View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0755_low_59 (Length: 347)

Name: NF0755_low_59
Description: NF0755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0755_low_59
NF0755_low_59
[»] chr5 (62 HSPs)
chr5 (7-347)||(9078066-9078406)
chr5 (1-347)||(1096581-1096927)
chr5 (1-347)||(24529334-24529681)
chr5 (1-339)||(21985808-21986146)
chr5 (1-324)||(25421669-25421992)
chr5 (1-324)||(25431531-25431854)
chr5 (1-324)||(24493705-24494028)
chr5 (1-310)||(13095645-13095954)
chr5 (1-324)||(23390157-23390480)
chr5 (1-310)||(13025461-13025770)
chr5 (1-324)||(8286514-8286826)
chr5 (1-323)||(22075157-22075468)
chr5 (1-324)||(21292642-21292953)
chr5 (3-325)||(22107047-22107358)
chr5 (1-225)||(11580906-11581130)
chr5 (1-225)||(36154489-36154713)
chr5 (1-146)||(22119854-22119998)
chr5 (1-146)||(19660498-19660643)
chr5 (1-146)||(24766998-24767142)
chr5 (3-328)||(22144182-22144508)
chr5 (1-142)||(21565863-21566004)
chr5 (1-146)||(22959194-22959339)
chr5 (1-231)||(21871232-21871463)
chr5 (1-231)||(21875512-21875743)
chr5 (1-141)||(19669219-19669360)
chr5 (1-171)||(21329156-21329326)
chr5 (2-171)||(5888837-5889006)
chr5 (1-72)||(21498678-21498749)
chr5 (246-297)||(22412337-22412388)
chr5 (3-69)||(20026526-20026592)
chr5 (277-347)||(37724015-37724086)
chr5 (4-73)||(22177807-22177876)
chr5 (6-70)||(41294112-41294176)
chr5 (246-324)||(18418714-18418793)
chr5 (12-71)||(21294947-21295006)
chr5 (1-72)||(21741204-21741275)
chr5 (12-70)||(15441638-15441696)
chr5 (12-70)||(25406789-25406847)
chr5 (13-71)||(25535351-25535409)
chr5 (3-45)||(26732421-26732463)
chr5 (3-45)||(26740234-26740276)
chr5 (1-70)||(17284430-17284499)
chr5 (105-154)||(21501919-21501968)
chr5 (12-69)||(22588459-22588516)
chr5 (13-70)||(23336973-23337030)
chr5 (3-44)||(25574056-25574097)
chr5 (3-44)||(25575249-25575290)
chr5 (3-44)||(25576442-25576483)
chr5 (3-72)||(26011697-26011766)
chr5 (94-146)||(123062-123114)
chr5 (94-146)||(19472476-19472528)
chr5 (12-56)||(19992261-19992305)
chr5 (107-147)||(20026706-20026746)
chr5 (246-297)||(20766035-20766087)
chr5 (315-347)||(20766095-20766127)
chr5 (94-146)||(20805858-20805910)
chr5 (179-231)||(22120033-22120085)
chr5 (12-56)||(22334501-22334545)
chr5 (315-347)||(22412297-22412329)
chr5 (94-146)||(23201680-23201732)
chr5 (94-146)||(23535346-23535398)
chr5 (94-146)||(31342414-31342466)
[»] chr6 (65 HSPs)
chr6 (1-347)||(19303202-19303548)
chr6 (1-347)||(20593887-20594233)
chr6 (1-347)||(29060654-29061000)
chr6 (1-347)||(18409488-18409834)
chr6 (1-347)||(25629016-25629362)
chr6 (1-324)||(20637955-20638267)
chr6 (1-324)||(20360632-20360944)
chr6 (1-308)||(22779888-22780195)
chr6 (1-324)||(17287457-17287780)
chr6 (1-147)||(28496134-28496280)
chr6 (1-324)||(16920305-16920616)
chr6 (1-252)||(18821491-18821731)
chr6 (1-147)||(29808544-29808691)
chr6 (1-324)||(22831640-22831951)
chr6 (1-221)||(18456955-18457174)
chr6 (1-347)||(25611384-25611730)
chr6 (12-347)||(25603057-25603392)
chr6 (1-142)||(1561622-1561763)
chr6 (1-146)||(21939699-21939843)
chr6 (1-146)||(4667874-4668019)
chr6 (1-144)||(19652512-19652655)
chr6 (1-146)||(4185484-4185629)
chr6 (1-183)||(11185780-11185951)
chr6 (1-146)||(15894091-15894237)
chr6 (1-146)||(4189271-4189416)
chr6 (1-146)||(4674721-4674866)
chr6 (1-145)||(27332945-27333089)
chr6 (1-145)||(27393685-27393829)
chr6 (1-79)||(31155059-31155137)
chr6 (1-328)||(25644454-25644782)
chr6 (1-72)||(23019796-23019867)
chr6 (1-90)||(22334543-22334632)
chr6 (1-146)||(22080398-22080543)
chr6 (210-279)||(5834367-5834436)
chr6 (210-279)||(20177096-20177165)
chr6 (210-279)||(22158826-22158895)
chr6 (197-328)||(8227367-8227499)
chr6 (3-71)||(20109605-20109673)
chr6 (219-281)||(15041430-15041492)
chr6 (13-71)||(31164531-31164589)
chr6 (289-346)||(18821795-18821851)
chr6 (94-146)||(25641939-25641991)
chr6 (12-71)||(22331803-22331862)
chr6 (111-146)||(23990218-23990253)
chr6 (12-70)||(1538628-1538686)
chr6 (12-70)||(1544727-1544785)
chr6 (3-69)||(17106180-17106246)
chr6 (3-73)||(19023837-19023907)
chr6 (294-324)||(20076833-20076863)
chr6 (3-69)||(20224412-20224478)
chr6 (3-69)||(22118396-22118462)
chr6 (2-72)||(25956283-25956353)
chr6 (3-65)||(33443517-33443579)
chr6 (3-69)||(35008618-35008684)
chr6 (94-143)||(15041306-15041355)
chr6 (13-70)||(16372223-16372280)
chr6 (283-347)||(25642126-25642191)
chr6 (12-56)||(14099005-14099049)
chr6 (12-56)||(14472648-14472692)
chr6 (94-146)||(16741503-16741555)
chr6 (94-146)||(16924635-16924687)
chr6 (94-146)||(16929350-16929402)
chr6 (176-224)||(18453419-18453467)
chr6 (94-146)||(18955520-18955572)
chr6 (94-146)||(23657177-23657229)
[»] chr4 (63 HSPs)
chr4 (1-347)||(14038762-14039109)
chr4 (1-347)||(16377183-16377530)
chr4 (3-264)||(15091093-15091355)
chr4 (1-324)||(44052966-44053289)
chr4 (1-324)||(22636572-22636894)
chr4 (1-325)||(12902893-12903205)
chr4 (1-325)||(7089013-7089326)
chr4 (1-324)||(3096781-3097092)
chr4 (1-321)||(16239653-16239951)
chr4 (1-323)||(17047745-17048055)
chr4 (1-324)||(14052974-14053285)
chr4 (1-347)||(44928584-44928931)
chr4 (84-324)||(7893840-7894077)
chr4 (1-183)||(7798975-7799157)
chr4 (105-323)||(23374125-23374342)
chr4 (1-225)||(44102446-44102669)
chr4 (1-144)||(16596963-16597105)
chr4 (1-146)||(15552129-15552273)
chr4 (1-146)||(24029057-24029201)
chr4 (1-146)||(13812470-13812614)
chr4 (3-146)||(22633876-22634018)
chr4 (1-231)||(20156951-20157182)
chr4 (1-220)||(21815293-21815511)
chr4 (3-328)||(52242856-52243182)
chr4 (3-232)||(15464592-15464822)
chr4 (1-110)||(6190783-6190893)
chr4 (1-147)||(21814964-21815109)
chr4 (1-147)||(21818386-21818531)
chr4 (2-146)||(8846689-8846834)
chr4 (1-147)||(12774313-12774458)
chr4 (244-324)||(16270140-16270220)
chr4 (59-146)||(3332201-3332287)
chr4 (1-72)||(39705949-39706020)
chr4 (1-146)||(15099665-15099810)
chr4 (1-69)||(43198249-43198317)
chr4 (140-346)||(6190578-6190782)
chr4 (12-56)||(17046721-17046765)
chr4 (1-72)||(15868296-15868367)
chr4 (1-72)||(15190706-15190777)
chr4 (221-308)||(17046637-17046724)
chr4 (3-72)||(13436-13505)
chr4 (12-71)||(14685534-14685593)
chr4 (1-50)||(13844950-13844999)
chr4 (246-297)||(14280466-14280518)
chr4 (7-71)||(14679325-14679389)
chr4 (246-297)||(54798669-54798721)
chr4 (1-72)||(12287794-12287865)
chr4 (12-71)||(23838796-23838855)
chr4 (1-44)||(32851868-32851911)
chr4 (12-70)||(386038-386096)
chr4 (12-70)||(7900855-7900913)
chr4 (12-70)||(15321778-15321836)
chr4 (3-69)||(17333749-17333815)
chr4 (3-45)||(32306582-32306624)
chr4 (1-71)||(40471837-40471907)
chr4 (12-70)||(51493502-51493560)
chr4 (1-70)||(40478511-40478580)
