View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0755_low_57 (Length: 351)

Name: NF0755_low_57
Description: NF0755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0755_low_57
NF0755_low_57
[»] chr4 (71 HSPs)
chr4 (83-223)||(47720175-47720315)
chr4 (221-330)||(47853602-47853712)
chr4 (221-330)||(47720032-47720142)
chr4 (83-208)||(40622190-40622315)
chr4 (83-213)||(8530859-8530989)
chr4 (83-213)||(13628095-13628225)
chr4 (83-213)||(47557541-47557671)
chr4 (83-214)||(37701714-37701845)
chr4 (83-209)||(5272395-5272521)
chr4 (83-205)||(26870413-26870535)
chr4 (83-209)||(33503117-33503244)
chr4 (83-209)||(1944535-1944661)
chr4 (83-209)||(7643912-7644038)
chr4 (83-209)||(14829631-14829757)
chr4 (83-209)||(23478953-23479079)
chr4 (83-209)||(34056683-34056809)
chr4 (83-209)||(38007887-38008013)
chr4 (83-209)||(41984353-41984479)
chr4 (83-214)||(740525-740656)
chr4 (83-214)||(15520759-15520890)
chr4 (83-214)||(35495658-35495789)
chr4 (83-208)||(53342452-53342577)
chr4 (98-209)||(3839485-3839596)
chr4 (83-213)||(17740083-17740213)
chr4 (83-209)||(54331763-54331889)
chr4 (83-209)||(19831517-19831643)
chr4 (83-209)||(39742866-39742992)
chr4 (83-193)||(53991383-53991493)
chr4 (83-196)||(21353142-21353255)
chr4 (1-82)||(47720410-47720491)
chr4 (83-193)||(35707764-35707874)
chr4 (84-209)||(28135185-28135309)
chr4 (1-71)||(1944359-1944429)
chr4 (83-205)||(36857131-36857252)
chr4 (83-209)||(55998817-55998943)
chr4 (1-82)||(15520583-15520664)
chr4 (1-81)||(740752-740832)
chr4 (1-81)||(17739906-17739986)
chr4 (2-82)||(22116381-22116461)
chr4 (83-209)||(17699219-17699346)
chr4 (2-81)||(19831739-19831818)
chr4 (83-193)||(574283-574393)
chr4 (1-82)||(574488-574569)
chr4 (1-82)||(35707969-35708050)
chr4 (1-82)||(40622015-40622095)
chr4 (2-82)||(2776160-2776240)
chr4 (83-183)||(2776335-2776435)
chr4 (2-82)||(34056904-34056984)
chr4 (2-82)||(35495884-35495964)
chr4 (2-82)||(37701940-37702020)
chr4 (2-82)||(38007712-38007792)
chr4 (1-82)||(3839712-3839793)
chr4 (1-82)||(8530697-8530778)
chr4 (2-82)||(7644133-7644213)
chr4 (2-82)||(14829852-14829932)
chr4 (2-82)||(23478778-23478858)
chr4 (2-82)||(54331984-54332064)
chr4 (2-82)||(55999038-55999118)
chr4 (3-82)||(5272616-5272695)
chr4 (122-209)||(28973144-28973231)
chr4 (9-82)||(21352974-21353047)
chr4 (5-70)||(26870637-26870702)
chr4 (1-82)||(41984574-41984655)
chr4 (2-82)||(28135407-28135487)
chr4 (2-82)||(53342276-53342356)
chr4 (2-74)||(13627920-13627992)
chr4 (2-82)||(33503339-33503419)
chr4 (2-82)||(36856956-36857036)
chr4 (2-82)||(17699044-17699124)
chr4 (6-82)||(39743087-39743163)
chr4 (83-194)||(22116171-22116286)
[»] chr2 (61 HSPs)
chr2 (83-209)||(14753241-14753366)
chr2 (83-209)||(35286447-35286573)
chr2 (83-213)||(18092825-18092955)
chr2 (83-213)||(1515093-1515223)
chr2 (83-209)||(16724456-16724582)
chr2 (83-209)||(28380110-28380236)
chr2 (83-209)||(45398801-45398927)
chr2 (83-209)||(4811607-4811733)
chr2 (83-209)||(21097758-21097884)
chr2 (83-209)||(45205125-45205251)
chr2 (83-208)||(10821312-10821437)
chr2 (83-214)||(6342945-6343076)
chr2 (83-214)||(14323429-14323560)
chr2 (83-214)||(28502210-28502341)
chr2 (83-205)||(17091836-17091958)
chr2 (83-209)||(26821679-26821805)
chr2 (2-81)||(14753066-14753145)
chr2 (83-205)||(17025651-17025773)
chr2 (90-209)||(33663901-33664020)
chr2 (83-193)||(9916812-9916922)
chr2 (83-205)||(17037328-17037450)
chr2 (83-209)||(30566972-30567098)
chr2 (83-209)||(30570657-30570783)
chr2 (83-209)||(19167748-19167876)
chr2 (1-82)||(35286668-35286749)
chr2 (1-74)||(10821540-10821613)
chr2 (84-213)||(36633189-36633318)
chr2 (83-201)||(1993171-1993288)
chr2 (4-82)||(4811434-4811512)
chr2 (1-82)||(1993383-1993464)
chr2 (1-82)||(6343171-6343252)
chr2 (1-82)||(9917017-9917098)
chr2 (1-74)||(16883807-16883880)
chr2 (5-74)||(17025479-17025548)
chr2 (5-74)||(17037156-17037225)
chr2 (1-74)||(17041497-17041570)
chr2 (5-74)||(17091664-17091733)
chr2 (1-82)||(28380331-28380412)
chr2 (1-82)||(28502034-28502115)
chr2 (1-82)||(45398625-45398706)
chr2 (1-81)||(14323656-14323736)
chr2 (2-74)||(36633422-36633494)
chr2 (1-82)||(1515318-1515399)
chr2 (2-82)||(16724677-16724757)
chr2 (2-82)||(21097583-21097663)
chr2 (122-209)||(42885474-42885561)
chr2 (9-82)||(18093050-18093123)
chr2 (2-82)||(26821504-26821584)
chr2 (2-82)||(42885275-42885355)
chr2 (2-82)||(45205346-45205426)
chr2 (122-209)||(26827598-26827685)
chr2 (122-209)||(33907326-33907413)
chr2 (8-82)||(19167971-19168045)
chr2 (2-82)||(30567193-30567273)
chr2 (2-82)||(30570878-30570958)
chr2 (2-82)||(33664123-33664203)
chr2 (122-214)||(11706711-11706803)
chr2 (149-209)||(30572537-30572597)
chr2 (221-308)||(25205874-25205961)
chr2 (83-133)||(16883983-16884033)
chr2 (83-133)||(17041673-17041723)
[»] chr7 (60 HSPs)
chr7 (83-209)||(9226329-9226456)
chr7 (83-209)||(42827484-42827610)
chr7 (83-207)||(33638786-33638910)
chr7 (83-202)||(47174503-47174622)
chr7 (83-209)||(23766548-23766674)
chr7 (83-205)||(42996476-42996598)
chr7 (83-213)||(9149389-9149520)
chr7 (84-214)||(23299827-23299957)
chr7 (83-213)||(27735154-27735284)
chr7 (83-209)||(42244965-42245091)
chr7 (83-214)||(6911579-6911710)
chr7 (83-214)||(47573557-47573688)
chr7 (83-209)||(17477917-17478043)
chr7 (83-209)||(17575171-17575297)
chr7 (83-205)||(19521154-19521276)
chr7 (83-205)||(38434663-38434785)
chr7 (83-209)||(47163660-47163788)
chr7 (83-202)||(8926007-8926126)
chr7 (83-209)||(5962724-5962850)
chr7 (83-209)||(11499886-11500013)
chr7 (83-177)||(3795538-3795632)
chr7 (83-209)||(4481496-4481622)
chr7 (83-205)||(33030824-33030946)
chr7 (83-209)||(42687580-42687706)
chr7 (83-194)||(17469775-17469886)
chr7 (83-194)||(17583328-17583439)
chr7 (1-82)||(9149213-9149294)
chr7 (1-82)||(9226551-9226632)
chr7 (1-82)||(23300050-23300131)
chr7 (1-82)||(27735379-27735460)
chr7 (1-82)||(42827705-42827786)
chr7 (1-82)||(47174327-47174408)
chr7 (3-74)||(47163891-47163962)
chr7 (1-82)||(6911805-6911886)
chr7 (83-209)||(17482364-17482486)
chr7 (83-209)||(17570728-17570850)
chr7 (5-74)||(38434888-38434957)
chr7 (1-82)||(47573783-47573864)
chr7 (2-82)||(14308783-14308863)
chr7 (2-82)||(17482189-17482269)
chr7 (2-82)||(17570945-17571025)
chr7 (2-82)||(23766769-23766849)
chr7 (1-74)||(3795362-3795435)
chr7 (1-82)||(33639005-33639086)
chr7 (5-82)||(42245186-42245263)
chr7 (5-70)||(42996309-42996374)
chr7 (2-82)||(17477742-17477822)
chr7 (2-82)||(17575392-17575472)
chr7 (2-82)||(33030649-33030729)
chr7 (15-82)||(4481717-4481784)
chr7 (2-82)||(8926221-8926301)
chr7 (2-82)||(42687405-42687485)
chr7 (2-60)||(19521019-19521077)
chr7 (83-144)||(42917822-42917883)
chr7 (2-74)||(5962550-5962622)
chr7 (9-82)||(11499718-11499791)
chr7 (143-209)||(14308941-14309007)
chr7 (9-82)||(17469607-17469680)
chr7 (9-82)||(17583534-17583607)
chr7 (153-209)||(42917920-42917976)
[»] scaffold0051 (2 HSPs)
scaffold0051 (83-209)||(61320-61446)
scaffold0051 (1-82)||(49897-49978)
[»] chr1 (62 HSPs)
chr1 (83-209)||(12714509-12714635)
chr1 (83-213)||(52309866-52309996)
chr1 (83-209)||(12245933-12246059)
chr1 (83-209)||(18814251-18814377)
chr1 (83-209)||(34687619-34687745)
chr1 (83-213)||(51965821-51965951)
chr1 (83-209)||(13662498-13662624)
chr1 (83-209)||(34692147-34692273)
chr1 (83-209)||(41830142-41830267)
chr1 (83-209)||(16031696-16031823)
chr1 (83-214)||(43254772-43254903)
chr1 (83-214)||(50395186-50395317)
chr1 (83-209)||(31619721-31619847)
chr1 (83-209)||(36681276-36681401)
chr1 (83-209)||(41963022-41963148)
chr1 (83-213)||(47135432-47135562)
chr1 (83-209)||(48340361-48340487)
chr1 (84-209)||(52521660-52521785)
chr1 (86-209)||(28565808-28565934)
chr1 (83-214)||(18111618-18111749)
chr1 (83-209)||(17671488-17671614)
chr1 (83-209)||(45004765-45004890)
chr1 (1-82)||(12246154-12246235)
chr1 (102-204)||(15317298-15317400)
chr1 (83-177)||(29840811-29840905)
chr1 (1-82)||(16031918-16031999)
chr1 (83-214)||(24294561-24294692)
chr1 (83-214)||(39760237-39760368)
chr1 (83-193)||(10763414-10763524)
chr1 (83-213)||(50561074-50561202)
chr1 (1-82)||(17671162-17671243)
chr1 (83-183)||(44406407-44406507)
chr1 (1-80)||(52309690-52309769)
chr1 (1-82)||(10763238-10763319)
chr1 (1-74)||(15315106-15315179)
chr1 (1-82)||(18111442-18111523)
chr1 (1-82)||(36681100-36681181)
chr1 (1-82)||(43254998-43255079)
chr1 (1-82)||(50395412-50395493)
chr1 (10-82)||(24294394-24294466)
chr1 (2-82)||(31619546-31619626)
chr1 (83-183)||(38845351-38845451)
chr1 (1-74)||(12714333-12714406)
chr1 (1-74)||(13662727-13662800)
chr1 (1-74)||(28566040-28566113)
chr1 (1-82)||(29841000-29841081)
chr1 (84-193)||(42682419-42682527)
chr1 (1-82)||(45004589-45004670)
chr1 (2-82)||(18814076-18814156)
chr1 (121-205)||(28631382-28631466)
chr1 (2-82)||(34687444-34687524)
chr1 (2-82)||(34691972-34692052)
chr1 (2-82)||(41830362-41830442)
chr1 (2-82)||(48340186-48340266)
chr1 (1-82)||(50560898-50560979)
chr1 (1-82)||(51966046-51966126)
chr1 (2-82)||(38845537-38845617)
chr1 (2-82)||(44406232-44406312)
chr1 (2-82)||(52521881-52521961)
chr1 (2-82)||(41963243-41963323)
chr1 (1-82)||(42682246-42682323)
chr1 (223-308)||(26941330-26941415)
[»] chr3 (62 HSPs)
chr3 (83-209)||(35436862-35436988)
chr3 (83-209)||(8242723-8242849)
chr3 (82-209)||(54793070-54793197)
chr3 (83-209)||(23193491-23193617)
chr3 (83-209)||(52463037-52463163)
chr3 (83-213)||(55294880-55295010)
chr3 (83-209)||(21699678-21699804)
chr3 (83-213)||(40827136-40827266)
chr3 (84-209)||(32755540-32755665)
chr3 (83-209)||(36165115-36165242)
chr3 (83-209)||(16495913-16496039)
chr3 (83-209)||(35087943-35088069)
chr3 (83-209)||(48976707-48976833)
chr3 (83-214)||(39796573-39796704)
chr3 (83-209)||(50741376-50741502)
chr3 (83-209)||(50771352-50771478)
chr3 (83-209)||(54512801-54512927)
chr3 (83-214)||(5252474-5252605)
chr3 (83-214)||(6104227-6104357)
chr3 (83-213)||(11598064-11598195)
chr3 (2-81)||(32755334-32755413)
chr3 (83-209)||(52853549-52853673)
chr3 (83-209)||(31369122-31369248)
chr3 (83-213)||(48521123-48521253)
chr3 (1-82)||(36165337-36165418)
chr3 (83-193)||(22477731-22477841)
chr3 (83-209)||(49113089-49113215)
chr3 (1-82)||(48521348-48521429)
chr3 (1-81)||(2845184-2845264)
chr3 (3-74)||(54512628-54512699)
chr3 (83-193)||(11951096-11951206)
chr3 (4-82)||(23193312-23193390)
chr3 (1-82)||(5252700-5252781)
chr3 (5-82)||(11598290-11598367)
chr3 (1-82)||(39796799-39796880)
chr3 (1-82)||(40827361-40827442)
chr3 (1-74)||(54793299-54793372)
chr3 (5-80)||(8242551-8242626)
chr3 (4-82)||(55295105-55295183)
chr3 (1-74)||(16495737-16495810)
chr3 (2-82)||(6104452-6104532)
chr3 (2-82)||(31369343-31369423)
chr3 (2-82)||(35088164-35088244)
chr3 (2-82)||(48976532-48976612)
chr3 (1-82)||(22477555-22477636)
chr3 (2-82)||(49112923-49113003)
chr3 (2-82)||(50741201-50741281)
chr3 (2-82)||(50771573-50771653)
chr3 (2-82)||(52840859-52840939)
chr3 (86-177)||(11383144-11383235)
chr3 (122-209)||(16341717-16341804)
chr3 (1-80)||(19893699-19893778)
chr3 (1-82)||(52463258-52463339)
chr3 (2-82)||(52853768-52853848)
chr3 (1-80)||(11951303-11951382)
chr3 (83-160)||(51248384-51248461)
chr3 (2-82)||(11325970-11326050)
chr3 (2-82)||(51248209-51248289)
chr3 (2-82)||(21699899-21699977)
chr3 (221-308)||(1202167-1202254)
chr3 (83-123)||(52840724-52840764)
chr3 (39-82)||(11383004-11383047)
[»] chr6 (41 HSPs)
chr6 (83-205)||(4425515-4425637)
chr6 (83-209)||(1073376-1073502)
chr6 (83-209)||(18599099-18599225)
chr6 (83-213)||(33321562-33321692)
chr6 (83-213)||(14831493-14831623)
chr6 (83-209)||(14888051-14888176)
chr6 (83-209)||(25540081-25540207)
chr6 (83-209)||(22373954-22374080)
chr6 (83-209)||(2521172-2521299)
chr6 (83-209)||(17939530-17939656)
chr6 (83-209)||(34855963-34856089)
chr6 (83-195)||(11934807-11934919)
chr6 (83-203)||(15275666-15275786)
chr6 (83-209)||(4424494-4424620)
chr6 (124-209)||(1931987-1932072)
chr6 (83-214)||(13456953-13457083)
chr6 (83-209)||(34321100-34321227)
chr6 (83-194)||(35041116-35041227)
chr6 (83-193)||(18311814-18311924)
chr6 (1-82)||(13457178-13457259)
chr6 (1-82)||(14831317-14831398)
chr6 (2-82)||(14888271-14888351)
chr6 (2-81)||(11935015-11935094)
chr6 (1-82)||(28228845-28228926)
chr6 (1-82)||(33321787-33321868)
chr6 (2-82)||(1073597-1073677)
chr6 (2-82)||(18599320-18599400)
chr6 (2-82)||(35040941-35041021)
chr6 (2-82)||(17939355-17939435)
chr6 (2-82)||(18311640-18311719)
chr6 (2-82)||(22374175-22374255)
chr6 (2-82)||(34855788-34855868)
chr6 (1-82)||(1931865-1931939)
chr6 (122-209)||(30044255-30044342)
chr6 (2-74)||(2520996-2521068)
chr6 (2-82)||(15275491-15275571)
chr6 (1-74)||(34320924-34320997)
chr6 (2-82)||(4424319-4424399)
chr6 (221-308)||(19813245-19813332)
chr6 (221-308)||(32689535-32689622)
chr6 (39-82)||(25539943-25539986)
[»] chr5 (58 HSPs)
chr5 (83-209)||(33929784-33929910)
chr5 (83-213)||(33706878-33707008)
chr5 (83-209)||(41780818-41780944)
chr5 (85-209)||(290543-290663)
chr5 (83-209)||(33611243-33611369)
chr5 (83-209)||(7285667-7285793)
chr5 (83-209)||(30689299-30689425)
chr5 (83-209)||(2195155-2195281)
chr5 (83-209)||(3150707-3150833)
chr5 (83-209)||(3210303-3210429)
chr5 (83-209)||(4882262-4882388)
chr5 (83-213)||(20996043-20996173)
chr5 (83-209)||(26321178-26321304)
chr5 (83-205)||(9702242-9702364)
chr5 (83-209)||(20349913-20350039)
chr5 (83-214)||(19395346-19395477)
chr5 (83-214)||(31295772-31295903)
chr5 (83-205)||(3028744-3028866)
chr5 (83-209)||(3397241-3397367)
chr5 (85-209)||(1852032-1852157)
chr5 (1-82)||(33929608-33929689)
chr5 (83-194)||(17996570-17996681)
chr5 (83-209)||(19447993-19448119)
chr5 (83-201)||(27065862-27065980)
chr5 (83-194)||(20757951-20758062)
chr5 (1-82)||(31295998-31296079)
chr5 (1-82)||(41780642-41780723)
chr5 (2-74)||(20996276-20996348)
chr5 (2-82)||(21029923-21030003)
chr5 (2-82)||(38934292-38934372)
chr5 (83-209)||(21030098-21030225)
chr5 (83-193)||(12588400-12588509)
chr5 (3-72)||(3210534-3210603)
chr5 (5-74)||(9702070-9702139)
chr5 (1-82)||(12588604-12588685)
chr5 (1-82)||(19395170-19395251)
chr5 (2-82)||(3150928-3151008)
chr5 (2-82)||(3397462-3397542)
chr5 (2-82)||(7285492-7285572)
chr5 (2-82)||(17996395-17996475)
chr5 (2-82)||(33611464-33611544)
chr5 (122-209)||(35540022-35540109)
chr5 (83-194)||(38934467-38934578)
chr5 (83-160)||(10513253-10513330)
chr5 (2-82)||(1852254-1852334)
chr5 (2-82)||(10513425-10513505)
chr5 (2-82)||(26321399-26321479)
chr5 (122-209)||(34374483-34374570)
chr5 (2-74)||(2194980-2195052)
chr5 (2-74)||(4882088-4882160)
chr5 (2-82)||(19447818-19447898)
chr5 (2-82)||(20757776-20757856)
chr5 (2-82)||(3028566-3028645)
chr5 (2-74)||(20349738-20349810)
chr5 (2-82)||(30689124-30689204)
chr5 (1-39)||(287341-287379)
chr5 (152-209)||(10512467-10512524)
chr5 (2-82)||(27065715-27065793)
[»] scaffold0016 (1 HSPs)
scaffold0016 (83-209)||(100624-100750)
[»] chr8 (60 HSPs)
chr8 (83-213)||(41977227-41977357)
chr8 (83-212)||(12760243-12760372)
chr8 (83-213)||(6477582-6477712)
chr8 (83-205)||(12250296-12250418)
chr8 (83-209)||(14078923-14079049)
chr8 (83-209)||(29433807-29433933)
chr8 (83-209)||(39204399-39204525)
chr8 (83-205)||(39444789-39444911)
chr8 (83-201)||(41907625-41907743)
chr8 (83-214)||(23966608-23966739)
chr8 (83-200)||(22946904-22947021)
chr8 (83-212)||(41156407-41156536)
chr8 (83-214)||(37029606-37029737)
chr8 (83-209)||(22333214-22333340)
chr8 (83-209)||(38961937-38962063)
chr8 (83-209)||(38992281-38992407)
chr8 (83-209)||(41628659-41628785)
chr8 (83-209)||(45293670-45293796)
chr8 (83-208)||(19395657-19395782)
chr8 (84-209)||(30826220-30826349)
chr8 (83-214)||(6300705-6300836)
chr8 (83-209)||(33424352-33424477)
chr8 (83-214)||(44940210-44940341)
chr8 (91-209)||(42811030-42811148)
chr8 (1-82)||(41907450-41907531)
chr8 (1-73)||(39204223-39204295)
chr8 (83-214)||(42060883-42061013)
chr8 (1-82)||(6300931-6301012)
chr8 (1-82)||(23966834-23966915)
chr8 (1-82)||(37029430-37029511)
chr8 (1-82)||(42061108-42061189)
chr8 (1-82)||(44940034-44940115)
chr8 (1-82)||(12760067-12760148)
chr8 (9-82)||(41156239-41156312)
chr8 (1-82)||(41977051-41977132)
chr8 (2-82)||(14079144-14079224)
chr8 (83-209)||(19247880-19248002)
chr8 (83-209)||(19321064-19321186)
chr8 (2-82)||(23522956-23523036)
chr8 (3-82)||(19395877-19395956)
chr8 (83-194)||(23522750-23522861)
chr8 (83-205)||(23626441-23626563)
chr8 (8-74)||(23626666-23626732)
chr8 (5-70)||(12250520-12250585)
chr8 (1-82)||(19247704-19247785)
chr8 (1-82)||(19320888-19320969)
chr8 (5-82)||(29433635-29433712)
chr8 (5-70)||(39444622-39444687)
chr8 (2-82)||(30826044-30826124)
chr8 (2-82)||(33424572-33424652)
chr8 (122-209)||(38993490-38993577)
chr8 (122-209)||(44599509-44599596)
chr8 (4-82)||(41628486-41628564)
chr8 (2-82)||(22333435-22333515)
chr8 (30-82)||(22947116-22947168)
chr8 (1-82)||(45293891-45293972)
chr8 (2-82)||(42811250-42811330)
chr8 (2-60)||(6477828-6477886)
chr8 (2-82)||(38961768-38961848)
chr8 (2-82)||(38992112-38992192)
[»] scaffold0088 (2 HSPs)
scaffold0088 (83-205)||(53077-53199)
scaffold0088 (23-70)||(53301-53348)
[»] scaffold0079 (2 HSPs)
scaffold0079 (83-213)||(10711-10841)
scaffold0079 (29-82)||(10936-10989)
[»] scaffold0095 (2 HSPs)
scaffold0095 (83-205)||(1358-1480)
scaffold0095 (5-70)||(1191-1256)
[»] scaffold0047 (2 HSPs)
scaffold0047 (83-209)||(26465-26591)
scaffold0047 (2-82)||(26686-26766)
[»] scaffold0006 (4 HSPs)
scaffold0006 (83-209)||(152260-152386)
scaffold0006 (83-209)||(64739-64865)
scaffold0006 (1-71)||(64971-65041)
scaffold0006 (1-74)||(152489-152562)
[»] scaffold0005 (2 HSPs)
scaffold0005 (83-209)||(9952-10078)
scaffold0005 (2-82)||(9777-9857)
[»] scaffold0122 (2 HSPs)
scaffold0122 (83-209)||(442-568)
scaffold0122 (2-82)||(267-347)
[»] scaffold0045 (2 HSPs)
scaffold0045 (83-209)||(13036-13162)
scaffold0045 (1-82)||(13257-13338)
[»] scaffold0171 (2 HSPs)
scaffold0171 (83-208)||(30103-30228)
scaffold0171 (1-82)||(30323-30404)
[»] scaffold0010 (1 HSPs)
scaffold0010 (1-81)||(119888-119968)
[»] scaffold0236 (1 HSPs)
scaffold0236 (83-213)||(26509-26639)
[»] scaffold0385 (2 HSPs)
scaffold0385 (1-82)||(4505-4586)
scaffold0385 (83-183)||(4308-4410)
[»] scaffold0038 (1 HSPs)
scaffold0038 (1-82)||(29343-29424)
[»] scaffold1891 (1 HSPs)
scaffold1891 (83-157)||(41-115)
[»] scaffold0110 (1 HSPs)
scaffold0110 (122-209)||(49340-49427)
[»] scaffold0242 (1 HSPs)
scaffold0242 (122-209)||(3559-3646)


