View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0755_low_22 (Length: 451)

Name: NF0755_low_22
Description: NF0755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0755_low_22
NF0755_low_22
[»] chr7 (30 HSPs)
chr7 (129-451)||(37727562-37727885)
chr7 (111-374)||(14270139-14270397)
chr7 (129-374)||(17232402-17232647)
chr7 (134-377)||(45847732-45847966)
chr7 (111-288)||(6170283-6170460)
chr7 (129-374)||(8468217-8468453)
chr7 (306-426)||(15439357-15439477)
chr7 (111-447)||(30820896-30821220)
chr7 (111-447)||(36685890-36686214)
chr7 (111-334)||(9389831-9390054)
chr7 (194-447)||(15213659-15213911)
chr7 (268-447)||(11085033-11085211)
chr7 (286-447)||(11092789-11092949)
chr7 (196-322)||(18302016-18302143)
chr7 (113-334)||(12371317-12371526)
chr7 (113-222)||(11066507-11066616)
chr7 (113-215)||(59303-59405)
chr7 (113-222)||(8852069-8852178)
chr7 (113-222)||(12128068-12128177)
chr7 (113-216)||(32434499-32434602)
chr7 (286-395)||(9320421-9320529)
chr7 (111-365)||(38480125-38480368)
chr7 (111-190)||(48811939-48812017)
chr7 (243-334)||(13148276-13148367)
chr7 (113-190)||(46386998-46387075)
chr7 (258-393)||(11391871-11392006)
chr7 (138-222)||(11392030-11392113)
chr7 (243-340)||(8851963-8852060)
chr7 (243-334)||(11066625-11066716)
chr7 (285-332)||(32434396-32434443)
[»] scaffold0116 (3 HSPs)
scaffold0116 (111-374)||(43879-44142)
scaffold0116 (310-424)||(43682-43796)
scaffold0116 (310-424)||(47602-47716)
[»] chr6 (20 HSPs)
chr6 (111-374)||(25956716-25956979)
chr6 (111-340)||(27850940-27851161)
chr6 (310-424)||(25956519-25956633)
chr6 (185-377)||(31630619-31630811)
chr6 (161-365)||(19399684-19399889)
chr6 (111-447)||(20734086-20734410)
chr6 (206-447)||(34296909-34297149)
chr6 (306-446)||(27851274-27851414)
chr6 (113-334)||(18708539-18708748)
chr6 (243-384)||(18927833-18927973)
chr6 (113-334)||(23151070-23151279)
chr6 (113-227)||(17318969-17319083)
chr6 (113-199)||(27323545-27323631)
chr6 (113-196)||(31733753-31733836)
chr6 (268-394)||(2201153-2201278)
chr6 (286-384)||(22421019-22421117)
chr6 (258-334)||(27322222-27322298)
chr6 (138-222)||(28708539-28708622)
chr6 (248-365)||(28708636-28708754)
chr6 (138-200)||(31733825-31733887)
[»] chr3 (43 HSPs)
chr3 (111-393)||(49389744-49390028)
chr3 (111-374)||(18439942-18440206)
chr3 (259-451)||(1988867-1989059)
chr3 (129-340)||(20630225-20630437)
chr3 (111-322)||(14500897-14501109)
chr3 (111-447)||(31224594-31224918)
chr3 (111-334)||(1465545-1465768)
chr3 (111-440)||(15447647-15447961)
chr3 (161-374)||(49969964-49970178)
chr3 (243-447)||(11912930-11913133)
chr3 (129-374)||(12269351-12269596)
chr3 (138-322)||(45796969-45797153)
chr3 (138-322)||(23413385-23413568)
chr3 (197-322)||(12852504-12852631)
chr3 (308-446)||(12269677-12269812)
chr3 (113-334)||(40807035-40807244)
chr3 (111-365)||(31415292-31415535)
chr3 (113-222)||(30175418-30175527)
chr3 (113-217)||(22307492-22307596)
chr3 (111-196)||(23413557-23413642)
chr3 (111-185)||(45796895-45796969)
chr3 (113-201)||(17519830-17519918)
chr3 (113-201)||(17534692-17534780)
chr3 (113-225)||(41173220-41173332)
chr3 (113-222)||(17538146-17538255)
chr3 (113-210)||(17693167-17693264)
chr3 (111-190)||(13516432-13516510)
chr3 (113-190)||(40811850-40811927)
chr3 (113-200)||(5214957-5215044)
chr3 (243-334)||(22307387-22307478)
chr3 (248-365)||(5841943-5842061)
chr3 (306-384)||(6808209-6808287)
chr3 (258-340)||(40812010-40812092)
chr3 (137-190)||(17519785-17519838)
chr3 (137-190)||(17534647-17534700)
chr3 (243-340)||(30175312-30175409)
chr3 (138-222)||(5841846-5841929)
chr3 (137-200)||(15932380-15932443)
chr3 (243-334)||(17538264-17538355)
chr3 (390-447)||(12158623-12158681)
chr3 (140-185)||(5206544-5206589)
chr3 (135-190)||(52466430-52466486)
chr3 (113-200)||(14507943-14508030)
[»] chr8 (23 HSPs)
chr8 (111-377)||(38550083-38550349)
chr8 (111-340)||(20982753-20982983)
chr8 (129-377)||(27472388-27472636)
chr8 (176-434)||(18760476-18760734)
chr8 (111-390)||(39833748-39834029)
chr8 (111-451)||(21579842-21580171)
chr8 (194-374)||(1327120-1327300)
chr8 (286-451)||(29763504-29763668)
chr8 (194-447)||(42560167-42560419)
chr8 (111-306)||(6102530-6102721)
chr8 (113-334)||(39936814-39937023)
chr8 (305-432)||(3273211-3273336)
chr8 (112-183)||(13428328-13428399)
chr8 (111-173)||(1323371-1323433)
chr8 (111-447)||(41680774-41681085)
chr8 (111-190)||(29763753-29763831)
chr8 (115-200)||(24713262-24713347)
chr8 (268-374)||(32807299-32807405)
chr8 (390-447)||(23450812-23450870)
chr8 (390-447)||(24495924-24495982)
chr8 (390-447)||(34301890-34301948)
chr8 (287-334)||(19139966-19140013)
chr8 (129-185)||(21415364-21415421)
[»] chr1 (22 HSPs)
chr1 (111-374)||(28194544-28194807)
chr1 (117-340)||(43697143-43697366)
chr1 (111-339)||(46382684-46382913)
chr1 (129-374)||(43542891-43543136)
chr1 (310-424)||(43697482-43697596)
chr1 (310-426)||(28194345-28194461)
chr1 (111-240)||(41305825-41305945)
chr1 (129-334)||(35981822-35982027)
chr1 (268-447)||(12328495-12328673)
chr1 (193-334)||(20636694-20636835)
chr1 (111-384)||(51274290-51274552)
chr1 (370-447)||(51326966-51327042)
chr1 (113-340)||(48300902-48301117)
chr1 (117-190)||(20634510-20634583)
chr1 (306-394)||(8885469-8885556)
chr1 (243-334)||(41227508-41227599)
chr1 (137-190)||(41227630-41227683)
chr1 (113-210)||(20587769-20587866)
chr1 (113-210)||(20592307-20592404)
chr1 (130-190)||(11809421-11809482)
chr1 (111-148)||(20636668-20636705)
chr1 (130-190)||(23073052-23073113)
[»] scaffold0810 (2 HSPs)
scaffold0810 (111-365)||(2808-3062)
scaffold0810 (335-426)||(3065-3156)
[»] chr2 (18 HSPs)
chr2 (113-434)||(6576252-6576573)
chr2 (306-440)||(2524376-2524509)
chr2 (113-334)||(24781644-24781853)
chr2 (115-405)||(24865452-24865730)
chr2 (138-372)||(24436108-24436328)
chr2 (113-218)||(22689719-22689824)
chr2 (113-218)||(22694315-22694420)
chr2 (111-393)||(22500877-22501147)
chr2 (111-393)||(22508811-22509081)
chr2 (309-405)||(7672240-7672335)
chr2 (113-222)||(5032228-5032337)
chr2 (243-340)||(24883610-24883707)
chr2 (113-190)||(24883501-24883578)
chr2 (113-201)||(9974964-9975052)
chr2 (119-190)||(9975026-9975097)
chr2 (111-190)||(20915143-20915221)
chr2 (138-239)||(21367910-21368010)
chr2 (243-334)||(5032128-5032219)
[»] scaffold0009 (1 HSPs)
scaffold0009 (111-374)||(85011-85274)
[»] chr5 (19 HSPs)
chr5 (129-365)||(29915177-29915413)
chr5 (111-374)||(5889270-5889517)
chr5 (111-451)||(12122157-12122485)
chr5 (111-334)||(21741667-21741899)
chr5 (310-426)||(5889072-5889188)
chr5 (111-447)||(21557685-21558009)
chr5 (194-447)||(36460130-36460382)
chr5 (111-440)||(21555026-21555344)
chr5 (286-445)||(30615808-30615965)
chr5 (306-423)||(31455765-31455881)
chr5 (254-340)||(21871689-21871775)
chr5 (254-340)||(21875969-21876055)
chr5 (288-394)||(24212422-24212527)
chr5 (117-190)||(31454971-31455043)
chr5 (117-190)||(31455584-31455656)
chr5 (306-394)||(35852695-35852782)
chr5 (111-190)||(17875102-17875180)
chr5 (306-409)||(31455152-31455254)
chr5 (135-190)||(30615667-30615722)
[»] chr4 (29 HSPs)
chr4 (111-377)||(362018-362275)
chr4 (138-340)||(630892-631095)
chr4 (138-340)||(15868827-15869030)
chr4 (111-334)||(15099112-15099335)
chr4 (268-451)||(33186136-33186318)
chr4 (310-420)||(13844648-13844758)
chr4 (193-340)||(13844384-13844532)
chr4 (156-322)||(32851194-32851361)
chr4 (113-446)||(35812131-35812450)
chr4 (306-446)||(46642939-46643077)
chr4 (111-196)||(15869019-15869104)
chr4 (193-374)||(46642679-46642860)
chr4 (243-384)||(9923306-9923446)
chr4 (111-195)||(19857345-19857429)
chr4 (111-185)||(32851109-32851183)
chr4 (268-384)||(11479413-11479528)
chr4 (113-222)||(19609363-19609472)
chr4 (113-201)||(10357365-10357453)
chr4 (258-374)||(52873252-52873367)
chr4 (119-225)||(10357285-10357391)
chr4 (111-157)||(3514939-3514985)
chr4 (327-421)||(14185253-14185346)
chr4 (113-195)||(15042058-15042141)
chr4 (113-195)||(15112283-15112366)
chr4 (139-239)||(14185094-14185193)
chr4 (111-190)||(33185990-33186068)
chr4 (269-382)||(15880732-15880845)
chr4 (243-334)||(19609481-19609572)
chr4 (119-149)||(46642661-46642691)
[»] scaffold0004 (1 HSPs)
scaffold0004 (130-374)||(362787-363031)
[»] scaffold1137 (1 HSPs)
scaffold1137 (111-334)||(2426-2649)
[»] scaffold0035 (1 HSPs)
scaffold0035 (111-240)||(106328-106457)
[»] scaffold0080 (1 HSPs)
scaffold0080 (113-434)||(59259-59566)
[»] scaffold0071 (1 HSPs)
scaffold0071 (111-440)||(14228-14545)
[»] scaffold1792 (2 HSPs)
scaffold1792 (138-320)||(232-414)
scaffold1792 (111-196)||(158-243)
[»] scaffold0230 (3 HSPs)
scaffold0230 (138-320)||(23486-23668)
scaffold0230 (111-196)||(23657-23742)
scaffold0230 (111-152)||(20770-20811)
[»] scaffold0371 (1 HSPs)
scaffold0371 (138-433)||(2980-3261)
[»] scaffold0075 (2 HSPs)
scaffold0075 (138-340)||(8412-8616)
scaffold0075 (111-196)||(8605-8690)
[»] scaffold0737 (4 HSPs)
scaffold0737 (117-447)||(6318-6636)
scaffold0737 (119-200)||(5586-5667)
scaffold0737 (137-201)||(5641-5705)
scaffold0737 (137-200)||(5751-5814)
[»] scaffold0235 (4 HSPs)
scaffold0235 (138-322)||(13364-13549)
scaffold0235 (138-265)||(25065-25193)
scaffold0235 (111-185)||(13290-13364)
scaffold0235 (111-185)||(24991-25065)
[»] scaffold0599 (2 HSPs)
scaffold0599 (243-447)||(206-409)
scaffold0599 (243-411)||(4624-4791)
[»] scaffold0124 (1 HSPs)
scaffold0124 (197-322)||(24790-24916)
[»] scaffold0045 (1 HSPs)
scaffold0045 (111-222)||(46923-47033)
[»] scaffold0142 (1 HSPs)
scaffold0142 (197-322)||(7784-7911)
[»] scaffold0061 (3 HSPs)
scaffold0061 (111-206)||(19314-19409)
scaffold0061 (310-393)||(15421-15503)
scaffold0061 (310-393)||(24479-24561)
[»] scaffold0098 (1 HSPs)
scaffold0098 (111-185)||(34877-34951)
[»] scaffold0026 (1 HSPs)
scaffold0026 (111-225)||(145825-145938)
[»] scaffold0335 (1 HSPs)
scaffold0335 (243-384)||(814-954)
[»] scaffold0375 (1 HSPs)
scaffold0375 (113-334)||(9106-9315)
[»] scaffold0513 (1 HSPs)
scaffold0513 (245-340)||(10997-11092)
[»] scaffold0802 (1 HSPs)
scaffold0802 (243-384)||(5459-5599)
[»] scaffold1351 (1 HSPs)
scaffold1351 (111-405)||(1454-1736)
[»] scaffold0134 (1 HSPs)
scaffold0134 (113-334)||(10030-10239)
[»] scaffold0509 (2 HSPs)
scaffold0509 (113-211)||(9673-9771)
scaffold0509 (258-334)||(9562-9638)
[»] scaffold0100 (1 HSPs)
scaffold0100 (255-374)||(36143-36261)
[»] scaffold0434 (1 HSPs)
scaffold0434 (244-374)||(6771-6901)
[»] scaffold0001 (2 HSPs)
scaffold0001 (283-384)||(76939-77038)
scaffold0001 (117-190)||(76794-76867)
[»] scaffold0384 (1 HSPs)
scaffold0384 (147-334)||(8190-8365)
[»] scaffold0064 (1 HSPs)
scaffold0064 (113-225)||(57839-57951)
[»] scaffold0716 (1 HSPs)
scaffold0716 (111-173)||(4626-4689)
[»] scaffold0507 (1 HSPs)
scaffold0507 (113-190)||(2772-2849)
[»] scaffold0632 (1 HSPs)
scaffold0632 (117-190)||(263-335)
[»] scaffold0029 (1 HSPs)
scaffold0029 (136-185)||(74596-74645)
[»] scaffold0639 (1 HSPs)
scaffold0639 (138-195)||(7585-7642)
[»] scaffold0679 (2 HSPs)
scaffold0679 (138-222)||(2581-2664)
scaffold0679 (248-365)||(2449-2567)
[»] scaffold0395 (2 HSPs)
scaffold0395 (111-190)||(10783-10861)
scaffold0395 (286-395)||(10947-11055)
[»] scaffold0261 (1 HSPs)
scaffold0261 (255-322)||(18472-18539)
[»] scaffold0192 (1 HSPs)
scaffold0192 (143-188)||(9803-9848)
[»] scaffold0377 (1 HSPs)
scaffold0377 (390-447)||(16752-16810)
[»] scaffold0586 (1 HSPs)
scaffold0586 (129-185)||(1780-1837)
[»] scaffold0149 (1 HSPs)
scaffold0149 (400-447)||(36192-36240)
[»] scaffold0003 (1 HSPs)
scaffold0003 (384-446)||(95634-95698)


Alignment Details
Target: chr7 (Bit Score: 248; Significance: 1e-137; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 129 - 451
Target Start/End: Complemental strand, 37727885 - 37727562
Alignment:
Q  129 aacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatatt 228  Q
    |||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  37727885 aacatcttaacaacttagacatctcatatgactccaataatttggaccaacatcttataacttaaacaacttaaaccaacattagcatcttaatgatatt 37727786  T
Q  229 aatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaac 327  Q
    |||||||||||| | ||||||||||| |||||||||||| |||||||||| | | ||||||||| ||||||||||||||||||||||||||||| |||||    
T  37727785 aatacatcacatcagcaaggcaacaccatcaaataatttacagcaagtcaacatcaacaataatcatcaaatacaaccattacaacttcatatctacaac 37727686  T
Q  328 tttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatcttaatcatcctctctgaacctcattataatcattaac 427  Q
    ||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37727685 tttcacattatatagatcttttcacatttaatcatcaacgtaaagcaacaatattaaatcatcttaatcatcctctctgaacctcattataatcattaac 37727586  T
Q  428 aacttcattcctatcccaagatca 451  Q
    | ||||||||||||||||||||||    
T  37727585 atcttcattcctatcccaagatca 37727562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 111 - 374
Target Start/End: Complemental strand, 14270397 - 14270139
Alignment:
Q  111 caatggactcaacatcttaacaa----cttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaa 206  Q
    |||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||  ||||||||||         |||||||||| |    
T  14270397 caatggactcaacatcttaacaattgacttaacaacttagacatctcttatgactccaataatttggatcaacatctta---------caacttaaacca 14270307  T
Q  207 acattagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaacc 305  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||| |||||||||| | | ||||||||| ||| |||||||||    
T  14270306 acattagcatcttaatgatattaatacatcacatcagcaaggcaacaccatcaaataatttacagcaagtcaacatcaacaataatcatctaatacaacc 14270207  T
Q  306 attacaacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatca 374  Q
    |||||||||||||||||||| |||||||| |||||  || || ||||| |||||||||||  |||||||    
T  14270206 attacaacttcatatcaacatctttcacaatatataaatattctcaca-ttaatcatcaaagtaaatca 14270139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 129 - 374
Target Start/End: Original strand, 17232402 - 17232647
Alignment:
Q  129 aacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatatt 228  Q
    |||| ||||||||||||||||||||||||||||||||||||||||  ||||| |||| |||| |||||||| |||| |||||||||||||||||||||||    
T  17232402 aacatcttaacaacttagacatctcttatgactccaataatttggatcaacaccttacaacttaaacaactcaaaccaacattagcatcttaatgatatt 17232501  T
Q  229 aatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaac 327  Q
    |||||||||||| | ||||||||||| |||||||||| | |||||||||| |   ||||||||| ||| |||||||||||| |||||||||||||||| |    
T  17232502 aatacatcacatcagcaaggcaacaccatcaaataatatacagcaagtcaacagcaacaataatcatctaatacaaccattccaacttcatatcaacatc 17232601  T
Q  328 tttcacattatattgatcttttcacatttaatcatcaacataaatca 374  Q
    ||||||| |||||  || || ||||| |||||||||||  |||||||    
T  17232602 tttcacaatatataaatattctcaca-ttaatcatcaaagtaaatca 17232647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 134 - 377
Target Start/End: Complemental strand, 45847966 - 45847732
Alignment:
Q  134 cttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatattaatac 233  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||         |||||||||| ||||||||||||||||||||||||||||    
T  45847966 cttaacaacttagacatctcttatgactccaataatttggatcaacatctta---------caacttaaaccaacattagcatcttaatgatattaatac 45847876  T
Q  234 atcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttca 332  Q
    ||||||| | ||||||||||| |||||||||||| |||||||||| | | ||||||||| ||| ||||||||||||||||||||||||||||| ||||||    
T  45847875 atcacatcagcaaggcaacaccatcaaataatttacagcaagtcaacatcaacaataatcatctaatacaaccattacaacttcatatcaacatctttca 45847776  T
Q  333 cattatattgatcttttcacatttaatcatcaacataaatcaaca 377  Q
    || |||||  || || ||||| |||||||||||  ||||||||||    
T  45847775 caatatataaatattctcaca-ttaatcatcaaagtaaatcaaca 45847732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 111 - 288
Target Start/End: Complemental strand, 6170460 - 6170283
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||| ||| |||||    
T  6170460 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttggaccaacatcatataacttaaacaactt-aaccaacat 6170362  T
Q  211 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaat 288  Q
    ||||| |||||||||||||||||||||||| | ||||||||||| |||||||||||| ||| | |||||| | ||||||    
T  6170361 tagcaacttaatgatattaatacatcacatcagcaaggcaacaccatcaaataatttacagtaggtcatcatcaacaat 6170283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 129 - 374
Target Start/End: Original strand, 8468217 - 8468453
Alignment:
Q  129 aacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatatt 228  Q
    |||| |||||||||||||||||||||||||||| |||||||||||  ||||||||||         |||||||||| |||||||||||||||||||||||    
T  8468217 aacatcttaacaacttagacatctcttatgacttcaataatttggatcaacatctta---------caacttaaaccaacattagcatcttaatgatatt 8468307  T
Q  229 aatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaac 327  Q
    |||||||||||| | ||||||||||| || ||||||||| |||||||||| | | ||||||||| ||| ||||||||||||||||||||||||||||| |    
T  8468308 aatacatcacatcagcaaggcaacaccattaaataatttacagcaagtcaacatcaacaataatcatctaatacaaccattacaacttcatatcaacatc 8468407  T
Q  328 tttcacattatattgatcttttcacatttaatcatcaacataaatca 374  Q
    ||||||| |||||  || || ||||| |||||||||||  |||||||    
T  8468408 tttcacaatatataaatattatcaca-ttaatcatcaaagtaaatca 8468453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 306 - 426
Target Start/End: Original strand, 15439357 - 15439477
Alignment:
Q  306 attacaacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatcttaatcatcctctct 405  Q
    ||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  15439357 attacaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttagtcatcctctct 15439456  T
Q  406 gaacctcattataatcattaa 426  Q
    |||||||||||||||||||||    
T  15439457 gaacctcattataatcattaa 15439477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 111 - 447
Target Start/End: Complemental strand, 30821220 - 30820896
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    ||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||  |||||||||| |||| || ||||||| |||         
T  30821220 caatggactcaacatctta-cgacttaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaa-caacttagaca----- 30821128  T
Q  211 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccatta 309  Q
         |||||||| ||||||| |||||||  | |||| |||||  ||  ||  || | |||||||| | | | || |||||| |||| ||| ||| ||||    
T  30821127 -----tcttaatggtattaattcatcacaacaacaagacaacatcatttaaacatatgcagcaagttaccatcaataataatcatcatatataacaatta 30821033  T
Q  310 caacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatcttaatcatcctctctgaac 409  Q
    |||||||||||||||   ||||||| |||||  || ||||||||||||||||||||  |||| || ||||||||| |||||||| |||||||||||||||    
T  30821032 caacttcatatcaacgtatttcacaatatataaatattttcacatttaatcatcaaagtaaaacatcaatattaa-tcatcttattcatcctctctgaac 30820934  T
Q  410 ctcattataatcattaacaacttcattcctatcccaag 447  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  30820933 ctcattataatcattaacaaattcattcctaccccaag 30820896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 111 - 447
Target Start/End: Complemental strand, 36686214 - 36685890
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    ||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||  |||||||||| |||| || ||||||| |||         
T  36686214 caatggactcaacatctta-cgacttaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaa-caacttagaca----- 36686122  T
Q  211 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccatta 309  Q
         |||||||| ||||||| |||||||  | |||| |||||  ||  ||  || | |||||||||| | | || |||||| |||| ||| ||| ||||    
T  36686121 -----tcttaatggtattaattcatcacaacagcaagacaacatcatttaaacatatgcagcaagtcaccatcaataataatcatcatatataacaatta 36686027  T
Q  310 caacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatcttaatcatcctctctgaac 409  Q
     |||||||||||| |  |||||||| |||||  || ||||||||||||||||||||  |||| || ||||||||| |||||||| ||||||||| |||||    
T  36686026 aaacttcatatcagcgtctttcacaatatataaatattttcacatttaatcatcaaagtaaaacatcaatattaa-tcatcttattcatcctctgtgaac 36685928  T
Q  410 ctcattataatcattaacaacttcattcctatcccaag 447  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  36685927 ctcattataatcattaacaaattcattcctaccccaag 36685890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 111 - 334
Target Start/End: Complemental strand, 9390054 - 9389831
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||| ||| |||| |||||||||| ||  ||||    
T  9390054 caatggactcaatatcttaacagcttaacaacttagacatctcttatgactccaataatttggatcaacattttacaacttaaacaacttagacccacat 9389955  T
Q  211 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccatta 309  Q
    ||| ||||| ||||||||||||| |||||    ||||||||||| || ||||||| |  ||||||||| | | |||||||||  ||||||||||||||||    
T  9389954 tag-atcttcatgatattaatacgtcacaaccgcaaggcaacaccattaaataatatgtagcaagtcaacatcaacaataatcgtcaaatacaaccatta 9389856  T
Q  310 caacttcatatcaacaactttcaca 334  Q
    | ||||||||| | || ||||||||    
T  9389855 cgacttcatataagcatctttcaca 9389831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 194 - 447
Target Start/End: Original strand, 15213659 - 15213911
Alignment:
Q  194 acaacttaaacaaacattagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataatt 292  Q
    |||||||| || |||||||| ||||| ||||||||||||| |||||    ||||||||||| || ||||||| | |||||||||| | | || ||||||     
T  15213659 acaacttataccaacattag-atcttcatgatattaatacgtcacaaccgcaaggcaacaccattaaataatatgcagcaagtcaacatcaataataatc 15213757  T
Q  293 atcaaatacaaccattacaacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatctt 392  Q
    |||| ||| ||| ||||||| ||||||||||   |||||||| |||||  || ||||||||||||||||||||  ||||||| || |||||| |||||||    
T  15213758 atcatatataacaattacaatttcatatcaatgtctttcacaatatataaatattttcacatttaatcatcaaagtaaatcatcattattaa-tcatctt 15213856  T
Q  393 aatcatcctctctgaacctcattataatcattaacaacttcattcctatcccaag 447  Q
    | ||||||||||| |||||||||||||||||||||||||||||||| | ||||||    
T  15213857 attcatcctctctaaacctcattataatcattaacaacttcattccaaacccaag 15213911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 268 - 447
Target Start/End: Original strand, 11085033 - 11085211
Alignment:
Q  268 cagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaaca 367  Q
    |||||||||| | | || |||||| |||| ||| ||| ||||||| |||||||||||  |||||||| |||||  ||  |||||||||||||||||||      
T  11085033 cagcaagtcaccatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatagtttcacatttaatcatcaaag 11085132  T