chr4 (3-72)||(53081760-53081829)
chr4 (315-347)||(8574844-8574876)
chr4 (12-56)||(16956334-16956378)
chr4 (179-231)||(24028970-24029022)
chr4 (3-71)||(46640043-46640111)
chr4 (315-347)||(54798729-54798761)
[»] chr1 (59 HSPs)
chr1 (2-347)||(50209875-50210220)
chr1 (2-347)||(34509894-34510239)
chr1 (1-347)||(22532383-22532729)
chr1 (1-324)||(22354233-22354556)
chr1 (1-324)||(20135324-20135647)
chr1 (1-325)||(27250401-27250714)
chr1 (1-323)||(21026818-21027129)
chr1 (1-324)||(22355846-22356159)
chr1 (1-324)||(22357532-22357845)
chr1 (1-224)||(433244-433467)
chr1 (1-272)||(20846891-20847151)
chr1 (3-324)||(38801065-38801374)
chr1 (1-146)||(20918917-20919061)
chr1 (1-169)||(33681301-33681469)
chr1 (1-147)||(21754350-21754495)
chr1 (1-146)||(20091135-20091281)
chr1 (1-174)||(52927642-52927815)
chr1 (245-323)||(48603652-48603730)
chr1 (4-146)||(20248592-20248734)
chr1 (1-70)||(22921528-22921597)
chr1 (1-81)||(22238009-22238089)
chr1 (170-328)||(16758783-16758942)
chr1 (1-72)||(21162117-21162188)
chr1 (178-323)||(22468535-22468679)
chr1 (1-47)||(21301199-21301245)
chr1 (1-146)||(28194109-28194254)
chr1 (122-347)||(35260861-35261088)
chr1 (106-224)||(26065176-26065295)
chr1 (1-72)||(43697749-43697820)
chr1 (3-73)||(35260718-35260788)
chr1 (6-72)||(35981352-35981418)
chr1 (3-72)||(21895895-21895964)
chr1 (1-73)||(16759114-16759186)
chr1 (277-347)||(21714661-21714732)
chr1 (1-72)||(41049629-41049700)
chr1 (3-69)||(16381632-16381698)
chr1 (14-72)||(26065383-26065441)
chr1 (3-72)||(16367873-16367942)
chr1 (105-170)||(21162056-21162121)
chr1 (3-72)||(21861157-21861226)
chr1 (12-71)||(20524899-20524958)
chr1 (1-72)||(21342537-21342608)
chr1 (1-72)||(21347402-21347473)
chr1 (12-71)||(21438157-21438216)
chr1 (12-71)||(23763574-23763633)
chr1 (12-70)||(19063884-19063942)
chr1 (12-70)||(19111774-19111832)
chr1 (3-69)||(27652808-27652874)
chr1 (3-69)||(48521036-48521102)
chr1 (3-45)||(52940464-52940506)
chr1 (3-72)||(16093479-16093548)
chr1 (105-146)||(20637165-20637206)
chr1 (11-72)||(50687057-50687118)
chr1 (170-222)||(21342332-21342384)
chr1 (170-222)||(21347197-21347249)
chr1 (277-321)||(21787979-21788023)
chr1 (94-146)||(45310123-45310175)
chr1 (1-69)||(50613701-50613769)
chr1 (1-69)||(50621529-50621597)
[»] chr8 (55 HSPs)
chr8 (1-347)||(6759369-6759717)
chr8 (1-347)||(16092002-16092349)
chr8 (1-347)||(28648705-28649051)
chr8 (1-347)||(22875178-22875525)
chr8 (1-324)||(22626872-22627195)
chr8 (1-324)||(18818071-18818393)
chr8 (1-324)||(20536345-20536668)
chr8 (1-324)||(21923589-21923912)
chr8 (1-324)||(18878898-18879220)
chr8 (1-324)||(23648690-23649013)
chr8 (1-324)||(23406518-23406841)
chr8 (1-323)||(25362812-25363123)
chr8 (1-324)||(21918671-21918983)
chr8 (1-304)||(7372927-7373209)
chr8 (1-225)||(41598420-41598644)
chr8 (1-324)||(31971393-31971704)
chr8 (1-324)||(16199319-16199629)
chr8 (1-146)||(5865938-5866082)
chr8 (1-146)||(17141229-17141373)
chr8 (134-324)||(45130793-45130981)
chr8 (1-146)||(21249697-21249841)
chr8 (1-146)||(21255535-21255679)
chr8 (1-146)||(21491308-21491452)
chr8 (1-72)||(45130692-45130763)
chr8 (11-89)||(21674076-21674155)
chr8 (1-146)||(26355359-26355504)
chr8 (1-146)||(39834147-39834292)
chr8 (1-72)||(19801088-19801159)
chr8 (1-72)||(38854912-38854983)
chr8 (1-75)||(6520754-6520828)
chr8 (3-73)||(20499048-20499118)
chr8 (1-69)||(21414888-21414956)
chr8 (3-73)||(37116812-37116882)
chr8 (11-72)||(23760511-23760572)
chr8 (3-71)||(17266579-17266647)
chr8 (3-73)||(982989-983059)
chr8 (11-72)||(24353489-24353550)
chr8 (240-324)||(21389353-21389436)
chr8 (3-71)||(40492438-40492506)
chr8 (1-44)||(13507670-13507713)
chr8 (1-44)||(13597202-13597245)
chr8 (12-71)||(20527812-20527871)
chr8 (245-324)||(21395888-21395966)
chr8 (245-324)||(21790381-21790459)
chr8 (11-45)||(17085770-17085804)
chr8 (12-70)||(18865695-18865753)
chr8 (170-224)||(22963249-22963303)
chr8 (3-69)||(22996313-22996379)
chr8 (3-72)||(2418462-2418531)
chr8 (1-70)||(16882845-16882914)
chr8 (3-72)||(17439092-17439161)
chr8 (94-146)||(22010435-22010487)
chr8 (315-347)||(26219826-26219858)
chr8 (246-297)||(26222987-26223039)
chr8 (315-347)||(26225268-26225300)
[»] chr3 (75 HSPs)
chr3 (1-347)||(14972968-14973314)
chr3 (3-347)||(40213384-40213728)
chr3 (1-347)||(11424424-11424770)
chr3 (1-338)||(18438657-18438994)
chr3 (1-347)||(25476046-25476392)
chr3 (1-324)||(14576494-14576817)
chr3 (1-308)||(14572741-14573048)
chr3 (1-324)||(26687024-26687347)
chr3 (1-324)||(17487993-17488317)
chr3 (10-324)||(13442411-13442725)
chr3 (1-324)||(17499475-17499799)
chr3 (1-324)||(20698108-20698419)
chr3 (1-320)||(23083022-23083341)
chr3 (63-324)||(43841069-43841330)
chr3 (1-222)||(17247947-17248168)
chr3 (1-347)||(42386524-42386871)
chr3 (1-324)||(30029976-30030288)
chr3 (1-225)||(53070360-53070583)
chr3 (1-323)||(12399347-12399655)
chr3 (132-323)||(16796685-16796875)
chr3 (1-146)||(12340068-12340212)
chr3 (3-146)||(12852027-12852169)
chr3 (1-142)||(9513228-9513370)
chr3 (1-142)||(9521203-9521345)
chr3 (13-146)||(14665921-14666053)
chr3 (13-146)||(14669076-14669208)
chr3 (13-146)||(14735434-14735566)
chr3 (1-146)||(13209989-13210133)
chr3 (1-147)||(12933971-12934117)
chr3 (1-90)||(14179693-14179782)
chr3 (1-147)||(32307983-32308128)
chr3 (1-116)||(4588476-4588590)
chr3 (1-146)||(16097645-16097790)
chr3 (1-147)||(1644344-1644489)
chr3 (1-143)||(49389305-49389446)
chr3 (1-147)||(49667745-49667890)
chr3 (245-323)||(14179570-14179648)
chr3 (1-328)||(2050862-2051187)
chr3 (1-67)||(43842572-43842638)
chr3 (246-324)||(24153115-24153193)
chr3 (3-147)||(324549-324693)
chr3 (3-328)||(52523390-52523715)
chr3 (1-72)||(16104169-16104240)
chr3 (1-59)||(17247181-17247239)
chr3 (1-143)||(14234809-14234950)
chr3 (1-50)||(12171778-12171827)
chr3 (1-136)||(16809724-16809845)
chr3 (1-72)||(1465070-1465141)
chr3 (1-72)||(15471313-15471384)
chr3 (3-72)||(22109938-22110007)
chr3 (1-69)||(23275133-23275201)
chr3 (1-72)||(14501588-14501659)
chr3 (3-44)||(43927597-43927638)
chr3 (3-72)||(45797632-45797701)
chr3 (1-72)||(605952-606023)
chr3 (12-71)||(839609-839668)
chr3 (1-72)||(12378385-12378456)
chr3 (1-72)||(23412834-23412905)
chr3 (12-71)||(24188140-24188199)
chr3 (12-71)||(55149341-55149400)
chr3 (3-45)||(316612-316654)
chr3 (3-69)||(9578070-9578136)
chr3 (3-69)||(21837892-21837958)
chr3 (1-70)||(15691950-15692019)
chr3 (11-68)||(23318333-23318390)
chr3 (1-70)||(23704441-23704510)
chr3 (1-70)||(23722897-23722966)
chr3 (1-70)||(23741353-23741422)
chr3 (3-72)||(37250775-37250844)
chr3 (1-70)||(41201470-41201539)