Alignment Details
Target: chr4 (Bit Score: 117; Significance: 1e-59; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 83 - 223
Target Start/End: Complemental strand, 47720315 - 47720175
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||    
T  47720315 cttttcattttgtctgatgtaaatattggaaaaaattcatttttggttagtctacgacacttgcagtctcttttataaatctaactattatgtgatgtta 47720216  T
Q  183 acatgcacattgttggttccttcattgattcatgcaagtat 223  Q
    | |||||||||||||||||||||||||||||||||||||||    
T  47720215 atatgcacattgttggttccttcattgattcatgcaagtat 47720175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 221 - 330
Target Start/End: Original strand, 47853602 - 47853712
Alignment:
Q  221 tatgttggccaaaattcggcaacaaagacgtctcagaaggtcctctgccatagccctcttgaaccactcctacggaaggaggctgtgagcca-atacttc 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  47853602 tatgttggccaaaattcggcaacaaagacgtctcagaaggtcctctgccatagccctcttgaaccactcctacggaaggaggctgtgagctagatacttc 47853701  T
Q  320 ctttgatgatg 330  Q
    |||||||||||    
T  47853702 ctttgatgatg 47853712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 221 - 330
Target Start/End: Complemental strand, 47720142 - 47720032
Alignment:
Q  221 tatgttggccaaaattcggcaacaaagacgtctcagaaggtcctctgccatagccctcttgaaccactcctacggaaggaggctgtgagcca-atacttc 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||    
T  47720142 tatgttggccaaaattcggcaacaaagacgtctcagaaggtcctctgccatagccctcttgaaccactcctacagaaggaggttgtgagccagatacttc 47720043  T
Q  320 ctttgatgatg 330  Q
    |||||||||||    
T  47720042 ctttgatgatg 47720032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 83 - 208
Target Start/End: Original strand, 40622190 - 40622315
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||| ||||    
T  40622190 cttttcattttgtctgatgtaaatattggcaaaaatccctttttggttagtctatgacacttgcagtcttttttataaacctaactattatgtaacgtta 40622289  T
Q  183 acatgcacattgttggttccttcatt 208  Q
    | ||||||||||||||||| ||||||    
T  40622290 atatgcacattgttggttcattcatt 40622315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 83 - 213
Target Start/End: Original strand, 8530859 - 8530989
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||| ||||||  |||||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||    
T  8530859 cttttcattttgtctgatgtacatattgacaaaaatccctttttggttagtctatgacacttgcagtcttttttataaacctaactattatgtaatgtta 8530958  T
Q  183 acatgcacattgttggttccttcattgattc 213  Q
    |  |||||||||||| |||||||||||||||    
T  8530959 atctgcacattgttgattccttcattgattc 8530989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 83 - 213
Target Start/End: Original strand, 13628095 - 13628225
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||  ||||||| || |||||||||| ||||||||||||||| ||||    
T  13628095 cttttcattttgtctaatgtaaatattggcaaaaattcctttttggttagtctatgaaacttgcaatcacttttataaacctaactattatgtaacgtta 13628194  T
Q  183 acatgcacattgttggttccttcattgattc 213  Q
    |  ||||||||||||||||||||||||||||    
T  13628195 atttgcacattgttggttccttcattgattc 13628225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 83 - 213
Target Start/End: Complemental strand, 47557671 - 47557541
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||| ||||||||| || ||| |||||||| ||||    
T  47557671 cttttcattttgtctgatgtaaatattggcaaaaatccctttttggttagtctatgacacttgcagtcttttttataaacctgactgttatgtaacgtta 47557572  T
Q  183 acatgcacattgttggttccttcattgattc 213  Q
    |  ||||||||||||||||||||||||||||    
T  47557571 atctgcacattgttggttccttcattgattc 47557541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 83 - 214
Target Start/End: Complemental strand, 37701845 - 37701714
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||  |||||| |||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  37701845 cttttcattttgtctgatgtaaatattgaaaaaaatccctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 37701746  T
Q  183 acatgcacattgttggttccttcattgattca 214  Q
    |  |||||||||||||||||||||||| ||||    
T  37701745 atctgcacattgttggttccttcattggttca 37701714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 5272521 - 5272395
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  5272521 cttttcattttgtctgatgtaagtattggcaaaaattcctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 5272422  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  || |||||||||||||||||||||    
T  5272421 atctgtacattgttggttccttcattg 5272395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 83 - 205
Target Start/End: Complemental strand, 26870535 - 26870413
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||| ||||||||||||||||| |||||| ||||||| ||||||||||| |||||| ||||||||||||||| ||||||||||||||| ||||    
T  26870535 cttttcattttatctgatgtaaatattggcaaaaatcccttttttgttagtctatgacacttgtagtctcttttataaacctaactattatgtaacgtta 26870436  T
Q  183 acatgcacattgttggttccttc 205  Q
    | |||||||||||||||||||||    
T  26870435 atatgcacattgttggttccttc 26870413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 33503244 - 33503117
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcc-tttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtt 181  Q
    ||||||||||||||||||||||||||||| ||||| ||| ||||| ||||||||||| |||||||| ||||||||||||| ||||||||||||||| |||    
T  33503244 cttttcattttgtctgatgtaaatattggaaaaaaatccctttttcgttagtctatgacacttgcaatctcttttataaacctaactattatgtaacgtt 33503145  T
Q  182 aacatgcacattgttggttccttcattg 209  Q
    ||  ||||||||||||||||||||||||    
T  33503144 aatctgcacattgttggttccttcattg 33503117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 1944535 - 1944661
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||  |||||| |||||||||||||| |||| ||||| |||||||||||||||| ||||||||||||||| ||||    
T  1944535 cttttcattttgtctgatgtaaatattgacaaaaatccctttttggttagtttatgacacttacagtctcttttataaacctaactattatgtaacgtta 1944634  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  |||||||||||||||| |||||||    
T  1944635 atctgcacattgttggttctttcattg 1944661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 7644038 - 7643912
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||  ||||||| ||||||||||| | ||||||||||||||| ||||    
T  7644038 cttttcattttgtctgatgtaaatattggcaaaacttccgttttggttagtctatgaaacttgcaatctcttttatagacctaactattatgtaacgtta 7643939  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||||||||||||    
T  7643938 atctgcacattgttggttccttcattg 7643912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 14829757 - 14829631
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  14829757 cttttcattttgtctgatgtaagtattggcaaaaattcctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 14829658  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  || |||||||||||| ||||||||    
T  14829657 atctgtacattgttggtttcttcattg 14829631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 23478953 - 23479079
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  23478953 cttttcattttgtctgatgtaagtattggcaaaaattcccttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 23479052  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  || |||||||||||||||||||||    
T  23479053 atctgtacattgttggttccttcattg 23479079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 34056809 - 34056683
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  34056809 cttttcattttgtctgatgtaagtattggcaaaaattcctttttggttaatctatgaaacttgcaatctcttttataaaactaactattatgtaacgtta 34056710  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  || |||||||||||||||||||||    
T  34056709 atctgtacattgttggttccttcattg 34056683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 38007887 - 38008013
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  38007887 cttttcattttgtctgatgtaaatattggcaaaaattcctttttggttagcctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 38007986  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||  ||||||||||||||||||||    
T  38007987 atctgttcattgttggttccttcattg 38008013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 41984479 - 41984353
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||| |||||| | ||||||||||||||||| |||||| |||||||||||||||  |||||||||||||| ||||    
T  41984479 cttttcattttgtctgatgtaaatattggcaaaaatccttttttggttagtctatgacacttgtagtctcttttataaacttaactattatgtaacgtta 41984380  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||| ||||||||    
T  41984379 atctgcacattgttggtttcttcattg 41984353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 83 - 214
Target Start/End: Complemental strand, 740656 - 740525
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||| ||||||  |||||| |||||||| || |||||| ||||||||||||||| ||||||||||||||| ||||    
T  740656 cttttcattttgtctgatgtaaatattggcaaaaatctctttttagttagtctttgacacttggagtctcttttataaacctaactattatgtaacgtta 740557  T
Q  183 acatgcacattgttggttccttcattgattca 214  Q
    |  |||||||| ||||||||||||||| ||||    
T  740556 atctgcacattattggttccttcattggttca 740525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 83 - 214
Target Start/End: Original strand, 15520759 - 15520890
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||  ||||||  |||||| |||||||| || |||||| ||||||||||||||| ||||||||||||||| ||||    
T  15520759 cttttcattttgtctgatgtaaatattgacaaaaatctctttttagttagtctttgacacttggagtctcttttataaacctaactattatgtaacgtta 15520858  T
Q  183 acatgcacattgttggttccttcattgattca 214  Q
    |  |||||||||||||||||||||||| ||||    
T  15520859 atctgcacattgttggttccttcattggttca 15520890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 83 - 214
Target Start/End: Complemental strand, 35495789 - 35495658
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||  |||||| |||||||||||||| ||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  35495789 cttttcattttgtctgatgtaaatattgacaaaaatacctttttggttagtatatgaaacttgcaatctcttttataaacctaactattatgtaaagtta 35495690  T
Q  183 acatgcacattgttggttccttcattgattca 214  Q
    |  |||||||  ||||||||||||||||||||    
T  35495689 atctgcacataattggttccttcattgattca 35495658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 83 - 208
Target Start/End: Original strand, 53342452 - 53342577
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||| | |||||| |||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  53342452 cttttcattttgtctgatgtaaatattagcaaaaatccctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 53342551  T
Q  183 acatgcacattgttggttccttcatt 208  Q
    |  || ||||||||| ||||||||||    
T  53342552 atttgtacattgttgattccttcatt 53342577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 98 - 209
Target Start/End: Complemental strand, 3839596 - 3839485
Alignment:
Q  98 gatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaacatgcacattgttg 197  Q
    |||||||||||||| ||||||||||||||||||||||||||   |||||| ||||||||||||| ||||||||||||||| |||||  ||||||||||||    
T  3839596 gatgtaaatattggcaaaaattcctttttggttagtctatgattcttgcaatctcttttataaacctaactattatgtaacgttaatctgcacattgttg 3839497  T
Q  198 gttccttcattg 209  Q
    ||||||||||||    
T  3839496 gttccttcattg 3839485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 83 - 213
Target Start/End: Original strand, 17740083 - 17740213
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||| | ||||| ||||||||  |||||| ||||||||||||||||||| |||||| ||||| ||||||||| ||||||||| ||||| ||||    
T  17740083 cttttcattttatttgatgcaaatattgacaaaaatccctttttggttagtctatgacacttgtagtcttttttataaacctaactattttgtaacgtta 17740182  T
Q  183 acatgcacattgttggttccttcattgattc 213  Q
    |  ||||||||||||||||||||||||||||    
T  17740183 atctgcacattgttggttccttcattgattc 17740213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 54331889 - 54331763
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||||||||| |||||| |||||| | |||||||||||||||||  ||||||| ||||||||||||| ||||| |||| |||| ||||    
T  54331889 cttttcattttgtctgatgtaagtattggcaaaaatccatttttggttagtctatgaaacttgcaatctcttttataaacctaacaattacgtaacgtta 54331790  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||||||||||||    
T  54331789 atctgcacattgttggttccttcattg 54331763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 19831643 - 19831517
Alignment:
Q  83 cttttcattttgtct-gatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtt 181  Q
    ||||| ||||||||| |||||||||||||  ||||||| ||||||||||||||||||  ||||||| |||||||||| || |||||||||||||||||||    
T  19831643 ctttttattttgtcttgatgtaaatattgacaaaaatttctttttggttagtctatgaaacttgcaatctcttttat-aacctaactattatgtaatgtt 19831545  T
Q  182 aacatgcacattgttggttccttcattg 209  Q
    ||  ||||||||||||||||||||||||    
T  19831544 aatctgcacattgttggttccttcattg 19831517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 39742992 - 39742866
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||| |||||||| | |||||||||| |||||| ||||||||||||||| |||  ||||||| ||||||||||||| || |||||||||||| ||||    
T  39742992 cttttcagtttgtctggtataaatattggcaaaaatccctttttggttagtcaatgaaacttgcaatctcttttataaacctgactattatgtaacgtta 39742893  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||||||||||||    
T  39742892 atctgcacattgttggttccttcattg 39742866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 193
Target Start/End: Complemental strand, 53991493 - 53991383
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||| ||||||||||||||| | |||||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||| ||||    
T  53991493 cttttcattttatctgatgtaaatattagcaaaaatccctttttggttagtctatgacacttgcagtcttttttataaacctaactattatgtaacgtta 53991394  T
Q  183 acatgcacatt 193  Q
    |  ||||||||    
T  53991393 atctgcacatt 53991383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 83 - 196
Target Start/End: Original strand, 21353142 - 21353255
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||| ||||||||||||| |||||| ||||||||||||||| |||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  21353142 cttttcattttgtctaatgtaaatattggcaaaaatccctttttggttagtcaatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 21353241  T
Q  183 acatgcacattgtt 196  Q
    |  |||||||||||    
T  21353242 atctgcacattgtt 21353255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 47720491 - 47720410
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  47720491 tgtgatggaagaaggtggtaagcttatctttgatctcgaaaagtcatcaaagaacttgcacgttcgagttgttcaaaagtag 47720410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 83 - 193
Target Start/End: Complemental strand, 35707874 - 35707764
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||| ||||||||||||||| | |||||| ||||||||||| ||||||| |||||||||||| ||||||||| ||||||||||||||| ||||    
T  35707874 cttttcattttatctgatgtaaatattagcaaaaatccctttttggttggtctatgacacttgcagtcttttttataaacctaactattatgtaacgtta 35707775  T
Q  183 acatgcacatt 193  Q
    |  ||||||||    
T  35707774 atctgcacatt 35707764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 84 - 209
Target Start/End: Complemental strand, 28135309 - 28135185
Alignment:
Q  84 ttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaa 183  Q
    |||||||| |||||| |||||||||||| |||||| |||||| ||||||| ||||  ||||||| ||||||||||||| ||||||||||||||| |||||    
T  28135309 ttttcattgtgtctggtgtaaatattggcaaaaatccctttt-ggttagtttatgaaacttgcaatctcttttataaacctaactattatgtaacgttaa 28135211  T
Q  184 catgcacattgttggttccttcattg 209  Q
      |||||||||||||||| |||||||    
T  28135210 tctgcacattgttggttctttcattg 28135185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 1944359 - 1944429
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttg 71  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  1944359 tgtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcatcgaagaacttgcacgtttgagttg 1944429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 205
Target Start/End: Original strand, 36857131 - 36857252
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||| |||||| |||||| ||||||  ||||||||||||||||||  |||| || ||||||||||||| ||||||||||||||| ||||    
T  36857131 cttttcattttgtctaatgtaagtattggcaaaaatctctttttggttagtctatgaaacttacaatctcttttataaacctaactattatgtaacgtta 36857230  T
Q  183 acatgcacattgttggttccttc 205  Q
    |  | ||||||||||||||||||    
T  36857231 a-tttcacattgttggttccttc 36857252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 55998943 - 55998817
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||  |||||||||||  |||||| |||||||||||||| ||||  ||||||| |||||||||||||  |||||||||||| |  |||    
T  55998943 cttttcattttgtctagtgtaaatattgacaaaaatccctttttggttagtatatgaaacttgcaatctcttttataaacttaactattatgttaaatta 55998844  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||||||||||||    
T  55998843 atctgcacattgttggttccttcattg 55998817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 15520583 - 15520664
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  15520583 tgtgatgatagaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagtag 15520664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 740832 - 740752
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagta 81  Q
    |||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  740832 tgtgatgatagaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagta 740752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 17739906 - 17739986
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagta 81  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||| ||||||||||||| ||||||    
T  17739906 tgtgatggaagaaggtggtaagctcatatttgatctggaaaagtcaccgaagaacatgcatgttcgagttgttccaaagta 17739986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 22116461 - 22116381
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  22116461 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 22116381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 17699219 - 17699346
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcc-tttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtt 181  Q
    |||||||||||||||| | |||||||||  |||||  || |||||||||||||||||  ||||||| |||||||||||||  |||||||||||||| |||    
T  17699219 cttttcattttgtctggtttaaatattgataaaaaaaccctttttggttagtctatgaaacttgcaatctcttttataaacataactattatgtaacgtt 17699318  T
Q  182 aacatgcacattgttggttccttcattg 209  Q
    ||  |||||||| |||||||||||||||    
T  17699319 aatctgcacatttttggttccttcattg 17699346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 19831818 - 19831739
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagta 81  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||  |||||||||||| ||||||    
T  19831818 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagta 19831739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 83 - 193
Target Start/End: Complemental strand, 574393 - 574283
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||| |||||||||||||||   |||||||||||||| ||||||||||| |||||||||||| ||  ||||| ||||||||||||||| ||||    
T  574393 cttttcattttatctgatgtaaatattatcaaaaattcctttttagttagtctatgacacttgcagtcttttaaataaacctaactattatgtaacgtta 574294  T
Q  183 acatgcacatt 193  Q
    |  ||||||||    
T  574293 atctgcacatt 574283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 574569 - 574488
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||||||||||||| |||||| ||||||| ||| ||||||||||||| ||||||||||||| |||||||    
T  574569 tgtgatggaagaaggtggtaagctcatctttgatttcgaaaaatcaccgaagaacttgcatgttcgagttgttccaaagtag 574488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 35708050 - 35707969
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||| |||||| |||||| ||||||||||| ||||||||||||| ||||||||||||| |||||||    
T  35708050 tgtgatggaagaaggtggtatgctcatctttgatttcgaaaagtcaccgaagaacttgcatgttcgagttgttccaaagtag 35707969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 40622015 - 40622095
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||| ||||||||||||| |||||||    
T  40622015 tgtgatggaagaaggtggtaa-ctcatctttgatctcgaaaagtcaccgaagaacttgcatgttcgagttgttccaaagtag 40622095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 2776160 - 2776240
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||  |||||||||||| |||||||    
T  2776160 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcacagaagaaattgcaaattcgagttgttccaaagtag 2776240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 2776335 - 2776435
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||| ||||||||||||| |||||| |||||||| |||||| |||  ||||||| ||||||||||||| ||||||||| ||||| ||||    
T  2776335 cttttcattttgtctaatgtaaatattggcaaaaatccctttttgattagtcaatgaaacttgcaatctcttttataaacctaactattttgtaacgtta 2776434  T
Q  183 a 183  Q
    |    
T  2776435 a 2776435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 34056984 - 34056904
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  34056984 gtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 34056904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 35495964 - 35495884
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||  ||||||||||||  ||||||||||||||||||||    
T  35495964 gtgatggaagaaggtggtaaactcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttcaaaagtag 35495884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 37702020 - 37701940
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  37702020 gtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 37701940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 38007712 - 38007792
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  38007712 gtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 38007792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 3839793 - 3839712
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||||||||||||| |||||||| ||||| ||| |||| ||||| |||||||||||||||| |||||||    
T  3839793 tgtgatggaagaaggtggtaagctcatctttgatctggaaaattcaccgaaaaacttccacgttcgagttgttccaaagtag 3839712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 8530697 - 8530778
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||| |||||||| |||| |||||||||||||| ||| ||||||||||||| ||||||||||||| |||||||    
T  8530697 tgtgatggaagaaagtggtaagttcatctttgatctcgaaaattcaccgaagaacttgcatgttcgagttgttccaaagtag 8530778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 7644213 - 7644133
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  7644213 gtgatggaagaaggtggtaaactcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 7644133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 14829932 - 14829852
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||| |||||||||||||||||| ||||||||| ||||||||  |||||||||||| ||||||||||||| |||||||    
T  14829932 gtgatgggagaaggtggtaagctcatctttgatctcaaaaagtcacagaagaacttgcaagttcgagttgttccaaagtag 14829852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 23478778 - 23478858
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||| ||||||||||||||||||   |||||||||||  |||||||||||| |||||||    
T  23478778 gtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacaaaagaacttgcaaattcgagttgttccaaagtag 23478858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 54332064 - 54331984
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||  ||||||||||||  |||||||||||| |||||||    
T  54332064 gtgatggaagaaggtggtaagctcatctttgatctcaaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 54331984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 55999118 - 55999038
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  55999118 gtgatagaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 55999038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 5272695 - 5272616
Alignment:
Q  3 tgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||||||||||| |||||||||||||||||   ||||||||||||  |||||||||||| |||||||    
T  5272695 tgatggaagaaggtggtaagctcatctttgatctcgaaaagtcgcagaagaacttgcaaattcgagttgttccaaagtag 5272616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 122 - 209
Target Start/End: Original strand, 28973144 - 28973231
Alignment:
Q  122 tttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaacatgcacattgttggttccttcattg 209  Q
    ||||| ||||||||||   ||||||| ||||||||||||| ||||||||||||||| |||||  ||||||||||||||||||||||||    
T  28973144 tttttagttagtctattaaacttgcaatctcttttataaacctaactattatgtaacgttaatctgcacattgttggttccttcattg 28973231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 21352974 - 21353047
Alignment:
Q  9 aagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||| ||||||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  21352974 aagaaggtggtaagcccatatttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 21353047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 26870702 - 26870637
Alignment:
Q  5 atggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagtt 70  Q
    ||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||| ||||||||    
T  26870702 atggaagaaggtggtaagctcatctttgatctcgaaaagtcactgaagaacttgcacattcgagtt 26870637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 41984655 - 41984574
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||| |||||||||| ||||||||||  ||||||| ||||||||| ||| ||||||||||||||||||||||| |||||||    
T  41984655 tgtgaaggaagaaggtagtaagctcatcattgatcttgaaaagtcaccgatgaacttgcacgttcgagttgttccaaagtag 41984574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 28135487 - 28135407
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||  ||||||||| ||  |||||||||||| |||||||    
T  28135487 gtgatggaagaagttggtaagctcatctttgatctcgaaaagtcacagaagaacttacaaattcgagttgttccaaagtag 28135407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 53342276 - 53342356
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||| ||||||||||| ||||||||||| ||||||  ||||||||||||  |||||||||||| |||||||    
T  53342276 gtgatggaagaaggaggtaagctcatctttgatctcgagaagtcacagaagaacttgcaaattcgagttgttccaaagtag 53342356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 13627920 - 13627992
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 74  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||  |||||||||| |  ||||||||||||    
T  13627920 gtgatggaagaaggtggtaagctcatctttgatctcgaaaagacacagaagaacttgaaaattcgagttgttc 13627992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 33503419 - 33503339
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||| ||||||||| |||||| |||||||||||   |||||||||||  |||||||||||| |||||||    
T  33503419 gtgatggaagaaggtgataagctcatctttgatttcgaaaagtcacataagaacttgcaaattcgagttgttccaaagtag 33503339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 36856956 - 36857036
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||| ||||||||||||| |||||| |||||||||||   |||||||||||  |||||||||||| |||||||    
T  36856956 gtgatggaagaaagtggtaagctcatctttgatatcgaaaagtcacaaaagaacttgcaaattcgagttgttccaaagtag 36857036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 17699044 - 17699124
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||| ||||||||| |||||||||| ||||||||||||||||||  ||| |||| |||  |||||||||||| |||||||    
T  17699044 gtgatagaagaaggtagtaagctcatctttgatctcgaaaagtcacagaaaaactagcaaattcgagttgttccaaagtag 17699124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 39743163 - 39743087
Alignment:
Q  6 tggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||| ||||||||||||||||||   |||||||||||  ||  |||||||| |||||||    
T  39743163 tggaagaaggtggtaagctcatctttgatctcgaaaagtcacaaaagaacttgcaaatttaagttgttccaaagtag 39743087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 22116286 - 22116171
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtc----tcttttataaatctaactattatgtaat 178  Q
    ||||||||||||||| ||||||||||||| |||||  ||||||||||||||| |||  ||||||| ||    | |||| | || |||||||||||||||     
T  22116286 cttttcattttgtctaatgtaaatattggcaaaaacccctttttggttagtcaatgaaacttgcaatcccttttttttttgaacctaactattatgtaac 22116187  T
Q  179 gttaacatgcacattg 194  Q
    |||||  |||||||||    
T  22116186 gttaatctgcacattg 22116171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 111; Significance: 6e-56; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 14753241 - 14753366
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  14753241 cttttcattttgtctgatgtaaatattgggaaaaattc-tttttggttagtctatgacacttgcagtctcttttataaatctaactattatgtaatgtta 14753339  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    | |||||||||||||||||||||||||    
T  14753340 atatgcacattgttggttccttcattg 14753366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 35286573 - 35286447
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||  |||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||    
T  35286573 cttttcattttgtctgatgtaaatattgacaaaaatccctttttggttagtctatgacacttgcattctcttttataaatctaactattatgtaacgtta 35286474  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||||||||||||    
T  35286473 atctgcacattgttggttccttcattg 35286447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 83 - 213
Target Start/End: Complemental strand, 18092955 - 18092825
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||| | | ||||||||| ||||||||||||||| ||||    
T  18092955 cttttcattttgtctgatgtaaatattggcaaaaatccctttttggttagtctatgacacttgcaatattttttataaacctaactattatgtaacgtta 18092856  T
Q  183 acatgcacattgttggttccttcattgattc 213  Q
    |  ||||||||||||||||||||||||||||    
T  18092855 atctgcacattgttggttccttcattgattc 18092825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 83 - 213
Target Start/End: Complemental strand, 1515223 - 1515093
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||| |||||| |||||||| |||||||||| | ||| |||||| ||||||||| |||||| |||| ||||||||    
T  1515223 cttttcattttgtctgatgtaaatattggcaaaaatccctttttgattagtctatgactcttacagtcttttttataaacctaactgttatttaatgtta 1515124  T
Q  183 acatgcacattgttggttccttcattgattc 213  Q
    | |||||||||||||||||||||||||||||    
T  1515123 atatgcacattgttggttccttcattgattc 1515093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 16724582 - 16724456
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  16724582 cttttcattttgtctgatgtaagtattggcaaaaattcctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 16724483  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  || |||||||||||||||||||||    
T  16724482 atctgtacattgttggttccttcattg 16724456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 28380236 - 28380110
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||| ||||||| ||||||||||||| |||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  28380236 cttttcactttgtctaatgtaaatattggcaaaaatccttttttggttagtctatgacacttgcagtctcttttataaatctaactattatgtaacgtta 28380137  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  |||||||||||||||| |||||||    
T  28380136 atctgcacattgttggttcattcattg 28380110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 45398801 - 45398927
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||| ||||||| ||||||||||||| |||||||| |||||| |||||||||| |||||||||||||||||||||| ||||||||||||||| ||||    
T  45398801 cttttcactttgtctaatgtaaatattggcaaaaattcttttttgattagtctatgacacttgcagtctcttttataaacctaactattatgtaacgtta 45398900  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||||||||||||    
T  45398901 atctgcacattgttggttccttcattg 45398927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 4811607 - 4811733
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||| ||||| ||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||| |||  |||||||||| ||||    
T  4811607 cttttcattttgtctaatgtagatattggcaaaaatccctttttggttagtctatgacacttgcagtctcttttataaacctatttattatgtaacgtta 4811706  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||||||||||||    
T  4811707 atctgcacattgttggttccttcattg 4811733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 21097758 - 21097884
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||||||||| |||||  ||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  21097758 cttttcattttgtctgatgtaagtattgacaaaaattcctttttggttagtctatgaaacttgcaatctcttttataaaactaactattatgtaacgtta 21097857  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  || |||||||||||||||||||||    
T  21097858 atctgtacattgttggttccttcattg 21097884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 45205251 - 45205125
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||  |||||| ||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||| |||     
T  45205251 cttttcattttgtctgatgtaaatattgacaaaaatacctttttggttagtctatgacacttgcagtctcttttataaacctaattattatgtaacgttg 45205152  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  |||||||| |||||||||||||||    
T  45205151 atctgcacattattggttccttcattg 45205125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 83 - 208
Target Start/End: Complemental strand, 10821437 - 10821312
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||  |||||| |||||||||||||| |||| |||||| ||||||||||||||| ||||||||||||||  ||||    
T  10821437 cttttcattttgtctgatgtaaatattgacaaaaatccctttttggttagtttatgacacttgaagtctcttttataaacctaactattatgtagcgtta 10821338  T
Q  183 acatgcacattgttggttccttcatt 208  Q
    |  |||||||||||||||||||||||    
T  10821337 atctgcacattgttggttccttcatt 10821312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 83 - 214
Target Start/End: Complemental strand, 6343076 - 6342945
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||| ||||||  |||||| |||||||| || |||||| ||||||||||||||| ||||||||||||||| ||||    
T  6343076 cttttcattttgtctgatgtaaatattggcaaaaatctctttttagttagtctttgacacttggagtctcttttataaacctaactattatgtaacgtta 6342977  T
Q  183 acatgcacattgttggttccttcattgattca 214  Q
    |  | |||||||||||||||||||||| ||||    
T  6342976 atctacacattgttggttccttcattggttca 6342945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 83 - 214
Target Start/End: Complemental strand, 14323560 - 14323429
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||| ||||||  |||||| |||||||| || |||||| ||||||||||||||| ||||||||||||||| ||||    
T  14323560 cttttcattttgtctgatgtaaatattggcaaaaatctctttttagttagtctttgacacttggagtctcttttataaacctaactattatgtaacgtta 14323461  T
Q  183 acatgcacattgttggttccttcattgattca 214  Q
    |  |||| ||| ||||||||||||||| ||||    
T  14323460 atctgcatattattggttccttcattggttca 14323429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 83 - 214
Target Start/End: Original strand, 28502210 - 28502341
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||  ||||||  |||||| |||||||| || |||||| ||||||||||||||| ||||||||||||||| ||||    
T  28502210 cttttcattttgtctgatgtaaatattgacaaaaatctctttttagttagtctttgacacttggagtctcttttataaacctaactattatgtaacgtta 28502309  T
Q  183 acatgcacattgttggttccttcattgattca 214  Q
    |  ||||||||||||||||||| |||| ||||    
T  28502310 atctgcacattgttggttcctttattggttca 28502341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 83 - 205
Target Start/End: Original strand, 17091836 - 17091958
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||| ||||||||||||||||| |||||| ||||||| ||||||||||| |||||| | ||||||||||||| ||||||||||| ||| ||||    
T  17091836 cttttcattttatctgatgtaaatattggcaaaaatcccttttttgttagtctatgacacttgaaatctcttttataaacctaactattatataacgtta 17091935  T
Q  183 acatgcacattgttggttccttc 205  Q
    |  ||||||||||||||||||||    
T  17091936 atctgcacattgttggttccttc 17091958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 26821679 - 26821805
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||||||||| |||||| |||||||| |||||||||||||||||  ||||||| ||||||||||||| | ||| ||||||||| ||||    
T  26821679 cttttcattttgtctgatgtaagtattggcaaaaattcatttttggttagtctatgaaacttgcaatctcttttataaaccaaacaattatgtaacgtta 26821778  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  | ||||||||||||||||||||||    
T  26821779 atctacacattgttggttccttcattg 26821805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 14753066 - 14753145
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagta 81  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14753066 gtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttccaaagta 14753145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 83 - 205
Target Start/End: Original strand, 17025651 - 17025773
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||| ||||||||||||||||| |||||| ||||||| ||||||||||| |||||| | ||| ||||||||| ||||||||||| ||| ||||    
T  17025651 cttttcattttatctgatgtaaatattggcaaaaatcccttttttgttagtctatgacacttgtaatctnttttataaacctaactattatataacgtta 17025750  T
Q  183 acatgcacattgttggttccttc 205  Q
    |  ||||||||||||||||||||    
T  17025751 atctgcacattgttggttccttc 17025773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 90 - 209
Target Start/End: Complemental strand, 33664020 - 33663901
Alignment:
Q  90 ttttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaacatgca 189  Q
    |||| ||||||||||||||||| |||||| |||||||||||||||||||  ||||| | ||||||||||||| ||||||||||||||| |||||  ||||    
T  33664020 ttttttctgatgtaaatattggcaaaaatccctttttggttagtctatgaaacttgtaatctcttttataaacctaactattatgtaacgttaatctgca 33663921  T
Q  190 cattgttggttccttcattg 209  Q
    |||||||||||| |||||||    
T  33663920 cattgttggttcattcattg 33663901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 193
Target Start/End: Complemental strand, 9916922 - 9916812
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||| ||||||||||||||| | ||||||  |||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||    
T  9916922 cttttcattttatctgatgtaaatattagcaaaaatctctttttggttagtctatgacacttgcagtcttttttataaacctaactattatgtaatgtta 9916823  T
Q  183 acatgcacatt 193  Q
    |  ||||||||    
T  9916822 atctgcacatt 9916812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 205
Target Start/End: Original strand, 17037328 - 17037450
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||| ||||||||||||||||| |||||| ||||||| ||||||||||| |||||| | ||| ||||||||| ||||||||||| ||| ||||    
T  17037328 cttttcattttatctgatgtaaatattggcaaaaatcccttttttgttagtctatgacacttgtaatctattttataaacctaactattatataacgtta 17037427  T
Q  183 acatgcacattgttggttccttc 205  Q
    |  ||||||||||||||||||||    
T  17037428 atctgcacattgttggttccttc 17037450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 30567098 - 30566972
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||  ||||| |||||||||||| ||||||  ||||||||||||||||||  ||||||| ||||||||||||| | ||||||||||||| ||||    
T  30567098 cttttcattgcgtctggtgtaaatattggcaaaaatctctttttggttagtctatgaaacttgcaatctcttttataaacccaactattatgtaacgtta 30566999  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||||||||||||    
T  30566998 atctgcacattgttggttccttcattg 30566972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 30570783 - 30570657
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||  ||||| |||||||||||| ||||||  ||||||||||||||||||  ||||||| ||||||||||||| | ||||||||||||| ||||    
T  30570783 cttttcattgcgtctggtgtaaatattggcaaaaatctctttttggttagtctatgaaacttgcaatctcttttataaacccaactattatgtaacgtta 30570684  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||||||||||||    
T  30570683 atctgcacattgttggttccttcattg 30570657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 19167876 - 19167748
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaa--ttcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgt 180  Q
    |||||||||||||||| |||||||||||| |||||  | ||||||| |||||||||||  ||||||| ||||||||||||| ||||||||||||||  ||    
T  19167876 cttttcattttgtctggtgtaaatattggaaaaaaaatcccttttttgttagtctatgaaacttgcaatctcttttataaacctaactattatgtatcgt 19167777  T
Q  181 taacatgcacattgttggttccttcattg 209  Q
    |||  ||||||||||||||||||||||||    
T  19167776 taatctgcacattgttggttccttcattg 19167748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 35286749 - 35286668
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  35286749 tgtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacggaagaacttgcacgttcgagttgttcaaaagtag 35286668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 10821613 - 10821540
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 74  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  10821613 tgtgatggaagaaggtggtaagttcatctttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 10821540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 84 - 213
Target Start/End: Complemental strand, 36633318 - 36633189
Alignment:
Q  84 ttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaa 183  Q
    |||||||| |||||||||||| |||||| |||||| | |||||||||| ||| || ||||| || ||||||||||||| ||||||| ||| ||| |||||    
T  36633318 ttttcattctgtctgatgtaagtattggcaaaaatccatttttggttaatctttgacacttacaatctcttttataaacctaactactatataacgttaa 36633219  T
Q  184 catgcacattgttggttccttcattgattc 213  Q
      ||||||||||||||||||||||||||||    
T  36633218 tctgcacattgttggttccttcattgattc 36633189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 201
Target Start/End: Complemental strand, 1993288 - 1993171
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||| ||||||||||||| ||||||  |||||| |||||||| || |||||| ||||||||||||||| ||||||||||||||| ||||    
T  1993288 cttttcattttgtct-atgtaaatattggcaaaaatctctttttagttagtctttgacacttggagtctcttttataaacctaactattatgtaacgtta 1993190  T
Q  183 acatgcacattgttggttc 201  Q
    |  |||||||| |||||||    
T  1993189 atctgcacattattggttc 1993171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 4811434 - 4811512
Alignment:
Q  4 gatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  4811434 gatggaagaaggtggtaagctcatctctgatctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagtag 4811512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 1993464 - 1993383
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  1993464 tgtgatgatagaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagtag 1993383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 6343252 - 6343171
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  6343252 tgtgatgatagaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagtag 6343171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 9917098 - 9917017
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||| ||||||||||||| |||||||    
T  9917098 tgtgatggaagaaggtggtaagctcatctttgatttcgaaaagtcaccgaagaacttgcatgttcgagttgttccaaagtag 9917017  T

