct |
32451719 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 23660109 - 23660354
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||||| ||| ||| |||||||||| || || ||| ||| ||||||||||| || ||||||||| |||||||||||||||| ||||| |
|
|
T |
23660109 |
cataataatatcaaatgcaaatcaacaacatcttaaat--attcaatcataactcaagtaatgcgtataacattatatcacatcataatcaacatcaaca |
23660206 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| |||||| ||| |||||| ||||| |||| |||||| ||| |||||| | |||||||||||| | | |||||| | ||||||| |||| |
|
|
T |
23660207 |
catcttaaacagctttacaaattataattaacatcatcaataagtctcaatactaccccaaggttcaactctcaataactcgtgcaataaaggtcacaaa |
23660306 |
T |
 |
Q |
200 |
atcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
| || |||||| |||||||||||| |||||||| |||||||||||||| |
|
|
T |
23660307 |
aacctaacaaggcactctgtttctgggtcactcacgaggcgagagcct |
23660354 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 40622244 - 40622114
Alignment:
Q |
2 |
ataattatatcaaattcaattcatcaacatcttagatgta---tacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaac |
98 |
Q |
|
|
||||||||||||| |||||||||||||||||||| | || |||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||| |
|
|
T |
40622244 |
ataattatatcaa-ttcaattcatcaacatcttatgtatacagtacaaatattcttcaagtaatgcataaacattataatacatcataatcaacacaaac |
40622146 |
T |
 |
Q |
99 |
atatcttattcagcttcacagattatagttaac |
131 |
Q |
|
|
|| || || |||||||||||||| ||||||| |
|
|
T |
40622145 |
atctcata-acagcttcacagattgcagttaac |
40622114 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 52 - 219
Target Start/End: Original strand, 23060649 - 23060815
Alignment:
Q |
52 |
cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat |
150 |
Q |
|
|
|||||||||||||| | ||||||||| |||||||||||||||| ||||| |||||| |||||||||| |||||| ||||| |||| | ||||| ||| |
|
|
T |
23060649 |
cttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcaca-attataattaacatcatcattaagtcccaat |
23060747 |
T |
 |
Q |
151 |
tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtt |
219 |
Q |
|
|
|||||| | |||||| |||| || | ||||| ||||||||||||||| | |||||| ||||||||| |
|
|
T |
23060748 |
actaccccaaagttcaattctcaacaactcgtg-aacaaaggtcgcaaaacctaacaaggcactctgtt |
23060815 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 33
Target Start/End: Complemental strand, 23103427 - 23103399
Alignment:
Q |
5 |
attatatcaaattcaattcatcaacatct |
33 |
Q |
|
|
||||||||||||||||||||||||||||| |
|
|
T |
23103427 |
attatatcaaattcaattcatcaacatct |
23103399 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0351 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: scaffold0351
Description:
Target: scaffold0351; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 16367 - 16610
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat |
100 |
Q |
|
|
||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
16367 |
cataattatatcaaattcaattcatcaacatatta--tgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat |
16464 |
T |
 |
Q |
101 |
atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa |
200 |
Q |
|
|
||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| ||||||||||||| |||||||| ||||||||| ||||| |
|
|
T |
16465 |
atcttattcagcttcacagattatagttaacctcattattaagtcttaatcctacccaagcgttcaactctcgagaaatcgtgcaacaaaggtcacaaaa |
16564 |
T |
 |
Q |
201 |
tccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
T |
16565 |
tccaacaagtcactctgtttctaggtcactcgcgaggcgagagcct |
16610 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0106 (Bit Score: 195; Significance: 1e-106; HSPs: 2)
Name: scaffold0106
Description:
Target: scaffold0106; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 1374 - 1617
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
T |
1374 |
cataattatatcaaattcaattcatcaacatctta--tgtatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacat |
1471 |
T |
 |
Q |
101 |
atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa |
200 |
Q |
|
|
|||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||| | |||||| |||||||||||||| |
|
|
T |
1472 |
atcttattcagcttcatagattatagttaacctcattcttaagtcttaatcctacccaagggtccaactctcgacaactcgtgcaacaaaggtcgcaaac |
1571 |
T |
 |
Q |
201 |
tccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
T |
1572 |
tccaacaagtcactctgtttctaggtcactcgcgaggcgagagcct |
1617 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0106; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 2 - 246
Target Start/End: Original strand, 7352 - 7594
Alignment:
Q |
2 |
ataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacata |
101 |
Q |
|
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
T |
7352 |
ataattatatcaaattcaattcatcaacatctta--tgtatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacata |
7449 |
T |
 |
Q |
102 |
tcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaat |
201 |
Q |
|
|
||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||| | |||||| |||||||||||||| | |
|
|
T |
7450 |
tcttattcagcttcatagattatagttaacctcattcttaagtcttaatcctacccaagggtccaactctcgacaactcgtgcaacaaaggtcgcaaact |
7549 |
T |
 |
Q |
202 |
ccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
T |
7550 |
ccaacaagtcactctgtttctaggtcactcgcgaggcgagagcct |
7594 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 191; Significance: 1e-104; HSPs: 15)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 27847866 - 27847623
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
T |
27847866 |
cataattatatcaaattcaattcatcaacatctta--tgtatacaaacattcttcaagtaatgcataaacattatcacacatcataatcaacaacaacat |
27847769 |
T |
 |
Q |
101 |
atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa |
200 |
Q |
|
|
|||||||||||||||||||||||||||||| |||||| | |||||||||| |||||||||||||||||||||||| | |||||| ||||||||||||||| |
|
|
T |
27847768 |
atcttattcagcttcacagattatagttaatctcattattaagtcttaatcctacccaagggttcaactctcgacaactcgtgcaacaaaggtcgcaaaa |
27847669 |
T |
 |
Q |
201 |
tccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|| ||||||||||||||||| | ||||||||||||||||||||||| |
|
|
T |
27847668 |
tctaacaagtcactctgtttttgggtcactcgcgaggcgagagcct |
27847623 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 40443477 - 40443720
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat |
100 |
Q |
|
|
|||||| ||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||| |
|
|
T |
40443477 |
cataataatatcaatttcaattcatcaacatcttag--gtatacaaatattcttcaagtaatgcataaacattatatcacatcataatcaacaacgacat |
40443574 |
T |
 |
Q |
101 |
atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa |
200 |
Q |
|
|
||||||| ||||||||||||||||| ||||||||||| | |||||||||| ||||||||||||||| |||||||| | |||||| ||||||||||||||| |
|
|
T |
40443575 |
atcttatacagcttcacagattataattaacctcattgttaagtcttaatcctacccaagggttcatctctcgacaactcgtgcaacaaaggtcgcaaaa |
40443674 |
T |
 |
Q |
201 |
tccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||||| |||||||||||||||| ||||||||||||||||||||||| |
|
|
T |
40443675 |
tccaataagtcactctgtttctgggtcactcgcgaggcgagagcct |
40443720 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 10589126 - 10589369
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat |
100 |
Q |
|
|
|||||| ||||||| | ||||||| ||||||||| |||| |||| |||||||||| ||||||||||||||||| ||||||||||||| |||||||| |
|
|
T |
10589126 |
cataatcatatcaattgcaattcaacaacatcttcaatgtt--caaatattcttcaagcaatgcataaacattatatcacatcataatcagcaacaacac |
10589223 |
T |
 |
Q |
101 |
atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa |
200 |
Q |
|
|
|||||| |||||||||||||||| |||||||||| | |||||||||| |||||||| ||| ||||||| ||| | |||||| | ||||||||||||| |
|
|
T |
10589224 |
atcttaaatagcttcacagattataattaacctcatcattaagtcttaatcctacccaaaggtccaactctagacaactcgtgcaaaaaaggtcgcaaaa |
10589323 |
T |
 |
Q |
201 |
tccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|| ||||||||||||||||||| ||||||||||||||||||||||| |
|
|
T |
10589324 |
tctaacaagtcactctgtttctgggtcactcgcgaggcgagagcct |
10589369 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 21 - 245
Target Start/End: Complemental strand, 16386261 - 16386038
Alignment:
Q |
21 |
ttcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaa-cattataacacatcataatcaacaacaacatatcttattcagcttcacag |
119 |
Q |
|
|
||||||||||||||| || || |||||| | |||||||||||||||| ||||||| ||||||||||||||||||||| |||||| ||||||||||| |
|
|
T |
16386261 |
ttcatcaacatcttaaat--attcaaacaattctcaagtaatgcataaaacattatattacatcataatcaacaacaacacatcttaaacagcttcacag |
16386164 |
T |
 |
Q |
120 |
attatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtt |
219 |
Q |
|
|
||||||||||||||| | | |||||||||| ||||||| ||||||||||| ||| | || ||| ||||||||||||||||| |||||||||||||||| |
|
|
T |
16386163 |
attatagttaacctcttcattaagtcttaatgttacccaaaggttcaactctggacaactcatgcaacaaaggtcgcaaaatctaacaagtcactctgtt |
16386064 |
T |
 |
Q |
220 |
tctcggtcactcgcgaggcgagagcc |
245 |
Q |
|
|
||| |||||||||||||||||||||| |
|
|
T |
16386063 |
tctgggtcactcgcgaggcgagagcc |
16386038 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 9509276 - 9509520
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||| | |||||||||||||||||| || || |||| ||||||||||||||||| | |||| |||| |||||||||||||||| ||||| |
|
|
T |
9509276 |
cataataatatcaattgcaattcatcaacatcttaaat--attcaaatattcttcaagtaatgcacataacactatatcacatcataatcaacatcaaca |
9509373 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| ||||||||||||||||| ||||| || | | |||||||||| ||| || | ||||||||||||||| | || ||| |||||||||||||| |
|
|
T |
9509374 |
catcttaaacagcttcacagattataattaacatcctcattaagtcttaatgctatcccaaggttcaactctcgacaactcttgcaacaaaggtcgcaaa |
9509473 |
T |
 |
Q |
200 |
atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||| |||||| |||||||||||| ||||||||||||||||||||||| |
|
|
T |
9509474 |
atctaacaaggcactctgtttctgggtcactcgcgaggcgagagcct |
9509520 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 12698919 - 12699163
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||| | |||||||||||||||||| || || |||| ||||||||||||||||| | ||||||||| |||||||||||||||| ||||| |
|
|
T |
12698919 |
cataataatatcaattgcaattcatcaacatcttaaat--attcaaatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaaca |
12699016 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| ||||||||||||||||| ||||| || | | || ||||||| |||||| | ||||||||| ||||| | |||||| |||||||||||||| |
|
|
T |
12699017 |
catcttaaacagcttcacagattataattaacatcctcattaactcttaatactaccccaaggttcaactatcgacaactcgtgcaacaaaggtcgcaaa |
12699116 |
T |
 |
Q |
200 |
atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
| | ||||||||||| ||||||| |||||||| ||||| |||||||| |
|
|
T |
12699117 |
acctaacaagtcactttgtttctgggtcactcacgaggtgagagcct |
12699163 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 26212083 - 26212327
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaa-cattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||| | ||||||| |||||||||| || || |||| | | |||||||||||||||| ||||||| ||||| |||||||||||||||| |
|
|
T |
26212083 |
cataataatatcaattgcaattcaacaacatcttaaat--attcaaataattctcaagtaatgcataaaacattatatcacattataatcaacaacaaca |
26212180 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| ||||||||||||||||| |||||||| | | |||||||||| |||||||| |||| || ||| || | |||||| |||||||||||||| |
|
|
T |
26212181 |
catcttaaacagcttcacagattataattaacctcttcattaagtcttaatgctacccaaaggtttaatcctcaacaactcgtgcaacaaaggtcgcaaa |
26212280 |
T |
 |
Q |
200 |
atccaacaagtcactctg-tttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
| | ||||| |||||||| ||||| ||||||||||||||||||||||| |
|
|
T |
26212281 |
a-ctaacaaatcactctgttttctgggtcactcgcgaggcgagagcct |
26212327 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 244
Target Start/End: Complemental strand, 3564348 - 3564155
Alignment:
Q |
53 |
ttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaatt |
151 |
Q |
|
|
|||||||||||| || ||||||| | |||||||||||||||| ||||| |||||| || ||||| || ||||| ||||| |||| | |||||| ||| |
|
|
T |
3564348 |
ttcaagtaatgcgtataacattagatcacatcataatcaacatcaacacatcttaaacaacttcataggttataattaacatcatcattaagtctcaata |
3564249 |
T |
 |
Q |
152 |
ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagc |
244 |
Q |
|
|
|||||| | |||| |||||| || | |||||| |||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||| |
|
|
T |
3564248 |
ctaccccaaggttaaactcttaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcgagagc |
3564155 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 70 - 246
Target Start/End: Original strand, 38227635 - 38227812
Alignment:
Q |
70 |
cattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaact |
169 |
Q |
|
|
||||||| |||||| ||||||||| |||||||||||| | ||||||| |||||| ||||| |||| | |||||||||| |||||| | ||||||||| |
|
|
T |
38227635 |
cattatatcacatcttaatcaacatcaacatatcttaaatatcttcacatattataattaacatcatcattaagtcttaatactaccccaaggttcaact |
38227734 |
T |
 |
Q |
170 |
ctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|| || | |||||| ||||||||||||||| || |||||| |||||||||| | ||||||||||||||||||||||| |
|
|
T |
38227735 |
cttaacaactcgtgcaacaaaggtcgcaaaaacctaacaaggcactctgtttatgggtcactcgcgaggcgagagcct |
38227812 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 12187113 - 12187227
Alignment:
Q |
14 |
aattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagct |
113 |
Q |
|
|
|||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||| |||||||| ||||| ||||| ||||| |||||| |
|
|
T |
12187113 |
aattcaattcatcaacatctta--tgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaactcaaacatctctta-tcagct |
12187209 |
T |
 |
Q |
114 |
tcacagattatagttaac |
131 |
Q |
|
|
||||||||| ||||||| |
|
|
T |
12187210 |
tcacagattgcagttaac |
12187227 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 17138083 - 17137969
Alignment:
Q |
14 |
aattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagct |
113 |
Q |
|
|
|||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||| |||||||| |||||| ||||| || || |||||| |
|
|
T |
17138083 |
aattcaattcatcaacatctta--tgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaacacaaacatctcata-tcagct |
17137987 |
T |
 |
Q |
114 |
tcacagattatagttaac |
131 |
Q |
|
|
||||||||| ||||||| |
|
|
T |
17137986 |
tcacagattgcagttaac |
17137969 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 109 - 246
Target Start/End: Complemental strand, 15143964 - 15143826
Alignment:
Q |
109 |
cagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aaca |
207 |
Q |
|
|
|||||| |||||||||| | ||| |||| | |||||||| | |||||| ||||||||||| | | |||||| |||||||||||||||||| |||| |
|
|
T |
15143964 |
cagcttgacagattatattaaacatcatcattaagtcttagtactaccccgaggttcaactcttagcaactcgtgcaacaaaggtcgcaaaatcctaaca |
15143865 |
T |
 |
Q |
208 |
agtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|| |||||||||||| ||||||||||||||||||||||| |
|
|
T |
15143864 |
aggcactctgtttctaggtcactcgcgaggcgagagcct |
15143826 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 18456447 - 18456319
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||||| ||| ||| |||||||||| || || ||| || |||||||||||||| | ||||||||| |||||||||||||||| ||||| |
|
|
T |
18456447 |
cataataatatcaaatgcaagtcaacaacatcttaaat--attcaattatacttcaagtaatgcacataacattatatcacatcataatcaacatcaaca |
18456350 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaa |
130 |
Q |
|
|
|||||| ||||||||||||||||| |||| |
|
|
T |
18456349 |
catcttaaacagcttcacagattataattaa |
18456319 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 246
Target Start/End: Complemental strand, 17061844 - 17061749
Alignment:
Q |
152 |
ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc--aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||| | |||||||||||| |||| ||||||||||||| ||||||||||| |||||| || ||||| | ||||||||||||||||||||||| |
|
|
T |
17061844 |
ctaccccatggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattctgtaaataggtcactcgcgaggcgagagcct |
17061749 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 12756600 - 12756549
Alignment:
Q |
152 |
ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc |
203 |
Q |
|
|
|||||| | |||||||||||| |||| ||||||||||||| ||||||||||| |
|
|
T |
12756600 |
ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcc |
12756549 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0598 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: scaffold0598
Description:
Target: scaffold0598; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 1085 - 842
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat |
100 |
Q |
|
|
|||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
1085 |
cataattatatcaatttcaattcatcaacatctta--tgtatacaaatattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat |
988 |
T |
 |
Q |
101 |
atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa |
200 |
Q |
|
|
|| |||| ||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||| |||||||| |||||||| |||||| |
|
|
T |
987 |
attttatacagcttcacagattatagttaacctcattcttaagacttaatcctacccaagggttcaactctcgacaaatcgtgcaacaaaggttgcaaaa |
888 |
T |
 |
Q |
201 |
tccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|| ||||||||||||||||||| ||| ||||||||||||||||||| |
|
|
T |
887 |
tctaacaagtcactctgtttctgggttactcgcgaggcgagagcct |
842 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0032 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: scaffold0032
Description:
Target: scaffold0032; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 51667 - 51910
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat |
100 |
Q |
|
|
|||||||||| |||||||||||||||||||||||| |||||||||| || ||||||| ||||||||||||||||||||| ||||| ||||||||||||| |
|
|
T |
51667 |
cataattataacaaattcaattcatcaacatctta--tgtatacaaatatccttcaagaaatgcataaacattataacacttcatattcaacaacaacat |
51764 |
T |
 |
Q |
101 |
atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa |
200 |
Q |
|
|
||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||| ||| ||||||| | |||||| ||||| ||||||||| |
|
|
T |
51765 |
atcttattcagcttcacagattatagttaacctcactcttaagtcttaatcctacccaagggtccaattctcgacaactcgtgcaacaaaagtcgcaaaa |
51864 |
T |
 |
Q |
201 |
tccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|| ||||||||||||||||||| ||||||||||||||||||||||| |
|
|
T |
51865 |
tctaacaagtcactctgtttctgggtcactcgcgaggcgagagcct |
51910 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 165; Significance: 2e-88; HSPs: 22)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 16199679 - 16199438