Q  368 taaatcaacaatattaaatcatcttaatcatcctctctgaacctcattataatcattaacaacttcattcctatcccaag 447  Q
    ||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  11085133 taaatcatcaatattaa-tcatcttattcatcctctctgaacctcattataatcattaataacttcattcctaccccaag 11085211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 286 - 447
Target Start/End: Original strand, 11092789 - 11092949
Alignment:
Q  286 aataattatcaaatacaaccattacaacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaa 385  Q
    |||||| |||| ||| ||| ||||||| |||||||||||| |||||||| |||||  || ||||||||||||||||||||  ||||||| ||||||| ||    
T  11092789 aataatcatcatatataacaattacaatttcatatcaacatctttcacaatatataaatattttcacatttaatcatcaaagtaaatcatcaatatt-aa 11092887  T
Q  386 tcatcttaatcatcctctctgaacctcattataatcattaacaacttcattcctatcccaag 447  Q
    |||||||| |||  ||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  11092888 tcatcttattcacactctctgaacctcattataatcattaataacttcattcctaccccaag 11092949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 18302016 - 18302143
Alignment:
Q  196 aacttaaacaaacattagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattat 294  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||  |||||||||||| || |||| || | | ||||||||| ||    
T  18302016 aacttaaaccaacattagcatcttaatgatattaatacatcacatcagcaaggcaacaacatcaaataatttacaacaagccaacatcaacaataatcat 18302115  T
Q  295 caaatacaaccattacaacttcatatca 322  Q
    ||||||||| ||||||||||||||||||    
T  18302116 caaatacaatcattacaacttcatatca 18302143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 113 - 334
Target Start/End: Original strand, 12371317 - 12371526
Alignment:
Q  113 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 211  Q
    ||||||||||  ||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| |||| |||||||||| || ||||||    
T  12371317 atggactcaatgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagactaacatt 12371415  T
Q  212 agcatcttaatgatattaatacatcacattacaaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattaca 311  Q
    |||||| ||||          ||  |||   ||||||||||| || ||||||| | |||||||||| | | ||||||||| ||| |||| ||||||||||    
T  12371416 agcatcctaat----------cacgaca--gcaaggcaacaccattaaataatatgcagcaagtcaacatcaacaataatcatccaatataaccattaca 12371503  T
Q  312 acttcatatcaacaactttcaca 334  Q
    |||||||||||||| ||||||||    
T  12371504 acttcatatcaacatctttcaca 12371526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 113 - 222
Target Start/End: Original strand, 11066507 - 11066616
Alignment:
Q  113 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 211  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| |||| |||||||||| || ||||||    
T  11066507 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacatt 11066605  T
Q  212 agcatcttaat 222  Q
    |||||| ||||    
T  11066606 agcatcctaat 11066616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 113 - 215
Target Start/End: Complemental strand, 59405 - 59303
Alignment:
Q  113 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 211  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| |||| |||||||||| || ||||||    
T  59405 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacatt 59307  T
Q  212 agca 215  Q
    ||||    
T  59306 agca 59303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 113 - 222
Target Start/End: Complemental strand, 8852178 - 8852069
Alignment:
Q  113 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 211  Q
    ||||||||||  ||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| |||| |||||||||| || ||||||    
T  8852178 atggactcaatgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacatt 8852080  T
Q  212 agcatcttaat 222  Q
    |||||| ||||    
T  8852079 agcatcctaat 8852069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 113 - 222
Target Start/End: Complemental strand, 12128177 - 12128068
Alignment:
Q  113 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 211  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| |||| |||||||||  || ||||||    
T  12128177 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaacaacttcgaccaacatt 12128079  T
Q  212 agcatcttaat 222  Q
    |||||| ||||    
T  12128078 agcatcctaat 12128068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 113 - 216
Target Start/End: Complemental strand, 32434602 - 32434499
Alignment:
Q  113 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 211  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||| ||||||||||  |||||||||| |||| |||||||||| || ||||||    
T  32434602 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactcaaataatttggatcaacatcttacaacttaaacaacttagaccaacatt 32434504  T
Q  212 agcat 216  Q
    |||||    
T  32434503 agcat 32434499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 286 - 395
Target Start/End: Complemental strand, 9320529 - 9320421
Alignment:
Q  286 aataattatcaaatacaaccattacaacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaa 385  Q
    |||||| |||| ||| ||| ||||||| |||||||||||  |||||||| |||||  || |||||||||||||||||||| |||||||| ||||||| ||    
T  9320529 aataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaaaataaatcatcaatatt-aa 9320431  T
Q  386 tcatcttaat 395  Q
    ||||||||||    
T  9320430 tcatcttaat 9320421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 365
Target Start/End: Original strand, 38480125 - 38480368
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    |||| ||||| |||||||| | ||||||||||||||||||||| |||||||||||||||||||  |||||||||| ||||  ||||||||| |           
T  38480125 caatagactctacatctta-cgacttaacaacttagacatctcatatgactccaataatttggatcaacatcttacaact-taacaacttaga------- 38480215  T
Q  211 tagcatcttaatgatattaatacatcacatta-caaggcaaca-caatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccatt 308  Q
        ||||||||| ||||||| |||||||  | |||| ||||| || | |||| || | |||||||||| | | || |||||| |||| ||| ||| |||    
T  38480216 ---tatcttaatggtattaattcatcacaacagcaagacaacatcatttaaat-atatgcagcaagtcaccatcaataataatcatcatatataacaatt 38480311  T
Q  309 acaacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaa 365  Q
    ||||||||||||||||  |||||||| |||||  || ||||||||||||||||||||    
T  38480312 acaacttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaa 38480368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 111 - 190
Target Start/End: Original strand, 48811939 - 48812017
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataact 190  Q
    ||||||||||||||||||| | ||||||||||||||| ||||| |||||||||||||||||||  |||||||||| ||||    
T  48811939 caatggactcaacatctta-cgacttaacaacttagatatctcatatgactccaataatttggatcaacatcttacaact 48812017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 243 - 334
Target Start/End: Complemental strand, 13148367 - 13148276
Alignment:
Q  243 caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcaca 334  Q
    ||||||| ||| || ||||||| | |||||||||| | | ||||||||| ||| |||| |||||||||||||||||||||||| ||||||||    
T  13148367 caaggcagcaccattaaataatatgcagcaagtcaacatcaacaataatcatctaatataaccattacaacttcatatcaacatctttcaca 13148276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 190
Target Start/End: Complemental strand, 46387075 - 46386998
Alignment:
Q  113 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataact 190  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| ||||    
T  46387075 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaact 46386998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 393
Target Start/End: Complemental strand, 11392006 - 11391871
Alignment:
Q  258 aaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacattatattgatcttt-tcacattt 356  Q
    ||||||| | |||||||||| | | ||||||||| ||| |||| ||||||||||||||| ||| | || |||||||| |||||  ||||||   ||||||    
T  11392006 aaataatatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcttatgagcatctttcacaatatataaatctttcgtacattt 11391907  T
Q  357 aatcatcaacataaatcaacaatattaaatcatctta 393  Q
    |||||||||  |||||| |||| ||| ||||||||||    
T  11391906 aatcatcaatttaaatccacaacatt-aatcatctta 11391871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 138 - 222
Target Start/End: Complemental strand, 11392113 - 11392030
Alignment:
Q  138 acaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaat 222  Q
    ||||||||||| |||| |||||||||||||||||||  ||| |||||| || | |||||||||| || |||||||||||| ||||    
T  11392113 acaacttagac-tctcatatgactccaataatttggatcaaaatcttacaatttaaacaacttagaccaacattagcatcctaat 11392030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 243 - 340
Target Start/End: Complemental strand, 8852060 - 8851963
Alignment:
Q  243 caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacattatat 340  Q
    ||||||||||| || ||||||| | ||| |||||| | | ||||||||| |||  ||| |||||||||||||| ||||||| | |||||||| |||||    
T  8852060 caaggcaacaccattaaataatatgcagtaagtcaacatcaacaataatcatcccatataaccattacaactttatatcaaaatctttcacaatatat 8851963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 334
Target Start/End: Original strand, 11066625 - 11066716
Alignment:
Q  243 caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcaca 334  Q
    ||||||| ||| || ||||||| | |||||||||| |   |||||| || ||| |||| ||| |||||||||||||||||||| ||||||||    
T  11066625 caaggcagcaccattaaataatatgcagcaagtcaacaacaacaatgatcatccaatataactattacaacttcatatcaacatctttcaca 11066716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 332
Target Start/End: Complemental strand, 32434443 - 32434396
Alignment:
Q  285 caataattatcaaatacaaccattacaacttcatatcaacaactttca 332  Q
    ||||||| ||| |||| |||||||||||||||||||||||| ||||||    
T  32434443 caataatcatccaatataaccattacaacttcatatcaacatctttca 32434396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 173; Significance: 7e-93; HSPs: 3)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 111 - 374
Target Start/End: Complemental strand, 44142 - 43879
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||    
T  44142 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttggaccaacatcttataacttaaacaacttaaaccaacat 44043  T
Q  211 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccatta 309  Q
    |||||||||||||||||||||||||||||| | ||||||||||  |||||||||||| |||||||||||| | ||||||||| |||||||||||||||||    
T  44042 tagcatcttaatgatattaatacatcacatcagcaaggcaacatcatcaaataatttacagcaagtcatcatcaacaataatcatcaaatacaaccatta 43943  T
Q  310 caacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatca 374  Q
    ||||||||||||| || |||||||| |||||  || || ||||| |||||||||||  |||||||    
T  43942 caacttcatatcagcatctttcacaatatataaatattctcaca-ttaatcatcaaagtaaatca 43879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 310 - 424
Target Start/End: Complemental strand, 43796 - 43682
Alignment:
Q  310 caacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatcttaatcatcctctctgaac 409  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  43796 caactccatatcaacaactttcacattatatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttaatcatcctctctgaac 43697  T
Q  410 ctcattataatcatt 424  Q
    |||||||||||||||    
T  43696 ctcattataatcatt 43682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 310 - 424
Target Start/End: Complemental strand, 47716 - 47602
Alignment:
Q  310 caacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatcttaatcatcctctctgaac 409  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  47716 caactacatatcaacaactttcacattatatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttaatcatcctctctgaac 47617  T
Q  410 ctcattataatcatt 424  Q
    |||||||||||||||    
T  47616 ctcattataatcatt 47602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 173; Significance: 7e-93; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 111 - 374
Target Start/End: Complemental strand, 25956979 - 25956716
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||    
T  25956979 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttggaccaacatcttataacttaaacaacttaaaccaacat 25956880  T
Q  211 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccatta 309  Q
    |||||||||||||||||||||||||||||| | ||||||||||  |||||||||||| |||||||||||| | ||||||||| |||||||||||||||||    
T  25956879 tagcatcttaatgatattaatacatcacatcagcaaggcaacatcatcaaataatttacagcaagtcatcatcaacaataatcatcaaatacaaccatta 25956780  T
Q  310 caacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatca 374  Q
    ||||||||||||| || |||||||| |||||  || || ||||| |||||||||||  |||||||    
T  25956779 caacttcatatcagcatctttcacaatatataaatattctcaca-ttaatcatcaaagtaaatca 25956716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 111 - 340
Target Start/End: Original strand, 27850940 - 27851161
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||         |||||||||| |||||    
T  27850940 caattgactcaacatcttaacaacttaacaacttagacatctcgtatgactccaataatttggaccaacatctta---------caacttaaaccaacat 27851030  T
Q  211 tagcatcttaatgatattaatacatcacattac-aaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccatta 309  Q
    |||||||||||||||||||||||||||||| |  |||||||||| |||||||||||| |||||||||| | |  |||||||| |||||||||||||| ||    
T  27851031 tagcatcttaatgatattaatacatcacatcagtaaggcaacaccatcaaataatttgcagcaagtcaacatcgacaataatcatcaaatacaaccaata 27851130  T
Q  310 caacttcatatcaacaactttcacattatat 340  Q
    ||||||||||||| || |||||||| |||||    
T  27851131 caacttcatatcagcatctttcacaatatat 27851161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 310 - 424
Target Start/End: Complemental strand, 25956633 - 25956519
Alignment:
Q  310 caacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatcttaatcatcctctctgaac 409  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  25956633 caactccatatcaacaactttcacattatatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttaatcatcctctctgaac 25956534  T
Q  410 ctcattataatcatt 424  Q
    |||||||||||||||    
T  25956533 ctcattataatcatt 25956519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 185 - 377
Target Start/End: Complemental strand, 31630811 - 31630619
Alignment:
Q  185 ataactgaaacaacttaaacaaacattagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatcttta 283  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| | |||| |||||| |||||||||||| |||||||||| | | |    
T  31630811 ataacttaaacaacttaaaccaacattagcatcttaatgatattaatacatcacatcaacaagacaacaccatcaaataatttacagcaagtcaacatca 31630712  T
Q  284 acaataattatcaaatacaaccattacaacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaaca 377  Q
    |||||||| ||| ||||||||||||| ||||||||||||||| |||||||| |||||  || || ||||| |||||||||||  ||||||||||    
T  31630711 acaataatcatctaatacaaccattataacttcatatcaacatctttcacaatatataaatattctcaca-ttaatcatcaaagtaaatcaaca 31630619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 161 - 365
Target Start/End: Original strand, 19399684 - 19399889
Alignment:
Q  161 tccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaa 259  Q
    ||||||| |||||  |||||||||| |||| |||||||||| || ||||||||||||||||||||| ||||||||||||  | |||||||  || || ||    
T  19399684 tccaatactttggatcaacatcttacaacttaaacaacttagaccaacattagcatcttaatgataataatacatcacaaaagcaaggcagaaccattaa 19399783  T
Q  260 ataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacattatattgatcttttcacatttaat 359  Q
    ||||| | |||||||||| | | ||||||||| |||||||| |||||||||||||||||||||||| |||||||| |||||  || ||||||||||||||    
T  19399784 ataatatgcagcaagtcaacatcaacaataatcatcaaatataaccattacaacttcatatcaacatctttcacaatatataaatattttcacatttaat 19399883  T
Q  360 catcaa 365  Q
    ||||||    
T  19399884 catcaa 19399889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 111 - 447
Target Start/End: Complemental strand, 20734410 - 20734086
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    |||||||||||||||||||  | |||||||||||||| ||||| |||||||||||||||||||  |||||||||| |||| || |||||| |            
T  20734410 caatggactcaacatcttatga-cttaacaacttagatatctcatatgactccaataatttggatcaacatcttacaacttaa-caacttga-------- 20734321  T
Q  211 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccatta 309  Q
       |||||||||| ||||||| |||||||  | |||| |||||| ||  ||  || | |||||||||| | | || |||||| |||| ||| ||| ||||    
T  20734320 ---catcttaatggtattaattcatcacaacagcaagacaacaccatttaaacatatgcagcaagtcaccatcaataataatcatcatatataacaatta 20734224  T
Q  310 caacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatcttaatcatcctctctgaac 409  Q
    ||| |||||||||||  |||||||| |||||  || ||||||||||||||||||||  ||||||| ||||| |||||||| ||| |||||||||||||||    
T  20734223 caatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaaagtaaatcatcaata-taaatcattttattcatcctctctgaac 20734125  T
Q  410 ctcattataatcattaacaa-cttcattcctatcccaag 447  Q
    |||||||||||||||||||| ||||||||||| ||||||    
T  20734124 ctcattataatcattaacaaccttcattcctaccccaag 20734086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 206 - 447
Target Start/End: Complemental strand, 34297149 - 34296909
Alignment:
Q  206 aacattagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaac 304  Q
    |||||||| ||||| ||||||||||||| |||||    ||||| ||||| || ||||||| | |||||||||| | |||| |||||| |||| ||| |||    
T  34297149 aacattag-atcttcatgatattaatacgtcacaaccgcaaggaaacaccattaaataatatgcagcaagtcaacattaataataatcatcatatataac 34297051  T
Q  305 cattacaacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatcttaatcatcctctc 404  Q
     ||||||| |||||||||||  |||||||| |||||  || ||||||||| ||||||||||  ||||||| || |||||| |||||||| |||||||||     
T  34297050 aattacaatttcatatcaacgtctttcacaatatataaatattttcacatctaatcatcaaagtaaatcatcattattaa-tcatcttattcatcctctt 34296952  T
Q  405 tgaacctcattataatcattaacaacttcattcctatcccaag 447  Q
    |||||||||||||||||||||||||||||||||| | ||||||    
T  34296951 tgaacctcattataatcattaacaacttcattccaaccccaag 34296909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 306 - 446
Target Start/End: Original strand, 27851274 - 27851414
Alignment:
Q  306 attacaacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatcttaatcatcctctct 405  Q
    ||||||| |||||||||||  |||||||| |||||  || ||||||||||||||||||||  ||||||| |||||| ||||||||||| |||||||||||    
T  27851274 attacaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaaggtaaatcatcaatat-aaatcatcttattcatcctctct 27851372  T
Q  406 gaacctcattataatcattaacaa-cttcattcctatcccaa 446  Q
    |||||||||||||||||||||||| || |||||||| |||||    
T  27851373 gaacctcattataatcattaacaacctccattcctaccccaa 27851414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 113 - 334
Target Start/End: Original strand, 18708539 - 18708748
Alignment:
Q  113 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 211  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| |||| |||||||||| || ||||||    
T  18708539 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacatt 18708637  T
Q  212 agcatcttaatgatattaatacatcacattacaaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattaca 311  Q
    |||||| ||||          ||  |||   ||||||| ||| || ||||||| | |||||||||| | | ||||||||| ||| |||| ||||||||||    
T  18708638 agcatcctaat----------cacgaca--gcaaggcatcaccattaaataatatgcagcaagtcaacataaacaataatcatccaatataaccattaca 18708725  T
Q  312 acttcatatcaacaactttcaca 334  Q
    |||||||||||||| ||||||||    
T  18708726 acttcatatcaacatctttcaca 18708748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 243 - 384
Target Start/End: Original strand, 18927833 - 18927973
Alignment:
Q  243 caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacattatattg 342  Q
    ||||||| ||| || ||||||| | |||||||||| | | ||||||||| ||| |||| |||||||||||||||||||||||| |||||||| |||||      
T  18927833 caaggcagcaccattaaataatatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacatctttcacaatatataa 18927932  T
Q  343 atcttttcacatttaatcatcaacataaatcaacaatattaa 384  Q
    ||| |||||||||||||||||||| |||||| |||| |||||    
T  18927933 atc-tttcacatttaatcatcaacttaaatccacaacattaa 18927973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 113 - 334
Target Start/End: Complemental strand, 23151279 - 23151070
Alignment:
Q  113 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 211  Q
    ||||||||||| ||||| |||| ||| ||||||||||||||| |||||||||||||||||||  ||||||||||  ||| |||||||||| || ||||||    
T  23151279 atggactcaacgtctta-caacataaacaacttagacatctcatatgactccaataatttggatcaacatcttacgacttaaacaacttagaccaacatt 23151181  T
Q  212 agcatcttaatgatattaatacatcac-attacaaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattac 310  Q
    |||||| ||             ||||| ||  ||||||| ||| || ||||||| | |||||||||| | ||||||||||| ||| |||| |||||||||    
T  23151180 agcatccta-------------atcacgatagcaaggcagcaccattaaataatatgcagcaagtcaacattaacaataatcatccaatataaccattac 23151094  T
Q  311 aacttcatatcaacaactttcaca 334  Q
    ||||||||||||||| ||||||||    
T  23151093 aacttcatatcaacatctttcaca 23151070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 113 - 227
Target Start/End: Complemental strand, 17319083 - 17318969
Alignment:
Q  113 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 211  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| |||| |||||||||| || |||||     
T  17319083 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacata 17318985  T
Q  212 agcatcttaatgatat 227  Q
     ||  |||||||||||    
T  17318984 tgctacttaatgatat 17318969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 113 - 199
Target Start/End: Complemental strand, 27323631 - 27323545
Alignment:
Q  113 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaact 199  Q
    ||||||||||||||||| |||||||| ||||||||||||||| |||||| ||||||||||||  |||||||||| |||| ||||||||    
T  27323631 atggactcaacatctta-caacttaaacaacttagacatctcatatgacgccaataatttggatcaacatcttacaacttaaacaact 27323545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 113 - 196
Target Start/End: Original strand, 31733753 - 31733836
Alignment:
Q  113 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaaca 196  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| |||| |||||    
T  31733753 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaaca 31733836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 394
Target Start/End: Original strand, 2201153 - 2201278
Alignment:
Q  268 cagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaaca 367  Q
    |||||||||| | | || |||||| |||| ||| ||| ||||||| |||||||||||  |||||||| |||||  || |||||| |||||||||||||      