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Target: chr2; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 16883807 - 16883880
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 74  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||    
T  16883807 tgtgatggaagaaggtggtaagctcatctttgatctcggaaagtcaccgaagaacttgcacgttcgagttgttc 16883880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 17025479 - 17025548
Alignment:
Q  5 atggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 74  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  17025479 atggaagaaggtggtaagctcatctttgatctcgaaaagtcaccgaagaacttgcacgttcgagttgttc 17025548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 17037156 - 17037225
Alignment:
Q  5 atggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 74  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  17037156 atggaagaaggtggtaagctcatctttgatctcgaaaagtcaccgaagaacttgcacgttcgagttgttc 17037225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 17041497 - 17041570
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 74  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||    
T  17041497 tgtgatggaagaaggtggtaagctcatctttgatctcggaaagtcaccgaagaacttgcacgttcgagttgttc 17041570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 17091664 - 17091733
Alignment:
Q  5 atggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 74  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  17091664 atggaagaaggtggtaagctcatctttgatctcgaaaagtcaccgaagaacttgcacgttcgagttgttc 17091733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 28380412 - 28380331
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||| |||||  |||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  28380412 tgtgatggaagaaggtggtacgctcaactttgatctcgaaaagtcaccgaagaacttgcacgttcgagttgttccaaagtag 28380331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 28502034 - 28502115
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  28502034 tgtgatgatagaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagtag 28502115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 45398625 - 45398706
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||| |||||  |||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  45398625 tgtgatggaagaaggtggtacgctcaactttgatctcgaaaagtcaccgaagaacttgcacgttcgagttgttccaaagtag 45398706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 14323736 - 14323656
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagta 81  Q
    |||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  14323736 tgtgatgatagaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagta 14323656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 36633494 - 36633422
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 74  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||    
T  36633494 gtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcacgttcgagttgttc 36633422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 1515399 - 1515318
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||| ||||||||| |||||||    
T  1515399 tgtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcatgtttgagttgttccaaagtag 1515318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 16724757 - 16724677
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  16724757 gtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 16724677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 21097583 - 21097663
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  21097583 gtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 21097663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 122 - 209
Target Start/End: Original strand, 42885474 - 42885561
Alignment:
Q  122 tttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaacatgcacattgttggttccttcattg 209  Q
    |||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| |||||  |||| |||||||||||||||||||    
T  42885474 tttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgttaatctgcatattgttggttccttcattg 42885561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 18093123 - 18093050
Alignment:
Q  9 aagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||| ||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||| |||||||    
T  18093123 aagaaggtgttaagctcatctttgatctcgaaaagtcaccgaagaacttgcatgttcgagttgttccaaagtag 18093050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 26821504 - 26821584
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||   ||||||||||| |||||||    
T  26821504 gtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaagtcgagttgttccaaagtag 26821584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 42885275 - 42885355
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  42885275 gtgatggaagatggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttctaaagtag 42885355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 45205426 - 45205346
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||||||| |||| ||||||||| ||||||||  ||||||||||| |||||||||||||| |||||||    
T  45205426 gtgatggaagaaggtggtaagttcatctttgatctcaaaaagtcacagaagaacttgcgcgttcgagttgttccaaagtag 45205346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 122 - 209
Target Start/End: Original strand, 26827598 - 26827685
Alignment:
Q  122 tttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaacatgcacattgttggttccttcattg 209  Q
    ||||| |||||||||||  ||||||| ||||||||||||| |||||||||||||||  ||||  ||||||||||||||||||||||||    
T  26827598 tttttagttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacattaatctgcacattgttggttccttcattg 26827685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 122 - 209
Target Start/End: Original strand, 33907326 - 33907413
Alignment:
Q  122 tttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaacatgcacattgttggttccttcattg 209  Q
    ||||| |||||||||||  ||||||| ||||||||||||| ||||||||||||||| |||||  |||| |||||||||||||||||||    
T  33907326 tttttagttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgttaatctgcatattgttggttccttcattg 33907413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 19168045 - 19167971
Alignment:
Q  8 gaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||||||| ||||||||  ||||||||||||  |||||||||||| |||||||    
T  19168045 gaagaaggtggtaagctcatatttgatctcaaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 19167971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 30567273 - 30567193
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||| |||||||||||||||||||| ||||||||||||||| ||  ||||||||||||  |||||||||||| |||||||    
T  30567273 gtgattgaagaaggtggtaagctcatctttgatctcgaaaagacacagaagaacttgcaaattcgagttgttccaaagtag 30567193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 30570958 - 30570878
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||| |||||||||||||||||||| ||||||||||||||| ||  ||||||||||||  |||||||||||| |||||||    
T  30570958 gtgattgaagaaggtggtaagctcatctttgatctcgaaaagacacagaagaacttgcaaattcgagttgttccaaagtag 30570878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 33664203 - 33664123
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||| |||||  |||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  33664203 gtgatggaagaaggtggtaaactcatccttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 33664123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 214
Target Start/End: Original strand, 11706711 - 11706803
Alignment:
Q  122 tttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaacatgcacattgttggttccttcattgattca 214  Q
    ||||| ||||||| |||  ||||||| ||| ||||||||| ||||||||||||||| ||||| |||   ||||||||||||||||||| ||||    
T  11706711 tttttagttagtcgatgaaacttgcaatcttttttataaacctaactattatgtaacgttaatatgggtattgttggttccttcattggttca 11706803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 30572597 - 30572537
Alignment:
Q  149 tctcttttataaatctaactattatgtaatgttaacatgcacattgttggttccttcattg 209  Q
    ||||||||||||| | ||||||||||||| |||||  ||||||||||||||||||||||||    
T  30572597 tctcttttataaacccaactattatgtaacgttaatctgcacattgttggttccttcattg 30572537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 308
Target Start/End: Complemental strand, 25205961 - 25205874
Alignment:
Q  221 tatgttggccaaaattcggcaacaaagacgtctcagaaggtcctctgccatagccctcttgaaccactcctacggaaggaggctgtga 308  Q
    |||||||||||||||| |||||||||||||| || ||||||||||   | || |||| |||||| ||||| ||||||||||| |||||    
T  25205961 tatgttggccaaaatttggcaacaaagacgtatctgaaggtcctccatcgtatcccttttgaacaactcccacggaaggaggttgtga 25205874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 133
Target Start/End: Original strand, 16883983 - 16884033
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagt 133  Q
    |||||||||||||||||||||| |||||| ||| || ||||||||||||||    
T  16883983 cttttcattttgtctgatgtaagtattggcaaacatccctttttggttagt 16884033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 133
Target Start/End: Original strand, 17041673 - 17041723
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagt 133  Q
    |||||||||||||||||||||| |||||| ||| || ||||||||||||||    
T  17041673 cttttcattttgtctgatgtaagtattggcaaacatccctttttggttagt 17041723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 108; Significance: 3e-54; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 9226456 - 9226329
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatgg-cacttgcagtctcttttataaatctaactattatgtaatgtt 181  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  9226456 cttttcattttttctgatgtaaatattgggaaaaattcctttttggttagtctatgaacacttgcagtctcttttataaatctaactattatgtaatgtt 9226357  T
Q  182 aacatgcacattgttggttccttcattg 209  Q
    || |||||||||||||||||||||||||    
T  9226356 aatatgcacattgttggttccttcattg 9226329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 42827610 - 42827484
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||    
T  42827610 cttttcattttgtctaatgtaaatattggcaaaaatccctttttggttagtctatgacacttgcagtctcttttataaacctaactattatgtaacgtta 42827511  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||||||||||||    
T  42827510 atctgcacattgttggttccttcattg 42827484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 83 - 207
Target Start/End: Complemental strand, 33638910 - 33638786
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||| ||||||||| ||||||||||||||| ||||    
T  33638910 cttttcattttgtctgatgtaaatattggcaaaaattcctttttggttagtctatgacacttgcaatcttttttataaacctaactattatgtaacgtta 33638811  T
Q  183 acatgcacattgttggttccttcat 207  Q
    |  ||||||||||||||||||||||    
T  33638810 atctgcacattgttggttccttcat 33638786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 83 - 202
Target Start/End: Original strand, 47174503 - 47174622
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||| ||||    
T  47174503 cttttcattttgtctgatgtaaatattggcaaaaatccctttttggttagtctatgacacttgaagtctcttttataaacctaactattatgtaacgtta 47174602  T
Q  183 acatgcacattgttggttcc 202  Q
    | ||||||||||||||||||    
T  47174603 atatgcacattgttggttcc 47174622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 23766674 - 23766548
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  23766674 cttttcattttgtctgatgtaagtattggcaaaaattcctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 23766575  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  || |||||||||||||||||||||    
T  23766574 atttgtacattgttggttccttcattg 23766548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 83 - 205
Target Start/End: Original strand, 42996476 - 42996598
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||| ||||||||||||||||| |||||| ||||||| ||||||||||| |||||| ||||||||||||||| ||||||||||||||| ||||    
T  42996476 cttttcattttatctgatgtaaatattggcaaaaatcccttttttgttagtctatgacacttgtagtctcttttataaacctaactattatgtaacgtta 42996575  T
Q  183 acatgcacattgttggttccttc 205  Q
    | |||||||||||||||||||||    
T  42996576 atatgcacattgttggttccttc 42996598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 83 - 213
Target Start/End: Original strand, 9149389 - 9149520
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcag-tctcttttataaatctaactattatgtaatgtt 181  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||   | ||||||||| ||||||||||||||| |||    
T  9149389 cttttcattttgtctgatgtaaatattggcaaaaattactttttggttagtctatgacacttgcagcatttttttataaacctaactattatgtaacgtt 9149488  T
Q  182 aacatgcacattgttggttccttcattgattc 213  Q
    ||  ||||||||||||||||||||||||||||    
T  9149489 aatctgcacattgttggttccttcattgattc 9149520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 84 - 214
Target Start/End: Complemental strand, 23299957 - 23299827
Alignment:
Q  84 ttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaa 183  Q
    ||||||||||||||||| |||||||||  |||||| ||||||||||||||||||| |||||  ||||| ||||||||| ||||||||||||||| |||||    
T  23299957 ttttcattttgtctgatttaaatattgacaaaaatccctttttggttagtctatgacacttaaagtcttttttataaacctaactattatgtaacgttaa 23299858  T
Q  184 catgcacattgttggttccttcattgattca 214  Q
     ||||||||||||||||||||||||| ||||    
T  23299857 tatgcacattgttggttccttcattggttca 23299827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 83 - 213
Target Start/End: Complemental strand, 27735284 - 27735154
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||| ||||||||||||||| |||||| |||||||||||||| |||| |||||||||||| ||||||||| ||||||||||||||| ||||    
T  27735284 cttttcattttgtttgatgtaaatattggcaaaaatccctttttggttagtttatgacacttgcagtcttttttataaacctaactattatgtaacgtta 27735185  T
Q  183 acatgcacattgttggttccttcattgattc 213  Q
    |  ||||| ||||||||| ||||||||||||    
T  27735184 atctgcactttgttggttacttcattgattc 27735154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 42245091 - 42244965
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||  | ||||||||||||||||||||  |||||||||||||| ||||    
T  42245091 cttttcattttgtctgatgtaaatattggcaaaaatccctttttggttagtctattactcttgcagtctcttttataaacataactattatgtaacgtta 42244992  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  |||||||||||||||| |||||||    
T  42244991 atctgcacattgttggttcattcattg 42244965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 83 - 214
Target Start/End: Complemental strand, 6911710 - 6911579
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||| ||||||  |||||| |||||||| || |||||| ||||||||||||||| ||||||||||||||| ||||    
T  6911710 cttttcattttgtctgatgtaaatattggcaaaaatctctttttagttagtctttgacacttggagtctcttttataaacctaactattatgtaacgtta 6911611  T
Q  183 acatgcacattgttggttccttcattgattca 214  Q
    |  |||||||| ||||||||||||||| ||||    
T  6911610 atctgcacattattggttccttcattggttca 6911579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 83 - 214
Target Start/End: Complemental strand, 47573688 - 47573557
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||| ||||||  |||||| |||||||| || |||||| ||||||||||||||| ||||||||||||||| ||||    
T  47573688 cttttcattttgtctgatgtaaatattggcaaaaatctctttttagttagtctttgacacttggagtctcttttataaacctaactattatgtaacgtta 47573589  T
Q  183 acatgcacattgttggttccttcattgattca 214  Q
    |  |||||||| ||||||||||||||| ||||    
T  47573588 atctgcacattattggttccttcattggttca 47573557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 17477917 - 17478043
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||| ||||||||||||||||| |||||| || ||||||||||| ||||  ||||||| ||||||| ||||| ||||||||||||||||||||    
T  17477917 cttttcattttttctgatgtaaatattggcaaaaatcccattttggttagtttatgaaacttgcaatctctttcataaacctaactattatgtaatgtta 17478016  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||||||||||||    
T  17478017 atctgcacattgttggttccttcattg 17478043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 17575297 - 17575171
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||| ||||||||||||||||| |||||| || ||||||||||| ||||  ||||||| ||||||| ||||| ||||||||||||||||||||    
T  17575297 cttttcattttttctgatgtaaatattggcaaaaatcccattttggttagtttatgaaacttgcaatctctttcataaacctaactattatgtaatgtta 17575198  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||||||||||||    
T  17575197 atctgcacattgttggttccttcattg 17575171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 83 - 205
Target Start/End: Original strand, 19521154 - 19521276
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||| ||||||  |||||| |||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  19521154 cttttcattttgtctgatgtaaatattggcaaaaatctctttttcgttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 19521253  T
Q  183 acatgcacattgttggttccttc 205  Q
    |  ||||||||||||||||||||    
T  19521254 atctgcacattgttggttccttc 19521276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 83 - 205
Target Start/End: Complemental strand, 38434785 - 38434663
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||| ||||||||||||||||  |||||| ||||||| ||||||||||| |||||| ||||||||||||||| ||||||||||||||| ||||    
T  38434785 cttttcattttatctgatgtaaatattgacaaaaatcccttttttgttagtctatgacacttgtagtctcttttataaacctaactattatgtaacgtta 38434686  T
Q  183 acatgcacattgttggttccttc 205  Q
    |  ||||||||||||||||||||    
T  38434685 atctgcacattgttggttccttc 38434663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 47163788 - 47163660
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcactt--gcagtctcttttataaatctaactattatgtaatgt 180  Q
    ||||||||||||||||||||||||||||  |||||| | |||||||||||| |||| |||||  ||||||||||||||||| ||||||||||||||| ||    
T  47163788 cttttcattttgtctgatgtaaatattgataaaaatccatttttggttagtttatgacacttttgcagtctcttttataaacctaactattatgtaacgt 47163689  T
Q  181 taacatgcacattgttggttccttcattg 209  Q
    |||  ||||||||||||||||||||||||    
T  47163688 taatctgcacattgttggttccttcattg 47163660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 83 - 202
Target Start/End: Complemental strand, 8926126 - 8926007
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  8926126 cttttcattttgtctgatgtaagtattggcaaaaattcctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 8926027  T
Q  183 acatgcacattgttggttcc 202  Q
    |  || ||||||| ||||||    
T  8926026 atctgtacattgtcggttcc 8926007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 5962724 - 5962850
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||| ||||||| |||||||||||| ||||||  ||||||||||||||||||  ||||||| ||||||||||||| |||||||||||||||  |||    
T  5962724 cttttcatattgtctggtgtaaatattggcaaaaatatctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacatta 5962823  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||||||||||||    
T  5962824 atttgcacattgttggttccttcattg 5962850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 11499886 - 11500013
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattccttttt-ggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtt 181  Q
    ||||||||||||||||||||||||||||| |||||| | ||||| |||| |||||||  ||||||| | ||||||||||| ||||||||||||||| |||    
T  11499886 cttttcattttgtctgatgtaaatattggcaaaaatccattttttggtttgtctatgaaacttgcaatatcttttataaacctaactattatgtaacgtt 11499985  T
Q  182 aacatgcacattgttggttccttcattg 209  Q
    ||  ||||||||||||||||||||||||    
T  11499986 aatctgcacattgttggttccttcattg 11500013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 177
Target Start/End: Original strand, 3795538 - 3795632
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaa 177  Q
    ||||||||||| ||||||||||||||| | |||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  3795538 cttttcattttatctgatgtaaatattagcaaaaatccctttttggttagtctatgacacttgcagtcttttttataaatctaactattatgtaa 3795632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 4481622 - 4481496
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||  |||||| | ||||||| ||||||||| |||||| ||||||||||||||| |||||||||| |||| ||||    
T  4481622 cttttcattttgtctgatgtaaatattgacaaaaatccatttttggctagtctatgacacttgtagtctcttttataaacctaactattaggtaacgtta 4481523  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  | |||||||||| |||||||||||    
T  4481522 atctacacattgttgattccttcattg 4481496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 205
Target Start/End: Original strand, 33030824 - 33030946
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||| ||  |||||| |||||||||||||||||||  ||||||| |||||||||||||  |||||||||||||| ||||    
T  33030824 cttttcattttgtctgatgtaaatactgacaaaaatccctttttggttagtctatgaaacttgcaatctcttttataaacttaactattatgtaacgtta 33030923  T
Q  183 acatgcacattgttggttccttc 205  Q
    |  | ||||||||||||||||||    
T  33030924 atctacacattgttggttccttc 33030946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 42687580 - 42687706
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||| |||||||||||| ||||||  ||||||||||| ||||||  || |||| ||||||||||||| || |||||||||||| ||||    
T  42687580 cttttcattttgtctggtgtaaatattggcaaaaatctctttttggttattctatgaaacctgcaatctcttttataaacctgactattatgtaacgtta 42687679  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||||||||||||    
T  42687680 atctgcacattgttggttccttcattg 42687706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 17469775 - 17469886
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||| ||||||||||||| |||||| ||||||||||||||| |||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  17469775 cttttcattttgtctaatgtaaatattggcaaaaatccctttttggttagtcaatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 17469874  T
Q  183 acatgcacattg 194  Q
    |  |||||||||    
T  17469875 atctgcacattg 17469886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 17583439 - 17583328
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||| ||||||||||||| |||||| ||||||||||||||| |||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  17583439 cttttcattttgtctaatgtaaatattggcaaaaatccctttttggttagtcaatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 17583340  T
Q  183 acatgcacattg 194  Q
    |  |||||||||    
T  17583339 atctgcacattg 17583328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 9149213 - 9149294
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  9149213 tgtgattgaagaaggtggtaagctcatctttgatctcgaaaagtcatcgaagaacttgcatgttcgagttgttccaaagtag 9149294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 9226632 - 9226551
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||| |||||||    
T  9226632 tgtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcaaagaagaacttgcacgttcgagttgttccaaagtag 9226551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 23300131 - 23300050
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||| |||||||    
T  23300131 tgtgatggaagaaggtggtaagctcatctttgatctcgaaaaatcatcgaagaacttgcatgttcgagttgttcgaaagtag 23300050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 27735460 - 27735379
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||| |||||||    
T  27735460 tgtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcaccgaagaacttgcatgttcgagttgttccaaagtag 27735379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 42827786 - 42827705
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  42827786 tgtgatggaagaaggtgataagctcatctttgatctcgaaaagtcaccgaagaacttgcacgttcgagttgttccaaagtag 42827705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 47174327 - 47174408
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||| |||||||    
T  47174327 tgtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcaccgaaaaacttgcacgttcgagttgttccaaagtag 47174408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 47163962 - 47163891
Alignment:
Q  3 tgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 74  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  47163962 tgatggaagaaggtggtaagctcatctttgatctcgaaaagtcctcgaagaacttgcacgttcgagttgttc 47163891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 6911886 - 6911805
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  6911886 tgtgatgatagaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagtag 6911805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 17482364 - 17482486
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||| ||||||||||||||||| |||||| || ||||||||||| ||||  ||||||| ||||||| ||||| ||||||||    ||||||||    
T  17482364 cttttcattttttctgatgtaaatattggcaaaaatcccattttggttagtttatgaaacttgcaatctctttcataaacctaactat----taatgtta 17482459  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||||||||||||    
T  17482460 atctgcacattgttggttccttcattg 17482486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 17570850 - 17570728
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||| ||||||||||||||||| |||||| || ||||||||||| ||||  ||||||| ||||||| ||||| ||||||||    ||||||||    
T  17570850 cttttcattttttctgatgtaaatattggcaaaaatcccattttggttagtttatgaaacttgcaatctctttcataaacctaactat----taatgtta 17570755  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||||||||||||    
T  17570754 atctgcacattgttggttccttcattg 17570728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 38434957 - 38434888
Alignment:
Q  5 atggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 74  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  38434957 atggaagaaggtggtaagctcatctttgatctcgaaaagtcaccgaagaacttgcacgttcgagttgttc 38434888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 47573864 - 47573783
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  47573864 tgtgatgatagaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagtag 47573783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 14308783 - 14308863
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  14308783 gtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 14308863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 17482189 - 17482269
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||  |||||||||||| |||||||    
T  17482189 gtgatggaagaaggtgataagctcatctttgatctcgaaaagtcatagaagaacttgcaaattcgagttgttccaaagtag 17482269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 17571025 - 17570945
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||  |||||||||||| |||||||    
T  17571025 gtgatggaagaaggtgataagctcatctttgatctcgaaaagtcatagaagaacttgcaaattcgagttgttccaaagtag 17570945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 23766849 - 23766769
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  23766849 gtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 23766769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 3795362 - 3795435
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 74  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||  ||||||||||||    
T  3795362 tgtgatggaagaaggtggtaagctcatctttgatttcgaaaagtcaccgaagaacttgcattttcgagttgttc 3795435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 33639086 - 33639005
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||||||||||||| |||||||||||||||||  ||||||| || || ||||||||||||| |||||||    
T  33639086 tgtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcgccgaagaatttacatgttcgagttgttccaaagtag 33639005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 42245263 - 42245186
Alignment:
Q  5 atggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||||||||| ||| |||| ||||||||| |||||||||| |||||||||||||||| |||||||    
T  42245263 atggaagaaggtggtaagctcatctttaatctggaaaagtcaccgaagaacttccacgttcgagttgttccaaagtag 42245186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 42996309 - 42996374
Alignment:
Q  5 atggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagtt 70  Q
    ||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||    
T  42996309 atggaagaaggtggtaagctcatctttgatctcgaaaagtcactgaagaacttgcacgttcgagtt 42996374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 17477742 - 17477822