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat |
100 |
Q |
|
|
|||||| ||||||| ||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
T |
16199679 |
cataataatatcaatttcaattcatctacatcttag--gtatacaaatattcttcaagtaatgcataaacattatattacatcataatcaacaacaacat |
16199582 |
T |
 |
Q |
101 |
atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa |
200 |
Q |
|
|
||||||| ||||||||||||||||| ||||||||||| | |||||||||| |||||||||||||||||||||||| | |||||| ||||||||||||||| |
|
|
T |
16199581 |
atcttatacagcttcacagattataattaacctcattgttaagtcttaatcctacccaagggttcaactctcgacaactcgtgcaacaaaggtcgcaaaa |
16199482 |
T |
 |
Q |
201 |
tccaacaagtcactctgtttctcggtcactcgcgaggcgagagc |
244 |
Q |
|
|
||||| |||||||||||||| | ||||||||||||||||||||| |
|
|
T |
16199481 |
tccaataagtcactctgtttttgggtcactcgcgaggcgagagc |
16199438 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 31971343 - 31971586
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat |
100 |
Q |
|
|
|||||| ||||||| | |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
T |
31971343 |
cataataatatcaattccaattcatcaacatctta--tgtatacaaatattcttcaagtaatgcataaacattatatcacatcataatcaacaacaacat |
31971440 |
T |
 |
Q |
101 |
atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa |
200 |
Q |
|
|
||||||| || |||||||||||||| ||||||||||| | |||||||||| |||||||| |||||| |||||||| | |||||| ||||||||||||||| |
|
|
T |
31971441 |
atcttatacatcttcacagattataattaacctcattgttaagtcttaatcctacccaaaggttcagctctcgacaactcgtgcaacaaaggtcgcaaaa |
31971540 |
T |
 |
Q |
201 |
tccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|| ||||||||||||| ||||| |||| ||||||||| || ||||| |
|
|
T |
31971541 |
tctaacaagtcactctatttctgggtcgctcgcgaggtgacagcct |
31971586 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 45131032 - 45130793
Alignment:
Q |
1 |
cataattatatcaaattcaa-ttcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||| ||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||| |
|
|
T |
45131032 |
cataataatatcaatttcaaattcatcaacatcttag--gtatacaattattcttcaagtaatgcataaacattatatcacatcataatcatcaacaaca |
45130935 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
||||||| ||||||||||||||||| ||||||||||| | |||||||||| |||||||||||| ||||||||||| | |||||| |||||||||||||| |
|
|
T |
45130934 |
aatcttatacagcttcacagattataattaacctcattattaagtcttaatcctacccaagggtccaactctcgacaactcgtgcaacaaaggtcgcaaa |
45130835 |
T |
 |
Q |
200 |
atccaacaagtcactctgtttctcggtcactcgcgaggcgag |
241 |
Q |
|
|
||| || |||||||||||||||| |||||||||||||||||| |
|
|
T |
45130834 |
atctaataagtcactctgtttctgggtcactcgcgaggcgag |
45130793 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 21919034 - 21918790
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaaca-ttcttcaagtaatgcataaacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||| | ||||||| |||||||||| || || |||| | ||||||||||||||||||||||||||| ||||||||||||| || ||||| |
|
|
T |
21919034 |
cataataatatcaattgcaattcaacaacatcttaaat--attcaaataattcttcaagtaatgcataaacattatatcacatcataatcagcagcaaca |
21918937 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| ||||||||||||| || |||||||||| | |||||||||| ||||||||||||||||||||||| | || ||| |||||||||||||| |
|
|
T |
21918936 |
catcttaaacagcttcacagatcgtaattaacctcatcgttaagtcttaatcttacccaagggttcaactctcgacaactcatgcaacaaaggtcgcaaa |
21918837 |
T |
 |
Q |
200 |
atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||| ||||||||||||||||||| ||||||||||||||||||||||| |
|
|
T |
21918836 |
atctaacaagtcactctgtttctaggtcactcgcgaggcgagagcct |
21918790 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 18879270 - 18879027
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||| | |||||||||||||||||| || || |||| |||||||||||||||| | ||||||||| |||||||||||||||| || || |
|
|
T |
18879270 |
cataataatatcaattgcaattcatcaacatcttaaat--attcaaatattcttcaagtaatgctcataacattatatcacatcataatcaacatcagca |
18879173 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
||||||| ||||||||||||||||||||||| |||| | ||||||| || ||| || | ||||||||||||||| | |||||| ||||||| |||||| |
|
|
T |
18879172 |
catcttat-cagcttcacagattatagttaacatcatcattaagtcttgatgctatcccaaggttcaactctcgacaactcgtgcaacaaaggccgcaaa |
18879074 |
T |
 |
Q |
200 |
atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||| |||||| |||||||||||| ||||||||||||||||||||||| |
|
|
T |
18879073 |
atctaacaaggcactctgtttctgggtcactcgcgaggcgagagcct |
18879027 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 21389486 - 21389353
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
T |
21389486 |
cataattatatcaaattcaattcatcaacatctta--tgtatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacat |
21389389 |
T |
 |
Q |
101 |
atcttattcagcttcacagattatagttaacctcat |
136 |
Q |
|
|
|||||||||||||||||| |||| | ||||| |||| |
|
|
T |
21389388 |
atcttattcagcttcacatattacaattaacttcat |
21389353 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 20536295 - 20536539
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||| | |||||||||||||||||| || || |||| ||||||||||||||||| | ||||||||| |||||||||||| ||| ||||| |
|
|
T |
20536295 |
cataataatatcaattgcaattcatcaacatcttaaat--attcaaatattcttcaagtaatgcacataacattatatcacatcataatcgacatcaaca |
20536392 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| || |||||||||||||| ||||| || | | |||||||||| |||||| | |||||||| |||||| | |||||| |||||||||||||| |
|
|
T |
20536393 |
catcttaaacaacttcacagattataattaacatcctcattaagtcttaatactaccccaaggttcaacactcgacaactcgtgcaacaaaggtcgcaaa |
20536492 |
T |
 |
Q |
200 |
atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
| | || |||||||||||||||| ||||||||||||||||||||||| |
|
|
T |
20536493 |
acctaataagtcactctgtttctgggtcactcgcgaggcgagagcct |
20536539 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 21396015 - 21395896
Alignment:
Q |
2 |
ataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacata |
101 |
Q |
|
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |
|
|
T |
21396015 |
ataattatatcaaattcaattcatcaacatctta--tgtatacaaacattcttcaagtaatgcataaacattataacacttcataatcaataacaacata |
21395918 |
T |
 |
Q |
102 |
tcttattcagcttcacagatta |
123 |
Q |
|
|
|||||||||||||||||||||| |
|
|
T |
21395917 |
tcttattcagcttcacagatta |
21395896 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 21778812 - 21778697
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
T |
21778812 |
cataattatatcaaattcaattcatcaacatctta--tgtatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacat |
21778715 |
T |
 |
Q |
101 |
atcttattcagcttcaca |
118 |
Q |
|
|
|||||||||||||||||| |
|
|
T |
21778714 |
atcttattcagcttcaca |
21778697 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 21790508 - 21790389
Alignment:
Q |
2 |
ataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacata |
101 |
Q |
|
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |
|
|
T |
21790508 |
ataattatatcaaattcaattcatcaacatctta--tgtatacaaacattcttcaagtaatgcataaacattataacacttcataatcaataacaacata |
21790411 |
T |
 |
Q |
102 |
tcttattcagcttcacagatta |
123 |
Q |
|
|
|||||||||||||||||||||| |
|
|
T |
21790410 |
tcttattcagcttcacagatta |
21790389 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 54 - 246
Target Start/End: Complemental strand, 25363123 - 25362930
Alignment:
Q |
54 |
tcaagtaatgcataaa-cattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattc |
152 |
Q |
|
|
|||||||||||||||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| ||| |||| | | |||||||||| | |
|
|
T |
25363123 |
tcaagtaatgcataaaacattataccacatcataatcaacaacaacacatcttaaacagcttcacagattataattagcctcttcattaagtcttaatac |
25363024 |
T |
 |
Q |
153 |
tacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||||||| |||||||||||| || | |||||| | |||||||||||| || ||||| ||||||||||| |||||||| |||||||||||||| |
|
|
T |
25363023 |
tacccaaaggttcaactctcaacaactcgtgcaagaaaggtcgcaaagtctcacaaggcactctgtttccgggtcactctcgaggcgagagcct |
25362930 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 52 - 246
Target Start/End: Complemental strand, 18818394 - 18818199
Alignment:
Q |
52 |
cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat |
150 |
Q |
|
|
|||||||||||||| | ||||||||| |||| ||||||||||| ||||| |||||| ||||||||||||||||| ||||| || | | |||||||||| |
|
|
T |
18818394 |
cttcaagtaatgcacataacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcattaagtcttaat |
18818295 |
T |
 |
Q |
151 |
tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||| | |||||||||| || | |||||| ||||||||||||||| | |||||| |||||||||||| ||||||||||||||||||||||| |
|
|
T |
18818294 |
actaccctaaatttcaactctcaacaactcgtgcaacaaaggtcgcaaaacctaacaagacactctgtttctgggtcactcgcgaggcgagagcct |
18818199 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 80 - 246
Target Start/End: Complemental strand, 21923884 - 21923718
Alignment:
Q |
80 |
catcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaat |
179 |
Q |
|
|
|||||||||||||||||||| |||||| ||||||||||||||||| ||||| |||| | |||||||||| ||||| | |||||||||||| || | | |
|
|
T |
21923884 |
catcataatcaacaacaacacatcttaaacagcttcacagattataattaacatcatcattaagtcttaatactacctcaaggttcaactctcaactact |
21923785 |
T |
 |
Q |
180 |
cgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|| || ||||||||||||||| | |||||| |||||||||||| ||||||||||||||||||||||| |
|
|
T |
21923784 |
cgggcaacaaaggtcgcaaaacctaacaaggcactctgtttctgggtcactcgcgaggcgagagcct |
21923718 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 52 - 246
Target Start/End: Original strand, 23648689 - 23648885
Alignment:
Q |
52 |
cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat |
150 |
Q |
|
|
|||||||||||||| | ||||||||| |||||||||||||||| ||||| |||||| |||||| |||||||||| ||||| |||| | | |||||||| |
|
|
T |
23648689 |
cttcaagtaatgcacacaacattatatcacatcataatcaacatcaacacatcttaaacagcttaacagattataattaacatcatcattaggtcttaat |
23648788 |
T |
 |
Q |
151 |
tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgca-aaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||| | |||||||||||| || | |||||| |||||||||||| ||| | ||||||||||||||||||| ||| |||| |||||||||||||| |
|
|
T |
23648789 |
actaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcataaacctaacaagtcactctgtttctgggttactcacgaggcgagagcct |
23648885 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 28649078 - 28648833
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||||| ||| ||| |||||||||| || |||||| ||| ||||||||||| || ||||||||| |||||||||||||||| ||||| |
|
|
T |
28649078 |
cataataatatcaaatgcaagtcaacaacatctta-at-tatacattcataattcaagtaatgtgtataacattatatcacatcataatcaacatcaaca |
28648981 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| |||||||||| |||||| ||||| |||| | |||||| ||| |||||| | |||||||||||| || | |||||| |||||||||||||| |
|
|
T |
28648980 |
catcttaaacagcttcacatattataattaacatcatcattaagtctcaatactaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaa |
28648881 |
T |
 |
Q |
200 |
atcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||| |||||| |||||||||||| ||||| ||| |||||||||||| |
|
|
T |
28648880 |
atcctaacaaggcactctgtttctgggtcatgcgcaaggcgagagcct |
28648833 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 22626822 - 22627067
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||||| ||| ||| |||||||||| || || ||| || |||||||||||| || ||||||||| |||||||| |||| || ||||| |
|
|
T |
22626822 |
cataataatatcaaatacaaatcaacaacatcttaaat--attcaattatacttcaagtaatgtgtataacattatatcacatcattatcatcatcaaca |
22626919 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| ||||||||||||||||| ||||| || | | |||||| ||| |||||| | |||||||||||| || | |||||| |||||||||||||| |
|
|
T |
22626920 |
catcttaaacagcttcacagattataattaacatcctcattaagtctcaatactaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaa |
22627019 |
T |
 |
Q |
200 |
atcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
| || |||||| |||||||||||| | ||||||||||||||||||||| |
|
|
T |
22627020 |
aacctaacaagacactctgtttctagatcactcgcgaggcgagagcct |
22627067 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 68 - 246
Target Start/End: Original strand, 6759408 - 6759588
Alignment:
Q |
68 |
aacattataacacatcataatcaacaacaacatatcttatt-cagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttca |
166 |
Q |
|
|
||||||||| |||||||||||||||| ||||| |||||| ||||||||||||||||| ||||| |||| | |||||| ||| |||||| | |||||| |
|
|
T |
6759408 |
aacattatatcacatcataatcaacatcaacacatcttaaaacagcttcacagattataattaacatcatcattaagtctcaatactaccccaaggttca |
6759507 |
T |
 |
Q |
167 |
actctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||||| | | | |||||||| || | ||||||||| |||||| |||||||||||| ||||||||||||||||||||||| |
|
|
T |
6759508 |
actcttagcaacttgtgcgacacagattgcaaaatcctaacaagacactctgtttctgggtcactcgcgaggcgagagcct |
6759588 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 22875151 - 22875397
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||||| ||| ||| |||||||| | || ||||| ||| |||||||||||| || ||||||||| |||||||||||||||| ||||| |
|
|
T |
22875151 |
cataataatatcaaatgcaagtcaacaacatctcaaat--atacattcataattcaagtaatgcgtataacattatatcacatcataatcaacatcaaca |
22875248 |
T |
 |
Q |
100 |
tatcttatt-cagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaa |
198 |
Q |
|
|
|||||| ||||||||||||||||| ||||| ||| | | ||| ||| |||||| | ||||||||||| || | | |||||||| || |||||| |
|
|
T |
22875249 |
catcttaaaacagcttcacagattataattaacatcaccattacatctcaatactaccccaaggttcaactcttaacaacttgtgcgacatagatcgcaa |
22875348 |
T |
 |
Q |
199 |
aatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
| || ||||||||||||||||||| ||||||||||||||||||||||| |
|
|
T |
22875349 |
agccctaacaagtcactctgtttctgggtcactcgcgaggcgagagcct |
22875397 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 72 - 233
Target Start/End: Original strand, 7372927 - 7373088
Alignment:
Q |
72 |
ttataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactct |
171 |
Q |
|
|
||||| |||| ||||||||||| ||||| |||||| ||||||||||||||||| ||||| || | | |||||| | | | |||| | |||||||||| |
|
|
T |
7372927 |
ttatatcacaacataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcattaagtctcactaccaccccaaagttcaactct |
7373026 |
T |
 |
Q |
172 |
cgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgc |
233 |
Q |
|
|
| || | |||||| ||||||||||||||| | |||||| |||||||||||| |||||||||| |
|
|
T |
7373027 |
caacaactcgtgcaacaaaggtcgcaaaacctaacaagacactctgtttctgggtcactcgc |
7373088 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 52 - 246
Target Start/End: Original strand, 23406517 - 23406712
Alignment:
Q |
52 |
cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat |
150 |
Q |
|
|
|||||||||||||| | ||||||||| |||| |||| |||||| ||||| |||||| || ||||||| |||||| ||||| || | | ||||| ||| |
|
|
T |
23406517 |
cttcaagtaatgcacataacattatatcacaacatagtcaacatcaacacatcttaaacaacttcacatattataattaacatcctcattaagtcccaat |
23406616 |
T |
 |
Q |
151 |
tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|| || | ||||||||||| | | |||||| ||||||||| ||||| | |||||| |||||||||||| ||||||||||||||||||||||| |
|
|
T |
23406617 |
attatcccaaagttcaactctcaataactcgtgcaacaaaggtcacaaaacctaacaaggcactctgtttctgggtcactcgcgaggcgagagcct |
23406712 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 56 - 246
Target Start/End: Complemental strand, 16092323 - 16092130
Alignment:
Q |
56 |
aagtaatgcata-aacattataacacatcataatcaacaacaacatatcttatt-cagcttcacagattatagttaacctcattctcaagtcttaattct |
153 |
Q |
|
|
||||||||| || ||||||||| |||||||||||||||| ||||| |||||| || |||| || |||||| ||||| |||| || |||||| ||| | |
|
|
T |
16092323 |
aagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaaacaacttcgcatattataattaacatcatccttaagtctcaatatt |
16092224 |
T |
 |
Q |
154 |
acccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||| | ||||||||||| || | | ||| |||| || ||||||||||| |||| | |||||||||||| ||||||||| ||||||||||||| |
|
|
T |
16092223 |
accccaaggttcaactcttaacaacttgtgtgacacagatcgcaaaatcctaacagggcactctgtttctgggtcactcgggaggcgagagcct |
16092130 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 246
Target Start/End: Original strand, 41598421 - 41598516
Alignment:
Q |
152 |
ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc--aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||| | |||||||||||| |||| ||||||| ||||| ||||||||||| |||||| || ||||| || ||||||||||||||||||||||| |
|
|
T |
41598421 |
ctaccccaaggttcaactctcaacgactcgtgcggcaaagatcgcaaaatcctaaacaag-cattctgtaactaggtcactcgcgaggcgagagcct |
41598516 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 163; Significance: 4e-87; HSPs: 13)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 38801424 - 38801181
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat |
100 |
Q |
|
|
||||||||||||||||||||||||||||||| ||| || |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
T |
38801424 |
cataattatatcaaattcaattcatcaacatattatat--atacaattattcttcaagtaatgcataaacattataacacatcgtaatcaacaacaacat |
38801327 |
T |
 |
Q |
101 |
atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa |
200 |
Q |
|
|
|||||||||||||||||| ||||||||||| |||||| | |||||||||| |||||||||||||||||| |||| | |||| | ||||||||||||||| |
|
|
T |
38801326 |
atcttattcagcttcacaaattatagttaatctcattattaagtcttaatcctacccaagggttcaacttccgacaactcgtacaacaaaggtcgcaaaa |
38801227 |
T |
 |
Q |
201 |
tccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|| ||||||||||||||||||| ||||||||||||||||||||||| |
|
|
T |
38801226 |
tctaacaagtcactctgtttctaggtcactcgcgaggcgagagcct |
38801181 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 27250763 - 27250519
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaa-cattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||| | |||||||||||||||||| || || |||| ||| ||||||||||||||||| ||||||| |||||||||||||||||||||| |
|
|
T |
27250763 |
cataataatatcaattgcaattcatcaacatcttaaat--attcaaatattattcaagtaatgcataaaacattatatcacatcataatcaacaacaaca |
27250666 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| ||||||||||||||||| |||||||| | | |||| | ||| |||||||| ||||||||||||||| | |||||| |||||||||||||| |
|
|
T |
27250665 |
catcttaaacagcttcacagattataattaacctcttcattaagtatcaatgctacccaaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaa |
27250566 |
T |
 |
Q |
200 |
atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|| |||||| ||||||||||| |||||||||||||||||||||| |
|
|
T |
27250565 |
atataacaagggactctgtttctgtgtcactcgcgaggcgagagcct |
27250519 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 8 - 246
Target Start/End: Complemental strand, 22354599 - 22354362