T  2201153 cagcaagtcaccatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatattttcatatttaatcatcaaag 2201252  T
Q  368 taaatcaacaatattaaatcatcttaa 394  Q
    ||||||| ||||||| |||||||||||    
T  2201253 taaatcatcaatatt-aatcatcttaa 2201278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 286 - 384
Target Start/End: Original strand, 22421019 - 22421117
Alignment:
Q  286 aataattatcaaatacaaccattacaacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaa 384  Q
    |||||| |||| ||| ||| ||||||| |||||||||||  |||||||| |||||  || ||||||||||||||||||||  ||||||| |||||||||    
T  22421019 aataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaaagtaaatcatcaatattaa 22421117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 258 - 334
Target Start/End: Complemental strand, 27322298 - 27322222
Alignment:
Q  258 aaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcaca 334  Q
    ||||||| | |||||||||| | | ||||||||| ||| |||| |||||||||||||||||||||||| ||||||||    
T  27322298 aaataatatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacatctttcaca 27322222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 138 - 222
Target Start/End: Original strand, 28708539 - 28708622
Alignment:
Q  138 acaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaat 222  Q
    ||||||||||| |||| |||||||||||||||||||  ||| |||||| || | |||||||||| || |||||||||||| ||||    
T  28708539 acaacttagac-tctcatatgactccaataatttggatcaaaatcttacaatttaaacaacttagaccaacattagcatcctaat 28708622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 365
Target Start/End: Original strand, 28708636 - 28708754
Alignment:
Q  248 caacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacattatattgatctt 347  Q
    |||||| || ||||||| | |||||||||| | | ||||||||| ||| |||| ||||||||||||||| ||| | || |||||||| |||||  |||||    
T  28708636 caacactattaaataatatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcttatgagcatctttcacaatatataaatctt 28708735  T
Q  348 t-tcacatttaatcatcaa 365  Q
    |   |||||||||||||||    
T  28708736 tcgtacatttaatcatcaa 28708754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 31733825 - 31733887
Alignment:
Q  138 acaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaactt 200  Q
    |||||||| ||||||| |||||||||||||||||||  |||||||||| ||||  ||||||||    
T  31733825 acaacttaaacatctcatatgactccaataatttggatcaacatcttacaactttaacaactt 31733887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 167; Significance: 3e-89; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 111 - 393
Target Start/End: Complemental strand, 49390028 - 49389744
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||    
T  49390028 caatgaactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttggaccaacatcttataacttaaacaacttaaaccaacat 49389929  T
Q  211 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccatta 309  Q
    || ||||||||||||||||| ||||||||| | ||||||||||| |||||||||||| |||||||||| | | ||||||||| |||||||| ||| ||||    
T  49389928 taacatcttaatgatattaacacatcacatcagcaaggcaacaccatcaaataatttacagcaagtcaacatcaacaataatcatcaaatataacaatta 49389829  T
Q  310 caacttcatatcaacaactttcacattatattga--tcttttcacatttaatcatcaacataaatcaacaatattaaatcatctta 393  Q
    |||||||||||||||||||| |||| |||||  |  | ||||||||||||||||||||| | || |||||||||||| ||||||||    
T  49389828 caacttcatatcaacaactt-cacaatatatctaaatattttcacatttaatcatcaactttaaacaacaatattaattcatctta 49389744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 111 - 374
Target Start/End: Complemental strand, 18440206 - 18439942
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacat-ctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaaca 209  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||    
T  18440206 caatggactcaacatcttaacaacttaacaacttagacattctcttatgactccaataatttggaccaacatcttataacttaaacaacttaaaccaaca 18440107  T
Q  210 ttagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccatt 308  Q
    ||||||||||||||||||||||||||||| | | |||| |||||| |||||||||||| ||||| |||||| | ||||||||| ||||||||||||||||    
T  18440106 ttagcatcttaatgatattaatacatcacctcagcaagacaacaccatcaaataatttacagcaggtcatcatcaacaataatcatcaaatacaaccatt 18440007  T
Q  309 acaacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatca 374  Q
    |||||||||||||| || |||||||| ||||| ||| || ||||| |||||||||||  |||||||    
T  18440006 acaacttcatatcatcatctttcacaatatatagatattctcaca-ttaatcatcaaagtaaatca 18439942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 259 - 451
Target Start/End: Complemental strand, 1989059 - 1988867
Alignment:
Q  259 aataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacattatattgatcttttcacatttaa 358  Q
    |||||||  |||||||||| | | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  1989059 aataattcacagcaagtcaacatcaacaataatcatcaaatacaaccattacaacttcatatcaacaactttcacattatatagatcttttcacatttaa 1988960  T
Q  359 tcatcaacataaatcaacaatattaaatcatcttaatcatcctctctgaacctcattataatcattaacaacttcattcctatcccaagatca 451  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  1988959 tcatcaacgtgaatcaacaatattaaatcatcttaatcatcctctctgaacctcattataatcattaacatcttcattcctatcccaagatca 1988867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 129 - 340
Target Start/End: Complemental strand, 20630437 - 20630225
Alignment:
Q  129 aacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatatt 228  Q
    |||| |||| |||||||||||||||||||||||||||||||||||  |||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  20630437 aacatcttaccaacttagacatctcttatgactccaataatttggatcaacatcttacaacttaaacaacttaaacaaacattagcatcttaatgatatt 20630338  T
Q  229 aatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaac 327  Q
    |||||||||||| | ||||||||||  |||||||||||| |||||||||| | | ||||||||| ||| ||||||||||||||||||||||||||||| |    
T  20630337 aatacatcacatcagcaaggcaacaacatcaaataatttacagcaagtcaacatcaacaataatcatctaatacaaccattacaacttcatatcaacatc 20630238  T
Q  328 tttcacattatat 340  Q
    ||||||| |||||    
T  20630237 tttcacaatatat 20630225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 111 - 322
Target Start/End: Original strand, 14500897 - 14501109
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||| |||||||| |||||    
T  14500897 caatggactcaacatcctaaaaacttaacaacttagacatctcttatgactccaataaattgggccgacatcttataactcaaacgacttaaaccaacat 14500996  T
Q  211 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccatta 309  Q
    |||||||||||||||||||||| ||||||||| ||||||||||  |||| ||||||| || ||||||| | | ||||||||| ||||||||||  |||||    
T  14500997 tagcatcttaatgatattaatatatcacattagcaaggcaacaacatcatataatttgcaacaagtcaacatcaacaataatcatcaaatacattcatta 14501096  T
Q  310 caacttcatatca 322  Q
    |||||||||||||    
T  14501097 caacttcatatca 14501109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 111 - 447
Target Start/End: Complemental strand, 31224918 - 31224594
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    ||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||  |||||||||| |||| || |||||||||||         
T  31224918 caatggactcaacatctta-cgacttaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaa-caacttaaaca----- 31224826  T
Q  211 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccatta 309  Q
         |||||||| ||||||| |||||||  | |||| |||||  ||  ||  || | |||||||||| | | || |||||| |||| ||| ||| ||||    
T  31224825 -----tcttaatggtattaattcatcacaacagcaagacaacatcatttaaacatatgcagcaagtcaccatcaataataatcatcatatataacaatta 31224731  T
Q  310 caacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatcttaatcatcctctctgaac 409  Q
    |||||||||||||||  ||||||||||||||  || ||||||||||||||||||||  |||| || ||||||| |||||||||| |||||||||||||||    
T  31224730 caacttcatatcaacgtctttcacattatataaatattttcacatttaatcatcaaagtaaaacatcaatatt-aatcatcttattcatcctctctgaac 31224632  T
Q  410 ctcattataatcattaacaacttcattcctatcccaag 447  Q
    |||||||||||||||||||| |||||||| | ||||||    
T  31224631 ctcattataatcattaacaaattcattccgaccccaag 31224594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 111 - 334
Target Start/End: Complemental strand, 1465768 - 1465545
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||| |||||||||| || |||||    
T  1465768 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacat 1465669  T
Q  211 tagcatcttaatgatattaatacatcac-attacaaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccatta 309  Q
    ||| ||||| |||||||||||||  ||| |  |||||||||||| || ||||||| | |||||||||| | | |||||||||  |||||| |||||||||    
T  1465668 tag-atcttcatgatattaatacgccacaaccacaaggcaacaccattaaataatatgcagcaagtcaacatcaacaataatcgtcaaatccaaccatta 1465570  T
Q  310 caacttcatatcaacaactttcaca 334  Q
    | ||||||||| | || ||||||||    
T  1465569 cgacttcatataagcatctttcaca 1465545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 111 - 440
Target Start/End: Complemental strand, 15447961 - 15447647
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    ||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||  ||| |||||| |||| || ||||||| |||         
T  15447961 caatggactcaacatctta-cgacttaacaacttagacatctcatatgactccaataatttggatcaatatcttacaacttaa-caacttagaca----- 15447869  T
Q  211 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccatta 309  Q
         |||||||| ||||||| |||||||  | |||| |||||  ||  ||  || | || ||||||| | |   ||||||| |||| ||| ||| ||||    
T  15447868 -----tcttaatggtattaattcatcacaacagcaagacaacatcatttaaacatatgcatcaagtcaccat---caataataatcatatataacaatta 15447777  T
Q  310 caacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatcttaatcatcctctctgaac 409  Q
    |||||||||||||||  ||||||||||||||  || ||||||||||||||||||||  ||||||| ||||||| |||||||||| |||||||||||||||    
T  15447776 caacttcatatcaacgtctttcacattatatgaatattttcacatttaatcatcaaagtaaatcatcaatatt-aatcatcttattcatcctctctgaac 15447678  T
Q  410 ctcattataatcattaacaacttcattccta 440  Q
    |||||||||||||||||||| ||||||||||    
T  15447677 ctcattataatcattaacaatttcattccta 15447647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 161 - 374
Target Start/End: Complemental strand, 49970178 - 49969964
Alignment:
Q  161 tccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaa 259  Q
    ||||||| |||||  |||||||||| |||| |||||||||| || ||||||||||||||||||||| ||||||||||||  | |||||||  || || ||    
T  49970178 tccaatactttggatcaacatcttacaacttaaacaacttagaccaacattagcatcttaatgataataatacatcacaacagcaaggcagtaccattaa 49970079  T
Q  260 ataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacattatattgatcttttcacatttaat 359  Q
    ||||| | |||||||||| | | ||||||||| |||||||| |||||||||||||||||||||||| |||||||| |||||  || ||||||||||||||    
T  49970078 ataatatgcagcaagtcaacatcaacaataatcatcaaatataaccattacaacttcatatcaacatctttcacaatatataaatattttcacatttaat 49969979  T
Q  360 catcaacataaatca 374  Q
    ||||||  |||||||    
T  49969978 catcaaagtaaatca 49969964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 243 - 447
Target Start/End: Original strand, 11912930 - 11913133
Alignment:
Q  243 caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacattatattg 342  Q
    ||||||||||| || ||||||| | || ||||||| | | || |||||| |||| ||| ||| ||||||| |||||||||||  |||||||| |||||      
T  11912930 caaggcaacaccattaaataatatgcatcaagtcaacatcaataataataatcatatataacaattacaatttcatatcaacgtctttcacaatatataa 11913029  T
Q  343 atcttttcacatttaatcatcaacataaatcaacaatattaaatcatcttaatcatcctctctgaacctcattataatcattaacaacttcattcctatc 442  Q
    || ||||||||||||||||||||  ||||||| || |||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |    
T  11913030 atattttcacatttaatcatcaaagtaaatcatcattattaa-tcatcttattcatcctctctgaacctaattataatcattaacaacttcattcctacc 11913128  T
Q  443 ccaag 447  Q
    |||||    
T  11913129 ccaag 11913133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 129 - 374
Target Start/End: Original strand, 12269351 - 12269596
Alignment:
Q  129 aacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatatt 228  Q
    |||| |||||||||||||||||||| |||||||||||||||||||  ||||| |||| |||| |||||||||| || |||||||||| ||||||||||||    
T  12269351 aacatcttaacaacttagacatctcatatgactccaataatttggatcaacaccttacaacttaaacaacttatactaacattagcaccttaatgatatt 12269450  T
Q  229 aatacatcac-attacaaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaac 327  Q
    |||| | ||| | | ||||||||||| || || |||| | ||||| |||| | | ||||||||| |||||||| || ||||||||||||||||||||  |    
T  12269451 aatagaccacgactgcaaggcaacactattaactaatatgcagcacgtcaacatcaacaataatcatcaaatataatcattacaacttcatatcaacgtc 12269550  T
Q  328 tttcacattatattgatcttttcacatttaatcatcaacataaatca 374  Q
     |||| | | |||  ||||| ||||| |||||||||||| |||||||    
T  12269551 cttcaaaatttataaatcttctcaca-ttaatcatcaacttaaatca 12269596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 138 - 322
Target Start/End: Original strand, 45796969 - 45797153
Alignment:
Q  138 acaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatattaatacatca 237  Q
    |||| ||| ||||||| |||||||||||||| ||||||| ||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| ||||    
T  45796969 acaaattaaacatctcatatgactccaataaattgggccgacatcttataactcaaacgacttaaaccaacattagcatcttaatgatattaatatatca 45797068  T
Q  238 catta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatca 322  Q
    ||| | ||||||||||  |||| |||| || || ||||||| | | ||||||||| ||||||||||  ||||||||||||||||||    
T  45797069 catcagcaaggcaacaacatcatataa-ttgcaacaagtcaacatcaacaataatcatcaaatacattcattacaacttcatatca 45797153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 138 - 322
Target Start/End: Complemental strand, 23413568 - 23413385
Alignment:
Q  138 acaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatattaatacatca 237  Q
    |||||||| |||||||  ||||||||||||||||||||| ||||||||||||| |||  |||||||| ||||||||||||||||||||||||||||||||    
T  23413568 acaacttaaacatctcaaatgactccaataatttgggccgacatcttataactcaaatgacttaaac-aacattagcatcttaatgatattaatacatca 23413470  T
Q  238 catta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatca 322  Q
    ||| | |||| |||||  ||| |||||||  || ||||||| | | |||| |||| ||||||||||| ||||||||||||||||||    
T  23413469 catcagcaagacaacaacatc-aataattcgcaacaagtcaacgtcaacagtaatcatcaaatacaatcattacaacttcatatca 23413385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 197 - 322
Target Start/End: Complemental strand, 12852631 - 12852504
Alignment:
Q  197 acttaaacaaacattagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatc 295  Q
    |||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||  |||||||||||| |||||||||| | | ||||||||| |||    
T  12852631 acttaaaccaacattagcatcttaatgatattaatacatcacatcagcaaggcaacaacatcaaataatttacagcaagtcaacatcaacaataatcatc 12852532  T
Q  296 aaatacaaccattac-aacttcatatca 322  Q
    |||||||| |||||| ||||||||||||    
T  12852531 aaatacaatcattacaaacttcatatca 12852504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 308 - 446
Target Start/End: Original strand, 12269677 - 12269812
Alignment:
Q  308 tacaacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatcttaatcatcctctctga 407  Q
    ||||||||||||||||||||||||||| |||||  |||||||  |||| |||||||||| | || ||||||||||||||||||||| |||||||||||||    
T  12269677 tacaacttcatatcaacaactttcacaatatataaatcttttt-catt-aatcatcaactttaaacaacaatattaaatcatcttagtcatcctctctga 12269774  T
Q  408 acctcattataatcattaacaacttcattcctatcccaa 446  Q
    ||||||||| ||||||||| | ||||||||||| |||||    
T  12269775 acctcattacaatcattaa-agcttcattcctaccccaa 12269812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 113 - 334
Target Start/End: Original strand, 40807035 - 40807244
Alignment:
Q  113 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 211  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| |||| |||||||||| || ||||||    
T  40807035 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacatt 40807133  T
Q  212 agcatcttaatgatattaatacatcacattacaaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattaca 311  Q
    |||||| ||||          ||  |||   ||||||| ||| || ||||||| | |||||||||| | | ||||||||| ||| |||| ||||||||||    
T  40807134 agcatcctaat----------cacgaca--gcaaggcagcaccattaaataatatgcagcaagtcaacatcaacaataatcatccaatataaccattaca 40807221  T
Q  312 acttcatatcaacaactttcaca 334  Q
    |||||||||||||| ||||||||    
T  40807222 acttcatatcaacatctttcaca 40807244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 111 - 365
Target Start/End: Original strand, 31415292 - 31415535
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    ||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||  |||||||||| ||||  ||||||||| |           
T  31415292 caatggactcaacatctta-cgacttaacaacttagacatctcatatgactccaataatttggatcaacatcttacaact-taacaacttaga------- 31415382  T
Q  211 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccatta 309  Q
       |||||||||| ||||||| |||||||  | |||| |||||  ||  ||  || | |||||||||| | | || |||||| |||| ||| ||| ||||    
T  31415383 ---catcttaatggtattaattcatcacaacagcaagacaacatcatttaaacatatgcagcaagtcaccatcaataataatcatcatatataacaatta 31415479  T
Q  310 caacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaa 365  Q
    |||||||||||||||  |||||||| |||||  || ||||||||||||||||||||    
T  31415480 caacttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaa 31415535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 113 - 222
Target Start/End: Complemental strand, 30175527 - 30175418
Alignment:
Q  113 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 211  Q
    |||||||||| |||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| |||| |||||||||| || ||||||    
T  30175527 atggactcaaaatctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacatt 30175429  T
Q  212 agcatcttaat 222  Q
    |||||| ||||    
T  30175428 agcatcctaat 30175418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 113 - 217
Target Start/End: Complemental strand, 22307596 - 22307492
Alignment:
Q  113 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 211  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| |||| |||||||||| || ||||||    
T  22307596 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacatt 22307498  T
Q  212 agcatc 217  Q
    ||||||    
T  22307497 agcatc 22307492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 111 - 196
Target Start/End: Complemental strand, 23413642 - 23413557
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaaca 196  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||  ||||||| || |||| |||||    
T  23413642 caatggactcaacatcctagcaacttaacaacttagacatctcttatgactccaataatttggatcaacatcatacaacttaaaca 23413557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 45796895 - 45796969
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatctta 185  Q
    ||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||    
T  45796895 caatggacttaacatcctaacaactaaacaacttagacatctcttatgactccaataatttggatcaacatctta 45796969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 113 - 201
Target Start/End: Complemental strand, 17519918 - 17519830
Alignment:
Q  113 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaactta 201  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  ||||||||||||||| ||||||||||    
T  17519918 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttataacttaaacaactta 17519830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 113 - 201
Target Start/End: Complemental strand, 17534780 - 17534692
Alignment:
Q  113 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaactta 201  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  ||||||||||||||| ||||||||||    
T  17534780 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttataacttaaacaactta 17534692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 113 - 225
Target Start/End: Complemental strand, 41173332 - 41173220
Alignment:
Q  113 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 211  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| |||| |||||||||| || |||||     
T  41173332 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacata 41173234  T
Q  212 agcatcttaatgat 225  Q
     ||| |||||||||    
T  41173233 tgcaacttaatgat 41173220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 113 - 222
Target Start/End: Original strand, 17538146 - 17538255
Alignment:
Q  113 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 211  Q
    ||||| ||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||  |||| |||||||||| || ||||||    
T  17538146 atggagtcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatctttcaacttaaacaacttagaccaacatt 17538244  T
Q  212 agcatcttaat 222  Q
    |||||| ||||    
T  17538245 agcatcctaat 17538255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 113 - 210
Target Start/End: Original strand, 17693167 - 17693264
Alignment:
Q  113 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    |||||||||||| |||| |||||||| ||||||||||||||| |||||||||||||||||||   ||||||||| |||| |||||||||| || |||||    
T  17693167 atggactcaacaactta-caacttaaacaacttagacatctcatatgactccaataatttggattaacatcttacaacttaaacaacttagaccaacat 17693264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 111 - 190
Target Start/End: Original strand, 13516432 - 13516510
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataact 190  Q
    ||||||||||||||||||| | |||||||||||| |||||||| |||||||||||||||||||  ||| |||||| ||||    
T  13516432 caatggactcaacatctta-cgacttaacaacttggacatctcatatgactccaataatttggatcaaaatcttacaact 13516510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 190
Target Start/End: Original strand, 40811850 - 40811927
Alignment:
Q  113 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataact 190  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| ||||    
T  40811850 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaact 40811927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 113 - 200
Target Start/End: Original strand, 5214957 - 5215044
Alignment:
Q  113 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaactt 200  Q
    |||||||||||  |||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| ||||  ||||||||    
T  5214957 atggactcaacgactta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaactttaacaactt 5215044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 243 - 334
Target Start/End: Complemental strand, 22307478 - 22307387
Alignment:
Q  243 caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcaca 334  Q
    ||||||| ||| || ||||||| | |||||||||| | | ||||||||| ||| |||| || ||||||||||||||||||||| ||||||||    