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  17477742 gtgatggaagaaggtgataagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 17477822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 17575472 - 17575392
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  17575472 gtgatggaagaaggtgataagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 17575392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 33030649 - 33030729
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  33030649 gtgatggaagaaggtggtaagttcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 33030729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 4481784 - 4481717
Alignment:
Q  15 gtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||| |||||||    
T  4481784 gtggtaagctcatctttgatctcgaaaagtcaccgaagaaattgcacgttcgagttgttccaaagtag 4481717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 8926301 - 8926221
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||  ||||||||||||  |||||||||||  |||||||    
T  8926301 gtgatggaagaaggtggtaaactcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgtttcaaagtag 8926221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 42687405 - 42687485
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||| |||||||||| |||||||  |||||| |||||  |||||||||||| |||||||    
T  42687405 gtgatggaagaaggtggtaagctcatctttgatctcggaaagtcacagaagaaattgcaaattcgagttgttccaaagtag 42687485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 19521019 - 19521077
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgca 60  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||    
T  19521019 gtgatggaagaaggtggtaagctcatctttaatctcgaaaagtcatagaagaacttgca 19521077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 83 - 144
Target Start/End: Original strand, 42917822 - 42917883
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcactt 144  Q
    ||||||||||||||||||||||||||||| |||||| | ||||||||||||||||| |||||    
T  42917822 cttttcattttgtctgatgtaaatattggcaaaaatccttttttggttagtctatgacactt 42917883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 5962550 - 5962622
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 74  Q
    |||||||||||||||||||||||||| |||||||| |||||||||| |||||| ||| |  ||||||||||||    
T  5962550 gtgatggaagaaggtggtaagctcatctttgatcttgaaaagtcatagaagaagttgtaaattcgagttgttc 5962622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 11499718 - 11499791
Alignment:
Q  9 aagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||| | ||||||||||||| ||||  ||||||||||||  |||||||||||| |||||||    
T  11499718 aagaaggtggtaagctcgtctttgatctcgaaaggtcacagaagaacttgcaaattcgagttgttccaaagtag 11499791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 143 - 209
Target Start/End: Original strand, 14308941 - 14309007
Alignment:
Q  143 ttgcagtctcttttataaatctaactattatgtaatgttaacatgcacattgttggttccttcattg 209  Q
    ||||| ||||||||||||| ||||||||||||||| |||||  || |||||||| ||||||||||||    
T  14308941 ttgcaatctcttttataaacctaactattatgtaacgttaatctgtacattgttagttccttcattg 14309007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 17469607 - 17469680
Alignment:
Q  9 aagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||||||||| ||||||||||||||  |||||| | |||  |||||| ||||| |||||||    
T  17469607 aagaaggtggtaagctcatattttatctcgaaaagtcacagaagaaatagcaaattcgagctgttccaaagtag 17469680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 17583607 - 17583534
Alignment:
Q  9 aagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||||||||| ||||||||||||||  |||||| | |||  |||||| ||||| |||||||    
T  17583607 aagaaggtggtaagctcatattttatctcgaaaagtcacagaagaaatagcaaattcgagctgttccaaagtag 17583534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 42917920 - 42917976
Alignment:
Q  153 ttttataaatctaactattatgtaatgttaacatgcacattgttggttccttcattg 209  Q
    ||||||||| || |||||||||||| ||||| ||||||||||||| |||||||||||    
T  42917920 ttttataaacctcactattatgtaacgttaatatgcacattgttgattccttcattg 42917976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 103; Significance: 3e-51; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 61320 - 61446
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  61320 cttttcattttgtctgatgtaaatattgggaaaattttctttttggttagtctatgacacttgtagtctcttttataaatctaactattatgtaatgtta 61419  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    | ||||||||||||| |||||||||||    
T  61420 atatgcacattgttgcttccttcattg 61446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 49897 - 49978
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  49897 tgtgatggaagaaggtggtaagctcatctttgatctcgaaaagtaatcgaagaacttgcacgttcgagttgttcaaaagtag 49978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 103; Significance: 3e-51; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 12714509 - 12714635
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||    
T  12714509 cttttcattttgtctgatgtaaatattggcaaaaatccctttttggttagtctatgacacttgcagtctcttttataaacctaactattatgtaacgtta 12714608  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    | |||||||||||||||||||||||||    
T  12714609 atatgcacattgttggttccttcattg 12714635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 83 - 213
Target Start/End: Original strand, 52309866 - 52309996
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||| ||||    
T  52309866 cttttcattttgtctgatgtaaatattggcaaaaatccctttttggttagtctatgacacttgcagtcttttttataaacctaactattatgtaacgtta 52309965  T
Q  183 acatgcacattgttggttccttcattgattc 213  Q
    |  ||||||||||||||||||||||||||||    
T  52309966 atctgcacattgttggttccttcattgattc 52309996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 12246059 - 12245933
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||  |||||| ||||||||||||||||||| | |||||| ||||||||||||| ||||||||||||||| ||||    
T  12246059 cttttcattttgtctgatgtaaatattgacaaaaatccctttttggttagtctatgacgcttgcattctcttttataaacctaactattatgtaacgtta 12245960  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    | |||||||||||||||||||||||||    
T  12245959 atatgcacattgttggttccttcattg 12245933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 18814251 - 18814377
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  18814251 cttttcattttgtctgatgtaagtattggcaaaaattcctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 18814350  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  || |||||||||||||||||||||    
T  18814351 atctgtacattgttggttccttcattg 18814377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 34687619 - 34687745
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  34687619 cttttcattttgtctgatgtaagtattggcaaaaattcctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 34687718  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  || |||||||||||||||||||||    
T  34687719 atctgtacattgttggttccttcattg 34687745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 83 - 213
Target Start/End: Complemental strand, 51965951 - 51965821
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||| | |||||| |||||||||||||| |||  |||||||||||| ||||||||| ||||||||||||||| ||||    
T  51965951 cttttcattttgtctgatgtaaatattagcaaaaatccctttttggttagtgtataacacttgcagtcttttttataaacctaactattatgtaacgtta 51965852  T
Q  183 acatgcacattgttggttccttcattgattc 213  Q
    |  ||||||||||||||||||||||||||||    
T  51965851 atctgcacattgttggttccttcattgattc 51965821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 13662624 - 13662498
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||| |||||| | ||||||||||||||||| |||||||||||||||||||||| || |||||||| ||| ||||    
T  13662624 cttttcattttgtctgatgtaaatattggcaaaaatccatttttggttagtctatgacacttgcagtctcttttataaacctgactattatataacgtta 13662525  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||| ||||||||    
T  13662524 atctgcacattgttggttgcttcattg 13662498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 34692147 - 34692273
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||||||||| |||||| |||||| |||||||||||||||||||  ||||||| ||||||||||||| ||||||||||| ||| ||||    
T  34692147 cttttcattttgtctgatgtaagtattggcaaaaatccctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatataacgtta 34692246  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||||||||||||    
T  34692247 atctgcacattgttggttccttcattg 34692273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 41830267 - 41830142
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| | ||    
T  41830267 cttttcattttgtctgatgtaagtattggcaaaaattcctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacg-ta 41830169  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    | ||| |||||||||||||||||||||    
T  41830168 atatgtacattgttggttccttcattg 41830142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 16031823 - 16031696
Alignment:
Q  83 cttttcattttgtctgatgtaaatattggg-aaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtt 181  Q
    ||||||||||||| | |||||||||||||| ||||||||| ||||||||| |||||| |||||||||||||||||||||| ||||||||||||||| |||    
T  16031823 cttttcattttgtataatgtaaatattgggcaaaaattccattttggttactctatgacacttgcagtctcttttataaacctaactattatgtaacgtt 16031724  T
Q  182 aacatgcacattgttggttccttcattg 209  Q
    ||  ||||||||||||||||||| ||||    
T  16031723 aatctgcacattgttggttccttaattg 16031696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 83 - 214
Target Start/End: Complemental strand, 43254903 - 43254772
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||| ||||||  |||||| |||||||| || |||||| ||||||||||||||| ||||||||||||||| ||||    
T  43254903 cttttcattttgtctgatgtaaatattggcaaaaatctctttttagttagtctttgacacttggagtctcttttataaacctaactattatgtaacgtta 43254804  T
Q  183 acatgcacattgttggttccttcattgattca 214  Q
    |  |||||||| ||||||||||||||| ||||    
T  43254803 atctgcacattattggttccttcattggttca 43254772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 83 - 214
Target Start/End: Complemental strand, 50395317 - 50395186
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||| ||||||  |||||| |||||||| || |||||| ||||||||||||||| ||||||||||||||| ||||    
T  50395317 cttttcattttgtctgatgtaaatattggcaaaaatctctttttagttagtctttgacacttggagtctcttttataaacctaactattatgtaacgtta 50395218  T
Q  183 acatgcacattgttggttccttcattgattca 214  Q
    |  |||||||| ||||||||||||||| ||||    
T  50395217 atctgcacattattggttccttcattggttca 50395186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 31619721 - 31619847
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||| ||||||| |||||  ||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||| ||||    
T  31619721 cttttcattttgtccgatgtaagtattgacaaaaattcctttttggttagtctatgaaacttgcaatctcttttataaatctaactattatgtaacgtta 31619820  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  || |||||||||||| ||||||||    
T  31619821 atctgtacattgttggtttcttcattg 31619847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 36681276 - 36681401
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||| ||||||||||||  |||| | | ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||    
T  36681276 cttttcattttgtctaatgtaaatattgacaaaa-tccatttttggttagtctatgacacttgcagtctcttttataaacctaactattatgtaacgtta 36681374  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||||||||||||    
T  36681375 atctgcacattgttggttccttcattg 36681401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 41963148 - 41963022
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  41963148 cttttcattttgtctgatgtaagtattggcaaaaattcctttttggttagtgtatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 41963049  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  |  |||||||||||||||||||||    
T  41963048 atctatacattgttggttccttcattg 41963022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 83 - 213
Target Start/End: Original strand, 47135432 - 47135562
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||| ||||||    ||| |||||||||||| |||||||||||| ||||||||| ||||||||||||||| ||||    
T  47135432 cttttcattttgtctgatgtaaatattggcaaaaatcatgtttaggttagtctatgacacttgcagtcttttttataaacctaactattatgtaacgtta 47135531  T
Q  183 acatgcacattgttggttccttcattgattc 213  Q
    |  | ||||||||||||||||||||||||||    
T  47135532 atctacacattgttggttccttcattgattc 47135562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 48340361 - 48340487
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||  ||||||  |||||||||||||||||| |||||||||||||||||||||| |||| |||||||||| |||     
T  48340361 cttttcattttgtctgatgtaaatattgacaaaaataactttttggttagtctatgacacttgcagtctcttttataaacctaaatattatgtaacgttg 48340460  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  |||||||| |||||||||||||||    
T  48340461 atctgcacattattggttccttcattg 48340487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 84 - 209
Target Start/End: Complemental strand, 52521785 - 52521660
Alignment:
Q  84 ttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaa 183  Q
    ||||||||||||||||||||| |||||| |||||| | |||||||||||| ||||  ||||||| ||||||||||||| ||||||||||||||| |||||    
T  52521785 ttttcattttgtctgatgtaagtattggcaaaaatccatttttggttagtttatgaaacttgcactctcttttataaacctaactattatgtaacgttaa 52521686  T
Q  184 catgcacattgttggttccttcattg 209  Q
      ||||||||||||||||||||||||    
T  52521685 tttgcacattgttggttccttcattg 52521660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 86 - 209
Target Start/End: Complemental strand, 28565934 - 28565808
Alignment:
Q  86 ttcattttgtctgatgtaaatattgggaaaaa---ttcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||||||||||||| |||||   |  |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||  |||    
T  28565934 ttcattttgtctgatgtaaatattggaaaaaaaaatctctttttggttagtctatgacacttgcagtctcttttataaacctaactattatgtaacatta 28565835  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||||||||||||    
T  28565834 atctgcacattgttggttccttcattg 28565808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 83 - 214
Target Start/End: Original strand, 18111618 - 18111749
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||| ||||||  |||||| |||||||| || |||||| ||||||||||||||| |||||||||| |||| ||||    
T  18111618 cttttcattttgtctgatgtaaatattggcaaaaatctctttttagttagtctttgacacttggagtctcttttataaacctaactattacgtaacgtta 18111717  T
Q  183 acatgcacattgttggttccttcattgattca 214  Q
    |  |||||||| ||||||||||||||| ||||    
T  18111718 atctgcacattattggttccttcattggttca 18111749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 17671488 - 17671614
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||| ||||||||||||| |||||| | ||||||||||||||||| |||||| ||| ||||||||| |  |||||||||||||| ||||    
T  17671488 cttttcattttgtctaatgtaaatattggcaaaaatccatttttggttagtctatgacacttgtagtatcttttatagacataactattatgtaacgtta 17671587  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||||||||||||    
T  17671588 atctgcacattgttggttccttcattg 17671614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 45004765 - 45004890
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||| ||||||||||||  |||| | | |||||| |||||||||| |||||||||||||||||||||| ||||||||||||||| ||||    
T  45004765 cttttcattttgtctaatgtaaatattgacaaaa-tccatttttgattagtctatgacacttgcagtctcttttataaacctaactattatgtaacgtta 45004863  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||||||||||||    
T  45004864 atctgcacattgttggttccttcattg 45004890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 12246235 - 12246154
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12246235 tgtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcaccgaagaacttgcacgttcgagttgttcaaaagtag 12246154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 102 - 204
Target Start/End: Original strand, 15317298 - 15317400
Alignment:
Q  102 taaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaacatgcacattgttggttc 201  Q
    |||||||||| |||||| ||||||||||||||| ||| |||||||||||||||||||||| | ||||||||||||| ||||| |||||||||||||||||    
T  15317298 taaatattggcaaaaatacctttttggttagtcaatgacacttgcagtctcttttataaacccaactattatgtaacgttaatatgcacattgttggttc 15317397  T
Q  202 ctt 204  Q
    |||    
T  15317398 ctt 15317400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 177
Target Start/End: Complemental strand, 29840905 - 29840811
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaa 177  Q
    ||||||||||| ||||||||||||||| | |||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  29840905 cttttcattttatctgatgtaaatattagcaaaaatccctttttggttagtctatgacacttgcagtcttttttataaatctaactattatgtaa 29840811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 16031999 - 16031918
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  16031999 tgtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcaccgaagaacttgcacgttcgagttgttccaaagtag 16031918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 83 - 214
Target Start/End: Original strand, 24294561 - 24294692
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||| ||||||||||||| |||| |  |||||| |||||||| || |||||| ||||||||||||||| ||||||| ||||||| ||||    
T  24294561 cttttcattttgtctaatgtaaatattggcaaaactctctttttagttagtctttgacacttggagtctcttttataaacctaactagtatgtaacgtta 24294660  T
Q  183 acatgcacattgttggttccttcattgattca 214  Q
    |  ||||||||||||||| |||||||| ||||    
T  24294661 atctgcacattgttggtttcttcattggttca 24294692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 83 - 214
Target Start/End: Complemental strand, 39760368 - 39760237
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||| ||||||||||||| |||| |  |||||| |||||||| || |||||| ||||||||||||||| ||||||| ||||||| ||||    
T  39760368 cttttcattttgtctaatgtaaatattggcaaaagtctctttttagttagtctttgacacttggagtctcttttataaacctaactagtatgtaacgtta 39760269  T
Q  183 acatgcacattgttggttccttcattgattca 214  Q
    |  ||||||||||||||| |||||||| ||||    
T  39760268 atctgcacattgttggtttcttcattggttca 39760237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 83 - 193
Target Start/End: Original strand, 10763414 - 10763524
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||| |||||||||| |||| | |||||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||| ||||    
T  10763414 cttttcattttatctgatgtaagtattagcaaaaatccctttttggttagtctatgacacttgcagtcttttttataaacctaactattatgtaacgtta 10763513  T
Q  183 acatgcacatt 193  Q
    |  ||||||||    
T  10763514 atctgcacatt 10763524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 83 - 213
Target Start/End: Original strand, 50561074 - 50561202
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||| |||||||||| | ||||||||| |||| |||||||| | ||||    
T  50561074 cttttcattttgtctgatgtaaataatggcaaaaatccctttttggttagtctatgacacttgcagtattttttataaacctaa-tattatgt-acgtta 50561171  T
Q  183 acatgcacattgttggttccttcattgattc 213  Q
    |  |||| |||||||||||||||||| ||||    
T  50561172 atctgcatattgttggttccttcatttattc 50561202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 17671162 - 17671243
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  17671162 tgtgatggaagaaggtggtaagctcacattttatctcgaaaagtcaccgaagaacttgcacgttcgagttgttccaaagtag 17671243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 83 - 183
Target Start/End: Original strand, 44406407 - 44406507
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||| ||||||||||||| |||||| ||||||||||||||| |||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  44406407 cttttcattttgtctaatgtaaatattggcaaaaatccctttttggttagtcaatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 44406506  T
Q  183 a 183  Q
    |    
T  44406507 a 44406507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 52309690 - 52309769
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagt 80  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||| |||||    
T  52309690 tgtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcaccgaagaacttgcatgttcgagttgttccaaagt 52309769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 10763238 - 10763319
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||| ||||||||||||| |||||||    
T  10763238 tgtgatggaagaaggtggtaagctcatctttgatttcgaaaagtcaccgaagaacttgcatgttcgagttgttccaaagtag 10763319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 15315106 - 15315179
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 74  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  15315106 tgtgatggaagaaggtggaaagctcatctttgatctcgaaaagtcatcgaagaatttgcacgttcgagttgttc 15315179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 18111442 - 18111523
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  18111442 tgtgatgatagaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagtag 18111523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 36681100 - 36681181
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||| |||||||| |||||||    
T  36681100 tgtgatggaagaaggtggtaagttcatctttgatctcgaaaagtcaccgaagaacttgcacgttcaagttgttccaaagtag 36681181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 43255079 - 43254998
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  43255079 tgtgatgatagaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagtag 43254998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 50395493 - 50395412
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  50395493 tgtgatgatagaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagtag 50395412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 24294394 - 24294466
Alignment:
Q  10 agaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  24294394 agaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagtag 24294466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 31619546 - 31619626
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||||||||| |||||||    
T  31619546 gtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaagttcgagttgttccaaagtag 31619626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 38845451 - 38845351
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||| | |||||||||||| |||||| |||||||||||||||||||   |||||| ||||||||||||| ||||||||||||||| ||||    
T  38845451 cttttcattttgtcaggtgtaaatattggcaaaaatccctttttggttagtctatgaagcttgcaatctcttttataaacctaactattatgtaacgtta 38845352  T
Q  183 a 183  Q
    |    
T  38845351 a 38845351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 12714333 - 12714406
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 74  Q
    ||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||| |||||    
T  12714333 tgtgatggaagaaggtggtaagctcatctttgatctcgaaaatttatcgaagaacttgcacgttcgagctgttc 12714406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 13662800 - 13662727
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 74  Q
    ||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||| |||||    
T  13662800 tgtgatggaagaaggtggtaaactcatctttgatctcgaaaagttatcgaagaacttgcacgttcgagctgttc 13662727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 28566113 - 28566040
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 74  Q
    ||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||| |||||    
T  28566113 tgtgatggaagaaggtggtaagctcatctttgatctcgaaaagttattgaagaacttgcacgttcgagctgttc 28566040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 29841081 - 29841000
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||||||||||||| |||||| ||||||| ||| ||||||||||||| ||||||||||||| |||||||    
T  29841081 tgtgatggaagaaggtggtaagctcatctttgatttcgaaaaatcaccgaagaacttgcatgttcgagttgttccaaagtag 29841000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 84 - 193
Target Start/End: Original strand, 42682419 - 42682527
Alignment:
Q  84 ttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaa 183  Q
    |||| ||||| ||||||||||||||| | |||| | ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||| |||||    
T  42682419 tttttattttatctgatgtaaatattagcaaaa-tccctttttggttagtctatgacacttgcagtcttttttataaacctaactattatgtaacgttaa 42682517  T
Q  184 catgcacatt 193  Q
      ||||||||    
T  42682518 tctgcacatt 42682527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 45004589 - 45004670
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||| |||| |||||||||||||||||| | |||||||||||||||| |||||||| |||||||    
T  45004589 tgtgatggaagaaggtggtaagttcatctttgatctcgaaaagtcaccaaagaacttgcacgttcaagttgttccaaagtag 45004670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 18814076 - 18814156
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  18814076 gtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 18814156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 121 - 205
Target Start/End: Original strand, 28631382 - 28631466
Alignment:
Q  121 ctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaacatgcacattgttggttccttc 205  Q
    |||||| ||||||||||| |||||| ||||||||||||||| ||||||||||||||| |||||  ||||||||||||||||||||    
T  28631382 cttttttgttagtctatgacacttgtagtctcttttataaacctaactattatgtaacgttaatctgcacattgttggttccttc 28631466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 34687444 - 34687524
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  34687444 gtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 34687524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 34691972 - 34692052
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  34691972 gtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 34692052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 41830442 - 41830362
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  41830442 gtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 41830362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 48340186 - 48340266
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||||||| |||| ||||||||| ||||||||| |||||||||||||||||||||||||  |||||||    
T  48340186 gtgatggaagaaggtggtaagttcatctttgatctcaaaaagtcatagaagaacttgcacgttcgagttgtttcaaagtag 48340266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 50560898 - 50560979
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||| |||||| ||||| |||||||||||||| ||| ||||||||||||| || |||||||||| |||||||    
T  50560898 tgtgatggaagaagatggtaaactcatctttgatctcgaaaattcagcgaagaacttgcatgtccgagttgttctaaagtag 50560979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 51966126 - 51966046
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||| |||||||||||||||| |||||||||||||||||| ||||||| ||||| ||||||||| ||| |||||||    
T  51966126 tgtgatggaa-aaggtggtaagctcatctttgatctcgaaaagtcaccgaagaaattgcatgttcgagtttttccaaagtag 51966046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 38845617 - 38845537
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||| | ||||||||||||||||  ||||||||||||  |||||||| ||| |||||||    
T  38845617 gtgatggaagaaggtggtaagctcatctctgatctcgaaaagtcacagaagaacttgcaaattcgagttattccaaagtag 38845537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 44406232 - 44406312
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||  ||| ||||||||  |||||||||||| |||||||    
T  44406232 gtgatggaagaacgtggtaaactcatatttgatctcgaaaagtcacagaataacttgcaaattcgagttgttccaaagtag 44406312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 52521961 - 52521881
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||| || ||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  52521961 gtgatggaagaaggtggcaaactcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 52521881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 41963323 - 41963243
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||| | ||||||||| ||||||||||||||||||  ||||||||||||  ||||| |||||| |||||||    
T  41963323 gtgatggaagaaggagttaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgatttgttccaaagtag 41963243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 42682246 - 42682323
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||||    ||| | ||||||||| ||||||||||||| ||||||||||||| |||||||    
T  42682246 tgtgatggaagaaggtggtaagctcat----gattttgaaaagtcaccgaagaacttgcatgttcgagttgttccaaagtag 42682323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 308
Target Start/End: Complemental strand, 26941415 - 26941330
Alignment:
Q  223 tgttggccaaaattcggcaacaaagacgtctcagaaggtcctctgccatagccctcttgaaccactcctacggaaggaggctgtga 308  Q
    |||| ||||||| |||||||||||||||| || ||||||||||  || || ||||| ||||| | ||| |||||||||||||||||    
T  26941415 tgtttgccaaaactcggcaacaaagacgtgtccgaaggtcctccaccgtatccctcctgaacaaatcccacggaaggaggctgtga 26941330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 2e-49; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 35436862 - 35436988
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  35436862 cttttcattttgcctgatgtaaatattgggaaaaattcctttttggttagtctatgacacttgcagtctcttttataaatct-actattatgtaatgtta 35436960  T
Q  183 acatgcaca-ttgttggttccttcattg 209  Q
    | ||||||| ||||||||||||||||||    
T  35436961 atatgcacatttgttggttccttcattg 35436988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 8242723 - 8242849
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||  |||||| ||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||| ||||    
T  8242723 cttttcattttgtctgatgtaaatattgacaaaaatccctttttggttagtctatgacacttacagtctcttttataaacctaactattatgtaacgtta 8242822  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    | |||||||||||||||||||||||||    
T  8242823 atatgcacattgttggttccttcattg 8242849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 82 - 209
Target Start/End: Complemental strand, 54793197 - 54793070
Alignment:
Q  82 gcttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtt 181  Q
    |||||||||||||||||||||||||||||| ||||||  |||||||||||||||||| ||||||||||||||||||||||  |||||||||||||| |||    
T  54793197 gcttttcattttgtctgatgtaaatattggcaaaaatctctttttggttagtctatgacacttgcagtctcttttataaacttaactattatgtaacgtt 54793098  T
Q  182 aacatgcacattgttggttccttcattg 209  Q
    ||  ||||||||||||||||||||||||    
T  54793097 aatctgcacattgttggttccttcattg 54793070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 23193491 - 23193617
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||| ||||    
T  23193491 cttttcattttgtctgatgtaaatattggcaaaaatccctttttggttagtctatgacacttgaagtctcttttataaacctaactattatgtaacgtta 23193590  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  |||||||||||||||| |||||||    
T  23193591 atctgcacattgttggttctttcattg 23193617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 52463163 - 52463037
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||    
T  52463163 cttttcattttgtctgatgcaaatattggcaaaaatccctttttggttagtctatgacacttgcagtctcttttataaacctaactattatgtaacgtta 52463064  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||| ||||||||    
T  52463063 atctgcacattgttggtttcttcattg 52463037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 83 - 213
Target Start/End: Complemental strand, 55295010 - 55294880
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||| | ||||||||| ||||||||||||||| ||||    
T  55295010 cttttcattttgtctgatgtaaatattggcaaaaatccctttttggttagtctatgacacttgcagttttttttataaacctaactattatgtaacgtta 55294911  T
Q  183 acatgcacattgttggttccttcattgattc 213  Q
    |  ||||||||||||||| ||||||||||||    
T  55294910 atctgcacattgttggttacttcattgattc 55294880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 21699804 - 21699678
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||| |||||||||||| |||||| |||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  21699804 cttttcattttgtctggtgtaaatattggcaaaaatccctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 21699705  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||||||||||||    
T  21699704 atctgcacattgttggttccttcattg 21699678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 83 - 213
Target Start/End: Complemental strand, 40827266 - 40827136
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||| |||||| | ||||||||||||||||  |||||||||||| ||||||||| ||||||||||||||| ||||    
T  40827266 cttttcattttgtctgatgtaaatattggcaaaaatccttttttggttagtctatcacacttgcagtcttttttataaacctaactattatgtaacgtta 40827167  T
Q  183 acatgcacattgttggttccttcattgattc 213  Q
    |  |||||||||||||||||||| |||||||    
T  40827166 atctgcacattgttggttccttcgttgattc 40827136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 84 - 209
Target Start/End: Original strand, 32755540 - 32755665
Alignment:
Q  84 ttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaa 183  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||  ||||||| ||||||||||||| ||||||| ||||||| |||||    
T  32755540 ttttcattttgtctgatgtaaatattggcaaaaatccctttttggttagtctatgaaacttgcaatctcttttataaacctaactactatgtaacgttaa 32755639  T
Q  184 catgcacattgttggttccttcattg 209  Q
      ||||||||||||||||||||||||    
T  32755640 tttgcacattgttggttccttcattg 32755665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 36165242 - 36165115
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaa-ttcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtt 181  Q
    |||||||||||||||||| |||||||||||||||| ||| |||||| |||||||||| || ||||||||||||||||||||||||||||||| |||||||    
T  36165242 cttttcattttgtctgatataaatattgggaaaaaattcttttttgattagtctatgacagttgcagtctcttttataaatctaactattatataatgtt 36165143  T
Q  182 aacatgcacattgttggttccttcattg 209  Q
    || ||||||||||| | |||||||||||    
T  36165142 aatatgcacattgtagattccttcattg 36165115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 16495913 - 16496039
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||| |||||| | ||||||||||||||||| |||||||||||||||||||||| || |||||||| ||| ||||    
T  16495913 cttttcattttgtctgatgtaaatattggcaaaaatccatttttggttagtctatgacacttgcagtctcttttataaacctgactattatataacgtta 16496012  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||| ||||||||    
T  16496013 atctgcacattgttggttgcttcattg 16496039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 35088069 - 35087943
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||||||||| |||||| |||||||| |||||||||||||||||  ||||||| ||||||||||||| ||||| ||||||||| ||||    
T  35088069 cttttcattttgtctgatgtaagtattggcaaaaattcatttttggttagtctatgaaacttgcaatctcttttataaacctaacaattatgtaacgtta 35087970  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||||||||||||    
T  35087969 atctgcacattgttggttccttcattg 35087943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 48976707 - 48976833
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||| |||||||||||| ||||||  ||||||||||||||||||  ||||||| |||||| |||||| ||||||||||||||| ||||    
T  48976707 cttttcattttgtctggtgtaaatattggcaaaaatctctttttggttagtctatgaaacttgcaatctcttatataaacctaactattatgtaacgtta 48976806  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    | |||||||||||||||||||||||||    
T  48976807 atatgcacattgttggttccttcattg 48976833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 83 - 214
Target Start/End: Complemental strand, 39796704 - 39796573
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||  ||||||  |||||| |||||||| || |||||| ||||||||||||||| ||||||||||||||| ||||    
T  39796704 cttttcattttgtctgatgtaaatattgacaaaaatctctttttagttagtctttgacacttggagtctcttttataaacctaactattatgtaacgtta 39796605  T
Q  183 acatgcacattgttggttccttcattgattca 214  Q
    |  |||||||||||||||||||||||| ||||    
T  39796604 atctgcacattgttggttccttcattggttca 39796573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 50741376 - 50741502
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||| ||||||||||||||||| |||||| || ||||||||||| ||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  50741376 cttttcattttttctgatgtaaatattggcaaaaatcccattttggttagtttatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 50741475  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||||||||||||    
T  50741476 atttgcacattgttggttccttcattg 50741502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 50771478 - 50771352
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||| ||||||||||||||||| |||||| || ||||||||||| ||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  50771478 cttttcattttttctgatgtaaatattggcaaaaatcccattttggttagtttatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 50771379  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||||||||||||    
T  50771378 atttgcacattgttggttccttcattg 50771352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 54512801 - 54512927
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||| ||||||  ||||||||||| ||||||  ||| ||||||||||||||||||||||||||||||||| ||||    
T  54512801 cttttcattttgtctgatgtaaatattggcaaaaatctctttttggttaatctatgaaactcgcagtctcttttataaatctaactattatgtaacgtta 54512900  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  |||| | |||||||||||||||||    
T  54512901 atctgcataatgttggttccttcattg 54512927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 83 - 214
Target Start/End: Complemental strand, 5252605 - 5252474
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||  |||| |  |||||| |||||||| || |||||| ||||||||||||||| ||||||||||||||| ||||    
T  5252605 cttttcattttgtctgatgtaaatattgacaaaattctctttttagttagtctttgacacttggagtctcttttataaacctaactattatgtaacgtta 5252506  T
Q  183 acatgcacattgttggttccttcattgattca 214  Q
    |  |||||||||||||||||||||||| ||||    
T  5252505 atctgcacattgttggttccttcattggttca 5252474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 83 - 214
Target Start/End: Complemental strand, 6104357 - 6104227
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||  ||||||| ||||||| ||||| ||||||||||||||| ||||    
T  6104357 cttttcattttgtctgatgtaagtattggcaaaaattcctttttggttagtctatgaaacttgcaatctctttgataaacctaactattatgtaacgtta 6104258  T
Q  183 acatgcacattgttggttccttcattgattca 214  Q
    |  || ||| ||||||||||||||||| ||||    
T  6104257 atctgtaca-tgttggttccttcattggttca 6104227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 83 - 213
Target Start/End: Complemental strand, 11598195 - 11598064
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaa-tctaactattatgtaatgtt 181  Q
    ||||||||||||||||||||||| ||||| |||||  | ||||| |||||| |||| |||||||||||| ||||||||| | |||||||||||||| |||    
T  11598195 cttttcattttgtctgatgtaaacattggcaaaaaaccattttttgttagtttatgacacttgcagtcttttttataaactttaactattatgtaacgtt 11598096  T
Q  182 aacatgcacattgttggttccttcattgattc 213  Q
    ||  ||||||||||||||||||||||||||||    
T  11598095 aatctgcacattgttggttccttcattgattc 11598064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 32755334 - 32755413
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  32755334 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcaccgaagaacttgcacgttcgagttgttccaaagta 32755413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 52853673 - 52853549
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||||||||||||||||  ||||| |||||||||||||||||||  ||||||||  | ||||||||| | ||||||||||||| ||||    
T  52853673 cttttcattttgtctgatgtaaatattggcgaaaatccctttttggttagtctatgaaacttgcag--ttttttataaacccaactattatgtaacgtta 52853576  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||||||||||||    
T  52853575 atctgcacattgttggttccttcattg 52853549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 31369248 - 31369122
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||||||||| |||||  ||||||||| |||| |||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  31369248 cttttcattttgtctgatgtaagtattgacaaaaattcccttttagttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 31369149  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  || ||||||||||||| |||||||    
T  31369148 atctgtacattgttggttcattcattg 31369122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 213
Target Start/End: Complemental strand, 48521253 - 48521123
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||| |||| |   |||||||||||| |||| |||||||||||| ||||| ||| ||||||||||||||| ||||    
T  48521253 cttttcattttgtctgatgtaaatattggcaaaattctttttttggttagtatatgacacttgcagtcttttttagaaacctaactattatgtaacgtta 48521154  T
Q  183 acatgcacattgttggttccttcattgattc 213  Q
    |  |||| ||||||||||| |||||||||||    
T  48521153 atctgcatattgttggttcattcattgattc 48521123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 36165418 - 36165337
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  36165418 tgtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcatcgaagaacttgcacattcgagttgttccaaagtag 36165337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 83 - 193
Target Start/End: Original strand, 22477731 - 22477841
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||| ||||||||||||||| | |||||| ||||||||||| ||||||| |||||||||||| ||||||||| ||||||||||||||| ||||    
T  22477731 cttttcattttatctgatgtaaatattagcaaaaatccctttttggttggtctatgacacttgcagtcttttttataaacctaactattatgtaacgtta 22477830  T
Q  183 acatgcacatt 193  Q
    |  ||||||||    
T  22477831 atctgcacatt 22477841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 49113089 - 49113215
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||| ||||| |||||  |||||| |||||||| ||||||||||  ||||||  |||||| |||||| ||||||||||||||| ||||    
T  49113089 cttttcattttgtctggtgtaattattgacaaaaatccctttttgtttagtctatgaaacttgcgatctcttatataaacctaactattatgtaacgtta 49113188  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||||||||||||    
T  49113189 atctgcacattgttggttccttcattg 49113215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 48521429 - 48521348
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||| |||||||    
T  48521429 tgtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcaccgaagaacttgcatgttcgagttgttccaaagtag 48521348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 2845264 - 2845184
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagta 81  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||| ||||||||||||||||||    
T  2845264 tgtgatggaagaaggtggtaagctcatctttgatctcaaaaagtcaccgaagaacttgcacgatcgagttgttcaaaagta 2845184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 54512628 - 54512699
Alignment:
Q  3 tgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 74  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  54512628 tgatggaagaaggtggtaagctcatctttgatctcgaaaagtcatagaagaacttgcacgttcgagttgttc 54512699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 193
Target Start/End: Complemental strand, 11951206 - 11951096
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||| || ||||||||| || | |||||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||| ||||    
T  11951206 cttttcattttatccgatgtaaatgttagcaaaaatccctttttggttagtctatgacacttgcagtcttttttataaacctaactattatgtaacgtta 11951107  T
Q  183 acatgcacatt 193  Q
    |  ||||||||    
T  11951106 atctgcacatt 11951096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 23193312 - 23193390
Alignment:
Q  4 gatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||| |||||||    
T  23193312 gatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcacgttcgagttgttccaaagtag 23193390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 5252781 - 5252700
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  5252781 tgtgatgatagaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagtag 5252700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 11598367 - 11598290
Alignment:
Q  5 atggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||| |||||||||||||||||||||    
T  11598367 atggaagaaggtggtaagctcatctttgatctcgaaaagtcaccgaagtacttgcatgttcgagttgttcaaaagtag 11598290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 39796880 - 39796799
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  39796880 tgtgatgatagaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagtag 39796799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 40827442 - 40827361
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||| |||||||    
T  40827442 tgtgatggaagaatgtggtaagctcatctttgatctcgaaaagtcaccgaagaacttgcatgttcgagttgttccaaagtag 40827361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 54793372 - 54793299
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 74  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||    
T  54793372 tgtgatggaagaaggtggtaagctcatctttgatctcgaaaagttatcgaagaacttgcacgttcgagctgttc 54793299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 8242551 - 8242626
Alignment:
Q  5 atggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagt 80  Q
    |||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  8242551 atggaagagggtggtaagctcatctttgatctcgaaaagtcaccgaagaacttgcacgttcgagttgttccaaagt 8242626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 55295183 - 55295105
Alignment:
Q  4 gatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||||||| || |||||||||||||||||| ||||||||||||| ||||||||||||| |||||||    
T  55295183 gatggaagaaggtggtaagcttatctttgatctcgaaaagtcaccgaagaacttgcatgttcgagttgttccaaagtag 55295105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 16495737 - 16495810
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 74  Q
    ||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||| |||||    
T  16495737 tgtgatggaagaaggtggtaaactcatctttgatctcgaaaagttatcgaagaacttgcacgttcgagctgttc 16495810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 6104532 - 6104452
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  6104532 gtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 6104452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 31369423 - 31369343
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  31369423 gtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 31369343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 35088244 - 35088164
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  35088244 gtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 35088164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 48976532 - 48976612
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||  |||||||||||| |||||||    
T  48976532 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcacagaagaagttgcaaattcgagttgttccaaagtag 48976612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 22477555 - 22477636
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||| |||| | |||||| ||||||||||| ||||||||||||| ||||||||||||| |||||||    
T  22477555 tgtgatggaagaaggtggtatgctcctctttgatttcgaaaagtcaccgaagaacttgcatgttcgagttgttccaaagtag 22477636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 49112923 - 49113003
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||| || |||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  49112923 gtgatggaagaaggtggtaagctcatcttggatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 49113003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 50741201 - 50741281
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||| |||||||||||||| |||  ||||||||||||  |||||||||||| |||||||    
T  50741201 gtgatggaagaaggtggtaagctcatctttgatctcgaaaattcacagaagaacttgcaaattcgagttgttccaaagtag 50741281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 50771653 - 50771573
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||| |||||||||||||| |||  ||||||||||||  |||||||||||| |||||||    
T  50771653 gtgatggaagaaggtggtaagctcatctttgatctcgaaaaatcacagaagaacttgcaaattcgagttgttccaaagtag 50771573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 52840939 - 52840859
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  52840939 gtgatggaagaaggtggtaatctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 52840859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 86 - 177
Target Start/End: Original strand, 11383144 - 11383235
Alignment:
Q  86 ttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaa 177  Q
    |||||||||||| ||||||||||||| ||||||  |||||||||||||||||| ||||  ||| |||||||||||| |||| ||||||||||    
T  11383144 ttcattttgtcttatgtaaatattggtaaaaatcactttttggttagtctatgacactgacagactcttttataaacctaattattatgtaa 11383235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 122 - 209
Target Start/End: Original strand, 16341717 - 16341804
Alignment:
Q  122 tttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaacatgcacattgttggttccttcattg 209  Q
    ||||| |||||||||||  ||||||| ||||||||||||| ||||||||||| ||| |||||  ||||||||||||||||||||||||    
T  16341717 tttttagttagtctatgaaacttgcaatctcttttataaacctaactattatataacgttaatctgcacattgttggttccttcattg 16341804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 19893778 - 19893699
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagt 80  Q
    ||||||||||||||||||||||||||| || |||||||||||||||  ||||||||| || ||||||||||||| |||||    
T  19893778 tgtgatggaagaaggtggtaagctcatcttggatctcgaaaagtcacagaagaactttcatgttcgagttgttccaaagt 19893699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 52463339 - 52463258
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||| |||||||||||||||||||||  ||||||||||||||||   || ||||||||||||||||||||||| |||||||    
T  52463339 tgtgaaggaagaaggtggtaagctcattattgatctcgaaaagtcgctgatgaacttgcacgttcgagttgttccaaagtag 52463258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 52853848 - 52853768
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||| |||||||| ||||||||   ||||||||||||  |||||||||||| |||||||    
T  52853848 gtgatggaagaaggtggtaagctcatctttgatcttgaaaagtcgcagaagaacttgcaaattcgagttgttccaaagtag 52853768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 11951382 - 11951303
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagt 80  Q
    ||||||| |||||| |||||||||||| |||||| ||||||| ||| ||||||||||||| ||||||||||||| |||||    
T  11951382 tgtgatgaaagaagttggtaagctcatctttgatttcgaaaaatcaccgaagaacttgcatgttcgagttgttccaaagt 11951303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 51248384 - 51248461
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataa 160  Q
    ||||||||||||| || |||||||||||| |||||| |||||||||||||||||||  |||| || ||||||||||||    
T  51248384 cttttcattttgtgtggtgtaaatattggcaaaaatccctttttggttagtctatgaaactttcaatctcttttataa 51248461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 11326050 - 11325970
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||| |||||| || ||||||||||||||||||  ||||||||||||  |||||||||||  |||||||    
T  11326050 gtgatggaagaaggtgataagcttatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgtttgaaagtag 11325970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 51248209 - 51248289
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||| |||||||| |||| ||||||||| ||||||||  ||||||||| ||| |||||||||||| |||||||    
T  51248209 gtgatggaagaatgtggtaagttcatctttgatctcaaaaagtcacagaagaactttcacattcgagttgttccaaagtag 51248289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 21699977 - 21699899
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||  ||||||| ||||||||||||||||||  ||| ||||||||  |||||||||||| |||||||    
T  21699977 gtgatggaagaaggtgg--agctcatctttgatctcgaaaagtcacagaaaaacttgcaaattcgagttgttccaaagtag 21699899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 308
Target Start/End: Original strand, 1202167 - 1202254
Alignment:
Q  221 tatgttggccaaaattcggcaacaaagacgtctcagaaggtcctctgccatagccctcttgaaccactcctacggaaggaggctgtga 308  Q
    |||||||||||||| |||||||||||||||| |  ||||||||||   | || ||||| ||||| ||||| ||||||||||| |||||    
T  1202167 tatgttggccaaaactcggcaacaaagacgtgttcgaaggtcctccatcgtatccctcctgaacaactcccacggaaggaggttgtga 1202254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 123
Target Start/End: Complemental strand, 52840764 - 52840724
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctt 123  Q
    ||||||||||||||||||||||||||||| |||||| ||||    
T  52840764 cttttcattttgtctgatgtaaatattggcaaaaatccctt 52840724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 82
Target Start/End: Original strand, 11383004 - 11383047
Alignment:
Q  39 aaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||| ||| ||||||||||||||||||||||||||| |||||||    
T  11383004 aaaaatcaccgaagaacttgcacgttcgagttgttccaaagtag 11383047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 99; Significance: 8e-49; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 83 - 205
Target Start/End: Original strand, 4425515 - 4425637
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||    
T  4425515 ctttttattttgtctgatgtaaatattgggaaaaatccctttttggttagtctatgacacttacagtctcttttataaacctaactattatgtaatgtta 4425614  T
Q  183 acatgcacattgttggttccttc 205  Q
    | |||||||||||||||||||||    
T  4425615 atatgcacattgttggttccttc 4425637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 1073502 - 1073376
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  1073502 cttttcattttgtctgatgtaagtattggcaaaaattcctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 1073403  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||||||||||||    
T  1073402 atctgcacattgttggttccttcattg 1073376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 18599225 - 18599099
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  18599225 cttttcattttgtctgatgtaagtattggcaaaaattcctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 18599126  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||||||||||||    
T  18599125 atctgcacattgttggttccttcattg 18599099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 83 - 213
Target Start/End: Complemental strand, 33321692 - 33321562
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||| ||||||||| || |||||| || ||||||||||||||| ||||    
T  33321692 cttttcattttgtctgatgtaaatattggcaaaaatccctttttggttagtcaatgacacttgcagccttttttattaacctaactattatgtaacgtta 33321593  T
Q  183 acatgcacattgttggttccttcattgattc 213  Q
    | |||||||||||||||||||||||||||||    
T  33321592 atatgcacattgttggttccttcattgattc 33321562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 83 - 213
Target Start/End: Original strand, 14831493 - 14831623
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||| ||||||| || | ||||||||| ||||||||||||||| ||||    
T  14831493 cttttcattttgtttgatgtaaatattggcaaaaatccctttttggttagtctatgacacttgctgttttttttataaacctaactattatgtaacgtta 14831592  T
Q  183 acatgcacattgttggttccttcattgattc 213  Q
    |  ||||||||||||||||||||||||||||    
T  14831593 atctgcacattgttggttccttcattgattc 14831623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 14888176 - 14888051
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||| |  ||||||| ||||||||||||| ||||||||||||||||||||    
T  14888176 cttttcattttgtctgatgtaagtattggcaaaaattcctttttggttagtcta-gaaacttgcaatctcttttataaacctaactattatgtaatgtta 14888078  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  || |||||||||||||||||||||    
T  14888077 atctgtacattgttggttccttcattg 14888051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 25540081 - 25540207
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||  |||||| |||||| |||||||||||| |||||||||||| ||||||||  ||||||||||||||| ||||    
T  25540081 cttttcattttgtctgatgtaaatattgacaaaaatcccttttaggttagtctatgacacttgcagtcttttttataagcctaactattatgtaacgtta 25540180  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||||||||||||    
T  25540181 atctgcacattgttggttccttcattg 25540207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 22374080 - 22373954