Alignment:
Q |
8 |
atatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatctta |
106 |
Q |
|
|
||||||| | |||||||||||||||||| || || |||| ||||||||||||||| ||| ||||||||| |||||||||||||||| ||||| |||||| |
|
|
T |
22354599 |
atatcaattgcaattcatcaacatcttaaat--attcaaatattcttcaagtaatgtatataacattatatcacatcataatcaacatcaacacatctta |
22354502 |
T |
 |
Q |
107 |
ttcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaac |
206 |
Q |
|
|
||||||||||||||||| ||||| || | | |||||||||| ||||| || ||||||| |||| || | |||||| ||||||||||||||| | ||| |
|
|
T |
22354501 |
aacagcttcacagattataattaacatcctcattaagtcttaatactacctaaaggttcaattctcaacaactcgtgcaacaaaggtcgcaaaacctaac |
22354402 |
T |
 |
Q |
207 |
aagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||||||||||||| ||||||| ||||||||||||||| |
|
|
T |
22354401 |
aagtcactctgtttctgggtcacttgcgaggcgagagcct |
22354362 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 54 - 246
Target Start/End: Original strand, 21026818 - 21027011
Alignment:
Q |
54 |
tcaagtaatgcataaa-cattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattc |
152 |
Q |
|
|
|||||||||||||||| ||||||| |||||||||||||||| ||||| |||||| ||||||||||||||||| |||||||| | | |||||||||| | |
|
|
T |
21026818 |
tcaagtaatgcataaaacattatatcacatcataatcaacagcaacacatcttaaacagcttcacagattataattaacctcttcattaagtcttaatgc |
21026917 |
T |
 |
Q |
153 |
tacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||||||| |||| || ||| || | |||||| ||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||| |
|
|
T |
21026918 |
tacccaaaggtttaatcctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactttgtttctgggtcactcgcgaggcgagagcct |
21027011 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 50210247 - 50210002
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||||| ||| ||| |||||||| | ||||||| ||| |||||||||||| | ||||||||| |||||||||||||||| ||||| |
|
|
T |
50210247 |
cataataatatcaaatgcaagtcaacaacatctcaa--gtatacattcataattcaagtaatgcgtttaacattatatcacatcataatcaacatcaaca |
50210150 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| ||||||||||||||||| ||||| |||| | |||||| ||| |||||||| |||||||||||| || | |||||| |||||||||||||| |
|
|
T |
50210149 |
catcttaaacagcttcacagattataattaacatcatcattaagtctcaatactacccaaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaa |
50210050 |
T |
 |
Q |
200 |
atcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||| |||||| |||||||||||| ||||||||||||||||||||||| |
|
|
T |
50210049 |
atcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcct |
50210002 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 44 - 240
Target Start/End: Complemental strand, 22356168 - 22355969
Alignment:
Q |
44 |
caaacattcttcaagtaatgcata-aacattataacacatcataatcaa-caacaacatatcttattcagcttcacagattatagttaacctcattctca |
141 |
Q |
|
|
|||||||||||||||||||||| | ||||||||| |||||||||||||| || ||||| |||||| |||||||||||||||| ||||| |||| | | |
|
|
T |
22356168 |
caaacattcttcaagtaatgcacataacattatatcacatcataatcaatcatcaacacatcttaaatagcttcacagattataattaacatcatcatta |
22356069 |
T |
 |
Q |
142 |
agtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaa-gtcactctgtttctcggtcactcgcgaggcga |
240 |
Q |
|
|
||||||||| ||| || | ||||||||||||||| | |||||| ||||||||| ||||||| ||||| |||||||||||||| |||||||||||| |||| |
|
|
T |
22356068 |
agtcttaatgctatcccaaggttcaactctcgacaactcgtgcaacaaaggtctcaaaatctaacaatgtcactctgtttctaggtcactcgcgatgcga |
22355969 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 44 - 240
Target Start/End: Complemental strand, 22357854 - 22357655
Alignment:
Q |
44 |
caaacattcttcaagtaatgcata-aacattataacacatcataatcaa-caacaacatatcttattcagcttcacagattatagttaacctcattctca |
141 |
Q |
|
|
|||||||||||||||||||||| | ||||||||| |||||||||||||| || ||||| |||||| |||||||||||||||| ||||| |||| | | |
|
|
T |
22357854 |
caaacattcttcaagtaatgcacataacattatatcacatcataatcaatcatcaacacatcttaaatagcttcacagattataattaacatcatcatta |
22357755 |
T |
 |
Q |
142 |
agtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaa-gtcactctgtttctcggtcactcgcgaggcga |
240 |
Q |
|
|
||||||||| ||| || | ||||||||||||||| | |||||| ||||||||| ||||||| ||||| |||||||||||||| |||||||||||| |||| |
|
|
T |
22357754 |
agtcttaatgctatcccaaggttcaactctcgacaactcgtgcaacaaaggtctcaaaatctaacaatgtcactctgtttctaggtcactcgcgatgcga |
22357655 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 53 - 246
Target Start/End: Original strand, 22532406 - 22532601
Alignment:
Q |
53 |
ttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaatt |
151 |
Q |
|
|
||||||||||||| | ||||||||| |||||||||||||||| ||||| |||||| ||||||||||| | ||| |||| |||| | |||||| ||| |
|
|
T |
22532406 |
ttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagttcataaataacatcatcattaagtctcaata |
22532505 |
T |
 |
Q |
152 |
ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||||| | |||||||||||| || |||||| |||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||| |
|
|
T |
22532506 |
ctacctcaaggttcaactctcaacagctcgtgcaacaaaggtcgcaaaatcctaacaagtcactctgtttttgggtcactcgcgaggcgagagcct |
22532601 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 34509867 - 34510112
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||||| ||| ||| |||||||||| || |||||| ||| ||||||||||| || ||||||||| ||||||||| |||||| ||||| |
|
|
T |
34509867 |
cataatgatatcaaatgcaagtcaacaacatctta-at-tatacattcatatctcaagtaatgcttataacattatatcacatcatattcaacatcaaca |
34509964 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| |||||||| |||||||| ||||| |||| | |||||| ||| |||||| | |||||||| ||| || | |||||| |||||||||||||| |
|
|
T |
34509965 |
catcttaaacagcttcaaagattataattaacatcatcattaagtctcaatactaccccaaggttcaaccctcaacaactcgtgcaacaaaggtcgcaaa |
34510064 |
T |
 |
Q |
200 |
atcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
| || |||| | |||||||||||| ||||||||| ||||||||||||| |
|
|
T |
34510065 |
aacctaacatgacactctgtttctgggtcactcgtgaggcgagagcct |
34510112 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 52 - 244
Target Start/End: Original strand, 20135323 - 20135517
Alignment:
Q |
52 |
cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat |
150 |
Q |
|
|
|||||||||||||||| ||||||||| || |||||||| |||| ||||| |||||| ||||||||||||||||| ||||| ||| | | |||||| | |
|
|
T |
20135323 |
cttcaagtaatgcatacaacattatatcatatcataatgaacatcaacacatcttaaacagcttcacagattataattaacaacatcattaggtcttact |
20135422 |
T |
 |
Q |
151 |
tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgca-aaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagc |
244 |
Q |
|
|
|||||| | |||||||||||| || | |||| | |||||||||||| ||| | ||||||||||||||||||| ||| |||||||||| |||||| |
|
|
T |
20135423 |
actaccctaaggttcaactctcaacaactcgtacaacaaaggtcgcataaacctaacaagtcactctgtttctgggttactcgcgaggtgagagc |
20135517 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 109 - 246
Target Start/End: Complemental strand, 20847146 - 20847009
Alignment:
Q |
109 |
cagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaa |
208 |
Q |
|
|
|||||||| ||||||| ||||||||| | | |||||||||| |||||||| |||| || ||| || | |||||| ||||||||||||||||| ||||| |
|
|
T |
20847146 |
cagcttcatagattatggttaacctcttcattaagtcttaatgctacccaaaggtttaatcctcaacaactcgtgcaacaaaggtcgcaaaatctaacaa |
20847047 |
T |
 |
Q |
209 |
gtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||||||||||| ||||||||||||||| ||||||| |
|
|
T |
20847046 |
gtcactctgtttctgggtcactcgcgaggcaagagcct |
20847009 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 48603652 - 48603730
Alignment:
Q |
54 |
tcaagtaatgcataaa-cattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaac |
131 |
Q |
|
|
|||||||||||||||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| ||||| |
|
|
T |
48603652 |
tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaac |
48603730 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 246
Target Start/End: Original strand, 433244 - 433339
Alignment:
Q |
152 |
ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc--aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||| | |||||||||||| |||| ||||||||||||| ||||||||||| |||||| || | || || ||||||||||||||||||||||| |
|
|
T |
433244 |
ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattttgcaactgggtcactcgcgaggcgagagcct |
433339 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 160; Significance: 2e-85; HSPs: 19)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 14053336 - 14053092
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacat-cttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||| |||||||||||||||| |||| || ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
T |
14053336 |
cataataatatcaatttcaattcatcaacattctta--tgcatacaaatattcttcaagtaatgcataaacattatatcacatcataatcaacaacaaca |
14053239 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||||| | ||||||||||||||| ||||||||||| | |||||||||| |||||||||||||||||||||||| | |||||| |||||||||||||| |
|
|
T |
14053238 |
tatcttatacggcttcacagattataattaacctcattgttaagtcttaatcctacccaagggttcaactctcgacaactcgtgcaacaaaggtcgcaaa |
14053139 |
T |
 |
Q |
200 |
atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||| ||||||||||||||||||| |||||||||| |||||||||||| |
|
|
T |
14053138 |
atctaacaagtcactctgtttctgggtcactcgcaaggcgagagcct |
14053092 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 12902844 - 12903088
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaa-cattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||| | ||||||||||||||||| || || |||| ||| ||||||||||||||||| ||||||| |||||||||||||||||||||| |
|
|
T |
12902844 |
cataataatatcaattgtaattcatcaacatcttaaat--attcaaatattattcaagtaatgcataaaacattatatcacatcataatcaacaacaaca |
12902941 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| ||||||||||||||||| |||||||| | | |||||||||| |||||||| |||||||||||| || |||||| |||||||||||||| |
|
|
T |
12902942 |
catcttaaacagcttcacagattataattaacctcttcattaagtcttaatcctacccaaaggttcaactctcaacagctcgtgcaacaaaggtcgcaaa |
12903041 |
T |
 |
Q |
200 |
atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||| |||||| |||||||||||| |||||||||||||||| |||||| |
|
|
T |
12903042 |
atctaacaaggcactctgtttctgggtcactcgcgaggcgggagcct |
12903088 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 17046572 - 17046724
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |
|
|
T |
17046572 |
cataattatatcaaattcaattcatcaacatctta--tgtatacaaacattcttcaagtaatgtataaacattataacacatcttaatcaacaacaacat |
17046669 |
T |
 |
Q |
101 |
atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctac |
155 |
Q |
|
|
||||||||||||||||||||||||| ||||||| ||| | |||||||||| |||| |
|
|
T |
17046670 |
atcttattcagcttcacagattataattaaccttattattaagtcttaatcctac |
17046724 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 44 - 246
Target Start/End: Original strand, 3096772 - 3096974
Alignment:
Q |
44 |
caaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaag |
143 |
Q |
|
|
|||| ||||||||||||||||||||||||| || | ||||||||||| |||||||| |||||| |||||||||| |||||| |||||||||| | ||| |
|
|
T |
3096772 |
caaatattcttcaagtaatgcataaacattgtatctcatcataatcagcaacaacacatcttaaacagcttcacatattataattaacctcatcattaag |
3096871 |
T |
 |
Q |
144 |
tcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagag |
243 |
Q |
|
|
| || || |||||||| ||||||||||||||| | |||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |
|
|
T |
3096872 |
tatttatcctacccaaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcactcgcgaggcgagag |
3096971 |
T |
 |
Q |
244 |
cct |
246 |
Q |
|
|
||| |
|
|
T |
3096972 |
cct |
3096974 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 44052916 - 44053157
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||| | |||||||||||||||||| || || |||| |||||||||||||||| | ||||||||| |||||||||||||||| || || |
|
|
T |
44052916 |
cataataatatcaattgcaattcatcaacatcttaaat--attcaaatattcttcaagtaatgctcataacattatatcacatcataatcaacatcagca |
44053013 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| ||||||||||||||||| ||||| |||| | |||||||||| ||| || | ||||||||||||||| | |||||| |||||||||||||| |
|
|
T |
44053014 |
catcttaaacagcttcacagattataattaacatcatcattaagtcttaatgctatcccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaa |
44053113 |
T |
 |
Q |
200 |
atccaacaagtcactctgtttctcggtcactcgcgaggcgagag |
243 |
Q |
|
|
||| |||||| |||||||||||| |||||||||||||||||||| |
|
|
T |
44053114 |
atctaacaaggcactctgtttctgggtcactcgcgaggcgagag |
44053157 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 7088964 - 7089208
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaa-cattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||| | |||||||||||||||||| || || |||| ||| ||||||||||||||||| ||||||| ||||||||||| | |||||||| |
|
|
T |
7088964 |
cataataatatcaattgcaattcatcaacatcttacat--attcaaatattattcaagtaatgcataaaacattatatcacatcataattagcaacaaca |
7089061 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| || |||||||||||||| |||||||| | | |||||||||| |||| ||| ||||||||||||||| | || ||| |||||||||||||| |
|
|
T |
7089062 |
catcttaaacaacttcacagattataattaacctcttcattaagtcttaatgctactcaaaggttcaactctcgacaactcttgcaacaaaggtcgcaaa |
7089161 |
T |
 |
Q |
200 |
atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||| |||||| ||||||||||| ||||||||||||||||||||||| |
|
|
T |
7089162 |
atctaacaagacactctgtttccgggtcactcgcgaggcgagagcct |
7089208 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 22636522 - 22636765
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||| | |||||||||||||||||| || || |||| ||||||||||||||||||| ||||||||| |||||||||||| ||| ||||| |
|
|
T |
22636522 |
cataataatatcaattgcaattcatcaacatcttaaat--attcaaatattcttcaagtaatgcatataacattatatcacatcataatcgacatcaaca |
22636619 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| ||||||||||||||||| ||||| || | | |||||||||| |||||| | ||||||| |||| || | |||||| |||||||||||||| |
|
|
T |
22636620 |
catcttaa-cagcttcacagattataattaacatcctcgttaagtcttaatactaccccaaggttcaattctcaacaactcgtgcaacaaaggtcgcaaa |
22636718 |
T |
 |
Q |
200 |
atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
| | |||||| |||||||||||| ||||||||| ||||||||||||| |
|
|
T |
22636719 |
acctaacaagacactctgtttctgggtcactcgtgaggcgagagcct |
22636765 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 23374393 - 23374149
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaa-cattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
||||| |||||||| | ||||||| |||||||||| || || |||| | | |||||||||||||||| ||||||| |||||||||||||||||||||| |
|
|
T |
23374393 |
cataaatatatcaattgcaattcaacaacatcttaaat--attcaaataattctcaagtaatgcataaaacattatatcacatcataatcaacaacaaca |
23374296 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| ||||||| ||||||||||||||||| | | |||||||||| |||||||| |||| || ||| || | |||||| |||||||| ||||| |
|
|
T |
23374295 |
gatcttaaaaagcttcagagattatagttaacctcttcattaagtcttaatgctacccaaaggtttaatcctcaacaactcgtgcaacaaaggttgcaaa |
23374196 |
T |
 |
Q |
200 |
atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||| ||||||||||||||||||| |||||| |||||||||||||||| |
|
|
T |
23374195 |
atctaacaagtcactctgtttctgggtcacccgcgaggcgagagcct |
23374149 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 54 - 246
Target Start/End: Complemental strand, 17048055 - 17047862
Alignment:
Q |
54 |
tcaagtaatgcataaa-cattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattc |
152 |
Q |
|
|
|||||||||||||||| ||||||| |||||||||||||||||||||| |||||| ||||||||||| || || ||| ||| | | |||||||||| | |
|
|
T |
17048055 |
tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacaggttgtaattagtctcttcattaagtcttaatac |
17047956 |
T |
 |
Q |
153 |
tacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||||||| |||||||||||| || | |||||| |||||||||||||| || ||||| ||||||||||| ||||||||||||||||||||||| |
|
|
T |
17047955 |
tacccaaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaagtctcacaaggcactctgtttccgggtcactcgcgaggcgagagcct |
17047862 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 16240004 - 16239764
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||||| ||| ||| |||||||||| || || ||| || ||| |||||||||| | ||||||||| || ||||||||||||| ||||| |
|
|
T |
16240004 |
cataataatatcaaatgcaagtcaacaacatcttaaat--attcaattatactttaagtaatgcaaataacattatatcatatcataatcaacatcaaca |
16239907 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| ||||||| ||||||||| ||||| |||| | |||||||||| |||||| | ||||||||||| || | |||||| |||||||||||||| |
|
|
T |
16239906 |
catcttaaacagcttcgcagattataattaacatcatcattaagtcttaatactaccccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaa |
16239807 |
T |
 |
Q |
200 |
atcc-aacaagtcactctgtttctcggtcactcgcgaggcgag |
241 |
Q |
|
|
| || ||||||||||||||||||| |||||||||||||||||| |
|
|
T |
16239806 |
aacctaacaagtcactctgtttctgggtcactcgcgaggcgag |
16239764 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 53 - 246
Target Start/End: Original strand, 14038785 - 14038980
Alignment:
Q |
53 |
ttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaatt |
151 |
Q |
|
|
||||||||||||| | ||||||||| |||||||||||||||| ||||| || ||| ||||||||||||||||| |||| |||| | |||||| ||| |
|
|
T |
14038785 |
ttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatgttaaacagcttcacagattataattaatatcatcattaagtctcaata |
14038884 |
T |
 |
Q |
152 |
ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||| | ||||||||||| | | | |||||||| || ||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| |
|
|
T |
14038885 |
ctaccccaaggttcaactcttagcaacttgtgcgacacagatcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcct |
14038980 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 53 - 246
Target Start/End: Complemental strand, 16377507 - 16377311
Alignment:
Q |
53 |
ttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaatt |
151 |
Q |
|
|
|||||||||||| || ||||||||| |||||||||||||||| |||| |||||| ||||| ||||||||||| ||||| |||| | |||||| ||| |
|
|
T |
16377507 |
ttcaagtaatgcgtataacattatatcacatcataatcaacatcaacgcatcttaaacagctccacagattataattaacatcatcattaagtctcaata |
16377408 |
T |
 |
Q |
152 |
ctacccaagggttcaactctc-gacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||| | |||||||||||| | | |||||| |||||||| ||||||||| |||||| |||| ||||||| ||||||||| ||||||||||||| |
|
|
T |
16377407 |
ctaccccaaggttcaactctcataaaactcgtgcaacaaaggtagcaaaatcctaacaaggcactatgtttctgggtcactcgtgaggcgagagcct |
16377311 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 52 - 246
Target Start/End: Original strand, 7893839 - 7894032