T  22307478 caaggcagcaccattaaataatatgcagcaagtcaacatcaacaataatcatccaatataatcattacaacttcatatcaacatctttcaca 22307387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 248 - 365
Target Start/End: Original strand, 5841943 - 5842061
Alignment:
Q  248 caacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacattatattgatctt 347  Q
    |||||| || ||||||| | |||||||||| | | ||||||||| |||||||| ||||||||||||||| ||| | || |||||||| |||||  |||||    
T  5841943 caacactattaaataatatgcagcaagtcaacatcaacaataatcatcaaatataaccattacaacttcttatgagcatctttcacaatatataaatctt 5842042  T
Q  348 t-tcacatttaatcatcaa 365  Q
    |   |||||||||||||||    
T  5842043 tcgtacatttaatcatcaa 5842061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 306 - 384
Target Start/End: Original strand, 6808209 - 6808287
Alignment:
Q  306 attacaacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaa 384  Q
    ||||||| |||||||||||  |||||||| |||||  || ||||||||||||||||||||  ||||||| |||||||||    
T  6808209 attacaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaaagtaaatcatcaatattaa 6808287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 258 - 340
Target Start/End: Original strand, 40812010 - 40812092
Alignment:
Q  258 aaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacattatat 340  Q
    ||||||| | |||||||||| | | ||||||||| |||  ||| |||||||||||||||||||||||| |||||||| |||||    
T  40812010 aaataatatgcagcaagtcaacatcaacaataatcatcccatataaccattacaacttcatatcaacatctttcacaatatat 40812092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 17519838 - 17519785
Alignment:
Q  137 aacaacttagacatctcttatgactccaataatttgggccaacatcttataact 190  Q
    ||||||||||||||||| |||||||||||||||||||  |||||||||| ||||    
T  17519838 aacaacttagacatctcatatgactccaataatttggatcaacatcttacaact 17519785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 17534700 - 17534647
Alignment:
Q  137 aacaacttagacatctcttatgactccaataatttgggccaacatcttataact 190  Q
    ||||||||||||||||| |||||||||||||||||||  |||||||||| ||||    
T  17534700 aacaacttagacatctcatatgactccaataatttggatcaacatcttacaact 17534647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 243 - 340
Target Start/End: Complemental strand, 30175409 - 30175312
Alignment:
Q  243 caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacattatat 340  Q
    ||||||||||| || ||||||| |  ||||||||| | | ||||||||| |||  ||| | |||||||||||||||||||||| |||||||| |||||    
T  30175409 caaggcaacaccattaaataatatgaagcaagtcaacatcaacaataatcatcccatatatccattacaacttcatatcaacatctttcacagtatat 30175312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 138 - 222
Target Start/End: Original strand, 5841846 - 5841929
Alignment:
Q  138 acaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaat 222  Q
    ||||||||||| |||| |||||||||||||||||||  ||| |||||| || | |||||||||| || |||||||||||| ||||    
T  5841846 acaacttagac-tctcatatgactccaataatttggatcaaaatcttacaatttaaacaacttagaccaacattagcatcctaat 5841929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 200
Target Start/End: Complemental strand, 15932443 - 15932380
Alignment:
Q  137 aacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaactt 200  Q
    ||||||||| ||||||| |||||||||||||||||||  |||||||||| || | |||||||||    
T  15932443 aacaacttaaacatctcatatgactccaataatttggatcaacatcttacaatttaaacaactt 15932380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 334
Target Start/End: Original strand, 17538264 - 17538355
Alignment:
Q  243 caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcaca 334  Q
    ||||||| ||| || ||||||| | |||||||||| | | ||||||||| ||| |||| || || |||||||||||||||||| ||||||||    
T  17538264 caaggcagcaccattaaataatatgcagcaagtcaacatcaacaataatcatccaatataatcaatacaacttcatatcaacatctttcaca 17538355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 390 - 447
Target Start/End: Original strand, 12158623 - 12158681
Alignment:
Q  390 cttaatcatcctctctgaacctcattataatcattaacaactt-cattcctatcccaag 447  Q
    ||||| ||| |||||| |||||||||||||||||||||||||| |||||||| ||||||    
T  12158623 cttaagcatactctctcaacctcattataatcattaacaacttccattcctaccccaag 12158681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 185
Target Start/End: Complemental strand, 5206589 - 5206544
Alignment:
Q  140 aacttagacatctcttatgactccaataatttgggccaacatctta 185  Q
    |||||||||||||| |||||||||||||||||||  ||||||||||    
T  5206589 aacttagacatctcatatgactccaataatttggatcaacatctta 5206544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 135 - 190
Target Start/End: Complemental strand, 52466486 - 52466430
Alignment:
Q  135 ttaacaactta-gacatctcttatgactccaataatttgggccaacatcttataact 190  Q
    ||||||||||| |||||||| |||||||||||||||||||  |||||||||| ||||    
T  52466486 ttaacaacttaagacatctcatatgactccaataatttggatcaacatcttacaact 52466430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 200
Target Start/End: Original strand, 14507943 - 14508030
Alignment:
Q  113 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaactt 200  Q
    ||||||||||| ||||| |||||||| ||||||| | ||||  ||||||||||||||||||   |||||||||| ||||  ||||||||    
T  14507943 atggactcaacgtctta-caacttaaacaacttaaatatcttatatgactccaataatttgattcaacatcttacaactttaacaactt 14508030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 164; Significance: 2e-87; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 111 - 377
Target Start/End: Complemental strand, 38550349 - 38550083
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||| ||||||||||||| |||||    
T  38550349 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttggatcaacatcttacaacttaaacaacttaaaccaacat 38550250  T
Q  211 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccatta 309  Q
    |||||||||||||||||||||||||||||| | |||| |||||| |||||||||||| |||||||||| | | ||||||||| ||| |||||||||||||    
T  38550249 tagcatcttaatgatattaatacatcacatcagcaagacaacaccatcaaataatttacagcaagtcaacatcaacaataatcatctaatacaaccatta 38550150  T
Q  310 caacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaaca 377  Q
    |||||||||||||||| |||||||| |||||  || || ||||| |||||||||||  ||||||||||    
T  38550149 caacttcatatcaacatctttcacaatatataaatattctcaca-ttaatcatcaaagtaaatcaaca 38550083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 111 - 340
Target Start/End: Complemental strand, 20982983 - 20982753
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||| |||||| ||||||||||||    
T  20982983 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttggatcaacatcttacaacttaaacaatttaaacaaacat 20982884  T
Q  211 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccatta 309  Q
    || ||||||||||||||||||||||||||| | ||||||||||| |||||||||||| |||||| ||| | | ||||||||| ||| |||||||||||||    
T  20982883 taacatcttaatgatattaatacatcacatcagcaaggcaacaccatcaaataatttacagcaaatcaacatcaacaataatcatctaatacaaccatta 20982784  T
Q  310 caacttcatatcaacaactttcacattatat 340  Q
    |||||||||||||| | |||||||| |||||    
T  20982783 caacttcatatcaatatctttcacaatatat 20982753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 129 - 377
Target Start/End: Complemental strand, 27472636 - 27472388
Alignment:
Q  129 aacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatatt 228  Q
    |||| ||||||||||||||||||||||||||||||||||||||||  |||||||||| |||| ||||||||||||| |||||||||||||||||||||||    
T  27472636 aacatcttaacaacttagacatctcttatgactccaataatttggatcaacatcttacaacttaaacaacttaaaccaacattagcatcttaatgatatt 27472537  T
Q  229 aatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaac 327  Q
    |||||||||||| | ||||||||||| |||||||||||| |||||||||| | | ||||||||| ||| ||||||||||||||||||||||||||||| |    
T  27472536 aatacatcacatcagcaaggcaacaccatcaaataatttacagcaagtcaacatcaacaataatcatctaatacaaccattacaacttcatatcaacatc 27472437  T
Q  328 tttcacattatattgatcttttcacatttaatcatcaacataaatcaaca 377  Q
    ||||||| |||||  || || ||||| |||||||||||  ||||||||||    
T  27472436 tttcacaatatataaatattctcaca-ttaatcatcaaagtaaatcaaca 27472388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 176 - 434
Target Start/End: Original strand, 18760476 - 18760734
Alignment:
Q  176 caacatcttataactgaaacaacttaaacaaacattagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaag 274  Q
    |||| ||||| |||| |||||||||| || |||||||||||||||||||||||||||||||||| || ||||||| ||| || ||||||| | |||||||    
T  18760476 caacgtcttacaacttaaacaacttagaccaacattagcatcttaatgatattaatacatcacaatagcaaggcatcaccattaaataatatgcagcaag 18760575  T
Q  275 tcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatca 374  Q
    ||| | | ||||||||| |||||||| |||||||| ||||||||||||||| |||||||| |||||  ||||||||||||||||||||| || |||| |     
T  18760576 tcaacatcaacaataatcatcaaatataaccattataacttcatatcaacatctttcacaatatataaatcttttcacatttaatcatctacttaaaccc 18760675  T
Q  375 acaatattaaatcatcttaatcatcctctctgaacctcattataatcattaacaacttca 434  Q
    |||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  18760676 acaatatt-aatcatcttattcatactctctgaacctcattataatcattaacaacttca 18760734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 111 - 390
Target Start/End: Original strand, 39833748 - 39834029
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||| |||| |||||||||| |  |||||    
T  39833748 caatggactcaacatcttaacaactcaacaacttagacatctcttatgactccaataatttggatcaacatcttacaacttaaacaacttagatcaacat 39833847  T
Q  211 tagcatcttaatgatattaatacatcacatta-caaggcaa-cacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaacca-t 307  Q
    ||| ||||| |||||||||||||||||||| | |||||||| ||  ||  ||  || | |||| ||| | | | || ||||||  ||| ||| ||||| |    
T  39833848 tag-atcttcatgatattaatacatcacatcagcaaggcaatcatcatttaaacatatacagcgagtaaccatcaataataatcttcatatataaccatt 39833946  T
Q  308 tacaacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatc 390  Q
    | |||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  39833947 tgcaacttcatatcaacaacattcacgttatatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatc 39834029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 111 - 451
Target Start/End: Complemental strand, 21580171 - 21579842
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    ||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||  |||||||||| |||| || ||||||| |||         
T  21580171 caatggactcaacatctta-cgacttaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaa-caacttagaca----- 21580079  T
Q  211 tagcatcttaa-tgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccatt 308  Q
         |||||| || ||||||| |||||||  | |||| |||||  ||  ||  || | |||||||||| | | || ||||||||||| ||| ||| |||    
T  21580078 -----tcttaaatggtattaattcatcacaacagcaagacaacatcatttaaacatatgcagcaagtcaccatcaataataattatcatatataacaatt 21579984  T
Q  309 acaacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatcttaatcatcctctctgaa 408  Q
    ||||||||||||||||  |||||||| |||||  || ||||||||||||||||||||  |||||||  |||||||| |||||||| ||||||||||||||    
T  21579983 acaacttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaaagtaaatcattaatattaa-tcatcttattcatcctctctgaa 21579885  T
Q  409 cctcattataatcattaacaacttcattcctatcccaagatca 451  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  21579884 cctcattataatcattaacaacttcattcctataccaagatca 21579842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 194 - 374
Target Start/End: Complemental strand, 1327300 - 1327120
Alignment:
Q  194 acaacttaaacaaacattagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataatt 292  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||| |||||||||| | | |||||||||     
T  1327300 acaacttaaaccaacattagcatcttaatgatattaatacatcacatcagcaaggcaacaccatcaaataatttacagcaagtcaacatcaacaataatc 1327201  T
Q  293 atcaaatacaaccattacaacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatca 374  Q
    ||| ||||||||||||||||||||||||||||| | |||||| |||||  || || ||||| |||||||||||  |||||||    
T  1327200 atctaatacaaccattacaacttcatatcaacatcgttcacaatatataaatattctcaca-ttaatcatcaaagtaaatca 1327120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 286 - 451
Target Start/End: Complemental strand, 29763668 - 29763504
Alignment:
Q  286 aataattatcaaatacaaccattacaacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaa 385  Q
    |||||| |||| ||| ||| |||||||||||||||||||  |||||||| |||||  || ||||||||||||||||||||  |||||||  ||||||||     
T  29763668 aataatcatcatatataacaattacaacttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaaagtaaatcattaatattaa- 29763570  T
Q  386 tcatcttaatcatcctctctgaacctcattataatcattaacaacttcattcctatcccaagatca 451  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  29763569 tcatcttattcatcctctctgaacctcattataatcattaacaacttcatttctatcccaagatca 29763504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 194 - 447
Target Start/End: Complemental strand, 42560419 - 42560167
Alignment:
Q  194 acaacttaaacaaacattagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataatt 292  Q
    |||||||| || |||||||| ||||| ||||||||||||| |||||    ||||| ||||| || ||||||| | |||||||||| | | || ||||||     
T  42560419 acaacttataccaacattag-atcttcatgatattaatacgtcacaaccgcaaggtaacaccattaaataatatgcagcaagtcaacatcaataataatc 42560321  T
Q  293 atcaaatacaaccattacaacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatctt 392  Q
    |||| ||| ||| ||||||| |||||||||||   ||||||| |||||  || ||||||||||||||||||||  ||||||| || |||||| |||||||    
T  42560320 atcatatataacaattacaatttcatatcaacgtatttcacaatatataaatattttcacatttaatcatcaaagtaaatcatcattattaa-tcatctt 42560222  T
Q  393 aatcatcctctctgaacctcattataatcattaacaacttcattcctatcccaag 447  Q
    | |||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  42560221 attcatcctctctgaacctcattataatcattaacaacttcattccaaccccaag 42560167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 111 - 306
Target Start/End: Complemental strand, 6102721 - 6102530
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    ||||||||||||||||||| | |||||| ||||    |||||| |||||||||||||||||||  |||||||||| |||| |||||||||| || |||||    
T  6102721 caatggactcaacatctta-cgacttaagaact----catctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacat 6102627  T
Q  211 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaacca 306  Q
    |||||||||||||||||||||||||||||  | ||||||||||| || ||||||| |  ||||||||| | | ||||| ||| |||||||| |||||    
T  6102626 tagcatcttaatgatattaatacatcacaacagcaaggcaacaccattaaataatatggagcaagtcaacatcaacaacaatcatcaaatataacca 6102530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 113 - 334
Target Start/End: Complemental strand, 39937023 - 39936814
Alignment:
Q  113 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 211  Q
    ||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||  ||||||||||  ||| |||||||||| || ||||||    
T  39937023 atggactcaacatctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacgacttaaacaacttagaccaacatt 39936925  T
Q  212 agcatcttaatgatattaatacatcac-attacaaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattac 310  Q
    |||||| ||             ||||| ||  ||||||| ||| || ||||||| | |||||||||| | ||||||||||| ||| |||| |||||||||    
T  39936924 agcatccta-------------atcacgatagcaaggcagcaccattaaataatatgcagcaagtcaacattaacaataatcatccaatataaccattac 39936838  T
Q  311 aacttcatatcaacaactttcaca 334  Q
    ||||||||||||||| ||||||||    
T  39936837 aacttcatatcaacatctttcaca 39936814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 305 - 432
Target Start/End: Original strand, 3273211 - 3273336
Alignment:
Q  305 cattacaacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatcttaatcatcctctc 404  Q
    ||||||||||||||| |||||  ||||||| |||||  |||||| ||||||||||||||||| |||||| | || ||||| |||||||| |||| |||||    
T  3273211 cattacaacttcataccaacatttttcacaatatataaatcttt-cacatttaatcatcaacttaaatccataacattaa-tcatcttattcatactctc 3273308  T
Q  405 tgaacctcattataatcattaacaactt 432  Q
    ||||||||||||||||||||||||||||    
T  3273309 tgaacctcattataatcattaacaactt 3273336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 112 - 183
Target Start/End: Complemental strand, 13428399 - 13428328
Alignment:
Q  112 aatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatct 183  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  13428399 aatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttggatcaacatct 13428328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 111 - 173
Target Start/End: Complemental strand, 1323433 - 1323371
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgg 173  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1323433 caatgtacttaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgg 1323371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 111 - 447
Target Start/End: Complemental strand, 41681085 - 41680774
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    ||||||||||||||||||| | ||||||||||||||| ||||| |||||||||||||||||||  |||||||||| ||||  |||||||| |            
T  41681085 caatggactcaacatctta-cgacttaacaacttagatatctcatatgactccaataatttggatcaacatcttacaact-taacaacttga-------- 41680996  T
Q  211 tagcatcttaatgatattaatacatcac-attacaaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccatta 309  Q
       |||||||||| ||||||| |||||| |  ||||| || ||| ||  ||  || | |||||||||| | | || |||||| |||| ||| ||| ||||    
T  41680995 ---catcttaatggtattaattcatcacaacaacaagacatcaccatttaaacatatgcagcaagtcaccatcaataataatcatcatatataacaatta 41680899  T
Q  310 caacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatcttaatcatcctctctgaac 409  Q
    ||| || ||||||| | |||||||| |||||  || |||||||||||||||||||| |              |||||||||||| ||||||||| |||||    
T  41680898 caatttgatatcaatatctttcacaatatataaatattttcacatttaatcatcaata--------------taaatcatcttattcatcctctttgaac 41680813  T
Q  410 ctcattataatcattaacaa-cttcattcctatcccaag 447  Q
    |||||||||||||||||||| || |||||||| ||||||    
T  41680812 ctcattataatcattaacaacctccattcctaccccaag 41680774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 111 - 190
Target Start/End: Complemental strand, 29763831 - 29763753
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataact 190  Q
    ||||||||||||||||||| | ||||||||||||| ||||||| ||||||| |||||||||||  |||||||||| ||||    
T  29763831 caatggactcaacatctta-cgacttaacaacttaaacatctcatatgacttcaataatttggatcaacatcttacaact 29763753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 115 - 200
Target Start/End: Original strand, 24713262 - 24713347
Alignment:
Q  115 ggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaactt 200  Q
    ||||||||| ||||| |||||||| || |||||||||||| ||||||| |||||||||||  |||||||||| |||| |||||||||    
T  24713262 ggactcaacgtctta-caacttaaacagcttagacatctcatatgacttcaataatttggatcaacatcttacaacttaaacaactt 24713347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 268 - 374
Target Start/End: Original strand, 32807299 - 32807405
Alignment:
Q  268 cagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaaca 367  Q
    |||||||||| | | || |||||| |||| ||| ||| ||||||| |||||||||||  |||||||| |||||  || |||||||||||||||||||| |    
T  32807299 cagcaagtcaccatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaata 32807398  T
Q  368 taaatca 374  Q
    | |||||    
T  32807399 ttaatca 32807405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 390 - 447
Target Start/End: Original strand, 23450812 - 23450870
Alignment:
Q  390 cttaatcatcctctctgaacctcattataatcattaacaactt-cattcctatcccaag 447  Q
    ||||| ||| |||||| |||||||||||||||||||||||||| |||||||| ||||||    
T  23450812 cttaagcatactctctcaacctcattataatcattaacaacttccattcctaccccaag 23450870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 390 - 447
Target Start/End: Original strand, 24495924 - 24495982
Alignment:
Q  390 cttaatcatcctctctgaacctcattataatcattaacaactt-cattcctatcccaag 447  Q
    ||||| ||| |||||| |||||||||||||||||||||||||| |||||||| ||||||    
T  24495924 cttaagcatactctctcaacctcattataatcattaacaacttccattcctaccccaag 24495982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 390 - 447
Target Start/End: Original strand, 34301890 - 34301948
Alignment:
Q  390 cttaatcatcctctctgaacctcattataatcattaacaactt-cattcctatcccaag 447  Q
    ||||| ||| |||||| |||||||||||||||||||||||||| |||||||| ||||||    
T  34301890 cttaagcatactctctcaacctcattataatcattaacaacttccattcctaccccaag 34301948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 334
Target Start/End: Original strand, 19139966 - 19140013
Alignment:
Q  287 ataattatcaaatacaaccattacaacttcatatcaacaactttcaca 334  Q
    ||||| ||| |||| |||||||||||||||||||||||| ||||||||    
T  19139966 ataatcatccaatataaccattacaacttcatatcaacatctttcaca 19140013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 185
Target Start/End: Complemental strand, 21415421 - 21415364
Alignment:
Q  129 aacaacttaacaacttagacatctctt-atgactccaataatttgggccaacatctta 185  Q
    |||| |||||| ||||||||||||||| ||||||||||||| ||||  ||||||||||    
T  21415421 aacatcttaacgacttagacatctctttatgactccaataacttggatcaacatctta 21415364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 161; Significance: 1e-85; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 111 - 374
Target Start/End: Complemental strand, 28194807 - 28194544
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||| |||||    
T  28194807 caatggactcaacatctaaacaacttaacaacttagacatctcttatgactccaataatttagaccaacatcttataacttaaacaacttaaaccaacat 28194708  T
Q  211 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccatta 309  Q
    |||||||||||||||||||||||||||| | | ||||||||||| |||||||||||| ||||| || ||| | ||||||||| |||||||||||||||||    
T  28194707 tagcatcttaatgatattaatacatcacctcagcaaggcaacaccatcaaataatttacagcaggttatcatcaacaataatcatcaaatacaaccatta 28194608  T
Q  310 caacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatca 374  Q
    |||||||||||||||| |||||||| |||||  || || ||||| |||||||||||  |||||||    
T  28194607 caacttcatatcaacatctttcacaatatataaatattctcaca-ttaatcatcaaagtaaatca 28194544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 117 - 340
Target Start/End: Original strand, 43697143 - 43697366
Alignment:
Q  117 actcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcat 216  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||| ||| |||||||||||    
T  43697143 actcaacatcttaacaacttaaaaacttagacatcacttatgactccaataatttggaccaacatcttataacttaaacaactt-aaccaacattagcat 43697241  T
Q  217 cttaatgatattaatacatcacat-tacaaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaactt 315  Q
    ||||||||||||||||||||||||  |||||| ||||| |||||||||||| |||||||||||| | ||||||||| |||||||| ||||||||||||||    