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||||||||||||||   |||||| |||||||||||| ||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  22374080 cttttcattttgtctgatgtaaatattcacaaaaatccctttttggttattctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 22373981  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    | |||||||||||||||||| ||||||    
T  22373980 atatgcacattgttggttccctcattg 22373954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 2521172 - 2521299
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcc-tttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtt 181  Q
    |||||||||||||||||||||| |||||  ||||||||| |||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| |||    
T  2521172 cttttcattttgtctgatgtaagtattgacaaaaattccctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtt 2521271  T
Q  182 aacatgcacattgttggttccttcattg 209  Q
    ||  || |||||||||||||||||||||    
T  2521272 aatttgtacattgttggttccttcattg 2521299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 17939530 - 17939656
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||| ||||||||||||||||| |||||||| ||||| |||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  17939530 cttttcattttttctgatgtaaatattggcaaaaattctttttttgttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 17939629  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  |||||||||||  |||||||||||    
T  17939630 atctgcacattgttaattccttcattg 17939656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 34855963 - 34856089
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||||||||| | |||| ||||||||||||||||||||||||||  ||||| | ||||||||||||| ||||||||||||||| ||||    
T  34855963 cttttcattttgtctgatgtaagtgttggcaaaaattcctttttggttagtctatgaaacttgtaatctcttttataaacctaactattatgtaacgtta 34856062  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  || |||||||||||| ||||||||    
T  34856063 atctgtacattgttggtttcttcattg 34856089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 83 - 195
Target Start/End: Complemental strand, 11934919 - 11934807
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||||||||| |||||| |||||| |||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  11934919 cttttcattttgtctgatgtaagtattggtaaaaatccctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 11934820  T
Q  183 acatgcacattgt 195  Q
    |  ||||||||||    
T  11934819 atctgcacattgt 11934807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 83 - 203
Target Start/End: Original strand, 15275666 - 15275786
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||  ||||||| ||||||||||||| |||||||||||||||  |||    
T  15275666 cttttcattttatctgatgtaaatattggtaaaaatccctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacctta 15275765  T
Q  183 acatgcacattgttggttcct 203  Q
    |   |||||||||||||||||    
T  15275766 atccgcacattgttggttcct 15275786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 4424494 - 4424620
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||| ||||| |||||||||||| |||||| |||||||||||||||||||  ||||||| ||||||||||||| ||||||||||| |||  |||    
T  4424494 cttttcatttcgtctggtgtaaatattggcaaaaatccctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatctaacatta 4424593  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  |||||||| |||||||||||||||    
T  4424594 atctgcacattattggttccttcattg 4424620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 124 - 209
Target Start/End: Original strand, 1931987 - 1932072
Alignment:
Q  124 tttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaacatgcacattgttggttccttcattg 209  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  1931987 tttggttagtctatgacacttgcggtctcttttataaatctaactattatgtaatgttaatatgcacattgttgtttccttcattg 1932072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 83 - 214
Target Start/End: Complemental strand, 13457083 - 13456953
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||| ||||||||||||| ||||||  |||||| |||||||| || |||||| ||||||||||||||| ||||||||||||||| ||||    
T  13457083 cttttcattttgtct-atgtaaatattggcaaaaatctctttttagttagtctttgacacttggagtctcttttataaacctaactattatgtaacgtta 13456985  T
Q  183 acatgcacattgttggttccttcattgattca 214  Q
    |  |||||||| |||||||||| |||| ||||    
T  13456984 atctgcacattattggttcctttattggttca 13456953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 34321100 - 34321227
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctctttt-ataaatctaactattatgtaatgtt 181  Q
    ||||||||||||||||||||||||||||| |||||  | |||||||||||| |||| |||||||||| | |||| ||||| ||||||||||||||| |||    
T  34321100 cttttcattttgtctgatgtaaatattggcaaaaagccttttttggttagtatatgacacttgcagttttttttcataaacctaactattatgtaacgtt 34321199  T
Q  182 aacatgcacattgttggttccttcattg 209  Q
    ||  |||||||||||| |||||||||||    
T  34321200 aatctgcacattgttgattccttcattg 34321227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 35041116 - 35041227
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||| ||||||||||||| |||||| ||||||||||||||| |||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  35041116 cttttcattttgtctaatgtaaatattggcaaaaatccctttttggttagtcaatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 35041215  T
Q  183 acatgcacattg 194  Q
    |  |||||||||    
T  35041216 atttgcacattg 35041227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 193
Target Start/End: Original strand, 18311814 - 18311924
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||| ||||||||||||| |||||| |||||||| |||||| |||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  18311814 cttttcattttgtctaatgtaaatattggcaaaaatccctttttgtttagtcaatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 18311913  T
Q  183 acatgcacatt 193  Q
    |  ||||||||    
T  18311914 atctgcacatt 18311924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 13457259 - 13457178
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  13457259 tgtgatgatagaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagtag 13457178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 14831317 - 14831398
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||||||||| |||||||    
T  14831317 tgtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcactgaagaacttgcatgttcgagttgttccaaagtag 14831398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 14888351 - 14888271
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||  |||||||||||| |||||||    
T  14888351 gtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcatagaagaacttgcaaattcgagttgttccaaagtag 14888271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 11935094 - 11935015
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagta 81  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||  |||||||||||| ||||||    
T  11935094 gtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcaccgaagaacttgcaaattcgagttgttccaaagta 11935015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 28228926 - 28228845
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||  ||||||||||||||| |||||||    
T  28228926 tgtgatggaagaaggtgataagctcatctttgatctcgaaaagtcaccgaagaacttatacgttcgagttgttccaaagtag 28228845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 33321868 - 33321787
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||| |||| ||||||||||| |||||| ||||||||||||| ||||||||||||| |||||||    
T  33321868 tgtgatggaagaaggtggtaagttcatctttgatctcgagaagtcaccgaagaacttgcatgttcgagttgttccaaagtag 33321787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 1073677 - 1073597
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  1073677 gtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 1073597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 18599400 - 18599320
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  18599400 gtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 18599320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 35040941 - 35041021
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||  | |||||||||| |||||||    
T  35040941 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcagagaagaacttgcaaatccgagttgttccaaagtag 35041021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 17939355 - 17939435
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  ||| ||||||||  |||||||||||| |||||||    
T  17939355 gtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaataacttgcaaattcgagttgttccaaagtag 17939435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 18311640 - 18311719
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  18311640 gtgatggaagaaggtggta-gctcatatttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 18311719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 22374255 - 22374175
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  || ||||||||| |||||||    
T  22374255 gtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaatttgagttgttccaaagtag 22374175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 34855788 - 34855868
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  34855788 gtgatggaagaaggtggtaagctcattttttatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 34855868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 1931865 - 1931939
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||| ||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1931865 tgtgatagaagaaggtggtaagctcat-------ctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 1931939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 122 - 209
Target Start/End: Original strand, 30044255 - 30044342
Alignment:
Q  122 tttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaacatgcacattgttggttccttcattg 209  Q
    ||||| |||||||||||  ||||||| ||||||||||||| | ||||||||||||| |||||  ||||||||||||||||||||||||    
T  30044255 tttttagttagtctatgaaacttgcaatctcttttataaaccgaactattatgtaacgttaatctgcacattgttggttccttcattg 30044342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 2520996 - 2521068
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 74  Q
    |||||||||||||||||||||||||| ||||||||||||||||||   |||||||||||  ||||||||||||    
T  2520996 gtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacataagaacttgcaaattcgagttgttc 2521068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 15275491 - 15275571
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||  ||||||||||||  || ||||||||| |||||||    
T  15275491 gtgatggaagaaagtggtaagctcatctttgatctcgaaaagtcactgaagaacttgcatatttgagttgttcgaaagtag 15275571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 34320924 - 34320997
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 74  Q
    ||||||||||||||||| ||| ||||| |||||||||||||| ||| | ||||||||||| |||||||||||||    
T  34320924 tgtgatggaagaaggtgataatctcatctttgatctcgaaaaatcaccaaagaacttgcatgttcgagttgttc 34320997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 4424319 - 4424399
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||| |||||||||||||||||||| ||||||||| |||||| |   |||||||||||  |||||||||||| |||||||    
T  4424319 gtgatagaagaaggtggtaagctcatctttgatctccaaaagttacaaaagaacttgcaaattcgagttgttccaaagtag 4424399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 308
Target Start/End: Original strand, 19813245 - 19813332
Alignment:
Q  221 tatgttggccaaaattcggcaacaaagacgtctcagaaggtcctctgccatagccctcttgaaccactcctacggaaggaggctgtga 308  Q
    |||||||||||||| |||||||||||||||| |  ||||||||||   | || ||||| ||||| ||||| ||||||||||| |||||    
T  19813245 tatgttggccaaaactcggcaacaaagacgtgttcgaaggtcctccatcgtatccctcctgaacaactcccacggaaggaggttgtga 19813332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 308
Target Start/End: Original strand, 32689535 - 32689622
Alignment:
Q  221 tatgttggccaaaattcggcaacaaagacgtctcagaaggtcctctgccatagccctcttgaaccactcctacggaaggaggctgtga 308  Q
    |||||||||||||| |||||||||||||| | |  ||||||||||   | || ||||| ||||| ||||| |||||||||||||||||    
T  32689535 tatgttggccaaaactcggcaacaaagacttgtttgaaggtcctccatcgtatccctcctgaacaactcccacggaaggaggctgtga 32689622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 82
Target Start/End: Original strand, 25539943 - 25539986
Alignment:
Q  39 aaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||| ||||||||||||| ||||||||||||| |||||||    
T  25539943 aaaagtcaccgaagaacttgcatgttcgagttgttccaaagtag 25539986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 8e-49; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 33929784 - 33929910
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||    
T  33929784 cttttcattttgtctgatgtaaatattgacaaaaattcctttttggttagtctatgacacttgcagtctcttttataaacctaactattatgtaacgtta 33929883  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||||||||||||    
T  33929884 atctgcacattgttggttccttcattg 33929910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 83 - 213
Target Start/End: Complemental strand, 33707008 - 33706878
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||| ||||    
T  33707008 cttttcattttgtctgatgtaaatattggcaaaaatccctttttggttagtctatgacacttgcagtcttttttataaacctaactattatgtaacgtta 33706909  T
Q  183 acatgcacattgttggttccttcattgattc 213  Q
    |  ||||||||||||||||||||||| ||||    
T  33706908 atctgcacattgttggttccttcattaattc 33706878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 41780818 - 41780944
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||    
T  41780818 cttttcattttgtctgatgtaaatattggcaaaaatccctttttggttagtctatgacacttgcagtctcttttataaacctaactattatgtaacgtta 41780917  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  |||| |||||||||||||||||||    
T  41780918 atctgcatattgttggttccttcattg 41780944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 85 - 209
Target Start/End: Original strand, 290543 - 290663
Alignment:
Q  85 tttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaac 184  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |    | |||||||||||||||||||||||||||||||||||||     
T  290543 tttcattttgtctgatgtaaatattggaaaaaattcctttttggttagtctatgac----ggagtctcttttataaatctaactattatgtaatgttaat 290638  T
Q  185 atgcacattgttggttccttcattg 209  Q
    |||||||||||||||||||||||||    
T  290639 atgcacattgttggttccttcattg 290663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 33611369 - 33611243
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  33611369 cttttcattttgtctgatgtaagtattggcaaaaattcctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 33611270  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||||||||||||    
T  33611269 atctgcacattgttggttccttcattg 33611243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 7285667 - 7285793
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||||||||| |||||| |||||| |||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  7285667 cttttcattttgtctgatgtaagtattggcaaaaatccctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 7285766  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||||||||||||    
T  7285767 atctgcacattgttggttccttcattg 7285793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 30689299 - 30689425
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  30689299 cttttcattttgtctgatgtaagtattggcaaaaattcctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 30689398  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  || |||||||||||||||||||||    
T  30689399 atctgtacattgttggttccttcattg 30689425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 2195155 - 2195281
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||||||||| |||||  ||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  2195155 cttttcattttgtctgatgtaagtattgacaaaaattcctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 2195254  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  || |||||||||||||||||||||    
T  2195255 atctgtacattgttggttccttcattg 2195281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 3150833 - 3150707
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||  |||||||||||| |||||| |||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||||||||    
T  3150833 cttttcattttgtcttgtgtaaatattggcaaaaatccctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaatgtta 3150734  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||| ||||||||||||||||||    
T  3150733 atctgcactttgttggttccttcattg 3150707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 3210429 - 3210303
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||| | |||||| | ||||| |||||| |||| |||||||||||||||||||||| ||||||||||||||| ||||    
T  3210429 cttttcattttgtctgatgtaaatattagcaaaaatcctttttttgttagtttatgacacttgcagtctcttttataaacctaactattatgtaacgtta 3210330  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||||||||||||    
T  3210329 atctgcacattgttggttccttcattg 3210303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 4882262 - 4882388
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||| | |||||| ||||||||||||||||||   ||||||| ||||||||||||| ||||||||||||||| ||||    
T  4882262 cttttcattttgtctgatgtaaatattcgtaaaaatccctttttggttagtctattaaacttgcaatctcttttataaacctaactattatgtaacgtta 4882361  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||||||||||||    
T  4882362 atctgcacattgttggttccttcattg 4882388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 83 - 213
Target Start/End: Complemental strand, 20996173 - 20996043
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||||||||| |||||  |||||| |||||||||||| ||| || |||||||| ||||||||||||| ||||||||||||||| ||||    
T  20996173 cttttcattttgtctgatgtaagtattgtcaaaaatccctttttggttaatctttgacacttgcaatctcttttataaacctaactattatgtaacgtta 20996074  T
Q  183 acatgcacattgttggttccttcattgattc 213  Q
    |  ||||||||||||||||||||||||||||    
T  20996073 atctgcacattgttggttccttcattgattc 20996043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 26321304 - 26321178
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||||||||| |||||| |||||||||| |||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  26321304 cttttcattttgtctgatgtaagtattggcaaaaattcctgtttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 26321205  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  || |||||||||||||||||||||    
T  26321204 atctgtacattgttggttccttcattg 26321178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 83 - 205
Target Start/End: Original strand, 9702242 - 9702364
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||| ||||||||||||||||| ||||||  |||||| ||||||||||| |||||| ||||||||||||||| ||||||||||||||| ||||    
T  9702242 cttttcattttatctgatgtaaatattggcaaaaatctcttttttgttagtctatgacacttgtagtctcttttataaacctaactattatgtaacgtta 9702341  T
Q  183 acatgcacattgttggttccttc 205  Q
    |  ||||||||||||||||||||    
T  9702342 atctgcacattgttggttccttc 9702364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 20349913 - 20350039
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||| ||||||||||||||||| |||||| || ||||||||||| ||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  20349913 cttttcattttttctgatgtaaatattggcaaaaatcccattttggttagtttatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 20350012  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||||||||||||    
T  20350013 atctgcacattgttggttccttcattg 20350039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 83 - 214
Target Start/End: Original strand, 19395346 - 19395477
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||| ||||||  |||||| |||||||| || |||||| ||||||||||||||| ||||||||||||||| ||||    
T  19395346 cttttcattttgtctgatgtaaatattggcaaaaatatctttttagttagtctttgacacttgaagtctcttttataaacctaactattatgtaacgtta 19395445  T
Q  183 acatgcacattgttggttccttcattgattca 214  Q
       |||||||||||||||| ||||||| ||||    
T  19395446 gtctgcacattgttggttctttcattggttca 19395477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 83 - 214
Target Start/End: Complemental strand, 31295903 - 31295772
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||  ||||||  |||||| |||||||| || |||||| ||||||||||||||| ||||||||||||||| ||||    
T  31295903 cttttcattttgtctgatgtaaatattgacaaaaatctctttttagttagtctttgacacttggagtctcttttataaacctaactattatgtaacgtta 31295804  T
Q  183 acatgcacattgttggttccttcattgattca 214  Q
    |  |||||||||||||||| ||||||| ||||    
T  31295803 atctgcacattgttggttctttcattggttca 31295772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 83 - 205
Target Start/End: Original strand, 3028744 - 3028866
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||  ||||||| |||||||||||||  |||||||||||||| ||||    
T  3028744 cttttcattttgtctgatgtaaatattggcaaaaatccctttttcgttagtctatgaaacttgcaatctcttttataaacttaactattatgtaacgtta 3028843  T
Q  183 acatgcacattgttggttccttc 205  Q
    |  ||||||||||| ||||||||    
T  3028844 atttgcacattgttagttccttc 3028866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 3397367 - 3397241
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||| |||||||||||| |||||| |||||||||||||||||||  ||||||| ||||||||||||| ||||| |||||||||  |||    
T  3397367 cttttcattttgtctggtgtaaatattggcaaaaatccctttttggttagtctatgaaacttgcaatctcttttataaacctaacgattatgtaacatta 3397268  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  |||||||||||||||| |||||||    
T  3397267 atctgcacattgttggttcattcattg 3397241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 85 - 209
Target Start/End: Complemental strand, 1852157 - 1852032
Alignment:
Q  85 tttcattttgtctgatgtaaatattgggaaaaattcc-tttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaa 183  Q
    ||||||||||||||||||||||||||  ||||| ||| |||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| || ||    
T  1852157 tttcattttgtctgatgtaaatattgacaaaaaatccctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtaaa 1852058  T
Q  184 catgcacattgttggttccttcattg 209  Q
      ||||||||||||||||||||||||    
T  1852057 tttgcacattgttggttccttcattg 1852032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 33929608 - 33929689
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33929608 tgtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcaccgaagaacttgcacgttcgagttgttcaaaagtag 33929689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 17996570 - 17996681
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  17996570 cttttcattttgtctaatgtaaatattggcaaaaattcctttttggttagtcaatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 17996669  T
Q  183 acatgcacattg 194  Q
    |  |||||||||    
T  17996670 atctgcacattg 17996681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 19447993 - 19448119
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||  |||||| | ||||| |||||||||||  ||||||| |||||||||||||  |||||||||||||  ||||    
T  19447993 cttttcattttgtctgatgtaaatattgacaaaaatcctttttttgttagtctatgaaacttgcaatctcttttataaacttaactattatgtatcgtta 19448092  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||||||||||||    
T  19448093 atctgcacattgttggttccttcattg 19448119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 201
Target Start/End: Original strand, 27065862 - 27065980
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||| |||||||||||| |||||| |||||||||||||||||||  ||||||| ||||||||||||| |||| |||||||||| ||||    
T  27065862 cttttcattttgtctggtgtaaatattggcaaaaatccctttttggttagtctatgaaacttgcaatctcttttataaacctaattattatgtaacgtta 27065961  T
Q  183 acatgcacattgttggttc 201  Q
    |  | ||||||||||||||    
T  27065962 atctacacattgttggttc 27065980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 20757951 - 20758062
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||| ||||||||||||| ||||||  |||||||||||||| |||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  20757951 cttttcattttgtctaatgtaaatattggcaaaaatcgctttttggttagtcaatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 20758050  T
Q  183 acatgcacattg 194  Q
    |  |||||||||    
T  20758051 atctgcacattg 20758062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 31296079 - 31295998
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  31296079 tgtgatgatagaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagtag 31295998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 41780642 - 41780723
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||| |||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  41780642 tgtgatggaataaggtggtaagctcatcttttatctcgaaaagtcatcgaagaactagcacgttcgagttgttccaaagtag 41780723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 20996348 - 20996276
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 74  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||    
T  20996348 gtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcacgttcgagttgttc 20996276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 21029923 - 21030003
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||||||||| |||||||    
T  21029923 gtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcactgaagaacttgcaagttcgagttgttccaaagtag 21030003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 38934292 - 38934372
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||  |||||||||||| |||||||    
T  38934292 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatagaagaaattgcaaattcgagttgttccaaagtag 38934372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 21030098 - 21030225
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcct-ttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtt 181  Q
    |||||||||||||||   ||||||||||  |||||| ||  ||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| |||    
T  21030098 cttttcattttgtctagagtaaatattgacaaaaatcccccttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtt 21030197  T
Q  182 aacatgcacattgttggttccttcattg 209  Q
    ||  |||||||||||||||| |||||||    
T  21030198 aatctgcacattgttggttctttcattg 21030225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 83 - 193
Target Start/End: Complemental strand, 12588509 - 12588400
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||| ||||| ||||||||||||||| | |||| | ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||| ||||    
T  12588509 ctttttattttatctgatgtaaatattagcaaaa-tccctttttggttagtctatgacacttgcagtcttttttataaacctaactattatgtaacgtta 12588411  T
Q  183 acatgcacatt 193  Q
    |  ||||||||    
T  12588410 atctgcacatt 12588400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 3210603 - 3210534
Alignment:
Q  3 tgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgt 72  Q
    ||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  3210603 tgatggaagaatgtggtaagctcatctttgatctcaaaaagtcatcgaagaacttgcacgttcgagttgt 3210534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 9702070 - 9702139
Alignment:
Q  5 atggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 74  Q
    |||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  9702070 atggaagaagatggtaagctcatctttgatctcgaaaagtcaccgaagaacttgcacgttcgagttgttc 9702139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 12588685 - 12588604
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||||||||||||| |||||| | ||||||||| ||||||||||||| ||||||||||||| |||||||    
T  12588685 tgtgatggaagaaggtggtaagctcatctttgattttgaaaagtcaccgaagaacttgcatgttcgagttgttccaaagtag 12588604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 19395170 - 19395251
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||  ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||| |||||||    
T  19395170 tgtgatgatagaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcaagttgttctaaagtag 19395251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 3151008 - 3150928
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  3151008 gtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 3150928  T