Alignment:
Q |
52 |
cttcaagtaatgcataaac-attataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat |
150 |
Q |
|
|
|||||||||||||| | || ||||| ||||||||||||| ||||| |||||| ||||||||||||||||| ||||| |||| | |||||||||| |
|
|
T |
7893839 |
cttcaagtaatgcacataccattatttcacatcataatcagcaacac---atcttaaacagcttcacagattataattaacatcatcgttaagtcttaat |
7893935 |
T |
 |
Q |
151 |
tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||||| | ||||||||||||| | | || ||| ||||||||||||||| || |||||| | |||||||||| ||||||||| ||||||||||||| |
|
|
T |
7893936 |
attaccccaaggttcaactctcggcaactcatgcaacaaaggtcgcaaaaacctaacaagactctctgtttctgggtcactcgtgaggcgagagcct |
7894032 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 15121834 - 15121747
Alignment:
Q |
2 |
ataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaac |
92 |
Q |
|
|
||||||||||||| |||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||| |||||||||||||| |
|
|
T |
15121834 |
ataattatatcaa-ttcaattcatcaacatctta--tgtatacaattaatcttcaagtaatgcataaacattataatacatcataatcaac |
15121747 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 235
Target Start/End: Original strand, 6190599 - 6190782
Alignment:
Q |
52 |
cttcaagtaatgcataaacattataacacatcata-atcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat |
150 |
Q |
|
|
||||||||||||| || |||||| | ||||||||| ||||||| ||||| || || ||||||||| ||| || |||| |||| |||||||||||| |
|
|
T |
6190599 |
cttcaagtaatgcgtatacattagatcacatcatacatcaacattaacatctcataa-cagcttcacgaattgtaattaatatcatattcaagtcttaat |
6190697 |
T |
 |
Q |
151 |
tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcga |
235 |
Q |
|
|
|||| | | ||||||||||||||| |||||| ||||||||||||||||| ||||||||||||| ||| | |||||||||||| |
|
|
T |
6190698 |
gctacgccaaggttcaactctcgacagctcgtgcaacaaaggtcgcaaaatctaacaagtcactctatttttgggtcactcgcga |
6190782 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 246
Target Start/End: Original strand, 15091093 - 15091228
Alignment:
Q |
112 |
cttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagt |
210 |
Q |
|
|
|||||||||||||| ||||| || | | |||||| ||| |||||| | ||||||||||| | | |||||||| || ||||||||||| |||||| |
|
|
T |
15091093 |
cttcacagattataattaacatcttcattaagtctcaatactaccccaaggttcaactcttagaaacttgtgcgacacagatcgcaaaatcctaacaagg |
15091192 |
T |
 |
Q |
211 |
cactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||||||||| ||||||||||||||||||||||| |
|
|
T |
15091193 |
cactctgtttctgggtcactcgcgaggcgagagcct |
15091228 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 125
Target Start/End: Complemental strand, 16270221 - 16270147
Alignment:
Q |
52 |
cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattata |
125 |
Q |
|
|
|||||||||||||| | ||||||||| |||||||||||||||| ||||| |||||| ||||||||||||||||| |
|
|
T |
16270221 |
cttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattata |
16270147 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 246
Target Start/End: Original strand, 7798968 - 7799028
Alignment:
Q |
186 |
acaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||||||||||||||| | |||||| |||| ||||||| ||||||||||||||||||||||| |
|
|
T |
7798968 |
acaaaggtcgcaaaacctaacaagacactttgtttctgggtcactcgcgaggcgagagcct |
7799028 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 246
Target Start/End: Complemental strand, 44928798 - 44928712
Alignment:
Q |
161 |
ggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc--aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||||||||| |||| ||||||||||||| ||||||||||| |||||| || ||||| || ||||||||||||||||||||||| |
|
|
T |
44928798 |
ggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattctgtaactgggtcactcgcgaggcgagagcct |
44928712 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0718 (Bit Score: 159; Significance: 9e-85; HSPs: 1)
Name: scaffold0718
Description:
Target: scaffold0718; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 5164 - 4925
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |
|
|
T |
5164 |
cataattatatcaaattcaattcatcaacatctta--tgtatacaaacattcttcaagtaatgtataaacattataacacatcttaatcaacaacaacat |
5067 |
T |
 |
Q |
101 |
atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa |
200 |
Q |
|
|
|| |||||||| |||||| |||||| ||||||| ||| | || ||||||| |||||||||||||||||||||||| | |||||| ||||||||| ||||| |
|
|
T |
5066 |
attttattcagtttcacatattataattaaccttattattaaatcttaatcctacccaagggttcaactctcgacaactcgtgcaacaaaggtctcaaaa |
4967 |
T |
 |
Q |
201 |
tccaacaagtcactctgtttctcggtcactcgcgaggcgaga |
242 |
Q |
|
|
||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
4966 |
tccaataagtcactctgtttctgtgtcactcgcgaggcgaga |
4925 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0113 (Bit Score: 159; Significance: 9e-85; HSPs: 1)
Name: scaffold0113
Description:
Target: scaffold0113; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 32152 - 32395
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat |
100 |
Q |
|
|
|||||| ||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||| |
|
|
T |
32152 |
cataataatatcaatttcaattcatcaacatcttag--gtatacaaatattcttcaagtaatgcataaacattatatcacatcataatcaacaacgacat |
32249 |
T |
 |
Q |
101 |
atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa |
200 |
Q |
|
|
||||||| ||||||||||||||||| ||||||||||| | |||||||||| |||||||||||||||||||||||| | | | || ||||||||||||||| |
|
|
T |
32250 |
atcttatacagcttcacagattataattaacctcattgttaagtcttaatcctacccaagggttcaactctcgacaactagagcaacaaaggtcgcaaaa |
32349 |
T |
 |
Q |
201 |
tccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|| || |||| ||||||||||| ||||||||||||||||||||||| |
|
|
T |
32350 |
tcaaaaaagtaactctgtttctgggtcactcgcgaggcgagagcct |
32395 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0427 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: scaffold0427
Description:
Target: scaffold0427; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 8 - 246
Target Start/End: Original strand, 13590 - 13826
Alignment:
Q |
8 |
atatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttat |
107 |
Q |
|
|
||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |
|
|
T |
13590 |
atatcaatttcgattcatcaacatctta--tgtatacaaacattcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttat |
13687 |
T |
 |
Q |
108 |
tcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaaca |
207 |
Q |
|
|
||||||||||||||||| ||||||||||| | |||||||||| ||||| || ||||||||||||||| | |||||| ||||| ||||||||||| |||| |
|
|
T |
13688 |
acagcttcacagattataattaacctcattgttaagtcttaatcctaccgaaaggttcaactctcgacaactcgtgcaacaaaagtcgcaaaatctaaca |
13787 |
T |
 |
Q |
208 |
agtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||||||||||||||| |||| |||||||||||||||||| |
|
|
T |
13788 |
agtcactctgtttctgggtcgctcgcgaggcgagagcct |
13826 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0456 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: scaffold0456
Description:
Target: scaffold0456; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 10459 - 10216
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat |
100 |
Q |
|
|
|||||| ||||||| ||||||||| |||||||||| ||||||||| |||||||||||||||||||| ||||||| ||||||||||||| |||| |||| |
|
|
T |
10459 |
cataataatatcaatttcaattcaacaacatcttaa--gtatacaaatattcttcaagtaatgcataatcattatatcacatcataatcatcaacgacat |
10362 |
T |
 |
Q |
101 |
atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa |
200 |
Q |
|
|
||||||| ||||||||||||||||| ||||||| ||| | ||||||||||||||||||||||||||||||||||| | |||||| |||| |||||||||| |
|
|
T |
10361 |
atcttatacagcttcacagattataattaaccttattattaagtcttaattctacccaagggttcaactctcgacaactcgtgcaacaatggtcgcaaaa |
10262 |
T |
 |
Q |
201 |
tccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|| ||||||||||||||||||| ||||||||||||||||||||||| |
|
|
T |
10261 |
tctaacaagtcactctgtttctgggtcactcgcgaggcgagagcct |
10216 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0114 (Bit Score: 151; Significance: 5e-80; HSPs: 2)
Name: scaffold0114
Description:
Target: scaffold0114; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 15498 - 15255
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat |
100 |
Q |
|
|
|||||| ||||||| |||||||||||||||||||| |||||| ||| ||||||||||||||||||||| |||||| ||||||||||||| ||||||||| |
|
|
T |
15498 |
cataataatatcaatttcaattcatcaacatctta--tgtataaaaatattcttcaagtaatgcataaatattatatcacatcataatcatcaacaacat |
15401 |
T |
 |
Q |
101 |
atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa |
200 |
Q |
|
|
||||||| ||||||||||||||||| ||||||| ||| | |||||||||| |||||||| | |||||||||||| | |||||| ||||||||||||||| |
|
|
T |
15400 |
atcttatacagcttcacagattataattaaccttattattaagtcttaatcctacccaacgagtcaactctcgacaactcgtgcaacaaaggtcgcaaaa |
15301 |
T |
 |
Q |
201 |
tccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|| ||||||||||||||||||| ||||||||||||||||||||||| |
|
|
T |
15300 |
tctaacaagtcactctgtttctgggtcactcgcgaggcgagagcct |
15255 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0114; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 7378 - 7465
Alignment:
Q |
2 |
ataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaac |
92 |
Q |
|
|
||||||||| |||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||| |||||||| ||||| |
|
|
T |
7378 |
ataattata-caaattcaattcatcaacatctta--tgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaac |
7465 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 141; Significance: 5e-74; HSPs: 19)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 19 - 246
Target Start/End: Complemental strand, 21292985 - 21292760
Alignment:
Q |
19 |
aattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagcttcaca |
118 |
Q |
|
|
|||||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| || ||||||| |
|
|
T |
21292985 |
aattcatcaacatcttag--gtatacaattattcttcaagtaatgcataaacattatatcacatcataatcatcaacaacatatcttatacaacttcaca |
21292888 |
T |
 |
Q |
119 |
gattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgt |
218 |
Q |
|
|
||||||| ||||||||||| | |||||||||| |||||||||||| |||||| |||| | |||||| ||||||||||||||||| || |||||||||| | |
|
|
T |
21292887 |
gattataattaacctcattattaagtcttaatcctacccaagggtccaactcccgacaactcgtgcaacaaaggtcgcaaaatctaaaaagtcactctat |
21292788 |
T |
 |
Q |
219 |
ttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||| ||||||||||||||||||||||| |
|
|
T |
21292787 |
ttctgggtcactcgcgaggcgagagcct |
21292760 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 8286876 - 8286632
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||| | |||||||||||||||||| || | |||||||||||||||||||||| | ||||||||| |||||||||||||||| ||||| |
|
|
T |
8286876 |
cataataatatcaattgcaattcatcaacatcttaaat--aatcaaacattcttcaagtaatgcacataacattatatcacatcataatcaacatcaaca |
8286779 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| |||||||||| | |||| ||||| || | | |||||||||| |||||||| |||||||||||| || | || || |||||||||||||| |
|
|
T |
8286778 |
catcttaaacagcttcacataatataattaacatcttcattaagtcttaatactacccaaaggttcaactctcaacaactcaagcaacaaaggtcgcaaa |
8286679 |
T |
 |
Q |
200 |
atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||| ||||||||||||||||||| ||||||||||||||||||||||| |
|
|
T |
8286678 |
atctaacaagtcactctgtttctgggtcactcgcgaggcgagagcct |
8286632 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 23390530 - 23390286
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||| | |||||||||||||||||| || || |||| ||||||||||||||||| | ||||||||| |||||||||||||||| ||||| |
|
|
T |
23390530 |
cataataatatcaattgcaattcatcaacatcttaaat--attcaaatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaaca |
23390433 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| |||||||||||||||| ||||| || | | |||||||||| ||| || | ||||||||||||||| | |||||| ||||||||| |||| |
|
|
T |
23390432 |
catcttaaatagcttcacagattataattaacatcctcattaagtcttaatactatcccaaggttcaactctcgacaactcgtgcaacaaaggtcacaaa |
23390333 |
T |
 |
Q |
200 |
atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||| |||||| |||||||||| ||||||||| ||||||| ||||| |
|
|
T |
23390332 |
atctaacaaggcactctgttttagggtcactcgtgaggcgatagcct |
23390286 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 22075106 - 22075350
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaa-cattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||| | ||||||| |||||||||| || || |||| | | |||||||||||||||| ||||||| |||||||||||||||||||||| |
|
|
T |
22075106 |
cataataatatcaattgcaattcaacaacatcttaaat--attcaaataattctcaagtaatgcataaaacattatatcacatcataatcaacaacaaca |
22075203 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| |||||||||| |||||| |||||||| | | |||||||||| |||||||| |||| || ||| || | |||||| |||||||||||||| |
|
|
T |
22075204 |
catcttaaacagcttcacatattataattaacctcttcattaagtcttaatgctacccaaaggtttaatcctcaacaactcgtgcaacaaaggtcgcaaa |
22075303 |
T |
 |
Q |
200 |
atccaacaagtcactctg-tttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
| | |||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
T |
22075304 |
a-ctaacaagtcactctgttttctgggtcactcgcgaggcgagagcct |
22075350 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 52 - 246
Target Start/End: Original strand, 25421668 - 25421864
Alignment:
Q |
52 |
cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat |
150 |
Q |
|
|
|||||||||||||| | ||||||||| |||||||||||||||| |||| |||||| ||||||||||||||||| ||||| |||| | |||||| ||| |
|
|
T |
25421668 |
cttcaagtaatgcacataacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacagattataattaacatcatcattaagtctcaat |
25421767 |
T |
 |
Q |
151 |
tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||| | |||||||||||| || | |||||| |||||||||||||||||| |||||| ||||| |||||| ||||||||||||||||||||||| |
|
|
T |
25421768 |
gctaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactcggtttctaggtcactcgcgaggcgagagcct |
25421864 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 68 - 246
Target Start/End: Original strand, 13025463 - 13025642
Alignment:
Q |
68 |
aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaa |
167 |
Q |
|
|
||||||||| |||||| ||||||||| |||||||||||| || ||||||| |||||| ||||| |||| | |||||||||| |||||| | ||||||| |
|
|
T |
13025463 |
aacattatatcacatcgtaatcaacatcaacatatcttaaacaacttcacatattataattaacatcatcattaagtcttaatactaccccaaggttcaa |
13025562 |
T |
 |
Q |
168 |
ctctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||||| || |||||||| ||||||||||||||| || ||||||||||||||||||| |||||||||||||||||| |||| |
|
|
T |
13025563 |
ctctcaacaaatcgtgcaacaaaggtcgcaaaaacctaacaagtcactctgtttctaggtcactcgcgaggcgagggcct |
13025642 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 68 - 246
Target Start/End: Original strand, 13095647 - 13095826
Alignment:
Q |
68 |
aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaa |
167 |
Q |
|
|
||||||||| |||||| ||||||||| |||||||||||| || ||||||| |||||| ||||| |||| | |||||||||| |||||| | ||||||| |
|
|
T |
13095647 |
aacattatatcacatcgtaatcaacatcaacatatcttaaacaacttcacatattataattaacatcatcattaagtcttaatactaccccaaggttcaa |
13095746 |
T |
 |
Q |
168 |
ctctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||||| |||| |||||| ||||||||||||||| || ||||||||||||||||||| |||||||||||||||||| |||| |
|
|
T |
13095747 |
ctctcaacgactcgtgcaacaaaggtcgcaaaaacctaacaagtcactctgtttctaggtcactcgcgaggcgagggcct |
13095826 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 24493655 - 24493900
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||||| ||| ||| |||||||||| || || ||| || |||||||| ||||| | ||||||||| |||||||||||||||| ||||| |
|
|
T |
24493655 |
cataataatatcaaatgcaagtcaacaacatcttaaat--attcaattatacttcaagtgatgcacataacattatatcacatcataatcaacatcaaca |
24493752 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
||||||| |||||||||||||||| ||||| ||||| | |||||||||| |||||| | |||||||||||| || | |||||| |||||||||||||| |
|
|
T |
24493753 |
tatcttaaatagcttcacagattataattaacatcattattaagtcttaatactaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaa |
24493852 |
T |
 |
Q |
200 |
atcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
| || |||||| |||||||||| | ||| |||| |||||||| ||||| |
|
|
T |
24493853 |
aacctaacaagacactctgtttatgggttactcacgaggcgaaagcct |
24493900 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 24529307 - 24529552
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||||| ||| ||| |||||||||| || |||||| ||| ||||||||||| || ||||||||| ||||||||| |||||| ||||| |
|
|
T |
24529307 |
cataatgatatcaaatgcaagtcaacaacatctta-at-tatacattcatatctcaagtaatgcttataacattatatcacatcatattcaacatcaaca |
24529404 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| ||||||||||||||||||||||| |||| | |||| | ||| |||||| | |||||||||||| || | | |||| |||||||||||||| |
|
|
T |
24529405 |
catcttaaacagcttcacagattatagttaacatcatcattaagtttcaatactaccccaaggttcaactctcaactactagtgcaacaaaggtcgcaaa |
24529504 |
T |
 |
Q |
200 |
atcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
| || |||||| | |||||||||| ||||||||||||||||||||||| |
|
|
T |
24529505 |
aacctaacaagactctctgtttctgggtcactcgcgaggcgagagcct |
24529552 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 54 - 246
Target Start/End: Original strand, 9078090 - 9078284
Alignment:
Q |
54 |
tcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattc |
152 |
Q |
|
|
||||||||||| || ||||||||| |||||||||||||||| ||||| |||||| ||||||||||||||||| ||||| |||| | |||||| ||| | |
|
|
T |
9078090 |
tcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagtctcaatac |
9078189 |
T |
 |
Q |
153 |
tacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||||| | |||||||| || || | | |||||||| || ||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| |
|
|
T |
9078190 |
taccccaaggttcaacccttaacaacttgtgcgacacagatcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcct |
9078284 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 54 - 246
Target Start/End: Complemental strand, 21986130 - 21985936
Alignment:
Q |
54 |
tcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattc |
152 |
Q |
|
|
|||||||||||||| |||||| || ||| ||||| |||||| ||||| |||||| || ||||||| |||||||||||| |||| |||||||| ||| | |
|
|
T |
21986130 |
tcaagtaatgcatataacattttatcacctcatattcaacatcaacacatcttaaacaacttcacaaattatagttaacatcatcatcaagtctgaatac |
21986031 |
T |
 |
Q |
153 |
tacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||||| | |||||||||||| || | |||||| ||||||||||||||| || |||||| |||||||||||| |||||||||||||||||| |||| |
|
|
T |
21986030 |
taccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaacaagacactctgtttctgggtcactcgcgaggcgagggcct |
21985936 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 53 - 246
Target Start/End: Complemental strand, 22107357 - 22107163
Alignment:
Q |
53 |
ttcaagtaatgcataa-acattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaatt |
151 |
Q |
|
|
|||||||||||||||| | |||||| |||||||||||||||||||||| | |||| ||||||||||||||||| |||||||| | | |||||||||| |
|
|
T |
22107357 |
ttcaagtaatgcataatatattatatcacatcataatcaacaacaacacaccttaaacagcttcacagattataattaacctcttcattaagtcttaata |
22107258 |
T |
 |
Q |
152 |
ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||| ||| |||||| ||||| || | |||||| |||||||||||||| | ||||| |||||| |||| ||||||||||||||||||||||| |
|
|
T |
22107257 |
ctactcaaaggttcatctctcaacaactcgtgcaacaaaggtcgcaaagtatcacaaggcactctatttccgggtcactcgcgaggcgagagcct |
22107163 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 52 - 246
Target Start/End: Original strand, 25431530 - 25431726
Alignment:
Q |
52 |
cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat |
150 |
Q |
|
|
|||||||||||||| | ||||||||| |||||||||||||||| |||| |||||| ||||||||||||||||| ||||| |||| | |||||| ||| |
|
|
T |
25431530 |
cttcaagtaatgcacataacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacagattataattaacatcatcattaagtctcaat |
25431629 |
T |
 |
Q |
151 |
tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||||| | |||||||||||| || | ||||| |||||||||||||||||| |||||| ||||| ||||| |||||||||||||| |||||||| |
|
|
T |
25431630 |
gctacctcaaggttcaactctcaacaactcgtgtaacaaaggtcgcaaaatcctaacaaggcactcgatttctgggtcactcgcgaggtgagagcct |
25431726 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 18770024 - 18769910
Alignment:
Q |
14 |
aattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagct |
113 |
Q |
|
|
|||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||| |||||||| |||||| ||||| || || |||||| |
|
|
T |
18770024 |
aattcaattcatcaacatctta--tgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaacacaaacatctcata-tcagct |
18769928 |
T |
 |
Q |
114 |
tcacagattatagttaac |
131 |
Q |
|
|
||||||||| ||||||| |
|
|
T |
18769927 |
tcacagattgcagttaac |
18769910 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 22032415 - 22032529
Alignment:
Q |
14 |
aattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagct |
113 |
Q |
|
|
|||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||| |||||||| |||||| ||||| || || |||||| |
|
|
T |
22032415 |
aattcaattcatcaacatctta--tgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaacacaaacatctcgta-tcagct |
22032511 |
T |
 |
Q |
114 |
tcacagattatagttaac |
131 |
Q |
|
|
||||||||| ||||||| |
|
|
T |
22032512 |
tcacagattgcagttaac |
22032529 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 1096554 - 1096799
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||||| ||| ||| |||||||| | || ||||| ||| ||||||||||||||| ||||||||| |||||||||||||||| |||| |
|
|
T |
1096554 |
cataataatatcaaatgcaaatcaacaacatctcacat--atacattcataattcaagtaatgcatataacattatatcacatcataatcaacatcaacg |
1096651 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| |||||||| || ||||| ||||| || | | |||||| ||| |||||| | ||| ||||| | || | | |||||||| || ||||||| |
|
|
T |
1096652 |
catcttaaacagcttcataggttataattaacatcctcattaagtctcaatactaccccaaggtccaacttttaacaacttgtgcgacagagatcgcaaa |
1096751 |
T |
 |
Q |
200 |
atcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|| | || ||| || ||||||||| ||||||||||||||||||||||| |
|
|
T |
1096752 |
attctaaaaaggcattctgtttctgggtcactcgcgaggcgagagcct |
1096799 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 23572178 - 23572254
Alignment:
Q |
14 |
aattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaac |
92 |
Q |
|
|
|||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||| |||||||||||||| |
|
|
T |
23572178 |
aattcaattcatcaacatctta--tgtatacaattaatcttcaagtaatgcataaacattataatacatcataatcaac |
23572254 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 246
Target Start/End: Complemental strand, 36154712 - 36154617
Alignment:
Q |
152 |
ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc--aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||| | |||||||||||| |||| ||||||||||||| ||||||||||| |||||| || ||||| | ||||||||||||||||||||||| |
|
|
T |
36154712 |
ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattctgtaaataggtcactcgcgaggcgagagcct |
36154617 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 130
Target Start/End: Original strand, 22412337 - 22412388
Alignment:
Q |
79 |
acatcataatcaacaacaacatatcttattcagcttcacagattatagttaa |
130 |
Q |
|
|
||||||||||||||| ||||| |||||| ||||||||||||||||| |||| |
|
|
T |
22412337 |
acatcataatcaacatcaacacatcttaaacagcttcacagattataattaa |
22412388 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 133; Significance: 3e-69; HSPs: 23)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 3 - 246
Target Start/End: Complemental strand, 20698467 - 20698226
Alignment:
Q |
3 |
taattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacatat |
102 |
Q |
|
|
|||| ||||||| | |||||||||||||||||| || || |||| |||||||||||||||||||||||||||| ||||||||||||||| ||||| || |
|
|
T |
20698467 |
taataatatcaattgcaattcatcaacatcttatat--attcaaatattcttcaagtaatgcataaacattatatcacatcataatcaacttcaacacat |
20698370 |
T |
 |
Q |
103 |
cttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatc |
202 |
Q |
|
|
||| ||||||||||||||||| ||||| |||| | |||||||||||||| |||| ||||||||||||||| | |||||| ||||||||||||||||| |
|
|
T |
20698369 |
cttgaacagcttcacagattataattaacatcatcattaagtcttaattctatccaaaggttcaactctcgacaactcgtgccacaaaggtcgcaaaatc |
20698270 |
T |
 |
Q |
203 |
caacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||||||||||||||||||| ||||||||||||||||||||||| |
|
|
T |
20698269 |
taacaagtcactctgtttctgggtcactcgcgaggcgagagcct |
20698226 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 13442361 - 13442605
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||| | |||||||||||||||||| || || |||| ||||||||||||||||| | ||||||||| |||||||||||||||| ||||| |
|
|
T |
13442361 |
cataataatatcaattgcaattcatcaacatcttaaat--attcaaatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaaca |
13442458 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaat-tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaa |
198 |
Q |
|
|
|||||| ||||||||||||||||| ||||| |||| | |||||||||| || ||||||| ||||||||||||| | |||||| ||||||||||||| |
|
|
T |
13442459 |
catcttaaacagcttcacagattataattaacatcatcattaagtcttaatgtcatcccaagg-ttcaactctcgacaactcgtgcaacaaaggtcgcaa |
13442557 |
T |
 |
Q |
199 |
aatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||| |||||| |||||||||||| ||||||||||||||||||||||| |
|
|
T |
13442558 |
aatctaacaaggcactctgtttctgggtcactcgcgaggcgagagcct |
13442605 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 17487943 - 17488188
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||| | |||||||||||||||||| || || |||| ||||||||||||||||||| ||||||||| |||||||||||||||| ||||| |
|
|
T |
17487943 |
cataataatatcaattgcaattcatcaacatcttaaat--attcaaatattcttcaagtaatgcatataacattatatcacatcataatcaacatcaaca |
17488040 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| ||| ||||||||||||| ||||| |||| | |||||||||| ||| || | ||||||||||||||| | |||||| |||||||||||||| |
|
|
T |
17488041 |
catcttaaacagattcacagattataattaacatcatcattaagtcttaatgctatcccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaa |
17488140 |
T |
 |
Q |
200 |
atccaacaagtcactctg-tttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||| |||||| ||||||| ||||| ||||||||||||||||||||||| |
|
|
T |
17488141 |
atctaacaaggcactctgttttctaggtcactcgcgaggcgagagcct |
17488188 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 17499425 - 17499670
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||| | |||||||||||||||||| || || |||| ||||||||||||||||||| ||||||||| ||||||| |||||||| ||||| |
|
|
T |
17499425 |
cataataatatcaattgcaattcatcaacatcttaaat--attcaaatattcttcaagtaatgcatataacattatatcacatcaaaatcaacatcaaca |
17499522 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| ||| |||||| |||||| ||||| |||| | |||||||||| ||| || | ||||||||||||||| | |||||| |||||||||||||| |
|
|
T |
17499523 |
catcttaaacagattcacaaattataattaacatcatcattaagtcttaatgctatcccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaa |
17499622 |
T |
 |
Q |
200 |
atccaacaagtcactctg-tttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||| |||||| ||||||| ||||| ||||||| | ||||||||||||| |
|
|
T |
17499623 |
atctaacaaggcactctgttttctaggtcactagagaggcgagagcct |
17499670 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 52 - 246
Target Start/End: Complemental strand, 14576818 - 14576622
Alignment:
Q |
52 |
cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat |
150 |
Q |
|
|
|||||||||||||||| ||||||||| |||||||||||||||| ||||| |||||| || |||||||||||||| ||||| |||| | || ||||||| |
|
|
T |
14576818 |
cttcaagtaatgcatataacattatatcacatcataatcaacatcaacacatcttaaacaacttcacagattataattaacatcatcattaaatcttaat |
14576719 |
T |
 |
Q |
151 |
tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||| | |||||||||||| || | |||||| |||||||||||||||||| |||||| |||| ||||||| ||||||||||||||||||||||| |
|
|
T |
14576718 |
actaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactttgtttctaggtcactcgcgaggcgagagcct |
14576622 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 54 - 246
Target Start/End: Original strand, 18438672 - 18438866
Alignment:
Q |
54 |
tcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattc |
152 |
Q |
|
|
|||||||||||||| ||||||||| ||||||||| |||||| ||||| |||||| ||||||||||||||||||||||| |||| | |||||| ||| | |
|
|
T |
18438672 |
tcaagtaatgcatataacattatatcacatcatattcaacatcaacacatcttaaacagcttcacagattatagttaacatcatcattaagtctcaatac |
18438771 |
T |
 |
Q |
153 |
tacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||||| | |||||||| ||| || | |||||| ||||||||||||||| || |||||| |||||||||||| ||||||||||||||||||||||| |
|
|
T |
18438772 |
taccccaaggttcaacactcaacaactcgtgcaacaaaggtcgcaaaaacctaacaagacactctgtttctgggtcactcgcgaggcgagagcct |
18438866 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 55 - 246
Target Start/End: Complemental strand, 40213703 - 40213510
Alignment:
Q |
55 |
caagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattct |
153 |
Q |
|
|
|||||||||| || ||||||||| |||||||||||||||| ||||| |||||| |||||| |||||||||| ||||| |||| | |||||| ||| || |
|
|
T |
40213703 |
caagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagctttacagattataattaacatcatcattaagtctcaatact |
40213604 |
T |
 |
Q |
154 |
acccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||| | |||| ||||||| || | |||||| |||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| |
|
|
T |
40213603 |
accccaaggttaaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcct |
40213510 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 52 - 246
Target Start/End: Original strand, 26687023 - 26687218
Alignment:
Q |
52 |
cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat |
150 |
Q |
|
|
|||||||||||||| | ||||||||| |||| ||||||||||| ||||| |||||| ||||||||||||||||| ||||| || | | ||||| ||| |
|
|
T |
26687023 |
cttcaagtaatgcacataacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcattaagtcccaat |
26687122 |
T |
 |
Q |
151 |
tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||| | ||||||||||| |||| |||||| |||||||||| |||| | |||||| |||||||||||| ||||||||||||||||||||||| |
|
|
T |
26687123 |
actaccccaaagttcaactctcaacgattcgtgcaacaaaggtcgtaaaacctaacaagacactctgtttctgggtcactcgcgaggcgagagcct |
26687218 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 54 - 243
Target Start/End: Original strand, 16796685 - 16796875
Alignment:
Q |
54 |
tcaagtaatgcataaa-cattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattc |
152 |
Q |
|
|
|||||||||||||||| ||||||| |||||||||||||| ||||||| |||||| || ||||||| |||||| ||| |||| | | |||||||||| | |
|
|
T |
16796685 |
tcaagtaatgcataaaacattatatcacatcataatcaaaaacaacacatcttaaacaacttcacatattataattagcctcttcattaagtcttaatgc |
16796784 |
T |
 |
Q |
153 |
tacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagag |
243 |
Q |
|
|
||||||| ||||||||||| || | |||||| |||||||||||||| || ||||| ||||||||||| |||||||||||||||||||| |
|
|
T |
16796785 |
tacccaaaggttcaactcttaacaattcgtgcaacaaaggtcgcaaagtctcacaaggcactctgtttccgggtcactcgcgaggcgagag |
16796875 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 12399296 - 12399537
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataa-acattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||||| ||||||| |||||||||| || || |||| | | ||||||||||||||| |||||||| |||||||||||||||||||||| |
|
|
T |
12399296 |
cataataatatcaaatgcaattcaacaacatcttaaat--attcaaataattctcaagtaatgcataagacattatatcacatcataatcaacaacaaca |
12399393 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| ||||||||||||||||||||||||| | | | |||||||| |||||||| || | || | | || | |||||| |||||||||| ||| |
|
|
T |
12399394 |
catcttaaatagcttcacagattatagttaacctcttcattatgtcttaatgctacccaaaggcttaatccccaacaactcgtgcaacaaaggtcggaaa |
12399493 |
T |
 |
Q |
200 |
atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
| | ||||||||| |||||||| ||||||||| ||||||||||||| |
|
|
T |
12399494 |
a-ctaacaagtca--ctgtttctgggtcactcgtgaggcgagagcct |
12399537 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 67 - 246
Target Start/End: Original strand, 14572740 - 14572920
Alignment:
Q |
67 |
aaacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttca |
166 |
Q |
|
|
|||||||||| |||||||||| ||||| |||| |||||| || ||||||| |||||| ||||| |||| | |||||||||| |||||| | |||||| |
|
|
T |
14572740 |
aaacattatatcacatcataaacaacataaacaaatcttaaacaacttcacaaattataattaacatcatcattaagtcttaatactaccccaaggttca |
14572839 |
T |
 |
Q |
167 |
actctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||| || | |||||| ||||||||||||||| || |||||| ||||||||||| ||||||||||||||||||||||| |
|
|
T |
14572840 |
actctcaacaactcgtgcaacaaaggtcgcaaaaacctaacaaggtactctgtttctaggtcactcgcgaggcgagagcct |
14572920 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 14972941 - 14973186
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||||| ||| ||| |||||||| | || ||||| ||| ||||||||||||||| ||||||||| |||||||||||||||| ||||| |
|
|
T |
14972941 |
cataataatatcaaatgcaaatcaacaacatctcatat--atacattcataattcaagtaatgcatataacattatatcacatcataatcaacatcaaca |
14973038 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| |||||||| |||||||| ||||| |||| | |||||| ||| |||||| | ||||||||||| | | | |||||||| | ||||||| |
|
|
T |
14973039 |
catcttaaacagcttcatagattataattaacatcatcattaagtctcaatactaccccaaggttcaactcttagcaacttgtgcgacacaaatcgcaaa |
14973138 |
T |
 |
Q |
200 |
atcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||| |||||| |||||||||||| ||||||| ||||||||||||||| |
|
|
T |
14973139 |
atcctaacaaggcactctgtttctgggtcacttgcgaggcgagagcct |
14973186 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 25476419 - 25476174
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||||| ||| ||| |||||||| | ||||||| ||| |||||||||||| | ||||||||| |||||||| |||| || ||||| |
|
|
T |
25476419 |
cataataatatcaaatgcaagtcaacaacatctcaa--gtatacattcataattcaagtaatgcgcataacattatatcacatcattatcatcatcaaca |
25476322 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| |||||||||||||| || ||||| || | | |||||| ||| ||||| | |||||||||||| || | |||||| |||||||||||||| |
|
|
T |
25476321 |
catcttaaacagcttcacagattgtaattaacatcctcattaagtctcaatactacctcaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaa |
25476222 |
T |
 |
Q |
200 |
atcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||| |||||| |||||||||||| ||||||||||||||||||||||| |
|
|
T |
25476221 |
atcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcct |
25476174 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 53 - 246
Target Start/End: Complemental strand, 11424747 - 11424552
Alignment:
Q |
53 |
ttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaatt |
151 |
Q |
|
|
|||||||||||| || ||||||||| |||||||||| |||| ||||| |||||| ||||||||||||||| | ||||| ||| | |||||| ||| |
|
|
T |
11424747 |
ttcaagtaatgcgtataacattatatcacatcataaacaacttcaacacatcttaaacagcttcacagattaaaattaacatcaacattaagtctcaata |
11424648 |
T |
 |
Q |
152 |
ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||| | ||||||||||| || | |||||| ||||||||||||||| || |||||| |||||||||||| |||| |||||||||||||||||| |
|
|
T |
11424647 |
ctaccccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaacaagacactctgtttctaggtcgctcgcgaggcgagagcct |
11424552 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 52 - 246
Target Start/End: Complemental strand, 23083346 - 23083151
Alignment:
Q |
52 |
cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat |
150 |
Q |
|
|
|||| ||||||||| | ||||||||| |||||||||||||| | ||||| |||||| |||||||||||||| || ||||| |||| |||||||||| |
|
|
T |
23083346 |
cttctagtaatgcacataacattatatcacatcataatcaatatcaacacatcttaaacagcttcacagattgtaattaacatcatcactaagtcttaat |
23083247 |
T |
 |
Q |
151 |
tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||||| | ||||||||||| || | |||||| ||||||||||||||| | |||||| |||| ||||||| ||||| ||||||||||||||||| |
|
|
T |
23083246 |
actacctcaaggttcaactctgaacaactcgtgcaacaaaggtcgcaaaacctaacaagacactatgtttctgggtcattcgcgaggcgagagcct |
23083151 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 52 - 246
Target Start/End: Original strand, 43841068 - 43841263
Alignment:
Q |
52 |
cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat |
150 |
Q |
|
|
|||||||||||||| | ||||||||| |||| ||||||||||| ||||| |||||| ||||||||||||||||| ||||| || | | ||||| ||| |
|
|
T |
43841068 |
cttcaagtaatgcacataacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcgttaagtcccaat |
43841167 |
T |
 |
Q |
151 |
tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||| | || ||||||| || | ||||| ||||||||||||||| | |||||| |||||||||||| |||||||||||||||||| |||| |
|
|
T |
43841168 |
actaccccaaagtcaaactctcaacaactcgtgtaacaaaggtcgcaaaacctaacaagacactctgtttctgggtcactcgcgaggcgagggcct |
43841263 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 52 - 246
Target Start/End: Original strand, 30029975 - 30030170
Alignment:
Q |
52 |
cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat |
150 |
Q |
|
|
|||||||||||| | | ||||||||| |||||||||||||| ||| | |||||| |||||||||| |||||| | ||| |||| | ||||||||| |