T  43697242 cttaatgatattaatacatcacatcaacaaggtaacaccatcaaataatttacagcaagtcatcatcaacaataatcatcaaataaaaccattacaactt 43697341  T
Q  316 catatcaacaactttcacattatat 340  Q
    ||||||| || |||||||| |||||    
T  43697342 catatcagcatctttcacaatatat 43697366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 111 - 339
Target Start/End: Complemental strand, 46382913 - 46382684
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||| ||| ||||||||| |||||    
T  46382913 caatagactcaatatcttaacaacttaacaacttagacatctcttatgactccaataatttggatcaacatcttacaacttaaaaaacttaaaccaacat 46382814  T
Q  211 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccatta 309  Q
    ||||||||||||||||||||||||| |||| | || |||||||| |||||||||||| |||||||||| | | ||||||||| ||| |||| ||||||||    
T  46382813 tagcatcttaatgatattaatacattacatcagcatggcaacaccatcaaataatttacagcaagtcaacatcaacaataatcatctaataaaaccatta 46382714  T
Q  310 caacttcatatcaacaactttcacattata 339  Q
    |||||||||||||||| |||||||| ||||    
T  46382713 caacttcatatcaacatctttcacaatata 46382684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 129 - 374
Target Start/End: Original strand, 43542891 - 43543136
Alignment:
Q  129 aacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatatt 228  Q
    |||| ||||||||||||||||||||||||||||||||||||||||  |||||||||| |||| ||||||||||||| |||||||||||||||||||||||    
T  43542891 aacatcttaacaacttagacatctcttatgactccaataatttggttcaacatcttacaacttaaacaacttaaaccaacattagcatcttaatgatatt 43542990  T
Q  229 aatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaac 327  Q
    ||||||| |||| | ||||||||||| |||||||||||| |||||||||| | | ||||||||| ||| ||||||| ||||||||||||||||||||| |    
T  43542991 aatacatgacatcagcaaggcaacaccatcaaataatttacagcaagtcaacatcaacaataatcatctaatacaatcattacaacttcatatcaacatc 43543090  T
Q  328 tttcacattatattgatcttttcacatttaatcatcaacataaatca 374  Q
    ||||||| |||||  || || ||||| |||||||||||  |||||||    
T  43543091 tttcacaatatataaatattctcaca-ttaatcatcaaagtaaatca 43543136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 310 - 424
Target Start/End: Original strand, 43697482 - 43697596
Alignment:
Q  310 caacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatcttaatcatcctctctgaac 409  Q
    ||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  43697482 caactccatatcaacaactttcacactatatagatcttttcacatttaatcatcaacttaaatcaacaatattaaatcatcttaatcatcctctctgaac 43697581  T
Q  410 ctcattataatcatt 424  Q
    ||||||| |||||||    
T  43697582 ctcattaaaatcatt 43697596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 310 - 426
Target Start/End: Complemental strand, 28194461 - 28194345
Alignment:
Q  310 caacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatcttaatcatcctctctgaac 409  Q
    ||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||    
T  28194461 caactacatatcaacaactttcacattatatagattttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcctaatcatcttctctgaac 28194362  T
Q  410 ctcattataatcattaa 426  Q
    ||||||| |||||||||    
T  28194361 ctcattagaatcattaa 28194345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 111 - 240
Target Start/End: Complemental strand, 41305945 - 41305825
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||         ||||||||||| |||||    
T  41305945 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttggatcaacatctt---------acaacttaaaccaacat 41305855  T
Q  211 tagcatcttaatgatattaatacatcacat 240  Q
    ||||||||||||||||||||||||||||||    
T  41305854 tagcatcttaatgatattaatacatcacat 41305825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 129 - 334
Target Start/End: Complemental strand, 35982027 - 35981822
Alignment:
Q  129 aacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatatt 228  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||  |||||||||| |||| |||||||||| || |||||||| ||||| ||||||||    
T  35982027 aacatcttaacaacttaggcatctcttatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacattag-atcttcatgatatt 35981929  T
Q  229 aatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaac 327  Q
    ||||| |||||    ||||||||||| || ||||||| | || ||||||| | | |||||||||  ||||||||||||||||| ||||||||| | || |    
T  35981928 aatacgtcacaaccgcaaggcaacaccattaaataatatgcaacaagtcaacatcaacaataatcgtcaaatacaaccattacgacttcatataagcatc 35981829  T
Q  328 tttcaca 334  Q
    |||||||    
T  35981828 tttcaca 35981822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 268 - 447
Target Start/End: Complemental strand, 12328673 - 12328495
Alignment:
Q  268 cagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaaca 367  Q
    |||||||||| | | || |||||| |||| ||| ||| |||||| ||||||||||||  |||||||| |||||  || |||||| |||||||||||||      
T  12328673 cagcaagtcaccatcaataataatcatcatatataacaattacatcttcatatcaacgtctttcacaatatataaatattttcaaatttaatcatcaaag 12328574  T
Q  368 taaatcaacaatattaaatcatcttaatcatcctctctgaacctcattataatcattaacaacttcattcctatcccaag 447  Q
    ||||||| ||||||| |||||||||| |||||||||| | |||||||||||||| ||||||||||||||| || ||||||    
T  12328573 taaatcatcaatatt-aatcatcttattcatcctctcagcacctcattataatctttaacaacttcattcataccccaag 12328495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 193 - 334
Target Start/End: Original strand, 20636694 - 20636835
Alignment:
Q  193 aacaacttaaacaaacattagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataat 291  Q
    ||||||||| || |||||||| ||||| |||||||||||||||||||  | || |||||||| || ||||||| | |||||||||| | | |||||||||    
T  20636694 aacaacttagaccaacattag-atcttcatgatattaatacatcacaacaacagggcaacaccattaaataatatgcagcaagtcaacatcaacaataat 20636792  T
Q  292 tatcaaatacaaccattacaacttcatatcaacaactttcaca 334  Q
      ||||||||||||||||| ||||||||| |||| ||||||||    
T  20636793 cgtcaaatacaaccattacgacttcatataaacatctttcaca 20636835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 111 - 384
Target Start/End: Complemental strand, 51274552 - 51274290
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    |||| |||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||  |||||||||| ||||  ||||||||| |           
T  51274552 caatagactcaacatctta-cgacttaacaacttagacatctcatatgactccaataatttggatcaacatcttacaact-taacaacttaga------- 51274462  T
Q  211 tagcatcttaatgatattaatacatcacattacaaggcaacacaatca---aataatttccagcaagtcatctttaacaataattatcaaatacaaccat 307  Q
       |||||||||| ||||||| |||||||  ||||   |||| || ||   ||  || | || ||||||| | | || |||||| |||  ||| ||| ||    
T  51274461 ---catcttaatggtattaattcatcaca--acaacaaaacaaaaacatttaaacatatgcatcaagtcaccatcaataataatcatcttatataacaat 51274367  T
Q  308 tacaacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaa 384  Q
    |||||||||||||||||| |||||||| |||||  || ||||||||||||||||||||  ||||||| |||||||||    
T  51274366 tacaacttcatatcaacatctttcacaatatataaatattttcacatttaatcatcaaagtaaatcatcaatattaa 51274290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 370 - 447
Target Start/End: Original strand, 51326966 - 51327042
Alignment:
Q  370 aatcaacaatattaaatcatcttaatcatcctctctgaacctcattataatcattaacaacttcattcctatcccaag 447  Q
    ||||| ||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||| |||| ||||||    
T  51326966 aatcatcaatattaa-tcatcttattcatcctctttgaacctcattataatcattaacaacttcatccctaccccaag 51327042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 113 - 340
Target Start/End: Original strand, 48300902 - 48301117
Alignment:
Q  113 atggactcaacatcttaacaacttaacaa-cttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 211  Q
    |||||||||| |||||| |||||||| || |||| ||| ||| |||||||||||||||||||  |||||||||| |||| |||||||||| || ||||||    
T  48300902 atggactcaaaatctta-caacttaaaaaacttaaacaactcatatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacatt 48301000  T
Q  212 agcatcttaatgatattaatacatcacattacaaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattaca 311  Q
    | |||| ||||          ||  |||  ||||| |||||| || ||||||| | |||||||||| | | ||||||||| |||  ||  ||||||||||    
T  48301001 aacatcctaat----------cacgaca--acaagacaacaccattaaataatatgcagcaagtcaacatcaacaataataatctcatgtaaccattaca 48301088  T
Q  312 acttcatatcaacaactttcacattatat 340  Q
    |||||||||||||| |||||||| |||||    
T  48301089 acttcatatcaacatctttcacaatatat 48301117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 117 - 190
Target Start/End: Complemental strand, 20634583 - 20634510
Alignment:
Q  117 actcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataact 190  Q
    ||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| ||||    
T  20634583 actcaacatctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaact 20634510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 306 - 394
Target Start/End: Original strand, 8885469 - 8885556
Alignment:
Q  306 attacaacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatcttaa 394  Q
    ||||||| |||||||||||  |||||||| |||||  || ||||||||||||||||||||  ||||||| ||||||| |||||||||||    
T  8885469 attacaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaaagtaaatcatcaatatt-aatcatcttaa 8885556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 243 - 334
Target Start/End: Complemental strand, 41227599 - 41227508
Alignment:
Q  243 caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcaca 334  Q
    ||||||| |||||| ||||| | | |||||||||| | ||||||||||| ||| |||| |||||||| |||||||||| |||| ||||||||    
T  41227599 caaggcagcacaattaaatattatgcagcaagtcaacattaacaataatcatccaatataaccattaaaacttcatataaacatctttcaca 41227508  T

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Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 41227683 - 41227630
Alignment:
Q  137 aacaacttagacatctcttatgactccaataatttgggccaacatcttataact 190  Q
    ||||||||||||||||| |||||||||||||||||||  |||||||||| ||||    
T  41227683 aacaacttagacatctcatatgactccaataatttggatcaacatcttacaact 41227630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 210
Target Start/End: Original strand, 20587769 - 20587866
Alignment:
Q  113 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    ||||||||||| ||||| |||||||| |||||||||||| |  ||||||||| |||||||||  |||||||||| | || |||||||||| || |||||    
T  20587769 atggactcaacgtctta-caacttaaacaacttagacatttaatatgactcctataatttggatcaacatcttacagcttaaacaacttagaccaacat 20587866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 210
Target Start/End: Original strand, 20592307 - 20592404
Alignment:
Q  113 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    ||||||||||| ||||| |||||||| |||||||||||| |  ||||||||| |||||||||  |||||||||| | || |||||||||| || |||||    
T  20592307 atggactcaacgtctta-caacttaaacaacttagacatttaatatgactcctataatttggatcaacatcttacagcttaaacaacttagaccaacat 20592404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 130 - 190
Target Start/End: Complemental strand, 11809482 - 11809421
Alignment:
Q  130 acaactta-acaacttagacatctcttatgactccaataatttgggccaacatcttataact 190  Q
    |||||||| |||||||| ||||||| |||||||||||||||||||  |||||||||| ||||    
T  11809482 acaacttagacaacttacacatctcatatgactccaataatttggatcaacatcttacaact 11809421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 111 - 148
Target Start/End: Original strand, 20636668 - 20636705
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagac 148  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  20636668 caatggactcaacatcttaacgacttaacaacttagac 20636705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 130 - 190
Target Start/End: Original strand, 23073052 - 23073113
Alignment:
Q  130 acaactta-acaacttagacatctcttatgactccaataatttgggccaacatcttataact 190  Q
    |||||||| |||||||| ||||||| |||||||||||||||||||  |||||||||| ||||    
T  23073052 acaacttagacaacttaaacatctcatatgactccaataatttggatcaacatcttagaact 23073113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 160; Significance: 4e-85; HSPs: 2)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 111 - 365
Target Start/End: Original strand, 2808 - 3062
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||| ||||||||| |||||    
T  2808 caatgcactcaacatcttaaaaacttaacaacttagacatctcttatgactccaataatttagaccaacatcttataacttaaaaaacttaaaccaacat 2907  T
Q  211 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccatta 309  Q
    |||||||||||||||||||||||||||||| | ||||||||||| |||| ||||||| |||||||||||| | ||||||||| |||||||||||||||||    
T  2908 tagcatcttaatgatattaatacatcacatcagcaaggcaacaccatcatataatttacagcaagtcatcatcaacaataatcatcaaatacaaccatta 3007  T
Q  310 caacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaa 365  Q
    |||||||||||||||| |||||||| |||||  || || ||||| |||||||||||    
T  3008 caacttcatatcaacatctttcacaatatataaatattctcaca-ttaatcatcaa 3062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 335 - 426
Target Start/End: Original strand, 3065 - 3156
Alignment:
Q  335 ttatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatcttaatcatcctctctgaacctcattataatcattaa 426  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  3065 ttatatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcttaatcatcctctctgaacctcgttataatcattaa 3156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 160; Significance: 4e-85; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 113 - 434
Target Start/End: Original strand, 6576252 - 6576573
Alignment:
Q  113 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 211  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| |||| |||||||||| || ||||||    
T  6576252 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacatt 6576350  T
Q  212 agcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattac 310  Q
    |||||||||||||||||| ||||||||| || ||||||| ||| || ||||||| | |||||||||| | | ||||||||| |||||||| |||||||||    
T  6576351 agcatcttaatgatattattacatcacaatagcaaggcagcaccattaaataatatgcagcaagtcaacatcaacaataatcatcaaatataaccattac 6576450  T
Q  311 aacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatcttaatcatcctctctgaacc 410  Q
    ||||||||||||||| |||||||| |||||  || ||||||| ||||||||||||| |||||| |||| ||| |||||||||| |||| ||||| ||||     
T  6576451 aacttcatatcaacatctttcacaatatataaattttttcacttttaatcatcaacttaaatccacaacatt-aatcatcttattcatactctccgaact 6576549  T
Q  411 tcattataatcattaacaacttca 434  Q
    ||||||||||||||||||||||||    
T  6576550 tcattataatcattaacaacttca 6576573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 306 - 440
Target Start/End: Complemental strand, 2524509 - 2524376
Alignment:
Q  306 attacaacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatcttaatcatcctctct 405  Q
    ||||||| || ||||||||  |||||||| |||||  || ||||||||||||||||||||  ||||||| ||||||||| |||||||| |||| ||||||    
T  2524509 attacaatttgatatcaacgtctttcacaatatataaatattttcacatttaatcatcaaagtaaatcatcaatattaa-tcatcttattcatactctct 2524411  T
Q  406 gaacctcattataatcattaacaacttcattccta 440  Q
    ||||||||||||||||||||||||||||| |||||    
T  2524410 gaacctcattataatcattaacaacttcactccta 2524376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 113 - 334
Target Start/End: Complemental strand, 24781853 - 24781644
Alignment:
Q  113 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 211  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| |||| |||||||||| || ||||||    
T  24781853 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacatt 24781755  T
Q  212 agcatcttaatgatattaatacatcacattacaaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattaca 311  Q
    |||||| ||||          ||  ||||  ||||||| ||  || ||||||| | |||||||||| | | ||||||||| ||| |||| ||||||||||    
T  24781754 agcatcctaat----------cacgacat--caaggcagcatcattaaataatatgcagcaagtcaacatcaacaataatcatccaatataaccattaca 24781667  T
Q  312 acttcatatcaacaactttcaca 334  Q
    |||||||||||||||||||||||    
T  24781666 acttcatatcaacaactttcaca 24781644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 115 - 405
Target Start/End: Complemental strand, 24865730 - 24865452
Alignment:
Q  115 ggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagc 214  Q
    |||||| |||||||| | ||||||||||||||||||||| ||| |||||||||||||||  |||||||||| |||| || ||||||| |||             
T  24865730 ggactcgacatctta-cgacttaacaacttagacatctcatataactccaataatttggatcaacatcttacaacttaa-caacttagaca--------- 24865642  T
Q  215 atcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaac 313  Q
     |||||||| ||||||| ||||||| || |||| |||||  ||  ||  || | || ||||||| | | || |||||| |||  ||| ||| ||||||||    
T  24865641 -tcttaatggtattaattcatcacaatagcaagacaacatcatttaaacatatgcatcaagtcaccatcaataataatcatcttatataacaattacaac 24865543  T
Q  314 ttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatcttaatcatcctctct 405  Q
    |||||||||||| |||||||| |||||  || ||||||||||||||||||||  ||||||| ||||||| |||||||||| |||||||||||    
T  24865542 ttcatatcaacatctttcacaatatataaatattttcacatttaatcatcaaagtaaatcatcaatatt-aatcatcttattcatcctctct 24865452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 138 - 372
Target Start/End: Original strand, 24436108 - 24436328
Alignment:
Q  138 acaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatattaatacatca 237  Q
    |||||||||||||||| |||||||||||||||||||  |||||||||| |||| |||||||||| || |||||||||||| ||     ||||  |||       
T  24436108 acaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacattagcatccta-----attacgaca--- 24436199  T
Q  238 cattacaaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacatta 337  Q
         ||||||| ||| || ||||||| | |||||||||| | | ||||| ||| ||| |||  ||||||||||| |||||||||||| |||||||| ||    
T  24436200 ----gcaaggcagcaccattaaataatatgcagcaagtcaacatcaacaa-aatcatccaatgtaaccattacaatttcatatcaacatctttcacaata 24436294  T
Q  338 tattgatcttttcacatttaatcatcaacataaat 372  Q
    |||  ||| |||||||||||||||||||| |||||    
T  24436295 tataaatc-tttcacatttaatcatcaacttaaat 24436328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 113 - 218
Target Start/End: Original strand, 22689719 - 22689824
Alignment:
Q  113 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 211  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||| ||||||||||  |||||||||| |||| |||||||||| || ||||||    
T  22689719 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactcaaataatttggatcaacatcttacaacttaaacaacttagaccaacatt 22689817  T
Q  212 agcatct 218  Q
    |||||||    
T  22689818 agcatct 22689824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 113 - 218
Target Start/End: Original strand, 22694315 - 22694420
Alignment:
Q  113 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 211  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||| ||||||||||  |||||||||| |||| |||||||||| || ||||||    
T  22694315 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactcaaataatttggatcaacatcttacaacttaaacaacttagaccaacatt 22694413  T
Q  212 agcatct 218  Q
    |||||||    
T  22694414 agcatct 22694420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 111 - 393
Target Start/End: Original strand, 22500877 - 22501147
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    |||| |||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||  ||| |||||| |||| || ||||||| |||         
T  22500877 caatagactcaacatctta-cgacttaacaacttagacatctcatatgactccaataatttggatcaatatcttacaacttaa-caacttagaca----- 22500969  T
Q  211 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccatta 309  Q
         |||||||| ||||||| ||||||| || |||| || ||  ||  ||  || | |||||||| | | | || | |||| |||  ||| ||| ||||    
T  22500970 -----tcttaatggtattaattcatcacaatagcaagacagcatcatttaaacatatgcagcaagttaccatcaatattaatcatcttatataacaatta 22501064  T
Q  310 caacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatctta 393  Q
    |||||||||||||||  ||||||||||||||  || ||||||||||||||||||||  ||||||| ||||||| ||||||||||    
T  22501065 caacttcatatcaacgtctttcacattatataaatattttcacatttaatcatcaaagtaaatcatcaatatt-aatcatctta 22501147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 111 - 393
Target Start/End: Original strand, 22508811 - 22509081
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    |||| |||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||  ||| |||||| |||| || ||||||| |||         
T  22508811 caatagactcaacatctta-cgacttaacaacttagacatctcatatgactccaataatttggatcaatatcttacaacttaa-caacttagaca----- 22508903  T
Q  211 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccatta 309  Q
         |||||||| ||||||| ||||||| || |||| || ||  ||  ||  || | |||||||| | | | || | |||| |||  ||| ||| ||||    
T  22508904 -----tcttaatggtattaattcatcacaatagcaagacagcatcatttaaacatatgcagcaagttaccatcaatattaatcatcttatataacaatta 22508998  T
Q  310 caacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatctta 393  Q
    |||||||||||||||  ||||||||||||||  || ||||||||||||||||||||  ||||||| ||||||| ||||||||||    
T  22508999 caacttcatatcaacgtctttcacattatataaatattttcacatttaatcatcaaagtaaatcatcaatatt-aatcatctta 22509081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 7672335 - 7672240
Alignment:
Q  309 acaacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatcttaatcatcctctct 405  Q
    ||||||||||||||||  |||||||| |||||  || ||||||||||||||||||||  ||||||| ||||||| |||||||||| |||||||||||    
T  7672335 acaacttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaaagtaaatcatcaatatt-aatcatcttattcatcctctct 7672240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 113 - 222
Target Start/End: Complemental strand, 5032337 - 5032228
Alignment:
Q  113 atggactcaacatcttaacaacttaac-aacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 211  Q
    ||||||||||| ||||| ||||||||  |||||| ||| ||| |||||||||||||||||||  |||||||||| |||| |||||||||| || ||||||    
T  5032337 atggactcaacgtctta-caacttaaataacttaaacacctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacatt 5032239  T
Q  212 agcatcttaat 222  Q
    |||||| ||||    
T  5032238 agcatcctaat 5032228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 243 - 340
Target Start/End: Original strand, 24883610 - 24883707
Alignment:
Q  243 caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacattatat 340  Q
    ||||||| ||| || ||||||| | |||||||||| | | ||||||||| ||| |||| |||||||||||||||||||||||| |||||||| |||||    
T  24883610 caaggcagcaccattaaataatatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacatctttcacaatatat 24883707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 190
Target Start/End: Original strand, 24883501 - 24883578
Alignment:
Q  113 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataact 190  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| ||||    