chr3 (12-56)||(4291150-4291194)
chr3 (12-56)||(17710275-17710319)
chr3 (315-347)||(21618558-21618590)
chr3 (315-347)||(36166707-36166739)
chr3 (12-56)||(41092030-41092074)
[»] scaffold0217 (1 HSPs)
scaffold0217 (1-346)||(16260-16606)
[»] scaffold0228 (3 HSPs)
scaffold0228 (1-347)||(4621-4968)
scaffold0228 (1-347)||(12203-12550)
scaffold0228 (1-347)||(22155-22502)
[»] scaffold0056 (3 HSPs)
scaffold0056 (1-347)||(16876-17222)
scaffold0056 (1-72)||(79023-79094)
scaffold0056 (122-225)||(79111-79214)
[»] scaffold0122 (3 HSPs)
scaffold0122 (1-344)||(25726-26069)
scaffold0122 (1-336)||(33155-33491)
scaffold0122 (315-347)||(44682-44714)
[»] chr7 (62 HSPs)
chr7 (2-347)||(3564026-3564371)
chr7 (1-306)||(38227635-38227940)
chr7 (1-324)||(9509326-9509649)
chr7 (1-347)||(15143698-15144045)
chr7 (1-324)||(12698969-12699292)
chr7 (1-323)||(16385919-16386230)
chr7 (1-324)||(40443527-40443837)
chr7 (1-323)||(26212134-26212445)
chr7 (1-324)||(27847505-27847816)
chr7 (1-225)||(44116741-44116964)
chr7 (1-225)||(17061621-17061845)
chr7 (112-308)||(10589191-10589386)
chr7 (1-146)||(28504962-28505106)
chr7 (1-225)||(12756378-12756601)
chr7 (1-142)||(15754548-15754689)
chr7 (1-146)||(18302494-18302638)
chr7 (1-142)||(39267307-39267447)
chr7 (1-231)||(9751211-9751442)
chr7 (1-146)||(34201099-34201243)
chr7 (1-146)||(2831967-2832110)
chr7 (3-347)||(2279781-2280126)
chr7 (3-226)||(12255454-12255677)
chr7 (1-147)||(810790-810936)
chr7 (2-146)||(44014489-44014633)
chr7 (246-324)||(18456319-18456397)
chr7 (1-174)||(22073203-22073376)
chr7 (11-174)||(16056615-16056778)
chr7 (1-68)||(47832201-47832268)
chr7 (1-171)||(68036-68206)
chr7 (1-50)||(11995719-11995768)
chr7 (172-347)||(19649317-19649492)
chr7 (1-147)||(16219377-16219523)
chr7 (11-72)||(16324395-16324456)
chr7 (1-50)||(18006052-18006101)
chr7 (1-73)||(2529638-2529710)
chr7 (4-72)||(14045213-14045281)
chr7 (4-72)||(14355243-14355311)
chr7 (1-69)||(21064823-21064891)
chr7 (1-72)||(9389356-9389427)
chr7 (3-69)||(9177252-9177318)
chr7 (14-72)||(12901794-12901852)
chr7 (122-328)||(15008279-15008487)
chr7 (4-72)||(1867650-1867718)
chr7 (74-146)||(11995764-11995835)
chr7 (246-297)||(48273542-48273594)
chr7 (4-71)||(14036664-14036731)
chr7 (4-71)||(14346694-14346761)
chr7 (12-71)||(14953560-14953619)
chr7 (12-71)||(14959526-14959585)
chr7 (12-71)||(26420340-26420399)
chr7 (12-71)||(44408043-44408102)
chr7 (3-45)||(11768526-11768568)
chr7 (3-69)||(17017054-17017120)
chr7 (170-224)||(17017297-17017351)
chr7 (277-346)||(24054581-24054651)
chr7 (14-71)||(11547953-11548010)
chr7 (14-71)||(11554549-11554606)
chr7 (3-44)||(15008107-15008148)
chr7 (283-347)||(18154779-18154844)
chr7 (1-70)||(20702664-20702733)
chr7 (1-70)||(32768038-32768107)
chr7 (12-56)||(11238655-11238699)
[»] scaffold0145 (2 HSPs)
scaffold0145 (1-324)||(38897-39219)
scaffold0145 (244-324)||(33078-33158)
[»] chr2 (34 HSPs)
chr2 (1-347)||(23660136-23660482)
chr2 (1-347)||(22337229-22337575)
chr2 (1-324)||(23076579-23076900)
chr2 (1-324)||(22737841-22738164)
chr2 (1-324)||(22730894-22731218)
chr2 (1-306)||(27753730-27754035)
chr2 (1-323)||(298476-298797)
chr2 (1-324)||(23285998-23286310)
chr2 (1-346)||(32451590-32451934)
chr2 (1-324)||(37788-38099)
chr2 (1-323)||(23654071-23654369)
chr2 (1-324)||(20309243-20309554)
chr2 (1-146)||(23071624-23071768)
chr2 (156-324)||(23060650-23060815)
chr2 (1-145)||(22133878-22134020)
chr2 (3-328)||(23708282-23708607)
chr2 (4-143)||(28406297-28406436)
chr2 (1-65)||(28291963-28292027)
chr2 (1-72)||(25176231-25176302)
chr2 (3-71)||(23207744-23207812)
chr2 (170-328)||(19671962-19672118)
chr2 (3-49)||(39827602-39827648)
chr2 (3-72)||(22412722-22412791)
chr2 (283-347)||(22758658-22758723)
chr2 (94-146)||(22740716-22740768)
chr2 (14-69)||(20519790-20519845)
chr2 (12-71)||(24503473-24503532)
chr2 (12-70)||(12829434-12829492)
chr2 (3-73)||(18786471-18786541)
chr2 (3-69)||(23005197-23005263)
chr2 (3-45)||(34137412-34137454)
chr2 (283-347)||(22740903-22740968)
chr2 (12-56)||(23171416-23171460)
chr2 (12-56)||(23582673-23582717)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-347)||(339612-339957)
[»] scaffold0011 (2 HSPs)
scaffold0011 (1-324)||(52050-52372)
scaffold0011 (1-325)||(167651-167963)
[»] scaffold0130 (3 HSPs)
scaffold0130 (68-347)||(27944-28223)
scaffold0130 (1-72)||(28925-28996)
scaffold0130 (5-73)||(1368-1436)
[»] scaffold0141 (1 HSPs)
scaffold0141 (89-347)||(39590-39848)
[»] scaffold0049 (1 HSPs)
scaffold0049 (89-347)||(74964-75222)
[»] scaffold0292 (2 HSPs)
scaffold0292 (1-324)||(479-802)
scaffold0292 (3-324)||(3607-3928)
[»] scaffold0175 (2 HSPs)
scaffold0175 (1-324)||(13229-13552)
scaffold0175 (1-145)||(34437-34580)
[»] scaffold0080 (1 HSPs)
scaffold0080 (1-324)||(40049-40371)
[»] scaffold0021 (5 HSPs)
scaffold0021 (1-324)||(124722-125042)
scaffold0021 (1-89)||(62932-63021)
scaffold0021 (277-347)||(174878-174949)
scaffold0021 (14-72)||(135965-136023)
scaffold0021 (14-72)||(144673-144731)
[»] scaffold0121 (1 HSPs)
scaffold0121 (6-324)||(8198-8517)
[»] scaffold0231 (1 HSPs)
scaffold0231 (1-324)||(23019-23342)
[»] scaffold0026 (5 HSPs)
scaffold0026 (4-347)||(39971-40313)
scaffold0026 (143-347)||(26009-26213)
scaffold0026 (16-146)||(59179-59308)
scaffold0026 (24-131)||(26555-26662)
scaffold0026 (1-78)||(39592-39669)
[»] scaffold0016 (4 HSPs)
scaffold0016 (1-324)||(1988-2311)
scaffold0016 (1-146)||(207180-207324)
scaffold0016 (3-69)||(119214-119280)
scaffold0016 (179-231)||(207359-207411)
[»] scaffold0042 (1 HSPs)
scaffold0042 (1-324)||(23963-24286)
[»] scaffold0647 (1 HSPs)
scaffold0647 (1-324)||(5782-6105)
[»] scaffold0193 (1 HSPs)
scaffold0193 (1-324)||(13348-13660)
[»] scaffold0084 (1 HSPs)
scaffold0084 (1-301)||(10323-10618)
[»] scaffold0639 (1 HSPs)
scaffold0639 (1-324)||(8616-8935)
[»] scaffold0395 (2 HSPs)
scaffold0395 (1-345)||(623-968)
scaffold0395 (1-69)||(8153-8221)
[»] scaffold0305 (1 HSPs)
scaffold0305 (1-269)||(20595-20863)
[»] scaffold1842 (1 HSPs)
scaffold1842 (1-325)||(721-1033)
[»] scaffold0627 (1 HSPs)
scaffold0627 (1-202)||(163-364)
[»] scaffold0070 (1 HSPs)
scaffold0070 (1-347)||(4638-4983)
[»] scaffold0427 (1 HSPs)
scaffold0427 (1-324)||(13633-13944)
[»] scaffold0484 (1 HSPs)
scaffold0484 (1-323)||(1052-1363)
[»] scaffold0034 (2 HSPs)
scaffold0034 (1-346)||(51545-51889)
scaffold0034 (3-171)||(32826-32994)
[»] scaffold0456 (1 HSPs)
scaffold0456 (1-324)||(10098-10409)
[»] scaffold0165 (3 HSPs)
scaffold0165 (1-302)||(3640-3930)
scaffold0165 (1-302)||(7704-7994)
scaffold0165 (3-72)||(27305-27374)
[»] scaffold0120 (4 HSPs)