|
|
T |
30029975 |
cttcaagtaatgtacacaacattatatcacatcataatcaatgtcaaaacatcttaaacagcttcacatattatattaaacatcatcattaagtcttaaa |
30030074 |
T |
 |
Q |
151 |
tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcgg-tcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||||| ||||||||||||||| | |||||| ||||||||||||||||| |||||| || |||| |||| || | ||||||||||||||||||| |
|
|
T |
30030075 |
gctacccaaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaaggcattctg-ttctgggattactcgcgaggcgagagcct |
30030170 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 14179570 - 14179648
Alignment:
Q |
54 |
tcaagtaatgcataaa-cattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaac |
131 |
Q |
|
|
|||||||||||||||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||||||| ||||| |
|
|
T |
14179570 |
tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaac |
14179648 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 53 - 203
Target Start/End: Original strand, 42386547 - 42386699
Alignment:
Q |
53 |
ttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttatt-cagcttcacagattatagttaacctcattctcaagtcttaat |
150 |
Q |
|
|
|||||| |||||||| ||||||||| |||||||||||||||| ||| | |||||| |||||||||||||||| ||||| |||| |||||| ||| |
|
|
T |
42386547 |
ttcaagcaatgcatataacattatatcacatcataatcaacatcaaaacatcttaaaacagcttcacagattatcattaacatcataaacaagtcccaat |
42386646 |
T |
 |
Q |
151 |
tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc |
203 |
Q |
|
|
|||||| | |||||||||| | || | ||||||||||||| ||||||||||| |
|
|
T |
42386647 |
actaccccaaggttcaactcacaacaactcgtgcgacaaagttcgcaaaatcc |
42386699 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 24153243 - 24153115
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||||| ||| ||| |||||||||| || || ||| || |||||| ||||||| | ||||| ||| |||||||||||||||| ||||| |
|
|
T |
24153243 |
cataataatatcaaatgcaagtcaacaacatcttaaat--attcaattatacttcaaataatgcacataacataatatcacatcataatcaacatcaaca |
24153146 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaa |
130 |
Q |
|
|
|||||| ||||||||||||||||| |||| |
|
|
T |
24153145 |
catcttaaacagcttcacagattataattaa |
24153115 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 856234 - 856348
Alignment:
Q |
14 |
aattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagct |
113 |
Q |
|
|
||||||||||| |||||||||| ||||||||| | |||||||||||| |||||||||||||| |||||||| || ||| ||||| || || | |||| |
|
|
T |
856234 |
aattcaattcaacaacatctta--tgtatacaattaatcttcaagtaatacataaacattataatacatcatattcgacacaaacatctcata-taagct |
856330 |
T |
 |
Q |
114 |
tcacagattatagttaac |
131 |
Q |
|
|
||||||||| ||||||| |
|
|
T |
856331 |
tcacagattgcagttaac |
856348 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 246
Target Start/End: Complemental strand, 17248161 - 17248075
Alignment:
Q |
161 |
ggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc--aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||| ||||||| |||| ||||||||||||| ||||||||| | |||||| || ||||| || ||||||||||||||||||||||| |
|
|
T |
17248161 |
ggtttaactctcaacgactcgtgcgacaaagatcgcaaaattctaaacaag-cattctgtaactgggtcactcgcgaggcgagagcct |
17248075 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 53070582 - 53070531
Alignment:
Q |
152 |
ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc |
203 |
Q |
|
|
|||||| | |||||||||||| |||| ||||||||||||| ||||||||||| |
|
|
T |
53070582 |
ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcc |
53070531 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1842 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: scaffold1842
Description:
Target: scaffold1842; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 1082 - 839
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat |
100 |
Q |
|
|
|||||| ||||||| | |||||||||||||||||| || || |||| ||| |||||||||||||||||||||||| ||||||||||||||| | |||| |
|
|
T |
1082 |
cataataatatcaattgcaattcatcaacatcttaaat--attcaaatattattcaagtaatgcataaacattatatcacatcataatcaaccaaaacac |
985 |
T |
 |
Q |
101 |
atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa |
200 |
Q |
|
|
|||||| |||||||| |||||||| |||||||| | | |||||||||| |||||||| ||||||||||||||| | |||||| ||||||||||||||| |
|
|
T |
984 |
atcttaaacagcttcaaagattataattaacctcttcattaagtcttaatgctacccaaaggttcaactctcgacaattcgtgcaacaaaggtcgcaaaa |
885 |
T |
 |
Q |
201 |
tccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|| ||||||||||||||||||| ||||||||||||||||||||||| |
|
|
T |
884 |
tctaacaagtcactctgtttctgggtcactcgcgaggcgagagcct |
839 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0011 (Bit Score: 131; Significance: 4e-68; HSPs: 2)
Name: scaffold0011
Description:
Target: scaffold0011; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 168012 - 167769
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat |
100 |
Q |
|
|
|||||| ||||||| | |||||||||||||||||| || || |||| ||| |||||||||||||||||||||||| ||||||||||||||| | |||| |
|
|
T |
168012 |
cataataatatcaattgcaattcatcaacatcttaaat--attcaaatattattcaagtaatgcataaacattatatcacatcataatcaaccaaaacac |
167915 |
T |
 |
Q |
101 |
atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa |
200 |
Q |
|
|
|||||| |||||||| |||||||| |||||||| | | |||||||||| |||||||| ||||||||||||||| | |||||| ||||||||||||||| |
|
|
T |
167914 |
atcttaaacagcttcaaagattataattaacctcttcattaagtcttaatgctacccaaaggttcaactctcgacaattcgtgcaacaaaggtcgcaaaa |
167815 |
T |
 |
Q |
201 |
tccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|| ||||||||||||||||||| ||||||||||||||||||||||| |
|
|
T |
167814 |
tctaacaagtcactctgtttctgggtcactcgcgaggcgagagcct |
167769 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0011; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 52 - 246
Target Start/End: Original strand, 52049 - 52243
Alignment:
Q |
52 |
cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat |
150 |
Q |
|
|
|||||||||||||| | ||||||||| |||| ||||||| ||| ||||| |||||| ||||||||||||||||| ||||| |||| | |||||||||| |
|
|
T |
52049 |
cttcaagtaatgcacataacattatatcacaacataatctacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagtcttaat |
52148 |
T |
 |
Q |
151 |
tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||| | |||||||||||| || | |||||| || |||||||||||| | |||||| ||||| |||||| ||||||||||||||||||||||| |
|
|
T |
52149 |
actaccccaaggttcaactctcaacaactcgtgcaac-aaggtcgcaaaacctaacaagacactcagtttctgggtcactcgcgaggcgagagcct |
52243 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0064 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0064
Description:
Target: scaffold0064; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 47080 - 47317
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat |
100 |
Q |
|
|
|||||| ||||||| |||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||| |||||||||| || ||||||||| |
|
|
T |
47080 |
cataataatatcaatttcaattcatcaacatctta--tgtatacaaatattctccaagtaatgcataaacattatatcacatcataaacatcaacaacat |
47177 |
T |
 |
Q |
101 |
atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa |
200 |
Q |
|
|
||||||| ||||||||||||||||| |||||| | |||||||||| |||||||||||||||||||||||| | |||||| ||||||||||| | |
|
|
T |
47178 |
atcttatacagcttcacagattata------ctcattgttaagtcttaatcctacccaagggttcaactctcgacaactcgtgcaacaaaggtcgccatt |
47271 |
T |
 |
Q |
201 |
tccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|| |||||||||||||| || | ||||||||||||||||||||||| |
|
|
T |
47272 |
tctaacaagtcactctggttttgggtcactcgcgaggcgagagcct |
47317 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0358 (Bit Score: 124; Significance: 7e-64; HSPs: 2)
Name: scaffold0358
Description:
Target: scaffold0358; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 23 - 267
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat |
100 |
Q |
|
|
||||| || ||||| | ||||||||||| |||||| |||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||| |
|
|
T |
23 |
cataaatacatcaattgcaattcatcaaaatctta--tgtatacaaatattcttcaagtaaggcataaacattatatcacatcataatcaacaacaacat |
120 |
T |
 |
Q |
101 |
atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgc-aaa |
199 |
Q |
|
|
||||||| || |||||||||||||| ||||||||||| | |||||||||| |||||||| ||||||||| ||||| | |||||| |||||||| || ||| |
|
|
T |
121 |
atcttatacaacttcacagattatacttaacctcattgttaagtcttaatcctacccaaaggttcaactgtcgacaactcgtgcaacaaaggttgcaaaa |
220 |
T |
 |
Q |
200 |
atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||| ||||||||||||| || | ||||||| ||||||||||||||| |
|
|
T |
221 |
atctaacaagtcactcttattatgggtcacttgcgaggcgagagcct |
267 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0358; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 4799 - 5043
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacat |
100 |
Q |
|
|
||||| || ||||| | ||||||||||| |||||| |||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||| |
|
|
T |
4799 |
cataaatacatcaattgcaattcatcaaaatctta--tgtatacaaatattcttcaagtaaggcataaacattatatcacatcataatcaacaacaacat |
4896 |
T |
 |
Q |
101 |
atcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgc-aaa |
199 |
Q |
|
|
||||||| || |||||||||||||| ||||||||||| | |||||||||| |||||||| ||||||||| ||||| | |||||| |||||||| || ||| |
|
|
T |
4897 |
atcttatacaacttcacagattatacttaacctcattgttaagtcttaatcctacccaaaggttcaactgtcgacaactcgtgcaacaaaggttgcaaaa |
4996 |
T |
 |
Q |
200 |
atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||| ||||||||||||| || | ||||||| ||||||||||||||| |
|
|
T |
4997 |
atctaacaagtcactcttattatgggtcacttgcgaggcgagagcct |
5043 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0490 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0490
Description:
Target: scaffold0490; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 2039 - 2283
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaa-cattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||| | ||||||| |||||||||| || || |||||||| ||||||||||||||||| ||||||| | |||||||||||||||||||| |
|
|
T |
2039 |
cataatgatatcaattgcaattcaacaacatcttaaat--attcaaacattattcaagtaatgcataaaacattatatctcatcataatcaacaacaaca |
2136 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||| ||| |||||| ||| ||||| |||||| || | |||||||||| |||||||| ||||||||||||||| | |||||| |||||||||||||| |
|
|
T |
2137 |
tatcatatacagctttacatattattaataaccttatcattaagtcttaatcctacccaaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaa |
2236 |
T |
 |
Q |
200 |
atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||| |||| |||||||||||||| ||||||||||||||||||||||| |
|
|
T |
2237 |
atctaacatgtcactctgtttctaggtcactcgcgaggcgagagcct |
2283 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0309 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0309
Description:
Target: scaffold0309; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 6697 - 6941
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaa-cattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||| ||||||| |||||||||| || || |||||||| ||||||||||||||||| | ||||| |||||||||||||||||||||| |
|
|
T |
6697 |
cataatgatatcaatagcaattcaacaacatcttaaat--attcaaacattattcaagtaatgcataaaacgttatatcacatcataatcaacaacaaca |
6794 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||| ||| |||||| |||||||||| |||||| || | || ||||||| |||||||| ||||||||||||||| | |||||| |||||||||||||| |
|
|
T |
6795 |
tatcatatacagctttacagattataaataaccttatcattaaatcttaatcctacccaaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaa |
6894 |
T |
 |
Q |
200 |
atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||| |||| |||||||||||| | ||||||||||||||||||||||| |
|
|
T |
6895 |
atctaacatgtcactctgtttatgggtcactcgcgaggcgagagcct |
6941 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0193 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0193
Description:
Target: scaffold0193; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 13298 - 13542
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||| | |||||||||||||||||| || || |||| ||||||||||||||||||| ||||||||| |||||||||||||||| ||||| |
|
|
T |
13298 |
cataataatatcaattgcaattcatcaacatcttaaat--attcaaatattcttcaagtaatgcatataacattatatcacatcataatcaacatcaaca |
13395 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| |||||||||| |||||| ||||| |||| | |||||||||| ||| || | ||||||||| ||||| | |||||| |||||||||||||| |
|
|
T |
13396 |
catcttaaacagcttcacaaattataattaacatcatcattaagtcttaatgctatcccaaggttcaactgtcgacaactcgtgcaacaaaggtcgcaaa |
13495 |
T |
 |
Q |
200 |
atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||| |||||| ||||||| |||| ||||||||||||||||||||||| |
|
|
T |
13496 |
atctaacaaggcactctgattctaggtcactcgcgaggcgagagcct |
13542 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0021 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0021
Description:
Target: scaffold0021; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 8 - 246
Target Start/End: Original strand, 124679 - 124916
Alignment:
Q |
8 |
atatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatctta |
106 |
Q |
|
|
||||||| | |||||||||||| | ||| || || |||| ||||||||||||||||||| ||||||||| |||||||||||||||| ||||| |||||| |
|
|
T |
124679 |
atatcaattgcaattcatcaacgttttaaat--attcaaatattcttcaagtaatgcatataacattatatcacatcataatcaacatcaacacatctta |
124776 |
T |
 |
Q |
107 |
ttcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaac |
206 |
Q |
|
|
||||||||||||||||| ||||| || | | |||||||||| ||| || | ||||||||||||||| | |||||| ||||||||||||||||| ||| |
|
|
T |
124777 |
aacagcttcacagattataattaacatcctcattaagtcttaatgctatcccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaac |
124876 |
T |
 |
Q |
207 |
aagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||| |||||| ||||| ||||||||||||||||||||||| |
|
|
T |
124877 |
aagacactctttttctgggtcactcgcgaggcgagagcct |
124916 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0145 (Bit Score: 97; Significance: 9e-48; HSPs: 2)
Name: scaffold0145
Description:
Target: scaffold0145; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 52 - 246
Target Start/End: Original strand, 38896 - 39092
Alignment:
Q |
52 |
cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat |
150 |
Q |
|
|
|||||||||||||| | ||||||||| |||||||||||||||| ||||| |||||| ||||||||||||||||| ||||| |||| | |||||||||| |
|
|
T |
38896 |
cttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagtcttaat |
38995 |
T |
 |
Q |
151 |
tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||| | |||||||||||| || | |||||| ||||||||||||||| || ||||||||||| ||||||| ||||||||||||||||||||||| |
|
|
T |
38996 |
actaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaacaagtcactatgtttctgggtcactcgcgaggcgagagcct |
39092 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0145; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 125
Target Start/End: Original strand, 33077 - 33151
Alignment:
Q |
52 |
cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattata |
125 |
Q |
|
|
|||||||||||||| | ||||||||| |||||||||||||||| ||||| |||||| ||||||||||||||||| |
|
|
T |
33077 |
cttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattata |
33151 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0292 (Bit Score: 96; Significance: 3e-47; HSPs: 2)
Name: scaffold0292
Description:
Target: scaffold0292; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 3557 - 3801
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||| | |||||||||||||||||| || || |||| ||||||||||||||||| | ||||||||| |||||||||||||||| ||||| |
|
|
T |
3557 |
cataataatatcaattgcaattcatcaacatcttaaat--attcaaatattcttcaagtaatgcaaataacattatatcacatcataatcaacatcaaca |
3654 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| |||||||| |||||||| ||||| || | | |||||||||| |||||| | |||||| |||| || | |||||| |||||||||||||| |
|
|
T |
3655 |
catcttaaacagcttcatagattataattaacatcctcattaagtcttaatactaccccaaagttcaattctcaacaactcgtgcaacaaaggtcgcaaa |
3754 |
T |
 |
Q |
200 |
atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
| | ||||| ||||||||||| | ||||||||||||||||||||||| |
|
|
T |
3755 |
acctaacaactcactctgtttttgggtcactcgcgaggcgagagcct |
3801 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0292; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 52 - 246
Target Start/End: Original strand, 478 - 674
Alignment:
Q |
52 |
cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat |
150 |
Q |
|
|
|||||||||||||| | ||||||||| |||||||||||||||| ||||| |||||| |||||||| | |||||| ||||| || | | |||||| ||| |
|
|
T |
478 |
cttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcatatattataattaacatcctcattaagtctcaat |
577 |
T |
 |
Q |
151 |
tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||| | |||||||||||| || | || ||| |||||||| |||||| || |||||| |||||||||||| ||||||||||||||||||||||| |
|
|
T |
578 |
actaccccaaggttcaactctcaacaactcatgcaacaaaggttgcaaaaacctaacaagacactctgtttctgggtcactcgcgaggcgagagcct |
674 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0042 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0042
Description:
Target: scaffold0042; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 8 - 246
Target Start/End: Complemental strand, 24329 - 24091
Alignment:
Q |
8 |
atatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataat-caacaacaacatatctt |
105 |
Q |
|
|
||||||| | |||||||||||||||||| || || |||| ||||||||||||||||| | ||||||||| ||||||||||| ||||| ||||| ||||| |
|
|
T |
24329 |
atatcaattgcaattcatcaacatcttaaat--attcaaatattcttcaagtaatgcacataacattatatcacatcataattcaacatcaacacatctt |
24232 |
T |
 |
Q |
106 |
attcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaa |
205 |
Q |
|
|
| ||||||||||||||||| ||||| || | |||||||||| ||| || | |||||||||||||| | |||||| ||||||||||||||||| || |
|
|
T |
24231 |
aaacagcttcacagattataattaacatcctcaataagtcttaatactatcccaaagttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaa |
24132 |
T |
 |
Q |
206 |
caagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||| |||| ||||||| ||||||||||||||||||||||| |
|
|
T |
24131 |
caaggcactttgtttctaggtcactcgcgaggcgagagcct |
24091 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0647 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0647
Description:
Target: scaffold0647; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 8 - 246
Target Start/End: Complemental strand, 6148 - 5911
Alignment:
Q |
8 |
atatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatctta |
106 |
Q |
|
|
||||||| | |||||||||||||||||| || || |||| ||||||||||||||||| | ||||||||| |||||||||||||||| ||||| |||||| |