T  24883501 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaact 24883578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 113 - 201
Target Start/End: Original strand, 9974964 - 9975052
Alignment:
Q  113 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaactta 201  Q
    ||||||||||| ||||| |||||||| ||||||||||||||  ||||||| |||||||||||  |||||||||| |||| ||||||||||    
T  9974964 atggactcaacgtctta-caacttaaacaacttagacatcttatatgacttcaataatttggatcaacatcttacaacttaaacaactta 9975052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 119 - 190
Target Start/End: Original strand, 9975026 - 9975097
Alignment:
Q  119 tcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataact 190  Q
    ||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| ||||    
T  9975026 tcaacatctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaact 9975097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 111 - 190
Target Start/End: Original strand, 20915143 - 20915221
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataact 190  Q
    ||||||| ||||||||||| | ||||||||||||||||||||| ||||||||||||| ||| |  |||||||||| ||||    
T  20915143 caatggattcaacatctta-cgacttaacaacttagacatctcatatgactccaatactttagaacaacatcttacaact 20915221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 138 - 239
Target Start/End: Original strand, 21367910 - 21368010
Alignment:
Q  138 acaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatattaatacatca 237  Q
    |||||||||||| ||| |||||||||||||||||||  |||||||||| ||||   ||  |||| || ||| || |||||||||||||||||||| ||||    
T  21367910 acaacttagacaactcatatgactccaataatttggaacaacatcttacaact-ttacttcttagaccaacgtttgcatcttaatgatattaataaatca 21368008  T
Q  238 ca 239  Q
    ||    
T  21368009 ca 21368010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 334
Target Start/End: Complemental strand, 5032219 - 5032128
Alignment:
Q  243 caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcaca 334  Q
    ||||||||||  || ||||||| | |||||||||| | | ||||||||| ||| |||| |||||||| |||||||||||||||  |||||||    
T  5032219 caaggcaacaacattaaataatatgcagcaagtcaacatcaacaataatcatccaatataaccattataacttcatatcaacatttttcaca 5032128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 153; Significance: 6e-81; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 111 - 374
Target Start/End: Original strand, 85011 - 85274
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||| ||||||||||||| |||||    
T  85011 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttggatcaacatcttaaaacttaaacaacttaaaccaacat 85110  T
Q  211 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccatta 309  Q
    |||||| |||||||||||||||||||| || | ||||||||||| ||||| |||||| |||||||||| | | ||||||||| |||||||||||| ||||    
T  85111 tagcatattaatgatattaatacatcaaatcagcaaggcaacaccatcaattaatttgcagcaagtcaacatcaacaataatcatcaaatacaactatta 85210  T
Q  310 caacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatca 374  Q
    |||||||||||||||| |||||||| |||||  || || ||||| |||||||||||  |||||||    
T  85211 caacttcatatcaacatctttcacaatatataaatattctcaca-ttaatcatcaaagtaaatca 85274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 130; Significance: 3e-67; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 129 - 365
Target Start/End: Complemental strand, 29915413 - 29915177
Alignment:
Q  129 aacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatatt 228  Q
    |||| ||||||||||||||||||||||||||||||||||||||||  |||||||||| |||| |||||||||||| ||||||||||||||||||||||||    
T  29915413 aacatcttaacaacttagacatctcttatgactccaataatttggatcaacatcttacaacttaaacaacttaaataaacattagcatcttaatgatatt 29915314  T
Q  229 aatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaac 327  Q
    |||||||||||| | ||||||||| | ||  |||||||| |||||||||| | | ||||||||| ||| ||||||||||||||||||||||||||||| |    
T  29915313 aatacatcacatcagcaaggcaacgccattcaataatttacagcaagtcaacatcaacaataatcatctaatacaaccattacaacttcatatcaacatc 29915214  T
Q  328 tttcacattatattgatcttttcacatttaatcatcaa 365  Q
    ||||||| |||||  || || ||||| |||||||||||    
T  29915213 tttcacaatatataaatattctcaca-ttaatcatcaa 29915177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 111 - 374
Target Start/End: Complemental strand, 5889517 - 5889270
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |                |||||    
T  5889517 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttggaccaacatcttaaatc----------------aacat 5889434  T
Q  211 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccatta 309  Q
    |||||||||||||||||||||||||||||| | ||||||||||| |||||||||||| |||||||||||| | ||||||||| |||||||||||||||||    
T  5889433 tagcatcttaatgatattaatacatcacatcagcaaggcaacaccatcaaataatttacagcaagtcatcatcaacaataatcatcaaatacaaccatta 5889334  T
Q  310 caacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatca 374  Q
    ||||||||||||| || |||||||| |||||  || || ||||| |||||||||||  |||||||    
T  5889333 caacttcatatcagcatctttcacaatatataaatattctcaca-ttaatcatcaaagtaaatca 5889270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 111 - 451
Target Start/End: Complemental strand, 12122485 - 12122157
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||  |||||||||| |||| || |||||||||||         
T  12122485 caatggactcaacatctta-caacttaacaacttagacatctcatatgactcaaataatttggatcaacatcttacaacttaa-caacttaaaca----- 12122393  T
Q  211 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccatta 309  Q
         ||| |||| ||||||| |||||||  | |||| || ||  ||  ||  || | | |||||||| | | || |||||| |||| ||| ||| ||||    
T  12122392 -----tctcaatggtattaattcatcacaacagcaagacatcatcatttaaacatatgccgcaagtcaccatcaataataatcatcatatataacaatta 12122298  T
Q  310 caacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatcttaatcatcctctctgaac 409  Q
    |||||||||||||||  |||||||| |||||  || ||||||||||||||||||||  |||||||  |||||||| |||||||| |||||||||||||||    
T  12122297 caacttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaaagtaaatcattaatattaa-tcatcttattcatcctctctgaac 12122199  T
Q  410 ctcattataatcattaacaacttcattcctatcccaagatca 451  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  12122198 ctcattataatcattaacaacttcattcctatcccaagatca 12122157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 111 - 334
Target Start/End: Complemental strand, 21741899 - 21741667
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaaca----- 205  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||         
T  21741899 caatggactcaacatcttaacaatttaacaacttagacatctcttatgactccaataatttgggccaacatcttataacttaaacaacttaaacaactta 21741800  T
Q  206 ----aacattagcatcttaatgatattaatacatcacattac---aaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaa 298  Q
        |||||||| ||||| ||||||||||||| |||||  ||   |||||||||| || ||||||| | |||||||||| | | |||||||||  |||||    
T  21741799 aaccaacattag-atcttcatgatattaatacgtcaca--accgtaaggcaacaccattaaataatatgcagcaagtcaacatcaacaataatcgtcaaa 21741703  T
Q  299 tacaaccattacaacttcatatcaacaactttcaca 334  Q
    |||||||||||| | ||||||| | || ||||||||    
T  21741702 tacaaccattacgatttcatataagcatctttcaca 21741667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 310 - 426
Target Start/End: Complemental strand, 5889188 - 5889072
Alignment:
Q  310 caacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatcttaatcatcctctctgaac 409  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  5889188 caactacatatcaacaactttcacattatatagatcttttcacatttaatcatcaacgtaaatcaacaatattaaatcatcataatcatcctctctgaac 5889089  T
Q  410 ctcattataatcattaa 426  Q
    ||||||| |||||||||    
T  5889088 ctcattagaatcattaa 5889072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 111 - 447
Target Start/End: Complemental strand, 21558009 - 21557685
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    ||||||||||||||||| ||| ||||||||| || |||||||| |||||||||||||||||||  |||||||||| |||| || ||||||| |||         
T  21558009 caatggactcaacatct-aacgacttaacaagttggacatctcatatgactccaataatttggatcaacatcttacaacttaa-caacttagaca----- 21557917  T
Q  211 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccatta 309  Q
         |||||||| ||||||| ||||| |  | |||| |||||  ||  ||  || | ||||||||||   | || |||||| |||| ||| ||| ||||    
T  21557916 -----tcttaatggtattaattcatcataacagcaagacaacatcatttaaacatatgcagcaagtcactatcaataataatcatcatatataacaatta 21557822  T
Q  310 caacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatcttaatcatcctctctgaac 409  Q
    |||||||||||||||  |||||||| |||||  || ||||||||||||||||||||  |||| || ||||||||| |||||||| |||||||||||||||    
T  21557821 caacttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaaactaaaacatcaatattaa-tcatcttattcatcctctctgaac 21557723  T
Q  410 ctcattataatcattaacaacttcattcctatcccaag 447  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  21557722 ctcattataatcattaacaaattcattcctaccccaag 21557685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 194 - 447
Target Start/End: Original strand, 36460130 - 36460382
Alignment:
Q  194 acaacttaaacaaacattagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataatt 292  Q
    |||||||| || |||||||| ||||| ||||||||||||  |||||    |||| |||||| || ||||||| | |||||||||| | |||| ||||||     
T  36460130 acaacttataccaacattag-atcttcatgatattaatatgtcacaaccgcaagacaacaccattaaataatatgcagcaagtcaacattaataataatc 36460228  T
Q  293 atcaaatacaaccattacaacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatctt 392  Q
    |||| ||| ||| ||||||| |||||||||||  |||||||| |||||  || ||||||||||||||||||||  ||||||| || |||| |||||||||    
T  36460229 atcatatataacaattacaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaaagtaaatcatcattatt-aatcatctt 36460327  T
Q  393 aatcatcctctctgaacctcattataatcattaacaacttcattcctatcccaag 447  Q
      |||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  36460328 gttcatcctctctgaacctcattataatcattaacaacttcattccaaccccaag 36460382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 111 - 440
Target Start/End: Complemental strand, 21555344 - 21555026
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    ||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||  |||||||||| |||| || ||||||| |||         
T  21555344 caatggactcaacatctta-cgacttaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaa-caacttagaca----- 21555252  T
Q  211 tagcatcttaa-tgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccatt 308  Q
         |||||| || ||||||| |||||||  | |||| |||||  ||  ||  || | |||||||||| | | || |||||| |||| ||| ||| |||    
T  21555251 -----tcttaaatggtattaattcatcacaacagcaagacaacatcatttaaacatatgcagcaagtcaccatcaataataatcatcatatataacaatt 21555157  T
Q  309 acaacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatcttaatcatcctctctgaa 408  Q
    ||||||| || |||||  |||||||| |||||  || ||||||||||||||||||||  |||| || ||||||||| |||||||| ||||||||||||||    
T  21555156 acaactttatgtcaacgtctttcacaatatataaatattttcacatttaatcatcaaactaaaacatcaatattaa-tcatcttattcatcctctctgaa 21555058  T
Q  409 cctcattataatcattaacaacttcattccta 440  Q
    ||||||||| ||||||| ||| ||||||||||    
T  21555057 cctcattatcatcattagcaaattcattccta 21555026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 286 - 445
Target Start/End: Original strand, 30615808 - 30615965
Alignment:
Q  286 aataattatcaaatacaaccattacaacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaa 385  Q
    |||||| ||||| || ||| |||||||||||||||||||  |||||||| |||||  || ||||||||||||||||| ||  ||||| | |||||||||     
T  30615808 aataatcatcaattataacaattacaacttcatatcaacgtctttcacaatatata-atattttcacatttaatcataaaagtaaattatcaatattaa- 30615905  T
Q  386 tcatcttaatcatcctctctgaacctcattataatcattaacaacttcattcctatccca 445  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  30615906 tcatcttattcatcctctctgaacctcattataatccttaacaacttcattcctacccca 30615965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 306 - 423
Target Start/End: Original strand, 31455765 - 31455881
Alignment:
Q  306 attacaacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatcttaatcatcctctct 405  Q
    |||||||||||||||||||   ||||||| |||||  || ||||||||||||||||||||  |||| || ||||||| |||||||||| ||||||||||     
T  31455765 attacaacttcatatcaacgtttttcacaatatataaatattttcacatttaatcatcaaagtaaaacatcaatatt-aatcatcttattcatcctctcc 31455863  T
Q  406 gaacctcattataatcat 423  Q
    ||||||||||||||||||    
T  31455864 gaacctcattataatcat 31455881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 254 - 340
Target Start/End: Complemental strand, 21871775 - 21871689
Alignment:
Q  254 aatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacattatat 340  Q
    ||||||||||||| |||||||||| | | ||||||||| ||||||||||| |||||||||||||||||| || | |||||| |||||    
T  21871775 aatcaaataatttgcagcaagtcaacatcaacaataatcatcaaatacaatcattacaacttcatatcatcatcattcacaatatat 21871689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 254 - 340
Target Start/End: Complemental strand, 21876055 - 21875969
Alignment:
Q  254 aatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacattatat 340  Q
    ||||||||||||| |||||||||| | | ||||||||| ||||||||||| |||||||||||||||||| || | |||||| |||||    
T  21876055 aatcaaataatttgcagcaagtcaacatcaacaataatcatcaaatacaatcattacaacttcatatcatcatcattcacaatatat 21875969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 288 - 394
Target Start/End: Original strand, 24212422 - 24212527
Alignment:
Q  288 taattatcaaatacaaccattacaacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatc 387  Q
    |||| |||| ||| ||| |||||||||||||||||||  |||||||| |||||  || ||||||||||||||||||||  ||||||| ||||||| ||||    
T  24212422 taatcatcatatataacaattacaacttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaaagtaaatcatcaatatt-aatc 24212520  T
Q  388 atcttaa 394  Q
    |||||||    
T  24212521 atcttaa 24212527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 117 - 190
Target Start/End: Original strand, 31454971 - 31455043
Alignment:
Q  117 actcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataact 190  Q
    ||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||  |||||||||| ||||    
T  31454971 actcaacatctta-cgacttaacaacttagacatctcatatgactccaataatttggatcaacatcttacaact 31455043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 117 - 190
Target Start/End: Original strand, 31455584 - 31455656
Alignment:
Q  117 actcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataact 190  Q
    ||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||   |||||||||| ||||    
T  31455584 actcaacatctta-cgacttaacaacttagacatctcatatgactccaataatttgtatcaacatcttacaact 31455656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 306 - 394
Target Start/End: Original strand, 35852695 - 35852782
Alignment:
Q  306 attacaacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatcttaa 394  Q
    ||||||| |||||||||||  |||||||| |||||  || ||||||||||||||||||||  ||||||| ||||||| |||||||||||    
T  35852695 attacaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaaagtaaatcatcaatatt-aatcatcttaa 35852782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 111 - 190
Target Start/End: Original strand, 17875102 - 17875180
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataact 190  Q
    ||||||||||| ||||||| | ||||||||||||||||||||  |||||||||||||||||||  ||| |||||| ||||    
T  17875102 caatggactcagcatctta-cgacttaacaacttagacatcttatatgactccaataatttggatcaatatcttacaact 17875180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 306 - 409
Target Start/End: Original strand, 31455152 - 31455254
Alignment:
Q  306 attacaacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatcttaatcatcctctct 405  Q
    |||||||||| ||||||||   ||||||| |||||  || ||||||||||||||||||||  |||| || ||||||| |||||||||| ||||||||||     
T  31455152 attacaacttaatatcaacgtttttcacaatatataaatattttcacatttaatcatcaaagtaaaacatcaatatt-aatcatcttattcatcctctcc 31455250  T
Q  406 gaac 409  Q
    ||||    
T  31455251 gaac 31455254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 135 - 190
Target Start/End: Original strand, 30615667 - 30615722
Alignment:
Q  135 ttaacaacttagacatctcttatgactccaataatttgggccaacatcttataact 190  Q
    ||||||||||||||||||| || ||||||||||||||||  |||||||||| ||||    
T  30615667 ttaacaacttagacatctcatacgactccaataatttggatcaacatcttacaact 30615722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 128; Significance: 5e-66; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 111 - 377
Target Start/End: Original strand, 362018 - 362275
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||         |||||||||| |||||    
T  362018 caatggactcaatatcttaacaacttaacagcttagacatctcttatgactccaataatttggatcaacatctta---------caacttaaaccaacat 362108  T
Q  211 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccatta 309  Q
    |||||||||||||||||||||||||||||| | ||||||||||| |||||||||||| |||||||||| | | ||||||||| ||| |||||||||||||    
T  362109 tagcatcttaatgatattaatacatcacatcagcaaggcaacaccatcaaataatttacagcaagtcaacatcaacaataatcatctaatacaaccatta 362208  T
Q  310 caacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaaca 377  Q
     ||||||||||||||  |||||||| |||||  || || ||||| |||||||||||  ||||||||||    
T  362209 taacttcatatcaacgtctttcacaatatataaatattctcaca-ttaatcatcaaagtaaatcaaca 362275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 138 - 340
Target Start/End: Complemental strand, 631095 - 630892
Alignment:
Q  138 acaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatattaatacatca 237  Q
    |||||||| ||||||| |||||||||||||| ||||| | | ||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||    
T  631095 acaacttaaacatctcatatgactccaataaattgggtcgatatcttataactcaaacgacttaaaccaacattagcatcttaatgatattaatacatca 630996  T
Q  238 catta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacatt 336  Q
    ||| | |||||||||| ||||||||||||| |||||||||| | | || |||||| ||||||||||| |||||||||||||||||| || | |||||| |    
T  630995 catcagcaaggcaacaaaatcaaataatttgcagcaagtcaacatcaataataatcatcaaatacaatcattacaacttcatatcatcatcattcacaat 630896  T
Q  337 atat 340  Q
    ||||    
T  630895 atat 630892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 138 - 340
Target Start/End: Complemental strand, 15869030 - 15868827
Alignment:
Q  138 acaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatattaatacatca 237  Q
    |||||||| ||||||| |||||||||||||| ||||||||||||||||||||| || | |||||||| ||||||||||||||||||||||||||||||||    
T  15869030 acaacttaaacatctcatatgactccaataaattgggccaacatcttataactcaagcgacttaaaccaacattagcatcttaatgatattaatacatca 15868931  T
Q  238 catta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacatt 336  Q
    ||| | ||||||||||  |||||||||||| |||||||||| | | ||||||||| |||| ||| || |||||||||||||||||| || | |||||| |    
T  15868930 catcagcaaggcaacaacatcaaataatttgcagcaagtcaacatcaacaataatcatcagatataatcattacaacttcatatcatcatcattcacaat 15868831  T
Q  337 atat 340  Q
    ||||    
T  15868830 atat 15868827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 111 - 334
Target Start/End: Original strand, 15099112 - 15099335
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||  |||||||||| |||| |||||||||| || |||||    
T  15099112 caatggactcaacattttaacaacttaacaacttagacagctcttatgactctaataatttggatcaacatcttacaacttaaacaacttagaccaacat 15099211  T
Q  211 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccatta 309  Q
    ||| ||||| ||||||||||||| |||||    ||||||||||| || ||||| | | |||||||||| | | |||||||||  ||||||||||||||||    
T  15099212 tag-atcttcatgatattaatacgtcacaaccgcaaggcaacaccattaaatagtatgcagcaagtcaacatcaacaataatcgtcaaatacaaccatta 15099310  T
Q  310 caacttcatatcaacaactttcaca 334  Q
    | ||||||||| | || ||||||||    
T  15099311 cgacttcatataagcatctttcaca 15099335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 268 - 451
Target Start/End: Original strand, 33186136 - 33186318
Alignment:
Q  268 cagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaaca 367  Q
    |||||||||| | | || |||||| |||| ||| ||| |||||||||||||||||||  |||||| | |||||  || ||||||||||||||||||||      
T  33186136 cagcaagtcaccatcaataataatcatcatatataacaattacaacttcatatcaacgtctttcataatatataaatattttcacatttaatcatcaaag 33186235  T
Q  368 taaatcaacaatattaaatcatcttaatcatcctctctgaacctcattataatcattaacaacttcattcctatcccaagatca 451  Q
    |||||||  |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  33186236 taaatcattaatattaa-tcatcttattcatcctctctgaacctcattataatcattaacaacttcattcctataccaagatca 33186318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 310 - 420
Target Start/End: Original strand, 13844648 - 13844758
Alignment:
Q  310 caacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatcttaatcatcctctctgaac 409  Q
    ||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  13844648 caactccatatcaacaactttcacattatatagatattttcacatttaatcatcaacgtaaatcaataatattaaatcatcttaatcatcctctctgaac 13844747  T
Q  410 ctcattataat 420  Q
    |||||||||||    
T  13844748 ctcattataat 13844758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 193 - 340
Target Start/End: Original strand, 13844384 - 13844532
Alignment:
Q  193 aacaacttaaacaaacattagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataat 291  Q
    |||||||||||| || |||| ||||||||||||||||||||||||||| | ||||||||||| ||||||||||||  ||||||||||| | |||||||||    
T  13844384 aacaacttaaaccaatattaacatcttaatgatattaatacatcacatcaacaaggcaacaccatcaaataatttatagcaagtcatcatcaacaataat 13844483  T
Q  292 tatcaaatacaaccattacaacttcatatcaacaactttcacattatat 340  Q
     |||||||||||||||||||||||||||||| || |||||||| |||||    
T  13844484 aatcaaatacaaccattacaacttcatatcagcatctttcacaatatat 13844532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 156 - 322
Target Start/End: Original strand, 32851194 - 32851361
Alignment:
Q  156 atgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatattaatacatcacatta-caaggcaacaca 254  Q
    ||||||||||||| ||||||| ||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| ||||||| | ||||||||||      
T  32851194 atgactccaataaattgggccgacatcttataactcaaacgacttaaaccaacattagcatcttaatgatattaatatatcacatcagcaaggcaacaac 32851293  T
Q  255 atcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatca 322  Q
    |||| ||||||| || ||||||| | | ||||||||| ||||||||||  ||||||||||||||||||    
T  32851294 atcatataatttgcaacaagtcaacatcaacaataatcatcaaatacattcattacaacttcatatca 32851361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 113 - 446