scaffold0120 (1-320)||(32620-32938)
scaffold0120 (1-320)||(46067-46385)
scaffold0120 (9-225)||(16323-16539)
scaffold0120 (250-346)||(16228-16323)
[»] scaffold0598 (1 HSPs)
scaffold0598 (1-324)||(724-1035)
[»] scaffold0114 (1 HSPs)
scaffold0114 (4-324)||(15140-15448)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-324)||(32202-32513)
[»] scaffold0088 (1 HSPs)
scaffold0088 (1-322)||(21050-21350)
[»] scaffold0309 (1 HSPs)
scaffold0309 (1-325)||(6746-7059)
[»] scaffold0540 (2 HSPs)
scaffold0540 (1-164)||(674-837)
scaffold0540 (176-347)||(2987-3158)
[»] scaffold0403 (1 HSPs)
scaffold0403 (1-323)||(4987-5297)
[»] scaffold0358 (2 HSPs)
scaffold0358 (1-308)||(88-385)
scaffold0358 (1-308)||(4864-5161)
[»] scaffold0235 (2 HSPs)
scaffold0235 (1-272)||(11185-11445)
scaffold0235 (1-72)||(14028-14099)
[»] scaffold0839 (1 HSPs)
scaffold0839 (1-210)||(1739-1947)
[»] scaffold0100 (1 HSPs)
scaffold0100 (1-147)||(20426-20572)
[»] scaffold0490 (1 HSPs)
scaffold0490 (1-325)||(2088-2401)
[»] scaffold0351 (1 HSPs)
scaffold0351 (1-324)||(16417-16728)
[»] scaffold0352 (1 HSPs)
scaffold0352 (1-281)||(17669-17928)
[»] scaffold0032 (1 HSPs)
scaffold0032 (1-308)||(51732-52028)
[»] scaffold0161 (1 HSPs)
scaffold0161 (1-146)||(2106-2250)
[»] scaffold0413 (2 HSPs)
scaffold0413 (1-225)||(15276-15500)
scaffold0413 (3-73)||(13032-13102)
[»] scaffold0142 (2 HSPs)
scaffold0142 (1-217)||(17024-17240)
scaffold0142 (40-146)||(7471-7576)
[»] scaffold0718 (1 HSPs)
scaffold0718 (1-308)||(4803-5099)
[»] scaffold0261 (2 HSPs)
scaffold0261 (1-146)||(15974-16118)
scaffold0261 (277-346)||(1452-1522)
[»] scaffold0503 (1 HSPs)
scaffold0503 (1-225)||(12165-12388)
[»] scaffold0218 (1 HSPs)
scaffold0218 (1-142)||(28941-29081)
[»] scaffold0064 (1 HSPs)
scaffold0064 (1-322)||(47132-47435)
[»] scaffold0221 (1 HSPs)
scaffold0221 (1-143)||(12470-12611)
[»] scaffold0106 (2 HSPs)
scaffold0106 (3-324)||(1424-1733)
scaffold0106 (3-324)||(7401-7710)
[»] scaffold0327 (1 HSPs)
scaffold0327 (235-347)||(3424-3537)
[»] scaffold0075 (2 HSPs)
scaffold0075 (1-146)||(7955-8099)
scaffold0075 (3-72)||(53134-53203)
[»] scaffold0192 (1 HSPs)
scaffold0192 (1-146)||(10226-10370)
[»] scaffold0166 (1 HSPs)
scaffold0166 (1-146)||(9495-9639)
[»] scaffold0124 (1 HSPs)
scaffold0124 (1-146)||(24312-24456)
[»] scaffold0037 (1 HSPs)
scaffold0037 (13-146)||(80005-80137)
[»] scaffold0031 (2 HSPs)
scaffold0031 (1-225)||(20087-20310)
scaffold0031 (277-346)||(65730-65800)
[»] scaffold0028 (2 HSPs)
scaffold0028 (1-147)||(132967-133113)
scaffold0028 (12-70)||(57408-57466)
[»] scaffold0347 (1 HSPs)
scaffold0347 (13-146)||(344-476)
[»] scaffold0211 (1 HSPs)
scaffold0211 (1-147)||(28470-28616)
[»] scaffold0150 (1 HSPs)
scaffold0150 (1-147)||(32397-32543)
[»] scaffold0266 (1 HSPs)
scaffold0266 (1-93)||(18619-18712)
[»] scaffold0908 (1 HSPs)
scaffold0908 (257-347)||(3103-3193)
[»] scaffold0628 (1 HSPs)
scaffold0628 (1-147)||(2464-2609)
[»] scaffold1984 (1 HSPs)
scaffold1984 (11-154)||(437-580)
[»] scaffold0556 (2 HSPs)
scaffold0556 (1-146)||(7126-7271)
scaffold0556 (1-72)||(8405-8476)
[»] scaffold0475 (1 HSPs)
scaffold0475 (1-146)||(9391-9536)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-147)||(101709-101854)
[»] scaffold0876 (1 HSPs)
scaffold0876 (1-80)||(2746-2825)
[»] scaffold0125 (1 HSPs)
scaffold0125 (1-146)||(45450-45596)
[»] scaffold0102 (1 HSPs)
scaffold0102 (1-154)||(19573-19726)
[»] scaffold1137 (1 HSPs)
scaffold1137 (1-147)||(1962-2108)
[»] scaffold0389 (1 HSPs)
scaffold0389 (1-75)||(13269-13343)
[»] scaffold0357 (4 HSPs)
scaffold0357 (108-328)||(15866-16088)
scaffold0357 (157-328)||(13262-13435)
scaffold0357 (3-72)||(13596-13665)
scaffold0357 (1-69)||(3162-3230)
[»] scaffold0001 (3 HSPs)
scaffold0001 (1-89)||(161056-161145)
scaffold0001 (3-45)||(446965-447007)
scaffold0001 (3-45)||(497896-497938)
[»] scaffold0247 (2 HSPs)
scaffold0247 (1-69)||(6489-6557)
scaffold0247 (106-170)||(6561-6625)
[»] scaffold0151 (1 HSPs)
scaffold0151 (1-65)||(10540-10604)
[»] scaffold0810 (1 HSPs)
scaffold0810 (1-72)||(3321-3392)
[»] scaffold0138 (3 HSPs)
scaffold0138 (1-174)||(13227-13400)
scaffold0138 (13-71)||(29892-29950)
scaffold0138 (13-71)||(41888-41946)
[»] scaffold0116 (2 HSPs)
scaffold0116 (1-146)||(43445-43590)
scaffold0116 (1-146)||(47365-47510)
[»] scaffold0207 (1 HSPs)
scaffold0207 (1-72)||(2305-2376)
[»] scaffold0078 (1 HSPs)
scaffold0078 (2-147)||(10842-10987)
[»] scaffold0010 (4 HSPs)
scaffold0010 (1-146)||(130222-130367)
scaffold0010 (106-328)||(60479-60703)
scaffold0010 (3-69)||(60301-60367)
scaffold0010 (12-56)||(242435-242479)
[»] scaffold0530 (1 HSPs)
scaffold0530 (2-67)||(690-755)
[»] scaffold0278 (1 HSPs)
scaffold0278 (1-69)||(5985-6053)
[»] scaffold0507 (1 HSPs)
scaffold0507 (1-147)||(7718-7864)
[»] scaffold0555 (2 HSPs)
scaffold0555 (1-142)||(897-1039)
scaffold0555 (1-61)||(10229-10289)
[»] scaffold0320 (1 HSPs)
scaffold0320 (3-72)||(12384-12453)
[»] scaffold0243 (1 HSPs)
scaffold0243 (2-70)||(5784-5852)
[»] scaffold0012 (2 HSPs)
scaffold0012 (105-328)||(225539-225763)
scaffold0012 (11-72)||(227881-227942)
[»] scaffold0621 (1 HSPs)
scaffold0621 (11-145)||(6852-6987)
[»] scaffold0333 (2 HSPs)
scaffold0333 (1-143)||(6931-7073)
scaffold0333 (1-143)||(14311-14453)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-72)||(15491-15562)
[»] scaffold0022 (2 HSPs)
scaffold0022 (3-72)||(80727-80796)
scaffold0022 (315-347)||(116539-116571)
[»] scaffold0586 (1 HSPs)
scaffold0586 (1-69)||(2245-2313)
[»] scaffold0423 (1 HSPs)
scaffold0423 (1-38)||(10933-10970)
[»] scaffold0198 (1 HSPs)
scaffold0198 (254-347)||(23956-24048)
[»] scaffold0004 (3 HSPs)
scaffold0004 (172-347)||(69907-70082)
scaffold0004 (3-69)||(332784-332850)
scaffold0004 (12-71)||(58102-58161)
[»] scaffold0040 (1 HSPs)
scaffold0040 (1-72)||(103244-103315)
[»] scaffold0139 (2 HSPs)
scaffold0139 (277-346)||(20095-20165)
scaffold0139 (1-72)||(38762-38833)
[»] scaffold0123 (1 HSPs)
scaffold0123 (3-69)||(25574-25640)
[»] scaffold0076 (1 HSPs)
scaffold0076 (2-72)||(24182-24252)
[»] scaffold0601 (1 HSPs)
scaffold0601 (3-72)||(7119-7188)
[»] scaffold0005 (2 HSPs)
scaffold0005 (3-72)||(268117-268186)
scaffold0005 (1-70)||(307460-307529)
[»] scaffold0367 (1 HSPs)
scaffold0367 (1-73)||(1278-1350)
[»] scaffold0131 (1 HSPs)
scaffold0131 (277-347)||(36569-36640)
[»] scaffold0098 (1 HSPs)
scaffold0098 (1-72)||(29150-29221)
[»] scaffold0525 (1 HSPs)
scaffold0525 (12-70)||(3560-3618)
[»] scaffold0259 (1 HSPs)
scaffold0259 (12-70)||(10541-10599)
[»] scaffold0233 (1 HSPs)
scaffold0233 (12-70)||(14224-14282)