|
|
T |
6148 |
atatcaattgcaattcatcaacatcttaaat--attcaaatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatctta |
6051 |
T |
 |
Q |
107 |
ttcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaac |
206 |
Q |
|
|
|||||||||| ||||| ||||| |||| | |||||||||| ||| || | ||||| |||||||| | |||||| ||||||||||||||||| ||| |
|
|
T |
6050 |
aacagcttcacattttataattaacatcatcattaagtcttaatgctatcccaaggttccactctcgataactcgtgcaacaaaggtcgcaaaatctaac |
5951 |
T |
 |
Q |
207 |
aagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||| |||||||||||| ||||||| |||||||||||||| |
|
|
T |
5950 |
aaggcactctgtttctgggtcactaacgaggcgagagcct |
5911 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0016
Description:
Target: scaffold0016; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 1938 - 2182
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||| | |||||||||||||||||| || || |||| ||||||||||||||||| | ||||||||| |||||||||||||||| ||||| |
|
|
T |
1938 |
cataataatatcaattgcaattcatcaacatcttaaat--attcaaatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaaca |
2035 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| |||||||||||||||| ||||| || | | |||||||||| ||| || | ||||||||||||||| | |||||| ||||||||| |||| |
|
|
T |
2036 |
catcttaaatagcttcacagattataattaacatcctcattaagtcttaatactatcccaaggttcaactctcgacaactcgtgcaacaaaggtcacaaa |
2135 |
T |
 |
Q |
200 |
atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||| |||||| |||||||||| ||||||||| ||||||| ||||| |
|
|
T |
2136 |
atctaacaaggcactctgttttagggtcactcgtgaggcgatagcct |
2182 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0088 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0088
Description:
Target: scaffold0088; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 20998 - 21242
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaa-cattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||| | ||||||| |||||||||| || || |||| |||| ||||||||||||||| ||||||| ||||||||||||| || ||||| |
|
|
T |
20998 |
cataataatatcaattgcaattcaacaacatcttatat--attcaaatgttctacaagtaatgcataaaacattatatcacatcataatcagcatcaaca |
21095 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| ||||||||||| ||||| ||||| || | | |||||||||| |||||||| ||||||||||| | | |||||| |||||||||||||| |
|
|
T |
21096 |
catcttaaacagcttcacaggttataattaacatcttcattaagtcttaatactacccaaaggttcaactctgatcaactcgtgcaacaaaggtcgcaaa |
21195 |
T |
 |
Q |
200 |
atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
| |||||||||||||||||| | |||||||| |||||||||||||| |
|
|
T |
21196 |
actcaacaagtcactctgtttttgggtcactcacgaggcgagagcct |
21242 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0231 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0231
Description:
Target: scaffold0231; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 22969 - 23214
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||||| ||| ||| |||||||||| || || ||| || |||||||||||||| | ||||||||| |||||| ||||||||| ||||| |
|
|
T |
22969 |
cataataatatcaaatgcaagtcaacaacatcttaaat--attcaattatacttcaagtaatgcacataacattatatcacatcgtaatcaacatcaaca |
23066 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| ||||||||||||||||| |||| |||| | |||||| ||| |||||| | |||||||||||| || | |||||| |||||||||||||| |
|
|
T |
23067 |
catcttaaacagcttcacagattataaataacatcatcattaagtctcaatactaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaa |
23166 |
T |
 |
Q |
200 |
atcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
| || |||||| |||||||||||| |||||||||||||||||| |||| |
|
|
T |
23167 |
aacctaacaagacactctgtttctaggtcactcgcgaggcgagggcct |
23214 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0403 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0403
Description:
Target: scaffold0403; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 4936 - 5179
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaa-cattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||||| ||||||| |||||||||| |||| |||| | | |||||||||||||||| ||||||| |||||||||||||||||||||| |
|
|
T |
4936 |
cataataatatcaaatgcaattcaacaacatcttaa--gtattcaaataattctcaagtaatgcataaaacattatatcacatcataatcaacaacaaca |
5033 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| |||||||||||||||||| ||||| | | | |||||||| | ||| |||| |||| || ||| || | |||||| |||||||| ||||| |
|
|
T |
5034 |
catcttaaacagcttcacagattatagctaaccccttcattaagtcttattgctagccaaaggtttaatcctcaacaactcgtgcaacaaaggtggcaaa |
5133 |
T |
 |
Q |
200 |
atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
| | ||||||||||||||||||| ||||||||||||||| ||||||| |
|
|
T |
5134 |
a-ctaacaagtcactctgtttctaggtcactcgcgaggcaagagcct |
5179 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0235 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0235
Description:
Target: scaffold0235; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 108 - 246
Target Start/End: Complemental strand, 11441 - 11303
Alignment:
Q |
108 |
tcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaaca |
207 |
Q |
|
|
|||||||||||||||||| |||||||||| | ||||||||||||||||||| |||||||||||| || | |||||| ||||||||||||||||| |||| |
|
|
T |
11441 |
tcagcttcacagattataattaacctcatcattaagtcttaattctacccaaaggttcaactctctacaactcgtgcaacaaaggtcgcaaaatctaaca |
11342 |
T |
 |
Q |
208 |
agtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||||||| ||||||| ||||||||||||| |||||||| |
|
|
T |
11341 |
agtcactttgtttctgtgtcactcgcgaggtgagagcct |
11303 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 68 - 246
Target Start/End: Complemental strand, 339918 - 339740
Alignment:
Q |
68 |
aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaa |
167 |
Q |
|
|
||||||||| |||||||||||||||| ||||| |||||| ||||||||||||||||| ||||| |||| | |||||| ||| |||||| | ||||||| |
|
|
T |
339918 |
aacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacgtcatcattaagtctcaatactaccccaaggttcaa |
339819 |
T |
 |
Q |
168 |
ctctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
| || |||| |||||| ||||||||||||||| | |||||| |||||| ||||| ||||||||||||||||||||||| |
|
|
T |
339818 |
cccttaacgactcgtgcaacaaaggtcgcaaaacctaacaaggcactctatttctgggtcactcgcgaggcgagagcct |
339740 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0484 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0484
Description:
Target: scaffold0484; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 54 - 246
Target Start/End: Original strand, 1052 - 1245
Alignment:
Q |
54 |
tcaagtaatgcataaa-cattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattc |
152 |
Q |
|
|
|||||||||||||||| ||||||| |||||||||||||||||||||| |||||| || |||||||||||||| ||| |||| | | |||||||||| | |
|
|
T |
1052 |
tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacatcttcacagattataattagcctcttcattaagtcttaatac |
1151 |
T |
 |
Q |
153 |
tacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||||||| ||||||||||| || | |||||| |||||||||||||| || ||||| |||| |||||| ||||||||| ||||||||||||| |
|
|
T |
1152 |
tacccaaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaagtctcacaaggcactttgtttccgggtcactcgtgaggcgagagcct |
1245 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0165 (Bit Score: 77; Significance: 7e-36; HSPs: 2)
Name: scaffold0165
Description:
Target: scaffold0165; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 78 - 246
Target Start/End: Original strand, 3644 - 3812
Alignment:
Q |
78 |
cacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacga |
177 |
Q |
|
|
|||||||||||||||||||||| |||||| ||||||||||||||||| ||| |||| | | |||||||||| |||||||| |||||||||||| || | |
|
|
T |
3644 |
cacatcataatcaacaacaacacatcttaaacagcttcacagattataattagcctcttcattaagtcttaatactacccaaaggttcaactctcaacaa |
3743 |
T |
 |
Q |
178 |
atcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||| ||||||||| |||| || ||||| ||||||||||| ||||||||||||| ||||||||| |
|
|
T |
3744 |
ctcgtgcaacaaaggtcacaaagtctcacaaggcactctgtttccgggtcactcgcgagacgagagcct |
3812 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0165; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 78 - 246
Target Start/End: Original strand, 7708 - 7876
Alignment:
Q |
78 |
cacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacga |
177 |
Q |
|
|
|||||||||||||||||||||| |||||| ||||||||||||||||| ||| |||| | | |||||||||| |||||||| |||||||||||| || | |
|
|
T |
7708 |
cacatcataatcaacaacaacacatcttaaacagcttcacagattataattagcctcttcattaagtcttaatactacccaaaggttcaactctcaacaa |
7807 |
T |
 |
Q |
178 |
atcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||| ||||||||| |||| || ||||| ||||||||||| ||||||||||||| ||||||||| |
|
|
T |
7808 |
ctcgtgcaacaaaggtcacaaagtctcacaaggcactctgtttccgggtcactcgcgagacgagagcct |
7876 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0141 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0141
Description:
Target: scaffold0141; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 39563 - 39808
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||||| ||| ||| |||||||| | || ||||| ||| ||||||||||||| | ||||||||| |||||||||||||||| ||||| |
|
|
T |
39563 |
cataataatatcaaatgcaagtcaacaacatctcaaat--atacattcataattcaagtaatgcacataacattatatcacatcataatcaacatcaaca |
39660 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| |||||||| |||||||| ||||| ||||| | |||||| ||| |||||| | |||||||| || || | | |||||||| || ||||||| |
|
|
T |
39661 |
catcttaaacagcttcatagattataattaacatcattattaagtctcaatactaccccaaggttcaacccttaacaacttgtgcgacacagatcgcaaa |
39760 |
T |
 |
Q |
200 |
atcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||| ||||| |||||||||||| ||||||||||||||||||||||| |
|
|
T |
39761 |
atcctgacaaggcactctgtttctgggtcactcgcgaggcgagagcct |
39808 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0080 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0080
Description:
Target: scaffold0080; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 52 - 246
Target Start/End: Original strand, 40048 - 40244
Alignment:
Q |
52 |
cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat |
150 |
Q |
|
|
|||||||||||||| | ||||||||| |||||||||||||||| ||||| ||| || |||||||||||||||| ||||| |||| | |||||| ||| |
|
|
T |
40048 |
cttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcataaagagcttcacagattataattaacatcatcattaagtctcaat |
40147 |
T |
 |
Q |
151 |
tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa-atccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||| | |||||||||||| || | |||||| |||||||||||||| | | |||||| ||||||||||| ||||||||||||||||||||||| |
|
|
T |
40148 |
actaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaacacctaacaaggtactctgtttctgggtcactcgcgaggcgagagcct |
40244 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0049 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0049
Description:
Target: scaffold0049; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 75249 - 75004
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||||| ||| ||| |||||||| | || ||||| ||| ||||||||||||| | ||||||||| |||||||||||||||| ||||| |
|
|
T |
75249 |
cataataatatcaaatgcaagtcaacaacatctcaaat--atacattcataattcaagtaatgcacataacattatatcacatcataatcaacatcaaca |
75152 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| |||||||| |||||||| ||||| ||||| | |||||| ||| |||||| | |||||||| || || | | |||||||| || ||||||| |
|
|
T |
75151 |
catcttaaacagcttcatagattataattaacatcattattaagtctcaatactaccccaaggttcaacccttaacaacttgtgcgacacagatcgcaaa |
75052 |
T |
 |
Q |
200 |
atcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||| ||||| |||||||||||| ||||||||||||||||||||||| |
|
|
T |
75051 |
atcctgacaaggcactctgtttctgggtcactcgcgaggcgagagcct |
75004 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0122 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0122
Description:
Target: scaffold0122; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 68 - 246
Target Start/End: Complemental strand, 26033 - 25854
Alignment:
Q |
68 |
aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaa |
167 |
Q |
|
|
||||||||| |||||||||||||||| ||||| |||||| |||||||| |||||||| ||||| |||| | |||||| ||| |||||| | |||||| |
|
|
T |
26033 |
aacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagattataattaacatcatcattaagtctcaatactaccccaaggttcag |
25934 |
T |
 |
Q |
168 |
ctctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||| | | |||||| |||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| |
|
|
T |
25933 |
ctcttagcaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcct |
25854 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0122; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 68 - 246
Target Start/End: Complemental strand, 33463 - 33284
Alignment:
Q |
68 |
aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaa |
167 |
Q |
|
|
||||||||| |||||||||||||||| |||| |||||| |||||||| || ||||| ||||| |||| | |||||| ||| |||||| | ||||||| |
|
|
T |
33463 |
aacattatatcacatcataatcaacatcaacgcatcttaaacagcttcataggttataattaacatcatcattaagtctcaatactaccccaaggttcaa |
33364 |
T |
 |
Q |
168 |
ctctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||| || | | || |||| || ||||||||||| ||||| |||||||||||| |||||| |||||||||||||||| |
|
|
T |
33363 |
ctcttaacaacttgtatgacacagatcgcaaaatcctgacaaggcactctgtttctgggtcacacgcgaggcgagagcct |
33284 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0034 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0034
Description:
Target: scaffold0034; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 52 - 246
Target Start/End: Complemental strand, 51868 - 51674
Alignment:
Q |
52 |
cttcaagtaatgcataaacattataacacatcataa-tcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat |
150 |
Q |
|
|
||||||||||||| || |||||||| |||||||||| |||||| || || || || |||||||||| ||| || |||| |||| |||||||||||| |
|
|
T |
51868 |
cttcaagtaatgcgtatacattatatcacatcataaatcaacattaatatctcataa-cagcttcacaaattgtaattaatatcatattcaagtcttaat |
51770 |
T |
 |
Q |
151 |
tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||| | ||||||||||||||| | |||||| ||||||||||||||||| ||||||||||||||||||| ||||||| |||||| |||||||| |
|
|
T |
51769 |
gctaccccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcactagcgaggtgagagcct |
51674 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0305 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0305
Description:
Target: scaffold0305; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 109 - 246
Target Start/End: Original strand, 20597 - 20734
Alignment:
Q |
109 |
cagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaa |
208 |
Q |
|
|
||||||||||||||||||||||| |||| | |||||||||| ||| | | ||||||||||||||| | |||||| ||||||||||||||||| ||||| |
|
|
T |
20597 |
cagcttcacagattatagttaacatcatcattaagtcttaatgctattccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaa |
20696 |
T |
 |
Q |
209 |
gtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
| |||||||||||| |||| |||||||||||||||||| |
|
|
T |
20697 |
ggcactctgtttctaggtcgctcgcgaggcgagagcct |
20734 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0130 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0130
Description:
Target: scaffold0130; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 27917 - 28162
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||||| ||| ||| |||||||| | || ||||| ||| ||||||||||||||| ||||||||| |||||||||||||||| ||||| |
|
|
T |
27917 |
cataataatatcaaatgcaagtcaacaacatctcaaat--atacattcataattcaagtaatgcatataacattatatcacatcataatcaacatcaaca |
28014 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| || |||||||| ||||| ||||| |||| | |||||| ||| |||||| | ||||||||||| || | | |||||||| || | ||||| |
|
|
T |
28015 |
aatcttaaacaacttcacaggttataattaacatcatcattaagtctcaatactaccccaaggttcaactcttaacaacttgtgcgacacagattgcaaa |
28114 |
T |
 |
Q |
200 |
atcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||| ||||| |||||||||||| ||||||||||||||||||||||| |
|
|
T |
28115 |
atcctgacaaggcactctgtttctgggtcactcgcgaggcgagagcct |
28162 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0056 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0056
Description:
Target: scaffold0056; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 17249 - 17004
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||||| ||| ||| |||||||| | ||||||| ||| |||||||||||| | ||||||||| |||||||||||||||| ||||| |
|
|
T |
17249 |
cataataatatcaaatgcaagtcaacaacatctcaa--gtatacattcataattcaagtaatgcgtttaacattatatcacatcataatcaacatcaaca |
17152 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
||||| |||||| |||||||||| ||||| |||| | |||||| ||| |||||| | |||| ||||||| || | |||||| |||||||||||||| |
|
|
T |
17151 |
cgtcttaaacagctttacagattataattaacatcatgattaagtctcaatactaccccaaggtttaactctcaacaactcgtgcaacaaaggtcgcaaa |
17052 |
T |
 |
Q |
200 |
atcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||| || ||| ||||||||||| ||||||||||||||||||||||| |
|
|
T |
17051 |
atcctaataaggtactctgtttctgggtcactcgcgaggcgagagcct |
17004 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0026
Description:
Target: scaffold0026; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 52 - 246
Target Start/End: Original strand, 39993 - 40188
Alignment:
Q |
52 |
cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat |
150 |
Q |
|
|
||||||||||||||| ||||||||| |||||||||||||||| |||| |||||| |||||||||| |||||| ||||| || | | |||||| ||| |
|
|
T |
39993 |
cttcaagtaatgcatttaacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaaattataattaacatcctcattaagtctcaat |
40092 |
T |
 |
Q |
151 |
tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatc-caacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||||| |||||||||||| || ||| |||| ||||||||||||||||| |||||| ||||| |||||| |||||| |||||||||||||||| |
|
|
T |
40093 |
gctacccaa-ggttcaactctcaacaaattgtgcaacaaaggtcgcaaaatcataacaaggcactcggtttctaggtcacccgcgaggcgagagcct |
40188 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 52 - 232
Target Start/End: Original strand, 26031 - 26213
Alignment:
Q |
52 |
cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat |
150 |
Q |
|
|
||||||||||||||| ||||||||| |||||||||||||||| |||| |||||| ||||||||||||||||| ||||| || | | |||||| ||| |
|
|
T |
26031 |
cttcaagtaatgcatttaacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacagattataattaacatcctcattaagtctcaat |
26130 |
T |
 |
Q |
151 |
tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcg |
232 |
Q |