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Target: chr5; HSP #38
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 3397542 - 3397462
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  3397542 gtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 3397462  T

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Target: chr5; HSP #39
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 7285492 - 7285572
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  7285492 gtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 7285572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 17996395 - 17996475
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  17996395 gtgatggaagaaggtggtaaactcatatttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 17996475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 33611544 - 33611464
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  33611544 gtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 33611464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 122 - 209
Target Start/End: Complemental strand, 35540109 - 35540022
Alignment:
Q  122 tttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaacatgcacattgttggttccttcattg 209  Q
    ||||| |||||||||||  ||||||| ||||||||||||| ||||||||||||||| |||||  ||||||||||||||||||||||||    
T  35540109 tttttagttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgttaatttgcacattgttggttccttcattg 35540022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 83 - 194
Target Start/End: Original strand, 38934467 - 38934578
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||| ||||||||||||  |||||| | ||||||||||||| |||  ||||||| ||||||||||||| ||| ||||||||||| ||||    
T  38934467 cttttcattttgtctaatgtaaatattgacaaaaatccatttttggttagtcaatgaaacttgcaatctcttttataaacctacctattatgtaacgtta 38934566  T
Q  183 acatgcacattg 194  Q
    |  |||||||||    
T  38934567 atctgcacattg 38934578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 10513330 - 10513253
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataa 160  Q
    ||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||  ||||||| ||||||||||||    
T  10513330 cttttcattttgtctaatgtaaatattggcaaaaattcctctttggttagtctatgaaacttgcaatctcttttataa 10513253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 1852334 - 1852254
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||| ||||||||||||||||||   |||||||||||  |||||||||||| |||||||    
T  1852334 gtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacataagaacttgcaaattcgagttgttccaaagtag 1852254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 10513505 - 10513425
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||| ||||||||||||||||||   |||||||||||  |||||||||||| |||||||    
T  10513505 gtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacaaaagaacttgcaaattcgagttgttccaaagtag 10513425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 26321479 - 26321399
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||| |  |||||||||||| |||||||    
T  26321479 gtgatggaagaaggtggtaagctcatctttgatcccgaaaagtcatagaagaacttggaaattcgagttgttccaaagtag 26321399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 122 - 209
Target Start/End: Complemental strand, 34374570 - 34374483
Alignment:
Q  122 tttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaacatgcacattgttggttccttcattg 209  Q
    ||||| |||||||||||  ||||||| ||||||||||||| ||||||||||||||| |||||  |||| |||||||||||||||||||    
T  34374570 tttttagttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgttaatctgcatattgttggttccttcattg 34374483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 2194980 - 2195052
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 74  Q
    |||||||||||||||||||||||||| || |||||||||||||||  ||||||||||||  ||||||||||||    
T  2194980 gtgatggaagaaggtggtaagctcatcttggatctcgaaaagtcacagaagaacttgcaaattcgagttgttc 2195052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 4882088 - 4882160
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 74  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  |||||||||| |  ||||||||||||    
T  4882088 gtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgaaaattcgagttgttc 4882160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 19447818 - 19447898
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||| ||||||||| |||||| |||||||||||  ||||||||||||  |||||||||||| |||||||    
T  19447818 gtgatggaagaaggtgataagctcatctttgatttcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 19447898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 20757776 - 20757856
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||| |||||||||||||| |||||||||||||||||||||||   |||||||||||  |||||||||||| |||||||    
T  20757776 gtgatgaaagaaggtggtaagatcatatttgatctcgaaaagtcacataagaacttgcaaattcgagttgttccaaagtag 20757856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 3028566 - 3028645
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||  ||||||||||||  |||||||||||  |||||||    
T  3028566 gtgatggaagaaggtggtaagctcatctttgatctcgaaaag-cacagaagaacttgcaaattcgagttgttacaaagtag 3028645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 20349738 - 20349810
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 74  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||  ||||||||||||  || |||||||||    
T  20349738 gtgatagaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaatttgagttgttc 20349810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 30689124 - 30689204
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||  ||||||  ||||  |||||||||||| |||||||    
T  30689124 gtgatggaagaaggtggtaaactcatctttgatctcgaaaagtcacagaagaaagtgcaaattcgagttgttccaaagtag 30689204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 287379 - 287341
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcga 39  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  287379 tgtgatggaagaaggtggtaagctcatctttgatctcga 287341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 152 - 209
Target Start/End: Complemental strand, 10512524 - 10512467
Alignment:
Q  152 cttttataaatctaactattatgtaatgttaacatgcacattgttggttccttcattg 209  Q
    |||||||||| |||||||||||||||  ||||  ||||||||||||||| ||||||||    
T  10512524 cttttataaacctaactattatgtaaccttaatctgcacattgttggtttcttcattg 10512467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 27065715 - 27065793
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||  ||| ||||||||||||||||||  |||||| || ||  |||||||||||  |||||||    
T  27065715 gtgatggaagaaggtggtaag--catctttgatctcgaaaagtcacagaagaatttacaaattcgagttgttgcaaagtag 27065793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 100624 - 100750
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||| ||| ||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  100624 cttttcattttttctaatgtaaatattggcaaaaatccctttttggttagtctatgacacttgcagtctcttttataaacctaactattatgtaatgtta 100723  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||||||||||||    
T  100724 atctgcacattgttggttccttcattg 100750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 5e-44; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 83 - 213
Target Start/End: Original strand, 41977227 - 41977357
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||| ||||||  |||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||| ||||    
T  41977227 cttttcattttgtctgatgtaaatattggcaaaaatctctttttggttagtctatgacacttgcagtcttttttataaacctaactattatgtaacgtta 41977326  T
Q  183 acatgcacattgttggttccttcattgattc 213  Q
    |  ||||||||||| ||||||||||||||||    
T  41977327 atctgcacattgttagttccttcattgattc 41977357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 83 - 212
Target Start/End: Original strand, 12760243 - 12760372
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||||| |||||||||| |||||| ||||||||||||||||||| |||| ||||||| ||||||||| ||||||||||||||| ||||    
T  12760243 cttttcattttgtctgatataaatattggcaaaaatccctttttggttagtctatgacactagcagtcttttttataaacctaactattatgtaacgtta 12760342  T
Q  183 acatgcacattgttggttccttcattgatt 212  Q
    |  |||||||||||||||||||||||||||    
T  12760343 atctgcacattgttggttccttcattgatt 12760372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 83 - 213
Target Start/End: Complemental strand, 6477712 - 6477582
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||| |||||||||||| |||||| |||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||||||||    
T  6477712 cttttcattttgtctggtgtaaatattggcaaaaatccctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaatgtta 6477613  T
Q  183 acatgcacattgttggttccttcattgattc 213  Q
    |  |||||||  |||||||||||||||||||    
T  6477612 atctgcacatcattggttccttcattgattc 6477582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 83 - 205
Target Start/End: Complemental strand, 12250418 - 12250296
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||| ||||||||||||||||| |||||| ||||||| ||||||||||| |||||| ||||||||||||||| ||||||||||||||| ||||    
T  12250418 cttttcattttatctgatgtaaatattggcaaaaatcccttttttgttagtctatgacacttgtagtctcttttataaacctaactattatgtaacgtta 12250319  T
Q  183 acatgcacattgttggttccttc 205  Q
    | |||||||||||||||||||||    
T  12250318 atatgcacattgttggttccttc 12250296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 14079049 - 14078923
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  14079049 cttttcattttgtctgatgtaagtattggcaaaaattcctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 14078950  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  || |||||||||||||||||||||    
T  14078949 atctgtacattgttggttccttcattg 14078923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 29433807 - 29433933
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||| |||||||||||| |  |||||| ||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||    
T  29433807 cttttcattttgtttgatgtaaatatcgacaaaaatccctttttggttagtctatgactcttgcagtctcttttataaacctaactattatgtaatgtta 29433906  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||||||||||||    
T  29433907 atctgcacattgttggttccttcattg 29433933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 39204399 - 39204525
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||| ||||||||||||||||| |||||| |||||||||||||| |||| |||||||| ||||||||||||| ||||||||||||||| ||||    
T  39204399 cttttcattttatctgatgtaaatattggcaaaaatccctttttggttagtttatgacacttgcaatctcttttataaacctaactattatgtaacgtta 39204498  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||||||||||||    
T  39204499 atctgcacattgttggttccttcattg 39204525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 83 - 205
Target Start/End: Original strand, 39444789 - 39444911
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||| ||||||||||||||||| |||||| ||||||| ||||||||||| |||||| ||||||||||||||| ||||||||||||||| ||||    
T  39444789 cttttcattttatctgatgtaaatattggcaaaaatcccttttttgttagtctatgacacttgtagtctcttttataaacctaactattatgtaacgtta 39444888  T
Q  183 acatgcacattgttggttccttc 205  Q
    | |||||||||||||||||||||    
T  39444889 atatgcacattgttggttccttc 39444911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 83 - 201
Target Start/End: Original strand, 41907625 - 41907743
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||  ||||||  ||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  41907625 cttttcattttgtctgatgtaaatattgtcaaaaatctcttttcggttagtctatgacacttgcagtctcttttataaacctaactattatgtaatgtta 41907724  T
Q  183 acatgcacattgttggttc 201  Q
    | |||||||||||||||||    
T  41907725 atatgcacattgttggttc 41907743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 83 - 214
Target Start/End: Complemental strand, 23966739 - 23966608
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||| ||||||  |||||| |||||||| || |||||| ||||||||||||||| ||||||||||||||| ||||    
T  23966739 cttttcattttgtctgatgtaaatattggcaaaaatctctttttagttagtctttgacacttggagtctcttttataaacctaactattatgtaacgtta 23966640  T
Q  183 acatgcacattgttggttccttcattgattca 214  Q
    |  |||||||| ||||||||||||||||||||    
T  23966639 atctgcacattattggttccttcattgattca 23966608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 83 - 200
Target Start/End: Complemental strand, 22947021 - 22946904
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||  |||||| ||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||| ||||    
T  22947021 cttttcattttgtctgatgtaaatattgacaaaaatccctttttggttagtctatgacacttgcattttcttttataaatctaactattatgtaacgtta 22946922  T
Q  183 acatgcacattgttggtt 200  Q
    |  |||||||||||||||    
T  22946921 atctgcacattgttggtt 22946904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 83 - 212
Target Start/End: Original strand, 41156407 - 41156536
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||  |||||| ||||||||||||||||||| |||||||||||| ||||||||| ||| ||||||| ||| ||||    
T  41156407 cttttcattttgtctgatgtaaatattgtcaaaaatccctttttggttagtctatgacacttgcagtcttttttataaacctagctattatataacgtta 41156506  T
Q  183 acatgcacattgttggttccttcattgatt 212  Q
    |  ||||||||||||||| |||||||||||    
T  41156507 atctgcacattgttggtttcttcattgatt 41156536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 83 - 214
Target Start/End: Original strand, 37029606 - 37029737
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||  ||||||  |||||| |||||||| || |||||| ||||||||||||||| ||||||||||||||| ||||    
T  37029606 cttttcattttgtctgatgtaaatattgacaaaaatctctttttagttagtctttgacacttggagtctcttttataaacctaactattatgtaacgtta 37029705  T
Q  183 acatgcacattgttggttccttcattgattca 214  Q
    |  |||||||||||||||||||||||| ||||    
T  37029706 atctgcacattgttggttccttcattggttca 37029737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 22333340 - 22333214
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||| |||||||||||| |||||| |||||||||||||||||||  ||||||| ||||||||||||| ||||||| ||||||| ||||    
T  22333340 cttttcattttgtctggtgtaaatattggcaaaaatccctttttggttagtctatgaaacttgcaatctcttttataaacctaactaatatgtaacgtta 22333241  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  |||||||||||||||| |||||||    
T  22333240 atctgcacattgttggttctttcattg 22333214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 38961937 - 38962063
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||  ||||||| |||||||||||||  |||||||||||||| ||||    
T  38961937 cttttcatcttgtctggtgtaaatattggcaaaaattcctttttggttagtctatgaaacttgcaatctcttttataaacttaactattatgtaacgtta 38962036  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  || |||||||||||||||||||||    
T  38962037 atctgtacattgttggttccttcattg 38962063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 38992281 - 38992407
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||  ||||||| |||||||||||||  |||||||||||||| ||||    
T  38992281 cttttcatcttgtctggtgtaaatattggcaaaaattcctttttggttagtctatgaaacttgcaatctcttttataaacataactattatgtaacgtta 38992380  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  || |||||||||||||||||||||    
T  38992381 atctgtacattgttggttccttcattg 38992407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 41628659 - 41628785
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||| ||||   ||||||| ||||||||||| |||||||| ||||||||||||| ||||||||||||||| ||||    
T  41628659 cttttcattttgtctgatgtaaatattggcaaaagaccctttttcgttagtctatgacacttgcaatctcttttataaacctaactattatgtaacgtta 41628758  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  |||||||| |||||||||||||||    
T  41628759 atctgcacattattggttccttcattg 41628785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 45293796 - 45293670
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||| |||||| | ||||||||||||||||| |||||||||| | ||||||||| |||||||||||| || ||||    
T  45293796 cttttcattttgtctgatgtaaatattggcaaaaatccttttttggttagtctatgacacttgcagttttttttataaacctaactattatgcaacgtta 45293697  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  |||||||||||| |||||||||||    
T  45293696 atttgcacattgttgattccttcattg 45293670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 83 - 208
Target Start/End: Complemental strand, 19395782 - 19395657
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||| |||||||||||| |||||| |||||||| ||||||||||  ||||||| |||||||||||||  |||||||||||||| ||||    
T  19395782 cttttcattttgtctggtgtaaatattggcaaaaatccctttttgattagtctatgaaacttgcaatctcttttataaacttaactattatgtaacgtta 19395683  T
Q  183 acatgcacattgttggttccttcatt 208  Q
    |  |||||||||||||||||||||||    
T  19395682 atctgcacattgttggttccttcatt 19395657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 84 - 209
Target Start/End: Original strand, 30826220 - 30826349
Alignment:
Q  84 ttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaac----tattatgtaatg 179  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||| |||||    ||||||||||||    
T  30826220 ttttcattttgtctgatgtaagtattggcaaaaattcctttttggttagtctatgaaacttgcaatctcttttataaacctaactatatattatgtaatg 30826319  T
Q  180 ttaacatgcacattgttggttccttcattg 209  Q
    ||||  || |||||||||||||||||||||    
T  30826320 ttaatttgtacattgttggttccttcattg 30826349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 83 - 214
Target Start/End: Complemental strand, 6300836 - 6300705
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||| ||||||||||| ||||||  |||||| |||||||| || |||||| ||||||||||||||| ||||||||||||||| ||||    
T  6300836 cttttcattttgtctgaagtaaatattggcaaaaatctctttttagttagtctttgacacttggagtctcttttataaacctaactattatgtaacgtta 6300737  T
Q  183 acatgcacattgttggttccttcattgattca 214  Q
    |  ||||||||||||||| |||||||| ||||    
T  6300736 atctgcacattgttggtttcttcattggttca 6300705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 33424477 - 33424352
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||   ||    
T  33424477 cttttcattttgtctaatgtaagtattggcaaaaattcctttttggttagtctatgaaacttgcagtctcttttataaacctaactattatgtaa-ccta 33424379  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  || |||||||||||||||||||||    
T  33424378 atctgtacattgttggttccttcattg 33424352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 83 - 214
Target Start/End: Original strand, 44940210 - 44940341
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||  ||||||  |||||| |||||||| || |||||| ||||||||||||||| ||||||||||||||| || |    
T  44940210 cttttcattttgtctgatgtaaatattgacaaaaatctctttttagttagtctttgacacttggagtctcttttataaacctaactattatgtaacgtca 44940309  T
Q  183 acatgcacattgttggttccttcattgattca 214  Q
    |  |||||||| ||||||||||||||| ||||    
T  44940310 atctgcacattattggttccttcattggttca 44940341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 91 - 209
Target Start/End: Complemental strand, 42811148 - 42811030
Alignment:
Q  91 tttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaacatgcac 190  Q
    |||||||| |||||||||||| ||||| |||||||||||||| |||||  ||||||| ||||||||||||| ||||||||||||| |  ||||  |||||    
T  42811148 tttgtctggtgtaaatattggcaaaaactcctttttggttagcctatgaaacttgcaatctcttttataaacctaactattatgtgactttaatctgcac 42811049  T
Q  191 attgttggttccttcattg 209  Q
    |||||||||||||||||||    
T  42811048 attgttggttccttcattg 42811030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 41907450 - 41907531
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  41907450 tgtgatggaagaaggtggtaagttcatctttgatctcgaaaagtcaccgaagaacttgcacgttcgagttgttccaaagtag 41907531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 39204223 - 39204295
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgtt 73  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  39204223 tgtgatggaagaaggtggtaaactcatctttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgtt 39204295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 83 - 214
Target Start/End: Complemental strand, 42061013 - 42060883
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||  ||||  |  ||||| |||||||| || |||||| ||||||||||||||| ||||||||||||||| ||||    
T  42061013 cttttcattttgtctgatgtaaatattgacaaaatcta-tttttagttagtctttgacacttggagtctcttttataaacctaactattatgtaacgtta 42060915  T
Q  183 acatgcacattgttggttccttcattgattca 214  Q
    |  |||||||| ||| ||||||||||||||||    
T  42060914 atctgcacattattgattccttcattgattca 42060883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 6301012 - 6300931
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  6301012 tgtgatgatagaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagtag 6300931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 23966915 - 23966834
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  23966915 tgtgatgatagaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagtag 23966834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 37029430 - 37029511
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  37029430 tgtgatgatagaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagtag 37029511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 42061189 - 42061108
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  42061189 tgtgatgatagaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagtag 42061108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 44940034 - 44940115
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  44940034 tgtgatgatagaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagtag 44940115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 12760067 - 12760148
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||| ||| ||||||||| |||||||    
T  12760067 tgtgatggaagaaggtggtaagctcatctttgatttcgaaaagtcaccgaagaacttgcatgtttgagttgttccaaagtag 12760148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 41156239 - 41156312
Alignment:
Q  9 aagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||| |||||||    
T  41156239 aagaaggtggtaagctcatttttgatctcgaaaagtcaccgaagaacttgcatgttcgagttgttccaaagtag 41156312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 41977051 - 41977132
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||| ||| ||||||||| |||||||    
T  41977051 tgtgatggaagaaggtggtaaactcatctttgatctcgaaaagtcaccgaagaacttgcatgtttgagttgttccaaagtag 41977132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 14079224 - 14079144
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  14079224 gtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 14079144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 19247880 - 19248002
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||| ||||||||||||||||||||||| |||||| | |||||||||||||||||  ||||||||| | |||||||||    |||||||||||| ||||    
T  19247880 ctttttattttgtctgatgtaaatattggcaaaaatccttttttggttagtctatgatacttgcagt-ttttttataaa---cactattatgtaacgtta 19247975  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  |||||||||||| |||||||||||    
T  19247976 atttgcacattgttgattccttcattg 19248002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 19321064 - 19321186
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||| ||||||||||||||||||||||| |||||| | |||||||||||||||||  ||||||||| | |||||||||    |||||||||||| ||||    
T  19321064 ctttttattttgtctgatgtaaatattggcaaaaatccttttttggttagtctatgatacttgcagt-ttttttataaa---cactattatgtaacgtta 19321159  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  |||||||||||| |||||||||||    
T  19321160 atttgcacattgttgattccttcattg 19321186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 23523036 - 23522956
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||  |||||| ||||| |||||||    
T  23523036 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcacagaagaacttgcaaattcgagctgttccaaagtag 23522956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 19395956 - 19395877
Alignment:
Q  3 tgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  19395956 tgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 19395877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 23522861 - 23522750
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||| ||||||||||||| ||||||  |||||||||||||| |||  ||||||| ||||||||||||| || |||||||| ||| ||||    
T  23522861 cttttcattttgtctaatgtaaatattggcaaaaatcactttttggttagtcaatgaaacttgcaatctcttttataaaccttactattatataacgtta 23522762  T
Q  183 acatgcacattg 194  Q
    |  |||||||||    
T  23522761 atctgcacattg 23522750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 205
Target Start/End: Complemental strand, 23626563 - 23626441
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||| ||||||||||||||||  ||||||  |||||  ||||||||||| |||||| | ||| ||||||||| ||||||||||| |||  |||    
T  23626563 cttttcattttatctgatgtaaatattgacaaaaatcacttttatgttagtctatgacacttgtaatctattttataaacctaactattatataacatta 23626464  T
Q  183 acatgcacattgttggttccttc 205  Q
    |  ||||||||||||||||||||    
T  23626463 atctgcacattgttggttccttc 23626441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 23626732 - 23626666
Alignment:
Q  8 gaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 74  Q
    |||||||||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  23626732 gaagaaggtgataagctcatctttgatctcgaaaagtcaccgaagaacttgcacgttcgagttgttc 23626666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 12250585 - 12250520
Alignment:
Q  5 atggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagtt 70  Q
    ||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||    
T  12250585 atggaagaaggtggtaagctcatctttgatctcgaaaagtcactgaagaacttgcacgttcgagtt 12250520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 19247704 - 19247785
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||| | |||||||| || ||||||||||||| |||||||    
T  19247704 tgtgatggaagaaggtggtaagctcatctttgatctcaaaaagtcaccaaagaacttacatgttcgagttgttccaaagtag 19247785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 19320888 - 19320969
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||| | |||||||| || ||||||||||||| |||||||    
T  19320888 tgtgatggaagaaggtggtaagctcatctttgatctcaaaaagtcaccaaagaacttacatgttcgagttgttccaaagtag 19320969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 29433635 - 29433712
Alignment:
Q  5 atggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||||||||| |||||||| ||||||||| ||||||| || |||||||||||||||| |||||||    
T  29433635 atggaagaaggtggtaagctcatctttgatctggaaaagtcaccgaagaatttccacgttcgagttgttccaaagtag 29433712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 39444622 - 39444687
Alignment:
Q  5 atggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagtt 70  Q
    ||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||    
T  39444622 atggaagaaggtggtaagctcatctttgatctcgaaaagtcactgaagaacttgcacgttcgagtt 39444687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 30826044 - 30826124
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||  ||||||||||||  |||||||||||| |||||||    
T  30826044 gtgatggaagaaggtggtaagctcatctttgatctcaaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 30826124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 33424652 - 33424572
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  33424652 gtgatggaagaaagtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 33424572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 122 - 209
Target Start/End: Original strand, 38993490 - 38993577
Alignment:
Q  122 tttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaacatgcacattgttggttccttcattg 209  Q
    ||||| |||||||||||  ||||||| ||||||||||||| ||||||||||||||| |||||  |||| |||||||||||||||||||    
T  38993490 tttttagttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgttaatctgcatattgttggttccttcattg 38993577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 122 - 209
Target Start/End: Original strand, 44599509 - 44599596
Alignment:
Q  122 tttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaacatgcacattgttggttccttcattg 209  Q
    ||||| |||||||||||  ||||||| ||||||||||||| ||||||||||||||| |||||  |||| |||||||||||||||||||    
T  44599509 tttttagttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgttaatctgcatattgttggttccttcattg 44599596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 41628486 - 41628564
Alignment:
Q  4 gatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||||||||||  |||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  41628486 gatggaagaaggtggtaagctcatccttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 41628564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 22333515 - 22333435
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||| |||||||||| ||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  22333515 gtgatggaaaaaggtggtaaactcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 22333435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 22947168 - 22947116
Alignment:
Q  30 ttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  22947168 ttgatctcgaaaagtcaccgaagaacttgcacgttcgagttgttcaaaagtag 22947116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 45293972 - 45293891
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||| |||||| ||||||||||||| |||||||| |||||||||   ||||||||||| ||||||||||||| |||||||    
T  45293972 tgtgatagaagaaagtggtaagctcatctttgatcttgaaaagtcactaaagaacttgcatgttcgagttgttccaaagtag 45293891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 42811330 - 42811250
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||| ||||| |||||| |||||||||||  ||||||||||||  || ||||||||| |||||||    
T  42811330 gtgatggaagaaggtggtaaactcatctttgatatcgaaaagtcacagaagaacttgcaaatttgagttgttccaaagtag 42811250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 6477886 - 6477828
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgca 60  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||  ||||||||||||    
T  6477886 gtgatggaaaaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgca 6477828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 38961768 - 38961848
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||| | ||||| ||||||||||||||||||   ||| |||||||  |||||||||||| |||||||    
T  38961768 gtgatggaagaaggtggtgatctcatctttgatctcgaaaagtcacataagtacttgcaaattcgagttgttccaaagtag 38961848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 38992112 - 38992192
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||| | ||||| ||||||||||||||||||   ||| |||||||  |||||||||||| |||||||    
T  38992112 gtgatggaagaaggtggtgatctcatctttgatctcgaaaagtcacataagtacttgcaaattcgagttgttccaaagtag 38992192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 83 - 205
Target Start/End: Complemental strand, 53199 - 53077
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||| ||||||||||||||||| |||||||| ||||| ||||||||||| |||||| ||||||||||||||| ||||||||||||||| ||||    
T  53199 cttttcattttatctgatgtaaatattggcaaaaattctttttttgttagtctatgacacttgtagtctcttttataaacctaactattatgtaacgtta 53100  T
Q  183 acatgcacattgttggttccttc 205  Q
    | |||||||||||||||||||||    
T  53099 atatgcacattgttggttccttc 53077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 53348 - 53301
Alignment:
Q  23 ctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagtt 70  Q
    ||||| ||||||||||||||||||  ||||||||||||||||||||||    
T  53348 ctcatctttgatctcgaaaagtcactgaagaacttgcacgttcgagtt 53301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 83 - 213
Target Start/End: Complemental strand, 10841 - 10711
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||||||||||||||||  ||||| ||||||| ||||||||||| |||||| ||||| ||||||||| ||||||||||||||| ||||    
T  10841 cttttcattttgtctgatgtaaatattggcgaaaatccctttttcgttagtctatgacacttgaagtcttttttataaacctaactattatgtaacgtta 10742  T
Q  183 acatgcacattgttggttccttcattgattc 213  Q
    | |||||||||||| ||||||||||||||||    
T  10741 atatgcacattgtttgttccttcattgattc 10711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 10989 - 10936
Alignment:
Q  29 tttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||| |||||||||| ||  |||||||||||| |||||||    
T  10989 tttgatctcgaaaagtcaccgaagaacttacatattcgagttgttccaaagtag 10936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 83; Significance: 3e-39; HSPs: 2)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 83 - 205
Target Start/End: Original strand, 1358 - 1480
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||| ||||||||||||||||| |||||| ||||||| ||||||||||  |||||| ||||||||||||||| ||||||||||||||| ||||    
T  1358 cttttcattttatctgatgtaaatattggcaaaaatcccttttttgttagtctataacacttgtagtctcttttataaacctaactattatgtaacgtta 1457  T
Q  183 acatgcacattgttggttccttc 205  Q
    | |||||||||||||||||||||    
T  1458 atatgcacattgttggttccttc 1480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 1191 - 1256
Alignment:
Q  5 atggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagtt 70  Q
    ||||||||||||||||| ||||| ||||||||||||||||||  ||||||||||||||||||||||    
T  1191 atggaagaaggtggtaaactcatctttgatctcgaaaagtcactgaagaacttgcacgttcgagtt 1256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 83; Significance: 3e-39; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 26591 - 26465
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  26591 cttttcattttgtctgatgtaagtattggcaaaaattcctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 26492  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  || |||||||||||| ||||||||    
T  26491 atctgtacattgttggtttcttcattg 26465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 26766 - 26686
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||| |||||||||||||||||| ||||||||| ||||||||  |||||||||||| ||||||||||||| |||||||    
T  26766 gtgatgggagaaggtggtaagctcatctttgatctcaaaaagtcacagaagaacttgcaagttcgagttgttccaaagtag 26686  T