[»] scaffold0109 (2 HSPs)
scaffold0109 (12-70)||(27006-27064)
scaffold0109 (1-45)||(35531-35575)
[»] scaffold0077 (1 HSPs)
scaffold0077 (3-45)||(55271-55313)
[»] scaffold0029 (1 HSPs)
scaffold0029 (12-70)||(125797-125855)
[»] scaffold0013 (1 HSPs)
scaffold0013 (12-70)||(9704-9762)
[»] scaffold0476 (2 HSPs)
scaffold0476 (16-73)||(8190-8247)
scaffold0476 (14-71)||(13233-13290)
[»] scaffold0737 (1 HSPs)
scaffold0737 (3-71)||(1384-1452)
[»] scaffold0297 (1 HSPs)
scaffold0297 (283-346)||(15612-15676)
[»] scaffold0184 (1 HSPs)
scaffold0184 (94-146)||(3981-4033)
[»] scaffold0168 (1 HSPs)
scaffold0168 (94-146)||(3287-3339)
[»] scaffold0104 (2 HSPs)
scaffold0104 (94-146)||(2137-2189)
scaffold0104 (94-146)||(9819-9871)


Alignment Details
Target: chr5 (Bit Score: 297; Significance: 1e-167; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 7 - 347
Target Start/End: Complemental strand, 9078406 - 9078066
Alignment:
Q  7 atgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaatctgac 106  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||| ||| ||||||    
T  9078406 atgcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtagaatgagattgaacctggaaagatttagaatgaaaccttttgaattctgac 9078307  T
Q  107 ctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagttgttaag 206  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  9078306 ctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctgtgtcgcacaagttgttaag 9078207  T
Q  207 agttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgatataatg 306  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  9078206 ggttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagatgtgttgatgttgattatgatgtgatataatg 9078107  T
Q  307 ttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  9078106 ttatacgcattacttgagttatgaatgtataattgagatgt 9078066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 1 - 347
Target Start/End: Complemental strand, 1096927 - 1096581
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattt-agaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||  |||||||| |||||||||    
T  1096927 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaatctggaaagattgcagaatgaa-cttttggaa 1096829  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||| | ||||||||||||    
T  1096828 atctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagaatgcctttttagaattttgcgatctctgtcgcacaagt 1096729  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    |||||| ||||| |||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||| || |||| |||||||||||||||||    
T  1096728 tgttaaaagttggaccttggggtagtattgagacttaatgaggatgttaattataacctatgaagctgtttaagatgcgttgatgttgattatgatgtga 1096629  T
Q  300 tataatgttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    |||||||||||| |||||||||||||||||||||||||  ||||||||    
T  1096628 tataatgttatatgcattacttgaattatgaatgtatatgtgagatgt 1096581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 347
Target Start/End: Complemental strand, 24529681 - 24529334
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| || |||||||||||||||||||    
T  24529681 ccttagatgcttttcagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaaggttgtagaatgaaacttttggaa 24529582  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||  | ||| |||| |||    
T  24529581 ttctgatctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagagtcttgttaggtttttgcgacctttgttgcactagt 24529482  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
     ||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||| ||||||||||    
T  24529481 agttgagagttgaaccttggggtagtattgaaacttaatgatgatgttaactataatctgtgaagctgtttaagatgtgttgatgttgaatatgatgtga 24529382  T
Q  300 tataatgttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    |||||||||||| |||||||||||  ||||||||||||||| ||||||    
T  24529381 tataatgttataagcattacttgagatatgaatgtataattaagatgt 24529334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 21985808 - 21986146
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||     
T  21985808 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagatttagaatgaaacttttggaat 21985907  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||  | ||| |||| ||||    
T  21985908 tctgacctgaactcgccacggcaagcagaggccctcgcctcgcgagtgacccagaaacagagtgtcttgttaggtttttgcgacctttgttgcacgagtt 21986007  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||| |||||||||||||||||||||||| |||||| ||||||||||||| |||||| ||||||| |||||||| ||||||| |||||| ||||| |||||    
T  21986008 gttgagagttgaaccttggggtagtattcagacttgatgatgatgttaactataatttgtgaagttgtttaagatgtgttgatgttgaatatgaggtgat 21986107  T
Q  301 ataatgttatacgcattacttgaattatgaatgtataat 339  Q
    | ||||||||| |||||||||||  ||||||| ||||||    
T  21986108 aaaatgttatatgcattacttgagatatgaatttataat 21986146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 25421992 - 25421669
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||  ||| ||||||||| ||||| ||||||||||||||||||||| |||||    
T  25421992 ccttagatgcttttgagtgcctgaacatgtctattaatgattaggaaagaacttaggatgagattggacctggaaagatttagaatgaaactttcggaaa 25421893  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||| ||||||||||||| |||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||  | ||| |||| ||||    
T  25421892 tctgacttgaactcgccacggcgagtagaggctctcgcctcgcgagtgacctagaaaccgagtgccttgttaggattttgcgacctttgttgcacgagtt 25421793  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||    
T  25421792 gttgagagttgaaccttggggtagcattgagacttaatgatgatgttaattataatctgtgaagctgtttaagatgcgttgatgttgattatgatgtgat 25421693  T
Q  301 ataatgttatacgcattacttgaa 324  Q
    ||||||||||  ||||||||||||    
T  25421692 ataatgttatgtgcattacttgaa 25421669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 25431854 - 25431531
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||| ||| ||||||||| ||||| |||||||||||||||||||||||||||    
T  25431854 ccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagaatttaggatgagattggacctggaaagatttagaatgaaacttttggaaa 25431755  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||| ||||||||||||| |||| |||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||  | |||  ||| ||||    
T  25431754 tctgacttgaactcgccacggcgagtagaggctctcacctcgcgagtgacccagaaatcgagtgccttgttaggattttgcgacctttgttacacgagtt 25431655  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||    
T  25431654 gttgagagttgaaccttgaggtagcattgagacttaatgatgatgttaattataatctgtgaagctgtttaagatgcgttgatgttgattatgatgtgat 25431555  T
Q  301 ataatgttatacgcattacttgaa 324  Q
    ||||||||||  ||||||||||||    