|
|
|||||| | |||||||||||| || |||||||| |||||||||||||||||| |||||| |||| |||||| ||||||||| |
|
|
T |
26131 |
gctaccccaaggttcaactctcaacaaatcgtgcaacaaaggtcgcaaaatcctaacaaggcacttggtttctgggtcactcg |
26213 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0639 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0639
Description:
Target: scaffold0639; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 79 - 246
Target Start/End: Original strand, 8639 - 8806
Alignment:
Q |
79 |
acatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaa |
178 |
Q |
|
|
||||||||||||||| ||||| ||| || |||||||||||||| || ||||| |||| | |||||||||| |||| | | |||||||||||| || | |
|
|
T |
8639 |
acatcataatcaacatcaacacatcctaaacagcttcacagattgtaattaacatcatcattaagtcttaatactactccaaggttcaactctcaacaac |
8738 |
T |
 |
Q |
179 |
tcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||| ||||||||||||||| | |||||| |||||||||||| ||||| ||||||||||||||||| |
|
|
T |
8739 |
tcgtgcaacaaaggtcgcaaaacctaacaagacactctgtttctgggtcattcgcgaggcgagagcct |
8806 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0175 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0175
Description:
Target: scaffold0175; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 52 - 246
Target Start/End: Original strand, 13228 - 13423
Alignment:
Q |
52 |
cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat |
150 |
Q |
|
|
|||||||||||||| | ||||||||| |||| ||||||||||| ||||| |||||| ||| ||||||||||||| ||||| || | | ||||| ||| |
|
|
T |
13228 |
cttcaagtaatgcacataacattatatcacaacataatcaacatcaacacatcttaaacagtttcacagattataattaacatcttcattaagtcccaat |
13327 |
T |
 |
Q |
151 |
tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||| | ||||||||||| || | |||||| ||||||||||||||| | |||||| ||||| |||||| ||||||||||||||||||||||| |
|
|
T |
13328 |
actaccccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaacctaacaagacactcagtttctgggtcactcgcgaggcgagagcct |
13423 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0121 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0121
Description:
Target: scaffold0121; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 52 - 246
Target Start/End: Complemental strand, 8518 - 8322
Alignment:
Q |
52 |
cttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat |
150 |
Q |
|
|
|||||||||||||| | ||||||||| |||| ||||||||||| ||||| |||||| ||||||||||||||||| ||||| || | | ||||| ||| |
|
|
T |
8518 |
cttcaagtaatgcacataacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattataattaacatcctcattaagtcccaat |
8419 |
T |
 |
Q |
151 |
tctaccca-agggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||| | ||||||||||| || | |||||| || |||||||||||| | |||||| |||||||||||| ||||||||||||||||||||||| |
|
|
T |
8418 |
actacccccaacgttcaactctcaacaactcgtgcaacgaaggtcgcaaaacctaacaagacactctgtttctgggtcactcgcgaggcgagagcct |
8322 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0217 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0217
Description:
Target: scaffold0217; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 53 - 246
Target Start/End: Complemental strand, 16584 - 16389
Alignment:
Q |
53 |
ttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaatt |
151 |
Q |
|
|
|||||||||||| || ||||||||| ||||||| |||||||| ||||| |||||| |||||||||||| |||| ||||| |||| | |||||| ||| |
|
|
T |
16584 |
ttcaagtaatgcgtataacattatatcacatcaaaatcaacatcaacacatcttaaacagcttcacagactataattaacatcatcattaagtctcaata |
16485 |
T |
 |
Q |
152 |
ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaat-ccaacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||| | |||||||||| || | | |||||||| || ||||||||| |||||||| |||||||||| | ||||||||||||||||||||||| |
|
|
T |
16484 |
ctaccccaaggttcaactcctaacaacttgtgcgacacagatcgcaaaatcccaacaaggcactctgtttttgggtcactcgcgaggcgagagcct |
16389 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0215 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0215
Description:
Target: scaffold0215; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 26911 - 27036
Alignment:
Q |
2 |
ataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacata |
101 |
Q |
|
|
||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||| |
|
|
T |
26911 |
ataattatatcaa-ttcaattcatcaacatctta--tgtatacaaatattcttcaagtaatgcataaacattataatacatcataatcaacacaaacatc |
27007 |
T |
 |
Q |
102 |
tcttattcagcttcacagattatagttaac |
131 |
Q |
|
|
|| || |||||||||||||| ||||||| |
|
|
T |
27008 |
tcata-acagcttcacagattgcagttaac |
27036 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0228 (Bit Score: 65; Significance: 1e-28; HSPs: 3)
Name: scaffold0228
Description:
Target: scaffold0228; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 4594 - 4839
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||||| ||| ||| |||||||| | || ||||| ||| |||||||||||| || ||||||||| |||||||||||||||| ||||| |
|
|
T |
4594 |
cataataatatcaaatgcaagtcaacaacatctcaaat--atacattcataattcaagtaatgcgtataacattatatcacatcataatcaacatcaaca |
4691 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| ||||||||||||||||| ||||| |||| | |||||| ||| |||||| | ||||||||||| || | | |||||||| | ||||||| |
|
|
T |
4692 |
catcttaaacagcttcacagattataattaacatcatcattaagtctcaatactaccccaaggttcaactcttaacaacttgtgcgacactgatcgcaaa |
4791 |
T |
 |
Q |
200 |
atcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||| ||| || || |||||||| |||||||||||| |||||||||| |
|
|
T |
4792 |
atcctaactaggtaccctgtttctgggtcactcgcgaagcgagagcct |
4839 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0228; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 12176 - 12421
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||||| ||| ||| |||||||| | || ||||| ||| |||||||||||| || ||||||||| |||||||||||||||| ||||| |
|
|
T |
12176 |
cataataatatcaaatgcaagtcaacaacatctcaaat--atacattcataattcaagtaatgcgtataacattatatcacatcataatcaacatcaaca |
12273 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| ||||||||||||||||| ||||| |||| | |||||| ||| |||||| | ||||||||||| || | | |||||||| | ||||||| |
|
|
T |
12274 |
catcttaaacagcttcacagattataattaacatcatcattaagtctcaatactaccccaaggttcaactcttaacaacttgtgcgacactgatcgcaaa |
12373 |
T |
 |
Q |
200 |
atcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||| ||| || || |||||||| |||||||||||| |||||||||| |
|
|
T |
12374 |
atcctaactaggtaccctgtttctgggtcactcgcgaagcgagagcct |
12421 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0228; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 22128 - 22373
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||||| ||| ||| |||||||| | || ||||| ||| |||||||||||| || ||||||||| |||||||||||||||| ||||| |
|
|
T |
22128 |
cataataatatcaaatgcaagtcaacaacatctcaaat--atacattcataattcaagtaatgcgtataacattatatcacatcataatcaacatcaaca |
22225 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| ||||||||||||||||| ||||| |||| | |||||| ||| |||||| | ||||||||||| || | | |||||||| | ||||||| |
|
|
T |
22226 |
catcttaaacagcttcacagattataattaacatcatcattaagtctcaatactaccccaaggttcaactcttaacaacttgtgcgacactgatcgcaaa |
22325 |
T |
 |
Q |
200 |
atcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||| ||| || || |||||||| |||||||||||| |||||||||| |
|
|
T |
22326 |
atcctaactaggtaccctgtttctgggtcactcgcgaagcgagagcct |
22373 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0084 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0084
Description:
Target: scaffold0084; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 78 - 239
Target Start/End: Original strand, 10326 - 10488
Alignment:
Q |
78 |
cacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacga |
177 |
Q |
|
|
|||||||||||||||| ||||| |||||| |||||||||||||||| ||||| ||||| | |||||| ||| |||||| | ||||||||||| || | |
|
|
T |
10326 |
cacatcataatcaacatcaacacatcttaaacagcttcacagattattattaacatcattattaagtctcaatactaccccaaggttcaactcttaacaa |
10425 |
T |
 |
Q |
178 |
atcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcg |
239 |
Q |
|
|
| |||||||| || ||||||||||| |||||| |||| ||||||| |||||||||||||||| |
|
|
T |
10426 |
cttgtgcgacacagatcgcaaaatcctaacaaggcactttgtttctaggtcactcgcgaggcg |
10488 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0540 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0540
Description:
Target: scaffold0540; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 3185 - 2987
Alignment:
Q |
1 |
cataattatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcata-aacattataacacatcataatcaacaacaaca |
99 |
Q |
|
|
|||||| ||||||||| ||| ||| |||||||| | || ||||| ||| ||||||||||||||| ||||||||| |||||||||||||||| |||| |
|
|
T |
3185 |
cataataatatcaaatgcaagtcaacaacatctcaaat--atacattcataattcaagtaatgcatataacattatatcacatcataatcaacatcaacg |
3088 |
T |
 |
Q |
100 |
tatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaa |
199 |
Q |
|
|
|||||| ||||||||||| ||||| ||||| |||| | |||||| ||| |||||| | |||||||||||| || | |||||| ||| |||||||||| |
|
|
T |
3087 |
catcttaaacagcttcacaggttataattaacatcatcattaagtctcaatactaccccaaggttcaactctcaacaactcgtgcaacacaggtcgcaaa |
2988 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0540; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 246
Target Start/End: Complemental strand, 837 - 802
Alignment:
Q |
211 |
cactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||||||||| ||||||||||||||||||||||| |
|
|
T |
837 |
cactctgtttctgggtcactcgcgaggcgagagcct |
802 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0352 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0352
Description:
Target: scaffold0352; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 95 - 233
Target Start/End: Complemental strand, 17928 - 17790
Alignment:
Q |
95 |
caacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtc |
194 |
Q |
|
|
||||| |||||| ||||||||||||||||| ||||| || | | |||||||||| |||||||| ||||||| |||| || | |||||| ||||||||| |
|
|
T |
17928 |
caacacatcttaaacagcttcacagattataattaacatcctcattaagtcttaatactacccaaaggttcaattctcaacaactcgtgcaacaaaggtc |
17829 |
T |
 |
Q |
195 |
gcaaaatccaacaagtcactctgtttctcggtcactcgc |
233 |
Q |
|
|
|||||| | ||||||||||||| ||||| ||| |||||| |
|
|
T |
17828 |
gcaaaacctaacaagtcactctatttctgggtgactcgc |
17790 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0029
Description:
Target: scaffold0029; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 12857 - 12971
Alignment:
Q |
14 |
aattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagct |
113 |
Q |
|
|
|||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||| |||||||||||||| |||||| || |||| |||| |
|
|
T |
12857 |
aattcaattcatcaacatctta--tgtatacaattaatcttcaagtaatgcataaacattataatacatcataatcaactccaacatctcatatt-agct |
12953 |
T |
 |
Q |
114 |
tcacagattatagttaac |
131 |
Q |
|
|
||||| ||| ||||||| |
|
|
T |
12954 |
tcacaaattgcagttaac |
12971 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1124 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold1124
Description:
Target: scaffold1124; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 1975 - 2089
Alignment:
Q |
14 |
aattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagct |
113 |
Q |
|
|
|||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||| |||| ||||| || || |||||| |
|
|
T |
1975 |
aattcaattcatcaacatctta--tgtatacaattattcttcaagtaatgcataaacattataatacatcatatccaacgcaaacatctcata-tcagct |
2071 |
T |
 |
Q |
114 |
tcacagattatagttaac |
131 |
Q |
|
|
||||||||| ||||||| |
|
|
T |
2072 |
tcacagattgcagttaac |
2089 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0210 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0210
Description:
Target: scaffold0210; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 21826 - 21712
Alignment:
Q |
14 |
aattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagct |
113 |
Q |
|
|
|||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||| ||||| ||||||||| ||||| || || ||||| |
|
|
T |
21826 |
aattcaattcatcaacatctta--tgtatacaattaatcttcaagtaatgcataaacattataatacatcttaatcaacacaaacatctcata-acagct |
21730 |
T |
 |
Q |
114 |
tcacagattatagttaac |
131 |
Q |
|
|
||||||||| ||||||| |
|
|
T |
21729 |
tcacagattgcagttaac |
21712 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0210; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 29718 - 29604
Alignment:
Q |
14 |
aattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagct |
113 |
Q |
|
|
|||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||| ||||| ||||||||| ||||| || || ||||| |
|
|
T |
29718 |
aattcaattcatcaacatctta--tgtatacaattaatcttcaagtaatgcataaacattataatacatcttaatcaacacaaacatctcata-acagct |
29622 |
T |
 |
Q |
114 |
tcacagattatagttaac |
131 |
Q |
|
|
||||||||| ||||||| |
|
|
T |
29621 |
tcacagattgcagttaac |
29604 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0395 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0395
Description:
Target: scaffold0395; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 239
Target Start/End: Complemental strand, 947 - 759
Alignment:
Q |
53 |
ttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaatt |
151 |
Q |
|
|
||||||||||||| | ||||||||| |||||| ||||| ||| ||||| |||||| |||||||||| || ||| || | ||| | |||||| ||| |
|
|
T |
947 |
ttcaagtaatgcacataacattatatcacatcgtaatcgacatcaacacatcttaaacagcttcacatatcataaatagcatcaccattaagtctcaata |
848 |
T |
 |
Q |
152 |
ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcg |
239 |
Q |
|
|
||||| | |||||||||||| || |||||| |||||||||| ||||||| |||||| | |||||||||| |||||||| ||||||| |
|
|
T |
847 |
ctacctcaaggttcaactctcaacagctcgtgcaacaaaggtcgaaaaatcctaacaagactctctgtttctaggtcactcacgaggcg |
759 |
T |
 |
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Target: scaffold0070 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0070
Description:
Target: scaffold0070; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 246
Target Start/End: Original strand, 4660 - 4855
Alignment:
Q |
52 |
cttcaagtaatgcataa-acattataacacatcataatcaacaacaacatatcttattcagcttcacagattatagttaacctcattctcaagtcttaat |
150 |
Q |
|
|
||||||||||||||||| |||||||| |||||||| ||||||| |||||| | | | |||| ||||| |||||| ||||| || | |||||| ||| |
|
|
T |
4660 |
cttcaagtaatgcataatacattatatcacatcatgatcaacatcaacatct-taaaacagcctcacaaattataattaacatcttcaataagtctcaat |
4758 |
T |
 |
Q |
151 |
tctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||||| | ||||||||||| || | |||||| |||||||||||||||||| |||| | || ||||||||| ||| || ||||||||||||||| |
|
|
T |
4759 |
actacctcaaggttcaactcttaacaactcgtgcaacaaaggtcgcaaaatcctaacatggcattctgtttctgggtagcttgcgaggcgagagcct |
4855 |
T |
 |
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Target: scaffold0627 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0627
Description:
Target: scaffold0627; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 246
Target Start/End: Original strand, 170 - 236
Alignment:
Q |
181 |
gtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||||| || ||||||||||| |||||| |||||||||||| ||||||||||| ||||||||||| |
|
|
T |
170 |
gtgcgacacagatcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgtggcgagagcct |
236 |
T |
 |
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Target: scaffold0839 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0839
Description:
Target: scaffold0839; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 1947 - 1866
Alignment:
Q |
166 |
aactctcgacgaatcgtgcgacaaaggtcgcaaaatcc--aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
||||||| |||| ||||||||||||| ||||||||||| |||||| || ||||| || ||||||||||||||||||||||| |
|
|
T |
1947 |
aactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattctgtaactgggtcactcgcgaggcgagagcct |
1866 |
T |
 |
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Target: scaffold0120 (Bit Score: 35; Significance: 0.00000000009; HSPs: 3)
Name: scaffold0120
Description:
Target: scaffold0120; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 246
Target Start/End: Original strand, 16333 - 16419
Alignment:
Q |
161 |
ggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||||||||| || | |||||| ||||||||||||||| || |||||| | |||||||||| ||||||| |||||| ||| |||| |
|
|
T |
16333 |
ggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaacaagactctctgtttctgggtcacttgcgaggtgagggcct |
16419 |
T |
 |
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Target: scaffold0120; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 246
Target Start/End: Complemental strand, 32843 - 32748
Alignment:
Q |
152 |
ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||| | ||||||||||| || | | |||||||| || ||||||||||| |||||| || ||||||| | |||||||||||||||| |||||| |
|
|
T |
32843 |
ctaccccaaggttcaactcttaacaattggtgcgacacagatcgcaaaatcctaacaagacattctgtttatgggtcactcgcgaggcgggagcct |
32748 |
T |
 |
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Target: scaffold0120; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 246
Target Start/End: Original strand, 46162 - 46257
Alignment:
Q |
152 |
ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcct |
246 |
Q |
|
|
|||||| | ||||||||||| || | | |||||||| || ||||||||||| |||||| || ||||||| | |||||||||||||||| |||||| |
|
|
T |
46162 |
ctaccccaaggttcaactcttaacaattggtgcgacacagatcgcaaaatcctaacaagacattctgtttatgggtcactcgcgaggcgggagcct |
46257 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0327 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0327
Description:
Target: scaffold0327; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 3514 - 3429
Alignment:
Q |
53 |
ttcaagtaatgcata-aacattataacacatcataatcaacaacaacatatctt-attcagcttcacagattatagttaacctcat |
136 |
Q |
|
|
|||||||||||| || ||||||||| |||||||||||||||| ||||| ||||| | |||||||| |||||||| ||||| |||| |
|
|
T |
3514 |
ttcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaaacagcttcatagattataattaacatcat |
3429 |
T |
 |
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Target: scaffold0908 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0908
Description:
Target: scaffold0908; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 3154 - 3103
Alignment:
Q |
68 |
aacattataacacatcataatcaacaacaacatatcttattcagcttcacag |
119 |
Q |
|
|
||||||||| |||||||||||||||| ||||| |||||| ||||||||||| |
|
|
T |
3154 |
aacattatatcacatcataatcaacatcaacacatcttaaacagcttcacag |
3103 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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