Target Start/End: Complemental strand, 35812450 - 35812131
Alignment:
Q  113 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 211  Q
    ||||| ||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  ||| |||||  |||| |||||||||| || ||||||    
T  35812450 atggagtcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaatatctttcaacttaaacaacttagaccaacatt 35812352  T
Q  212 agcatcttaatgatattaatacatcacattacaaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattaca 311  Q
    |||||| |||| | |          |||   |||| |||||  || | ||||| | |||||||||| | | ||||||||| ||| |||| ||||||||||    
T  35812351 agcatcctaatcaca----------acag--caagacaacatcattagataatatgcagcaagtcaacatcaacaataatcatccaatataaccattaca 35812264  T
Q  312 acttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatcttaatcatcctctctgaacct 411  Q
    |||||||||||||| |||||||| |||||  ||| || ||||||||||||||||| |||||| |||| ||| |||||||||| | || |||||||||| |    
T  35812263 acttcatatcaacatctttcacaatatataaatc-ttccacatttaatcatcaacttaaatccacaacatt-aatcatcttatttatactctctgaactt 35812166  T
Q  412 cattataatcattaacaacttcattcctatcccaa 446  Q
    ||||||||||||||| ||||||| ||||| |||||    
T  35812165 cattataatcattaaaaacttcactcctaccccaa 35812131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 306 - 446
Target Start/End: Original strand, 46642939 - 46643077
Alignment:
Q  306 attacaacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatcttaatcatcctctct 405  Q
    ||||||||||||||| ||||||||||||| |||||  |||||||| |||| |||||||||| | || ||||||||||||||||||||| |||||||||||    
T  46642939 attacaacttcatattaacaactttcacaatatataaatcttttcgcatt-aatcatcaactttaaacaacaatattaaatcatcttagtcatcctctct 46643037  T
Q  406 gaacctcattataatcattaacaacttcattcctatcccaa 446  Q
    ||||||||||||||||||||| ||||||| ||||| |||||    
T  46643038 gaacctcattataatcattaa-aacttcagtcctaccccaa 46643077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 111 - 196
Target Start/End: Complemental strand, 15869104 - 15869019
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaaca 196  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||| |||||    
T  15869104 caatggactcaacatcctaacaacttaacaacttagacatctcttatgactccaataatttggatcaacatcttacaacttaaaca 15869019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 193 - 374
Target Start/End: Original strand, 46642679 - 46642860
Alignment:
Q  193 aacaacttaaacaaacattagcatcttaatgatattaatacatcac-attacaaggcaacacaatcaaataatttccagcaagtcatctttaacaataat 291  Q
    ||||||||| ||||||||||||| |||||||||||||||||| ||| |   ||||||||||| || || |||| | ||||| |||| | | |||||||||    
T  46642679 aacaacttagacaaacattagcaccttaatgatattaatacaccacgacggcaaggcaacactattaactaatatgcagcacgtcaacatcaacaataat 46642778  T
Q  292 tatcaaatacaaccattacaacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatca 374  Q
     |||||||| |||||||||||||||||||||||  |||||||| | |||  ||||| ||||| |||||||||||  |||||||    
T  46642779 catcaaatataaccattacaacttcatatcaacgtctttcacagtttataaatcttctcaca-ttaatcatcaaattaaatca 46642860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 243 - 384
Target Start/End: Original strand, 9923306 - 9923446
Alignment:
Q  243 caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacattatattg 342  Q
    ||||||| ||| || ||||||| | |||||||||| | | ||||||||| ||| |||| |||||||||||||||||||||||| |||||||| |||||      
T  9923306 caaggcagcaccattaaataatatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacatctttcacaatatataa 9923405  T
Q  343 atcttttcacatttaatcatcaacataaatcaacaatattaa 384  Q
    ||| |||||||||||||||||||| |||||| |||| |||||    
T  9923406 atc-tttcacatttaatcatcaacttaaatccacaacattaa 9923446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 111 - 195
Target Start/End: Original strand, 19857345 - 19857429
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaac 195  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||| |||| ||||    
T  19857345 caatggcctcaacatcttaactacttaacaacttagacatctcttatgactccaataatttggatcaacatcttacaacttaaac 19857429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 32851109 - 32851183
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatctta 185  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  32851109 caatggactcaacatcctaacaacctaacaacttagacatctcttatgactccaataatttggatcaacatctta 32851183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 268 - 384
Target Start/End: Complemental strand, 11479528 - 11479413
Alignment:
Q  268 cagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaaca 367  Q
    |||||||||| | | ||||||||| ||| |||| |||||||||||||||||||||||| |||||||| |||||  ||| ||||||||||||||||||||     
T  11479528 cagcaagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacatctttcacaatatataaatc-tttcacatttaatcatcaact 11479430  T
Q  368 taaatcaacaatattaa 384  Q
    |||||| |||| |||||    
T  11479429 taaatccacaacattaa 11479413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 113 - 222
Target Start/End: Original strand, 19609363 - 19609472
Alignment:
Q  113 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 211  Q
    ||||||||||| ||||| || ||||| ||||||||||||||| |||||||||||||||||||  |||||||||| |||| |||||||||| || ||||||    
T  19609363 atggactcaacgtctta-cagcttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacatt 19609461  T
Q  212 agcatcttaat 222  Q
    |||||| ||||    
T  19609462 agcatcctaat 19609472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 113 - 201
Target Start/End: Complemental strand, 10357453 - 10357365
Alignment:
Q  113 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaactta 201  Q
    ||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| |||| ||||||||||    
T  10357453 atggactcaacatctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaacaactta 10357365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 258 - 374
Target Start/End: Complemental strand, 52873367 - 52873252
Alignment:
Q  258 aaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacattatattgatcttttcacattta 357  Q
    ||||||||| |||||||||| | | ||||||||| ||| ||||||||||||||||||||||||||||| |||||||| |||||  || || ||||| |||    
T  52873367 aaataatttacagcaagtcaacatcaacaataatcatctaatacaaccattacaacttcatatcaacatctttcacaatatataaatattctcaca-tta 52873269  T
Q  358 atcatcaacataaatca 374  Q
    ||||||||  |||||||    
T  52873268 atcatcaaagtaaatca 52873252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 10357391 - 10357285
Alignment:
Q  119 tcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatc 217  Q
    ||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| |||| |||||||||| || |||||  ||| |    
T  10357391 tcaacatctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacatatgcaac 10357293  T
Q  218 ttaatgat 225  Q
    ||||||||    
T  10357292 ttaatgat 10357285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 111 - 157
Target Start/End: Original strand, 3514939 - 3514985
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttat 157  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  3514939 caatggactcaacatcttaacaacttaacaacttagacatctcttat 3514985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 421
Target Start/End: Original strand, 14185253 - 14185346
Alignment:
Q  327 ctttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatcttaatcatcctctctgaacctcattataatc 421  Q
    |||||||| |||||  || ||||||||||||| ||||||| |||| ||||||  |||| |||||||| |||| ||||||||||||||||||||||    
T  14185253 ctttcacaatatataaatattttcacatttaaccatcaacttaaaacaacaacgttaa-tcatcttattcatactctctgaacctcattataatc 14185346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 113 - 195
Target Start/End: Complemental strand, 15042141 - 15042058
Alignment:
Q  113 atggactcaacatcttaacaacttaa--caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaac 195  Q
    ||||||||||| ||||| ||||||||  ||||||||||||||| |||||||||||||||||||  |||||||||| |||| ||||    
T  15042141 atggactcaacgtctta-caacttaaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaac 15042058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 113 - 195
Target Start/End: Original strand, 15112283 - 15112366
Alignment:
Q  113 atggactcaacatcttaacaacttaa--caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaac 195  Q
    ||||||||||| ||||| ||||||||  ||||||||||||||| |||||||||||||||||||  |||||||||| |||| ||||    
T  15112283 atggactcaacgtctta-caacttaaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaac 15112366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 14185094 - 14185193
Alignment:
Q  139 caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatattaatacatcac 238  Q
    ||||||| ||||||| |||||||| | || |||||  |||||||||| |||| || ||||||| || |||||||||| ||||||||||||||||| ||||    
T  14185094 caacttaaacatctcatatgactcga-tagtttggatcaacatcttacaacttaagcaacttagaccaacattagcaccttaatgatattaatacgtcac 14185192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 111 - 190
Target Start/End: Original strand, 33185990 - 33186068
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataact 190  Q
    ||||||||||||||||||| | ||||||||||||||||||||| |||||  ||||| ||||||  |||||||||| ||||    
T  33185990 caatggactcaacatctta-cgacttaacaacttagacatctcatatgataccaatgatttggatcaacatcttacaact 33186068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 269 - 382
Target Start/End: Original strand, 15880732 - 15880845
Alignment:
Q  269 agcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacat 368  Q
    ||||||||| | | || |||||| |||| ||| ||| ||||||| |||||||||||  |||||||| |||||  || |||||||||||||| |||||  |    
T  15880732 agcaagtcaccatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatattttcacatttaataatcaaagt 15880831  T
Q  369 aaatcaacaatatt 382  Q
    |||||| |||||||    
T  15880832 aaatcatcaatatt 15880845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 243 - 334
Target Start/End: Original strand, 19609481 - 19609572
Alignment:
Q  243 caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcaca 334  Q
    ||||||| ||| || ||||||| |  | ||||||| | | ||||||||| ||| |||| |||||||||||||||||||||||| ||||||||    
T  19609481 caaggcagcaccattaaataatatgtaacaagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacatctttcaca 19609572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 119 - 149
Target Start/End: Original strand, 46642661 - 46642691
Alignment:
Q  119 tcaacatcttaacaacttaacaacttagaca 149  Q
    |||||||||||||||||||||||||||||||    
T  46642661 tcaacatcttaacaacttaacaacttagaca 46642691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 126; Significance: 8e-65; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 130 - 374
Target Start/End: Original strand, 362787 - 363031
Alignment:
Q  130 acaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatatta 229  Q
    ||||||| |||||||||||||||||||||| |||||||||||||  |||||||||| |||| ||||||||||||| ||||||||||||||||||||||||    
T  362787 acaactttacaacttagacatctcttatgaatccaataatttggatcaacatcttacaacttaaacaacttaaaccaacattagcatcttaatgatatta 362886  T
Q  230 atacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaact 328  Q
    ||||||||||| | ||||||||||| ||||| |||||| |||||||||| | | ||||||||| ||| ||||||| ||||||||||||||||||||| ||    
T  362887 atacatcacatcagcaaggcaacaccatcaattaatttacagcaagtcaacatcaacaataatcatctaatacaatcattacaacttcatatcaacatct 362986  T
Q  329 ttcacattatattgatcttttcacatttaatcatcaacataaatca 374  Q
    |||| | |||||  || || ||||| |||||||||||  |||||||    
T  362987 ttcaaaatatataaatattctcaca-ttaatcatcaaagtaaatca 363031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 113; Significance: 5e-57; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 111 - 334
Target Start/End: Complemental strand, 2649 - 2426
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||| |||||||||| || |||||    
T  2649 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacat 2550  T
Q  211 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccatta 309  Q
    ||| ||||| ||||||||||||| |||||    ||||||||||| || ||||||  | |||||||||| | | |||||||||  ||||||||||||||||    
T  2549 tag-atcttcatgatattaatacgtcacaaccgcaaggcaacaccattaaataaaatgcagcaagtcaacatcaacaataatcgtcaaatacaaccatta 2451  T
Q  310 caacttcatatcaacaactttcaca 334  Q
    | ||||||||| |||| ||||||||    
T  2450 cgacttcatataaacatctttcaca 2426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 106; Significance: 7e-53; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 111 - 240
Target Start/End: Original strand, 106328 - 106457
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||| |||| ||||||||||||| |||||    
T  106328 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataacttggatcaacatcttacaacttaaacaacttaaaccaacat 106427  T
Q  211 tagcatcttaatgatattaatacatcacat 240  Q
    ||||||||||||||||||||||||||||||    
T  106428 tagcatcttaatgatattaatacatcacat 106457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 105; Significance: 3e-52; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 113 - 434
Target Start/End: Complemental strand, 59566 - 59259
Alignment:
Q  113 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 211  Q
    ||||||||||||||||| |||||||| ||||||||||||||| ||||||| |||||||||||  |||||||||  |||| |||||||||| || ||||||    
T  59566 atggactcaacatctta-caacttaaacaacttagacatctcatatgacttcaataatttggatcaacatcttgcaacttaaacaacttagaccaacatt 59468  T
Q  212 agcatcttaatgatattaatacatcacattacaaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattaca 311  Q
    |||||| ||||          ||  |||   ||||||||||| || ||| ||| | |||||||||| | | ||||||||| ||| |||| ||| ||||||    
T  59467 agcatcctaat----------cacgacag--caaggcaacaccattaaaaaatatgcagcaagtcaacatcaacaataatcatccaatataacaattaca 59380  T
Q  312 acttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatcttaatcatcctctctgaacct 411  Q
    |||||||||||||| |||||||| |||||  ||| |||||||||||||||||||| |||||| |||| ||| |||||||||| |||| | ||||||||||    
T  59379 acttcatatcaacatctttcacaatatataaatc-tttcacatttaatcatcaacttaaatccacaacatt-aatcatcttattcatacactctgaacct 59282  T
Q  412 cattataatcattaacaacttca 434  Q
    |||||||||||||||||||||||    
T  59281 cattataatcattaacaacttca 59259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 111 - 440
Target Start/End: Original strand, 14228 - 14545
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    ||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||  ||| |||||| |||| || ||||||| |||         
T  14228 caatggactcaacatctta-cgacttaacaacttagacatctcatatgactccaataatttggatcaaaatcttacaacttaa-caacttagaca----- 14320  T
Q  211 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccatta 309  Q
         |||||||| ||||||| |||||||  | |||| |||||  ||  ||  || | || ||||||| | | || |||||| |||  ||| ||| ||||    
T  14321 -----tcttaatggtattaattcatcacaacagcaagacaacatcatttaaacatatgcatcaagtcaccatcaataataatcatcttatataacaatta 14415  T
Q  310 caacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatcttaatcatcctctctgaac 409  Q
    |||||||||||||||  ||||||||||||||  || ||||||||||||||||||||  ||||||| ||||||||| |||||||| |||||||||||||||    
T  14416 caacttcatatcaacgtctttcacattatatgaatattttcacatttaatcatcaaagtaaatcatcaatattaa-tcatcttattcatcctctctgaac 14514  T
Q  410 ctcattataatcattaacaacttcattccta 440  Q
    |||||||||||||||||||| ||||||||||    
T  14515 ctcattataatcattaacaatttcattccta 14545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1792 (Bit Score: 99; Significance: 1e-48; HSPs: 2)
Name: scaffold1792
Description:

Target: scaffold1792; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 138 - 320
Target Start/End: Original strand, 232 - 414
Alignment:
Q  138 acaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatattaatacatca 237  Q
    |||||||| ||||||| |||||||||||||| |||| |||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||    
T  232 acaacttaaacatctcatatgactccaataaattggaccaacatcttataactcaaacgacttaaaccaacattagcatcttaatgatattaatacatca 331  T
Q  238 cattacaaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatat 320  Q
    ||| |  ||||||||| ||| |||||||| || ||||||| | | ||||||||| |||||||| || ||||| ||||||||||    
T  332 catcagcaggcaacaccatcgaataatttacaacaagtcaacatcaacaataatcatcaaatataatcattataacttcatat 414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1792; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 111 - 196
Target Start/End: Original strand, 158 - 243
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaaca 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||| |||||    
T  158 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttggatcaacatcttacaacttaaaca 243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 99; Significance: 1e-48; HSPs: 3)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 138 - 320
Target Start/End: Complemental strand, 23668 - 23486
Alignment:
Q  138 acaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatattaatacatca 237  Q
    |||||||| ||||||| |||||||||||||| |||| |||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||    
T  23668 acaacttaaacatctcatatgactccaataaattggaccaacatcttataactcaaacgacttaaaccaacattagcatcttaatgatattaatacatca 23569  T
Q  238 cattacaaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatat 320  Q
    ||| |  ||||||||| ||| |||||||| || ||||||| | | ||||||||| |||||||| || ||||| ||||||||||    
T  23568 catcagcaggcaacaccatcgaataatttacaacaagtcaacatcaacaataatcatcaaatataatcattataacttcatat 23486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 111 - 196
Target Start/End: Complemental strand, 23742 - 23657
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaaca 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||| |||||    
T  23742 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttggatcaacatcttacaacttaaaca 23657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 111 - 152
Target Start/End: Complemental strand, 20811 - 20770
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatct 152  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  20811 caatggactcaacatcttaacaacttaacaactttgacatct 20770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 98; Significance: 4e-48; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 138 - 433
Target Start/End: Original strand, 2980 - 3261
Alignment:
Q  138 acaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatattaatacatca 237  Q
    |||||||| | ||||| |||||||||||||||||||  |||||||||| |||| |||||||||| ||||||||||||||| |||| |            |    
T  2980 acaacttaaaaatctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagacaaacattagcatcctaataacg----------a 3069  T
Q  238 cattacaaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacatta 337  Q
    ||  |||||||||||  || ||||||| | |||||||||| | | ||||||||| ||| |||| ||||||||||||||||||||||||  ||||||  ||    
T  3070 ca--acaaggcaacaacattaaataatatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacatttttcacgata 3167  T
Q  338 tattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatcttaatcatcctctctgaacctcattataatcattaacaacttc 433  Q
    |||  |||||| ||||||||||||||||| |||||| |||| ||||| |||||||| |||| ||||||||||||||||||||||||||||||||||    
T  3168 tataaatcttt-cacatttaatcatcaacttaaatccacaacattaa-tcatcttattcatactctctgaacctcattataatcattaacaacttc 3261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 93; Significance: 4e-45; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 138 - 340
Target Start/End: Complemental strand, 8616 - 8412
Alignment:
Q  138 acaacttagacatctcttatgactccaataatttgggccaacatcttataa-ctgaaacaacttaaacaaacattagcatcttaatgatattaatacatc 236  Q
    |||||||| ||||||| |||||||| ||||| ||||||| ||||||||||| || |||  |||||||  |||||||||||||||||||||||||||||||    
T  8616 acaacttaaacatctcatatgactctaataaattgggccgacatcttataaactcaaatgacttaaatcaacattagcatcttaatgatattaatacatc 8517  T
Q  237 acatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacat 335  Q
    |||| | ||||||||||  |||||||||||| || ||||||| | | ||||||||| ||||||||||| |||||||||||||||||| || | ||||||     
T  8516 acatcagcaaggcaacaacatcaaataatttgcaacaagtcaacatcaacaataatcatcaaatacaatcattacaacttcatatcatcatcattcacaa 8417  T
Q  336 tatat 340  Q
    |||||    
T  8416 tatat 8412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 111 - 196
Target Start/End: Complemental strand, 8690 - 8605
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaaca 196  Q
    |||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||  |||||| ||| |||| |||||    
T  8690 caatggactcaacatcctaacaacttaataatttagacatctcttatgactccaataatttggatcaacatattacaacttaaaca 8605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 91; Significance: 6e-44; HSPs: 4)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 117 - 447
Target Start/End: Complemental strand, 6636 - 6318
Alignment:
Q  117 actcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagca 215  Q
    ||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| |||| || |||||| |           ||    
T  6636 actcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaa-caacttga-----------ca 6550  T
Q  216 tcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaact 314  Q
    |||||||| ||||||| ||||||| || |||| |||||| ||  ||  || | |||||||||| | | || |||||| |||| ||| ||| ||||||| |    
T  6549 tcttaatggtattaattcatcacaatagcaagacaacaccatttaaacatatgcagcaagtcaccatcaataataatcatcatatataacaattacaatt 6450  T
Q  315 tcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatcttaatcatcctctctgaacctcat 414  Q
    ||||||||||  |||||||| |||||  || ||||||||||||||||||||  |||||||  | |||||| |||||||| ||||||||||||||||||||    
T  6449 tcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaaagtaaatcattattattaa-tcatcttattcatcctctctgaacctcat 6351  T
Q  415 tataatcattaacaacttcattcctatcccaag 447  Q
    ||||||||||||||||||| |||||| ||||||    
T  6350 tataatcattaacaacttccttcctaccccaag 6318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 119 - 200
Target Start/End: Complemental strand, 5667 - 5586
Alignment:
Q  119 tcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaactt 200  Q
    ||||||||||| |||||||| ||||||||| ||||| |||||||||||||||||||  |||||||||| |||| |||||||||    
T  5667 tcaacatctta-caacttaaacaacttagagatctcatatgactccaataatttggatcaacatcttacaacttaaacaactt 5586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 5705 - 5641
Alignment:
Q  137 aacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaactta 201  Q
    ||||||||||||||||| ||||||| |||||||||||  |||||||||| |||| ||||||||||    