T  25431554 ataatgttatgtgcattacttgaa 25431531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 24494028 - 24493705
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||| ||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| | |     
T  24494028 ccttaaatgcttttgaacgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagatttagaatgaaactttttggat 24493929  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||||||||| |||||||||||| |||||||| |||| ||||| |||||||||| ||||||||| ||||||||  | ||| |||| ||||    
T  24493928 tctgacctgaactcgccacggcgagcagaggctttcgcctcgtgagtaacccataaacagagtgtcttgttaggtttttgcgacctttgttgcacgagtt 24493829  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||| | ||||| ||||||||||||||||||    
T  24493828 gttgagagttgaaccttggggtagtattaagacttaataatgatgttaattataatctgtgaagctatttaagatatgttgatgttgattatgatgtgat 24493729  T
Q  301 ataatgttatacgcattacttgaa 324  Q
    ||||||||||  |||| |||||||    
T  24493728 ataatgttatgtgcatcacttgaa 24493705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 13095954 - 13095645
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||| ||| |     
T  13095954 ccttagatgcttttgaaagcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaaagatttagaatgaaacttgtgggat 13095855  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||||||||  ||||||||||| |||||||||||||||||| |||||||||||| ||||||||| ||||||||  | ||| |||| |||     
T  13095854 tctgacctgaactcgccacagcgagcagaggccctcgcctcgcgagtgacctagaaacagagtgacttgttaggtttttgcgacctttgttgcacgagtc 13095755  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||| | ||||| ||||||||| ||||||||    
T  13095754 gttgagagttgaaccttggggtagtattaagacttaatgatgatgttaattataatatgtgaagttgtttaagatatgttgatgttgattacgatgtgat 13095655  T
Q  301 ataatgttat 310  Q
    ||||||||||    
T  13095654 ataatgttat 13095645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 324
Target Start/End: Original strand, 23390157 - 23390480
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| ||| |    
T  23390157 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtggga 23390256  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     |||||||||||||||||| | |||| ||||||| ||||||| ||||||||||  ||||||||||||||||||| |||||| ||  | ||| |||| |||    
T  23390257 ttctgacctgaactcgccatggcgagtagaggctatcgcctcacgagtgaccctaaaacagagtgccttgttag-attttgtgacctttgttgcacgagt 23390355  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    |||  |||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||    
T  23390356 tgtcgagagttgaaccttgggatagtattaagacttaatgaggatgttaattataatctgtgaagctatttaagatgtgttgatgttgattatgatgtga 23390455  T
Q  300 tataatgttatacgcattacttgaa 324  Q
    |||||||||||  ||||||||||||    
T  23390456 tataatgttatgtgcattacttgaa 23390480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 13025770 - 13025461
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||| |||||||  |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||| ||| |     
T  13025770 ccttagatacttttgaaagcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaaagatttagaatgaaacttgtgggat 13025671  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||||||||  |||||| |||| |||||||||||||||||| |||||||||||| ||||||||| ||||||||  | ||| |||| | ||    
T  13025670 tctgacctgaactcgccacagcgagcaaaggccctcgcctcgcgagtgacctagaaacagagtgacttgttaggtttttgcgacctttgttgcacgattt 13025571  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||| | ||||| ||||||||| ||||||||    
T  13025570 gttgagagttgaaccttggggtagtattaagacttaatgatgatgttaattataatatgtgaagttgtttaagatatgttgatgttgattacgatgtgat 13025471  T
Q  301 ataatgttat 310  Q
    ||||||||||    
T  13025470 ataatgttat 13025461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 324
Target Start/End: Original strand, 8286514 - 8286826
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| |||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||          ||||||||||| ||| |     
T  8286514 ccttagatgcatttgagtgccggaacatgtctaataatgattaagaaagaatgtaggatgagattgaacctg----------gaatgaaacttgtgggat 8286603  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||| |||| |||| | ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||  | ||| ||   ||||    
T  8286604 tctgacctaaactagccatggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttag-attttgcgacctttgttgcttgagtt 8286702  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||| ||||||||||||| |||||||||| ||||||||||| ||||||||||||| | |||||||||||||||| ||||||| ||||||||||||||||||    
T  8286703 gttgagagttgaacctttgggtagtattaagacttaatgaagatgttaattatattatgtgaagctgtttaagatgtgttgatgttgattatgatgtgat 8286802  T
Q  301 ataatgttatacgcattacttgaa 324  Q
    ||||||||||  ||||||||||||    
T  8286803 ataatgttatgtgcattacttgaa 8286826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 323
Target Start/End: Complemental strand, 22075468 - 22075157
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| | ||||||||          ||||||||||| ||        
T  22075468 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggtaagaatgtaggatgaaaatgaacctg----------gaatgaaacttgtgaggt 22075379  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaa-cagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||  ||||||||  | ||| |||| |||    
T  22075378 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaaacagagtgacttgttag--ttttgcgacctttgttgcacgagt 22075281  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    |||| ||  || |||||| |||||| ||| ||||||||||| || |||||||||||| |||||||||||||||| ||||||| |||||||||||||||||    
T  22075280 tgttgaggattaaacctttgggtagcattaagacttaatgaagaggttaattataatatgtgaagctgtttaagatgtgttgttgttgattatgatgtga 22075181  T
Q  300 tataatgttatacgcattacttga 323  Q
    ||||||||| || |||||||||||    
T  22075180 tataatgttttatgcattacttga 22075157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 324
Target Start/End: Original strand, 21292642 - 21292953
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||          |||| |||||| |||||     
T  21292642 ccttagatgcttttgagtgcctgaacatgtctaataataattaggaaagaatgtaggatgagattgaacctg----------gaattaaacttgtggaat 21292731  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||| ||| ||||||||||  | ||| |||| ||||    
T  21292732 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaatagagtgacttttta-gattttgcgacctttgttgcacgagtt 21292830  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||   |||||| ||| | |||||| ||| ||||||||| |||| |||||||||||||||||||| ||| |||| | ||||| || |||||||||||||||    
T  21292831 gtcgggagttggacccttgggtaggattaagacttaataatgaggttaattataatctgtgaagttgtataagatatgttgttgatgattatgatgtgat 21292930  T
Q  301 ataatgttatacgcattacttgaa 324  Q
    |||||||| || ||||||||||||    