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Target: scaffold0006 (Bit Score: 83; Significance: 3e-39; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 152386 - 152260
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||| |||||| | ||||||||||||||||| |||||||||||||||||||||| || |||||||| ||| ||||    
T  152386 cttttcattttgtctgatgtaaatattggcaaaaatccatttttggttagtctatgacacttgcagtctcttttataaacctgactattatataacgtta 152287  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  ||||||||||||||| ||||||||    
T  152286 atctgcacattgttggttgcttcattg 152260  T

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Target: scaffold0006; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 64865 - 64739
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||||||||||||||||||||  |||||| |||||||||||||| ||||  |||| || ||||||||||||| ||||||||||||||| ||||    
T  64865 cttttcattttgtctgatgtaaatattgaaaaaaatccctttttggttagtatatgaaacttacaatctcttttataaacctaactattatgtaacgtta 64766  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  |||||||||||||||| |||||||    
T  64765 atctgcacattgttggttctttcattg 64739  T

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Target: scaffold0006; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 65041 - 64971
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttg 71  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  65041 tgtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcatcgaagaacttgcacgtttgagttg 64971  T

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Target: scaffold0006; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 152562 - 152489
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 74  Q
    ||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||| |||||    
T  152562 tgtgatggaagaaggtggtaaactcatctttgatctcgaaaagttatcgaagaacttgcacgttcgagctgttc 152489  T

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Target: scaffold0005 (Bit Score: 83; Significance: 3e-39; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 9952 - 10078
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  9952 cttttcattttgtctgatgtaagtattggcaaaaattcctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 10051  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  || |||||||||||| ||||||||    
T  10052 atctgtacattgttggtttcttcattg 10078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 9777 - 9857
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||| |||||||||||||||||| ||||||||| ||||||||  |||||||||||| ||||||||||||| |||||||    
T  9777 gtgatgggagaaggtggtaagctcatctttgatctcaaaaagtcacagaagaacttgcaagttcgagttgttccaaagtag 9857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 79; Significance: 7e-37; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 442 - 568
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||  || |||  ||||||||||||| ||||||||||||||| ||||    
T  442 cttttcattttgtctgatgtaagtattggcaaaaattcctttttggttagtctatgaaacctgcgatctcttttataaacctaactattatgtaacgtta 541  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  || |||||||||||||||||||||    
T  542 atctgtacattgttggttccttcattg 568  T

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Target: scaffold0122; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 267 - 347
Alignment:
Q  2 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    |||||||||||||||||||||||||| ||||||||||||||||||   ||||||||| |  |||||||||||  |||||||    
T  267 gtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacataagaacttgaaaattcgagttgtttcaaagtag 347  T

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Target: scaffold0045 (Bit Score: 79; Significance: 7e-37; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 83 - 209
Target Start/End: Complemental strand, 13162 - 13036
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||||||| ||||||||||||||||| |||||| | ||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||| ||||    
T  13162 cttttcattttttctgatgtaaatattggcaaaaatccttttttggttagtctatgacacttgcagtcttttttataaacctaactattatgtaacgtta 13063  T
Q  183 acatgcacattgttggttccttcattg 209  Q
    |  |||| || ||||||||||||||||    
T  13062 atctgcaaatagttggttccttcattg 13036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 13338 - 13257
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||  |||||||||||| ||||||||||||| |||||||    
T  13338 tgtgatggaagaaggtggtaagctcatctttaatctcgaaaagtcactgaagaacttgcatgttcgagttgttccaaagtag 13257  T

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Target: scaffold0171 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 83 - 208
Target Start/End: Complemental strand, 30228 - 30103
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    ||||||| ||||||||||||||||||||| ||||||   ||||||||||||||||| |||||||||| | | ||||||| ||||||||||||||| ||||    
T  30228 cttttcaatttgtctgatgtaaatattggcaaaaatctttttttggttagtctatgacacttgcagtttttcttataaacctaactattatgtaacgtta 30129  T
Q  183 acatgcacattgttggttccttcatt 208  Q
    |  |||||||||||| ||||||||||    
T  30128 atctgcacattgttgattccttcatt 30103  T

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Target: scaffold0171; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 30404 - 30323
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||| ||||||||| |||||||| ||||||||| | ||||||||||| ||| ||||||||| |||||||    
T  30404 tgtgatggaagaaggtgataagctcatctttgatcttgaaaagtcaccaaagaacttgcatgtttgagttgttccaaagtag 30323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 119888 - 119968
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagta 81  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||| ||||||    
T  119888 tgtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcaccgaagaacttgcacattcgagttgttccaaagta 119968  T

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Target: scaffold0236 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 213
Target Start/End: Original strand, 26509 - 26639
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 182  Q
    |||||||||||||||| |||||||||||| |||||| |||||||||||||||| ||  ||||| | | ||||||||||| |||| |||||||||  ||||    
T  26509 cttttcattttgtctggtgtaaatattggcaaaaatccctttttggttagtctttgaaacttgtaatatcttttataaacctaagtattatgtagcgtta 26608  T
Q  183 acatgcacattgttggttccttcattgattc 213  Q
    |  |||||||||||| ||| |||||||||||    
T  26609 atctgcacattgttgattctttcattgattc 26639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 4586 - 4505
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||| ||||||||||||| |||||||    
T  4586 tgtgatggaagaaggtggtaagctcatctttgatttcgaaaagtcaccgaagaacttgcatgttcgagttgttccaaagtag 4505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 4410 - 4308
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcag--tctcttttataaatctaactattatgtaatgt 180  Q
    ||||||||||| |||||||||| |||| | ||||   ||||||||||||||||||| |||||||||  | | ||||||||| ||||||||||||||| ||    
T  4410 cttttcattttatctgatgtaagtattagcaaaatcacctttttggttagtctatgacacttgcagttttttttttataaacctaactattatgtaacgt 4311  T
Q  181 taa 183  Q
    |||    
T  4310 taa 4308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 29424 - 29343
Alignment:
Q  1 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 82  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||  ||||||||||||||| |||||||    
T  29424 tgtgatggaagaaggtgataagctcatctttgatctcgaaaagtcaccgaagaacttatacgttcgagttgttccaaagtag 29343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1891 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold1891
Description:

Target: scaffold1891; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 157
Target Start/End: Original strand, 41 - 115
Alignment:
Q  83 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctctttta 157  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||  ||||||| |||||||||    
T  41 cttttcattttgtctgatgtaagtattggcaaaaattcctttttggttagtctatgaaacttgcaatctctttta 115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 122 - 209
Target Start/End: Complemental strand, 49427 - 49340
Alignment:
Q  122 tttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaacatgcacattgttggttccttcattg 209  Q
    ||||| |||||||||||  ||||||| ||||||||||||| | ||||||||||||| |||||  ||||||||||||||||||||||||    
T  49427 tttttagttagtctatgaaacttgcaatctcttttataaaccgaactattatgtaacgttaatctgcacattgttggttccttcattg 49340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 209
Target Start/End: Complemental strand, 3646 - 3559
Alignment:
Q  122 tttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaacatgcacattgttggttccttcattg 209  Q
    ||||| |||||||||||  ||||||| ||||||||||||| | ||||||||||||| |||||  ||||||||||||||| ||||||||    
T  3646 tttttagttagtctatgaaacttgcaatctcttttataaaccaaactattatgtaacgttaatctgcacattgttggtttcttcattg 3559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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