T  5705 aacaacttagacatctcatatgactgcaataatttggatcaacatcttacaacttaaacaactta 5641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 200
Target Start/End: Complemental strand, 5814 - 5751
Alignment:
Q  137 aacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaactt 200  Q
    ||||||||||||||||| ||||||| |||||||||||  |||||||||| |||| |||||||||    
T  5814 aacaacttagacatctcatatgactgcaataatttggatcaacatcttacaacttaaacaactt 5751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 90; Significance: 2e-43; HSPs: 4)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 138 - 322
Target Start/End: Original strand, 13364 - 13549
Alignment:
Q  138 acaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatattaatacatca 237  Q
    |||| ||| ||||||| |||||||||||||| ||||||| ||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| ||||    
T  13364 acaaattaaacatctcatatgactccaataaattgggccgacatcttataactcaaacgacttaaaccaacattagcatcttaatgatattaatatatca 13463  T
Q  238 catta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatca 322  Q
     || | ||||||||||  |||| ||||||| || ||||||| | | ||||||||| ||||||||||  ||||||||||||||||||    
T  13464 gatcagcaaggcaacaacatcatataatttgcaacaagtcaacatcaacaataatcatcaaatacattcattacaacttcatatca 13549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 138 - 265
Target Start/End: Original strand, 25065 - 25193
Alignment:
Q  138 acaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatattaatacatca 237  Q
    |||| ||| ||||||| |||||||||||||| ||||||| ||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| ||||    
T  25065 acaaattaaacatctcatatgactccaataaattgggccgacatcttataactcaaacgacttaaaccaacattagcatcttaatgatattaatatatca 25164  T
Q  238 catta-caaggcaacacaatcaaataatt 265  Q
     || | ||||||||||  |||| ||||||    
T  25165 gatcagcaaggcaacaacatcatataatt 25193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 13290 - 13364
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatctta 185  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  13290 caatggactcaacatcctaacaacttaacaacttagacatctcttatgactccaataatttggatcaacatctta 13364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 24991 - 25065
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatctta 185  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  24991 caatggactcaacatcctaacaacttaacaacttagacatctcttatgactccaataatttggatcaacatctta 25065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 243 - 447
Target Start/End: Original strand, 206 - 409
Alignment:
Q  243 caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacattatattg 342  Q
    ||||||||||| || ||||||| | || ||||||| | | || |||||| |||| ||| ||| ||||||| |||||||||||  |||||||| |||||      
T  206 caaggcaacaccattaaataatatgcatcaagtcaacatcaataataataatcatatataacaattacaatttcatatcaacgtctttcacaatatataa 305  T
Q  343 atcttttcacatttaatcatcaacataaatcaacaatattaaatcatcttaatcatcctctctgaacctcattataatcattaacaacttcattcctatc 442  Q
    || ||||||||| ||||||||||  ||||||| || |||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |    
T  306 atattttcacatataatcatcaaagtaaatcatcattattaa-tcatcttattcatcctctctgaacctaattataatcattaacaacttcattcctacc 404  T
Q  443 ccaag 447  Q
    |||||    
T  405 ccaag 409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 243 - 411
Target Start/End: Original strand, 4624 - 4791
Alignment:
Q  243 caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacattatattg 342  Q
    ||||||||||| || ||||||| | || ||||||| | | || |||||| |||| ||| ||| ||||||| |||||||||||  |||||||| |||||      
T  4624 caaggcaacaccattaaataatatgcatcaagtcaacatcaataataataatcatatataacaattacaatttcatatcaacgtctttcacaatatataa 4723  T
Q  343 atcttttcacatttaatcatcaacataaatcaacaatattaaatcatcttaatcatcctctctgaacct 411  Q
    || ||||||||||||||||||||  ||||||| || |||| |||||||||| |||||||||||||||||    
T  4724 atattttcacatttaatcatcaaagtaaatcatcattatt-aatcatcttattcatcctctctgaacct 4791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 79; Significance: 9e-37; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 197 - 322
Target Start/End: Complemental strand, 24916 - 24790
Alignment:
Q  197 acttaaacaaacattagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatc 295  Q
    |||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||  |||||||||||| |||||||||| | | ||||||||| |||    
T  24916 acttaaaccaacattagcatcttaatgatattaatacatcacatcagcaaggcaacaacatcaaataatttacagcaagtcaacatcaacaataatcatc 24817  T
Q  296 aaatacaaccattacaacttcatatca 322  Q
    |||||||| ||||||||||||||||||    
T  24816 aaatacaatcattacaacttcatatca 24790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 111 - 222
Target Start/End: Complemental strand, 47033 - 46923
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    ||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||| |||||||  ||||||||||||||| |||||||||| || |||||    
T  47033 caatggactcaacatttta-caacttaacaacttagacatctcatatgactccaacaatttggatcaacatcttataacttaaacaacttagaccaacat 46935  T
Q  211 tagcatcttaat 222  Q
    ||||||||||||    
T  46934 tagcatcttaat 46923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 197 - 322
Target Start/End: Complemental strand, 7911 - 7784
Alignment:
Q  197 acttaaacaaacattagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatc 295  Q
    |||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||  |||||||||||  |||||||||| | | ||||||||| |||    
T  7911 acttaaaccaacattagcatcttaatgatattaatacatcacatcagcaaggcaacaacatcaaataattcacagcaagtcaacgtcaacaataatcatc 7812  T
Q  296 aaatacaaccattac-aacttcatatca 322  Q
    |||||||| |||||| ||||||||||||    
T  7811 aaatacaatcattacaaacttcatatca 7784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 64; Significance: 8e-28; HSPs: 3)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 111 - 206
Target Start/End: Complemental strand, 19409 - 19314
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaa 206  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||  |||  |||||||| |||||    
T  19409 caatggactcaacatcttaacaacttaacaacttagacatctcatatgactccaataatttggatcaacatcttacgacttgaacaacttgaacaa 19314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 310 - 393
Target Start/End: Complemental strand, 15503 - 15421
Alignment:
Q  310 caacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatctta 393  Q
    ||||||||||||||||  ||||||| |||||  || ||||||||||||||||||||| ||||||||||| ||| ||||||||||    
T  15503 caacttcatatcaacatttttcacaatatataaatattttcacatttaatcatcaacttaaatcaacaacatt-aatcatctta 15421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 310 - 393
Target Start/End: Complemental strand, 24561 - 24479
Alignment:
Q  310 caacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatctta 393  Q
    ||||||||||||||||  ||||||| |||||  || ||||||||||||||||||||| ||||||||||| ||| ||||||||||    
T  24561 caacttcatatcaacatttttcacaatatataaatattttcacatttaatcatcaacttaaatcaacaacatt-aatcatctta 24479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 111 - 185
Target Start/End: Original strand, 34877 - 34951
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatctta 185  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  34877 caatggactcaacatcctaacaacttaacaacttagacatctcttatgactccaataatttggatcaacatctta 34951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 111 - 225
Target Start/End: Original strand, 145825 - 145938
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    ||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||  |||||||||| |||| |||||||||| || |||||    
T  145825 caatggactcaacatctta-caatttaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacat 145923  T
Q  211 tagcatcttaatgat 225  Q
      ||| |||||||||    
T  145924 atgcaacttaatgat 145938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 243 - 384
Target Start/End: Original strand, 814 - 954
Alignment:
Q  243 caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacattatattg 342  Q
    ||||||| ||| || | ||||| | |||||||||| | | ||||||||| ||| |||| |||||||||||||||||||||||| |||||||| ||||||     
T  814 caaggcagcacgattagataatatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacatctttcacaatatatta 913  T
Q  343 atcttttcacatttaatcatcaacataaatcaacaatattaa 384  Q
    ||| |||||||||||||||||||| |||||| |||| |||||    
T  914 atc-tttcacatttaatcatcaacttaaatccacaacattaa 954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 113 - 334
Target Start/End: Complemental strand, 9315 - 9106
Alignment:
Q  113 atggactcaacatcttaacaacttaac-aacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 211  Q
    ||||||||||| ||||| ||||||||  |||||| ||| ||| |||||||||||||||||||  |||||||||| |||| |||||||||| || ||||||    
T  9315 atggactcaacgtctta-caacttaaataacttaaacacctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacatt 9217  T
Q  212 agcatcttaatgatattaatacatcacattacaaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattaca 311  Q
    |||||| ||||          ||  ||||  ||||||| ||| || ||||||| | |||||||||| | | ||||||||| ||| |||| ||||||||||    
T  9216 agcatcctaat----------cacgacat--caaggcagcaccattaaataatatgcagcaagtcaacatcaacaataatcatccaatataaccattaca 9129  T
Q  312 acttcatatcaacaactttcaca 334  Q
    |||||||||||||| ||||||||    
T  9128 acttcatatcaacatctttcaca 9106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0513 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 245 - 340
Target Start/End: Complemental strand, 11092 - 10997
Alignment:
Q  245 aggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacattatat 340  Q
    ||||||||| |||||||||||| |||||||||| | | ||||||||| ||| ||||||||||||||||||||||||||||| |||| ||| |||||    
T  11092 aggcaacaccatcaaataatttacagcaagtcaacatcaacaataatcatctaatacaaccattacaacttcatatcaacatcttttacaatatat 10997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 243 - 384
Target Start/End: Complemental strand, 5599 - 5459
Alignment:
Q  243 caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacattatattg 342  Q
    ||||||| ||| || ||||||| | |||||||| | | | ||||||||| ||| |||| || ||||||||||||||||||||| |||||||| |||||      
T  5599 caaggcagcaccattaaataatatgcagcaagttaacatcaacaataatcatccaatataaacattacaacttcatatcaacacctttcacaatatataa 5500  T
Q  343 atcttttcacatttaatcatcaacataaatcaacaatattaa 384  Q
    ||| |||||||||||||||||||| |||||| |||| |||||    
T  5499 atc-tttcacatttaatcatcaacttaaatccacaacattaa 5459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1351 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold1351
Description:

Target: scaffold1351; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 111 - 405
Target Start/End: Original strand, 1454 - 1736
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacat 210  Q
    |||| ||||| |||||||| | ||||||||||||||||||||| ||| |||||||||||||||  |||||||||| |||| || ||||||| |||         
T  1454 caatagactcgacatctta-cgacttaacaacttagacatctcatataactccaataatttggatcaacatcttacaacttaa-caacttagaca----- 1546  T
Q  211 tagcatcttaatgatattaatacatcacatta-caaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccatta 309  Q
         |||||||| ||||||| |||||||  | |||| |||||  ||  ||  || | || ||||||| | | || |||||| |||  ||| ||| ||||    
T  1547 -----tcttaatggtattaattcatcacaacaacaagacaacatcatttaaacatatgcatcaagtcaccatcaataataatcatcttatataacaatta 1641  T
Q  310 caacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaatcatcttaatcatcctctct 405  Q
    |||||||||||||||  |||||||| |||||  || ||||||||||||||||||||  ||||||| ||||||| |||||||||| | |||||||||    
T  1642 caacttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaaagtaaatcatcaatatt-aatcatcttattaatcctctct 1736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 113 - 334
Target Start/End: Complemental strand, 10239 - 10030
Alignment:
Q  113 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 211  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||| |||||  ||| ||||||||||  | ||||||    
T  10239 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacgtcttacgacttaaacaacttaggccaacatt 10141  T
Q  212 agcatcttaatgatattaatacatcacattacaaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattaca 311  Q
    |||||| ||||          ||  |||   ||||||| ||| || ||||||| | |||||||||| | | ||||||||| ||| |||| ||||||||||    
T  10140 agcatcctaat----------cacgaca--gcaaggcagcaccattaaataatatgcagcaagtcaacatcaacaataatcatccaatataaccattaca 10053  T
Q  312 acttcatatcaacaactttcaca 334  Q
    |||||||||||||| ||||||||    
T  10052 acttcatatcaacatctttcaca 10030  T

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Target: scaffold0509 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 9771 - 9673
Alignment:
Q  113 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 211  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| |||| |||||||||| || ||||||    
T  9771 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacatt 9673  T

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Target: scaffold0509; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 258 - 334
Target Start/End: Complemental strand, 9638 - 9562
Alignment:
Q  258 aaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcaca 334  Q
    ||||||| | |||||||||| | | |||  |||| ||| |||| ||||||||||||||||||| |||| ||||||||    
T  9638 aaataatatgcagcaagtcaacatcaacggtaatcatccaatataaccattacaacttcatattaacatctttcaca 9562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 255 - 374
Target Start/End: Complemental strand, 36261 - 36143
Alignment:
Q  255 atcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacattatattgatcttttcacat 354  Q
    |||||||||||| |||||||||| | | ||||||||| ||| |||| |||||||||||||||||||||||| |||||||| |||||  || || |||||     
T  36261 atcaaataatttacagcaagtcaacatcaacaataatcatctaatataaccattacaacttcatatcaacatctttcacaatatataaatattctcaca- 36163  T
Q  355 ttaatcatcaacataaatca 374  Q
    |||||||||||  |||||||    
T  36162 ttaatcatcaaagtaaatca 36143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 244 - 374
Target Start/End: Complemental strand, 6901 - 6771
Alignment:
Q  244 aaggcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacattatattga 343  Q
    |||||| ||| || ||||||| | |||||||||| | | ||||||||| |||||||| || |||||||||| |||||||||  |||||||| |||||  |    
T  6901 aaggcagcaccattaaataatatgcagcaagtcaacatgaacaataatcatcaaatataatcattacaactccatatcaacgtctttcacaatatataaa 6802  T
Q  344 tcttttcacatttaatcatcaacataaatca 374  Q
    | ||||||||||||||||||||  |||||||    
T  6801 tattttcacatttaatcatcaaagtaaatca 6771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 283 - 384
Target Start/End: Original strand, 76939 - 77038
Alignment:
Q  283 aacaataattatcaaatacaaccattacaacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatatt 382  Q
    ||||||||| ||| |||| |||||||||||||||||||| ||| |||||||| |||||  |  ||||||||||||||||||||| |||||| |||| |||    
T  76939 aacaataatcatccaatataaccattacaacttcatatccacatctttcacaatatat--aaattttcacatttaatcatcaacttaaatccacaacatt 77036  T

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Target: scaffold0001; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 117 - 190
Target Start/End: Original strand, 76794 - 76867
Alignment:
Q  117 actcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataact 190  Q
    ||||||| ||||| |||||||| |||||| |||||||| |||||||||||||||||||  |||||||||| ||||    
T  76794 actcaacgtctta-caacttaaacaactttgacatctcatatgactccaataatttggatcaacatcttacaact 76867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 147 - 334
Target Start/End: Complemental strand, 8365 - 8190
Alignment:
Q  147 acatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaatgatattaatacatcacattacaag 246  Q
    ||||||| |||||||||||||||||||  |||||||||| |||| |||||||||| || |||||||||||| ||||          ||  |||   ||||    
T  8365 acatctcatatgactccaataatttggatcaacatcttacaacttaaacaacttagaccaacattagcatcctaat----------cacgaca--gcaag 8278  T
Q  247 gcaacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcaca 334  Q
    ||| ||| || ||||||| | |||||||||| | | ||||| ||| ||| |||| |||||||||||||||||||||||| ||||||||    
T  8277 gcagcaccattaaataatatgcagcaagtcaacatcaacaacaatcatccaatataaccattacaacttcatatcaacatctttcaca 8190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 113 - 225
Target Start/End: Original strand, 57839 - 57951
Alignment:
Q  113 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacatt 211  Q
    ||||||||||  ||||| |||||||| ||||||||||||||| |||||||||| ||||||||  |||||||||| |||| |||||||||| || |||||     
T  57839 atggactcaatgtctta-caacttaaacaacttagacatctcatatgactccagtaatttggatcaacatcttacaacttaaacaacttagaccaacata 57937  T
Q  212 agcatcttaatgat 225  Q
     ||| |||||||||    
T  57938 tgcaacttaatgat 57951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 111 - 173
Target Start/End: Original strand, 4626 - 4689
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttat-gactccaataatttgg 173  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||  | |||||||||||||    
T  4626 caatggactcaacatcttaacaacttaataacttagacatctcttatataatccaataatttgg 4689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 190
Target Start/End: Complemental strand, 2849 - 2772
Alignment:
Q  113 atggactcaacatcttaacaacttaa-caacttagacatctcttatgactccaataatttgggccaacatcttataact 190  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||| ||||    
T  2849 atggactcaacgtctta-caacttaaacaacttagacatctcatatgactccaataatttggatcaacatcttacaact 2772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 117 - 190
Target Start/End: Original strand, 263 - 335
Alignment:
Q  117 actcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataact 190  Q
    ||||||||||||| | ||||||||||||||| ||||| |||||||||||||||||||  |||||||||| ||||    
T  263 actcaacatctta-cgacttaacaacttagatatctcatatgactccaataatttggatcaacatcttacaact 335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 74596 - 74645
Alignment:
Q  136 taacaacttagacatctcttatgactccaataatttgggccaacatctta 185  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  74596 taacaacttagacatctcttatgactccaataatttggatcaacatctta 74645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 7642 - 7585
Alignment:
Q  138 acaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaac 195  Q
    |||||||||||||||| |||||||||||||||||||  |||||||||| |||| ||||    
T  7642 acaacttagacatctcatatgactccaataatttggatcaacatcttacaacttaaac 7585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 138 - 222
Target Start/End: Complemental strand, 2664 - 2581
Alignment:
Q  138 acaacttagacatctcttatgactccaataatttgggccaacatcttataactgaaacaacttaaacaaacattagcatcttaat 222  Q
    ||||||||||| |||| |||||||||||||||||||  ||| |||||| || | |||||||||| || |||||||||||| ||||    
T  2664 acaacttagac-tctcatatgactccaataatttggatcaaaatcttacaatttaaacaacttagaccaacattagcatcctaat 2581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 365
Target Start/End: Complemental strand, 2567 - 2449
Alignment:
Q  248 caacacaatcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatcaacaactttcacattatattgatctt 347  Q
    |||||| || ||||||| | |||||||||| | | ||||||||| ||| |||| ||||||||||||||| ||| | || |||||||| |||||  |||||    
T  2567 caacactattaaataatatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcttatgagcatctttcacaatatataaatctt 2468  T
Q  348 t-tcacatttaatcatcaa 365  Q
    |   |||||||||||||||    
T  2467 tcgtacatttaatcatcaa 2449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 111 - 190
Target Start/End: Original strand, 10783 - 10861
Alignment:
Q  111 caatggactcaacatcttaacaacttaacaacttagacatctcttatgactccaataatttgggccaacatcttataact 190  Q
    ||||||||||||||||||| | |||||| |||||| ||| ||| ||| |||||||||||||||  |||||||||| ||||    
T  10783 caatggactcaacatctta-cgacttaataacttatacacctcatataactccaataatttggatcaacatcttacaact 10861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 286 - 395
Target Start/End: Original strand, 10947 - 11055
Alignment:
Q  286 aataattatcaaatacaaccattacaacttcatatcaacaactttcacattatattgatcttttcacatttaatcatcaacataaatcaacaatattaaa 385  Q
    |||||| |||| ||| ||| |||| || |||||||||||  |||||||| |||||  || |||||||||||||||||||   ||||||| ||| ||| ||    
T  10947 aataatcatcatatataacaattaaaaattcatatcaacgtctttcacaatatataaatattttcacatttaatcatcatagtaaatcatcaacatt-aa 11045  T
Q  386 tcatcttaat 395  Q
    ||||||||||    
T  11046 tcatcttaat 11055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 322
Target Start/End: Complemental strand, 18539 - 18472
Alignment:
Q  255 atcaaataatttccagcaagtcatctttaacaataattatcaaatacaaccattacaacttcatatca 322  Q
    |||||||||||| || ||||||| | | ||||||||| ||||||||||  ||||||||||||||||||    
T  18539 atcaaataatttgcaacaagtcaacatcaacaataatcatcaaatacattcattacaacttcatatca 18472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 9803 - 9848
Alignment:
Q  143 ttagacatctcttatgactccaataatttgggccaacatcttataa 188  Q
    |||||||||||||||||||||||||| |||| || |||||||||||    
T  9803 ttagacatctcttatgactccaataagttggaccgacatcttataa 9848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0377 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0377
Description:

Target: scaffold0377; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 390 - 447
Target Start/End: Complemental strand, 16810 - 16752
Alignment:
Q  390 cttaatcatcctctctgaacctcattataatcattaacaac-ttcattcctatcccaag 447  Q
    ||||| ||| |||||  |||||||||||||||||||||||| |||||||||| ||||||    
T  16810 cttaagcatactctcccaacctcattataatcattaacaactttcattcctaccccaag 16752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 1780 - 1837
Alignment:
Q  129 aacaacttaacaacttagacatctctt-atgactccaataatttgggccaacatctta 185  Q
    |||| |||||||||||||||| ||||| ||||||||||||| ||||  ||||||||||    
T  1780 aacatcttaacaacttagacaactctttatgactccaataacttggatcaacatctta 1837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 400 - 447
Target Start/End: Complemental strand, 36240 - 36192
Alignment:
Q  400 ctctctgaacctcattataatcattaacaacttc-attcctatcccaag 447  Q
    |||||| ||||| ||||||||||||||||||||| ||||||| ||||||    
T  36240 ctctctcaaccttattataatcattaacaacttctattcctaccccaag 36192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 446
Target Start/End: Original strand, 95634 - 95698
Alignment:
Q  384 aatcatcttaat-catcctctctgaacctcattataatcattaacaac-ttcattcctatcccaa 446  Q
    |||||||||||| ||  |||||||||||||||||||||| | |||||| || |||||||||||||    
T  95634 aatcatcttaattcacgctctctgaacctcattataatcttaaacaactttgattcctatcccaa 95698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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