T  21292931 ataatgtt-tatgcattacttgaa 21292953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 3 - 325
Target Start/End: Original strand, 22107047 - 22107358
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaatc 102  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||          | |||||| ||| | ||    
T  22107047 ttagatgcgtttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggacgagattgaacctgaaa----------ttaaacttgtgggattc 22107136  T
Q  103 tgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagttgt 202  Q
    |||||||||||| ||| | ||||||||||||||||||||||||||||||| |||| |||||||||||| |  | |||||||  | ||| |||| ||||||    
T  22107137 tgacctgaactcaccatggcgagcagaggctctcgcctcgcgagtgacccggaaatagagtgccttgtgat-actttgcgacctttgttgcacgagttgt 22107235  T
Q  203 taagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgatat 302  Q
    | |||| |||||||| | |||||||| ||||||||||| || ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  22107236 tgagagatgaacctttgagtagtattaagacttaatgaagaggttaattataatctgtgaagctgtttaaggtgtgttgttgttgattatgatgtgatat 22107335  T
Q  303 aatgttatacgcattacttgaat 325  Q
    ||| |  || |||||||||||||    
T  22107336 aatatattatgcattacttgaat 22107358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 11580906 - 11581130
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||| |||||||| |||| ||||  |    
T  11580906 ccttagaagcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggatagattttagaataaaac-tttgaga 11581004  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||||||   ||||| ||| |  ||||||||||||||| | ||||| || |||    
T  11581005 atctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccatttacagaatgcttgtttaggattttgcgatctttgtcgtacgagt 11581104  T
Q  200 tgttaagagttgaaccttggggtagt 225  Q
     ||| |||||||||||||||||||||    
T  11581105 cgttgagagttgaaccttggggtagt 11581130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 36154489 - 36154713
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| | ||| |||||||| |||| ||||  |    
T  36154489 ccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtagagtgagattgaacctggatagattttagaataaaac-tttgaga 36154587  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
    ||||||||||||||||||| | |||| ||||||||||||||||||||||||| |   ||||| ||| |  ||||||||||||||| | |||||||| |||    
T  36154588 atctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagtgacctatttacagaatgcttgtttaggattttgcgatctttgtcgcacgagt 36154687  T
Q  200 tgttaagagttgaaccttggggtagt 225  Q
     ||| |||||||||||||||||||||    
T  36154688 cgttgagagttgaaccttggggtagt 36154713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 22119854 - 22119998
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| |  ||    
T  22119854 ccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggagaa 22119953  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||| |||||||||||| | |||||||||||||||||||||||||    
T  22119954 tctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 22119998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 19660498 - 19660643
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttgga-a 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||| |||||||||||  |||||| |    
T  19660498 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtggaatgagattaaacctggaaagacttagaatgaaaactttggaga 19660597  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    |||| ||| |||||||||| | |||||||||||||||||||||||||    
T  19660598 atctaacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 19660643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 24766998 - 24767142
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| ||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||| ||| ||||| ||||||||||||||| |  ||    
T  24766998 ccttagatgcctttgagtgcctgaacatgtctaatattgattacgaaagaatgtaggatgagattgaatctggaaagacttagaatgaaactttggagaa 24767097  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||| ||||||||| || | |||||||||||||||||||||||||    
T  24767098 tctga-ctgaactcgtcatggcgagcagaggctctcgcctcgcgag 24767142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 3 - 328
Target Start/End: Complemental strand, 22144508 - 22144182
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattta-gaatgaaacttttggaaat 101  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||||||| | |||| |||||||||||||| ||  ||||| ||||| |  |||||| | |    
T  22144508 ttagatgattttgagtgcctgaacatgtgtaacaatgattaggaaagattctagattgagattgaacctggaataatttaagaatggat-ttttgggagt 22144410  T
Q  102 ctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagttg 201  Q
       ||||||||||||||   |||| |||||||||||||||||||||  |||||  ||||| ||| |  ||||||||||||||| | |||||||| |||||    
T  22144409 tacacctgaactcgccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaatgcttgtttaggattttgcgatctttgtcgcacgagttg 22144310  T
Q  202 ttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtt-taagttgtgttggtgttgattatgatgtgat 300  Q
    || ||||||||||||||| || ||| |||   ||  | ||||| ||||| || | |||||||| |||| |||| ||  ||| ||||| |||  |||||||    
T  22144309 ttgagagttgaaccttggagtcgtaatgaagattgtttatgatattaatgatgacctgtgaagttgttataagatgaattgatgttgtttacaatgtgat 22144210  T
Q  301 ataatgttatacgcattacttgaattat 328  Q
    |||||  |||| ||||||||||||||||    
T  22144209 ataattgtatatgcattacttgaattat 22144182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 21566004 - 21565863
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||| ||||||||| || ||| |  |    
T  21566004 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatg-aattttcgtga 21565906  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcg 142  Q
    ||   |||||||||||||| | |||||||||||||||||||||    
T  21565905 attgtacctgaactcgccatggcgagcagaggctctcgcctcg 21565863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 22959194 - 22959339
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| | ||| |||||||||||  |||| |      
T  22959194 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggagagactttagaatgaa--tttttgtg 22959291  T
Q  100 atctg-acctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    | ||| |||||||||||||| | |||| ||||||||||||||||||||    
T  22959292 aactgaacctgaactcgccatggcgagtagaggctctcgcctcgcgag 22959339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 21871232 - 21871463
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||| ||||| ||||||||||||||| ||||||| | |||||  |||||||  |    
T  21871232 ccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagagtgtaggatgagattgaacctggaaagattatggaatg-gacttttgtga 21871330  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggat-tttgcgatttgtgtcgcacaag 198  Q
     ||||||||| |||||||| | |||| |||||||| || ||||||||  | ||| | ||||| ||||||| |||| |    |||||   |||||||  ||    
T  21871331 ttctgacctgtactcgccatggcgagtagaggctcccggctcgcgagctaaccaaatacagaatgccttgctaggttaaacgcgatccttgtcgcatgag 21871430  T
Q  199 ttgttaagagttgaaccttggggtagtattgag 231  Q
    |||||| ||||||||||||||| ||||| ||||    
T  21871431 ttgttatgagttgaaccttgggatagtaatgag 21871463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 21875512 - 21875743
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||| ||||| ||||||||||||||| ||||||| | |||||  |||||||  |    
T  21875512 ccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagagtgtaggatgagattgaacctggaaagattatggaatg-gacttttgtga 21875610  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggat-tttgcgatttgtgtcgcacaag 198  Q
     ||||||||| |||||||| | |||| |||||||| || ||||||||  | ||| | ||||| ||||||| |||| |    |||||   |||||||  ||    
T  21875611 ttctgacctgtactcgccatggcgagtagaggctcccggctcgcgagctaaccaaatacagaatgccttgctaggttaaacgcgatccttgtcgcatgag 21875710  T
Q  199 ttgttaagagttgaaccttggggtagtattgag 231  Q
    |||||| ||||||||||||||| ||||| ||||    
T  21875711 ttgttatgagttgaaccttgggatagtaatgag 21875743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 19669360 - 19669219
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||| ||  |||||||||||||| || ||||| |||||||||||  |||||  |    
T  19669360 ccttagatgtttttgagtgtctgaacatgtctaataatgattaggaaagattggggaatgagattgaacgtggaaagactttagaatgaattttttgtga 19669261  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctc 141  Q
    ||   |||||||||||||| | || | |||||||||||||||    
T  19669260 attgtacctgaactcgccatggcgtgtagaggctctcgcctc 19669219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 21329156 - 21329326
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattta-gaatgaaacttttggaa 99  Q
    ||||||||| ||||||||||||||||||||||| | |||||||| ||||| | |||| |||||||||||||| ||  ||||| ||||| || |||||| |    
T  21329156 ccttagatgtttttgagtgcctgaacatgtctagttatgattagaaaagattctagattgagattgaacctggaataatttaggaatg-aatttttggga 21329254  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtt 171  Q
     |   || |||||||||||   |||| ||||||||||||||||||| | ||| ||  ||||| |||||||||    
T  21329255 gttgcacttgaactcgccatagcgagtagaggctctcgcctcgcgaattacctagttacagaatgccttgtt 21329326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 2 - 171
Target Start/End: Original strand, 5888837 - 5889006
Alignment:
Q  2 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct-gaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||| |||||||||||||||| ||| | || |||||||||||||| |||||| ||||||||||| | ||| || || |||||||| | ||||  |     
T  5888837 cttagatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacatggaatagtttaagaatgaatc-tttgtgag 5888935  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtt 171  Q
    |   |||||||||||||| | |||| ||||||||||||||||||||  |||||   ||||| |||||||||    
T  5888936 ttgcacctgaactcgccatggcgagtagaggctctcgcctcgcgagctacccatttacagaatgccttgtt 5889006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 21498678 - 21498749
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    |||| |||| |||||||||||||||||||| ||||||| ||||||| ||| |||||| ||||||||||||||    
T  21498678 ccttggatgtttttgagtgcctgaacatgtataataattattaggagagattgtagattgagattgaacctg 21498749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 246 - 297
Target Start/End: Complemental strand, 22412388 - 22412337
Alignment:
Q  246 ttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgt 297  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  22412388 ttaattataatctgtgaagctgtttaagatgtgttgatgttgattatgatgt 22412337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 20026526 - 20026592
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||| |||||||||||||||||||| |||||||||||||| |||  | |||| |||||||||||    
T  20026526 ttagatgattttgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaac 20026592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 347
Target Start/End: Complemental strand, 37724086 - 37724015
Alignment:
Q  277 tgttggtgttgattatgatgtgatataatgttatac-gcattacttgaattatgaatgtataattgagatgt 347  Q
    |||| ||||||| |||||||||||||||||||  |  ||||||||||||||||||||| || ||||||||||    
T  37724086 tgttagtgttgaatatgatgtgatataatgtttaattgcattacttgaattatgaatgaatgattgagatgt 37724015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 22177807 - 22177876
Alignment:
Q  4 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctga 73  Q
    |||||| ||||||||||||||| |||| |||||||||||||| |||  | |||| |||| ||||||||||    
T  22177807 tagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagtttgaacctga 22177876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 41294112 - 41294176
Alignment:
Q  6 gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    ||||| || ||||||||||||||| ||| || |||||||||| |||||||| || ||||||||||    
T  41294112 gatgccttagagtgcctgaacatgcctagtattgattaggaatgaatgtaggatcagattgaacc 41294176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 18418793 - 18418714
Alignment:
Q  246 ttaattataatctgtgaagctgttt-aagttgtgttggtgttgattatgatgtgatataatgttatacgcattacttgaa 324  Q
    |||||||||| |||||||||||||| ||| ||| |||   |||||||||||||||||||||||| |   |||||||||||    
T  18418793 ttaattataacctgtgaagctgttttaagatgttttgacattgattatgatgtgatataatgttgtgtacattacttgaa 18418714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 21294947 - 21295006
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  21294947 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 21295006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 21741204 - 21741275
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||  |||||||||||||||| ||| | || |||| ||||||||| | |||| ||||||||||||||    
T  21741204 ccttagatatttttgagtgcctgaacttgtatgatgatgaataggaaagattatagattgagattgaacctg 21741275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 15441638 - 15441696
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  ||||||||||    
T  15441638 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacc 15441696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 25406847 - 25406789
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  25406847 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 25406789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 25535409 - 25535351
Alignment:
Q  13 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    ||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  25535409 ttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 25535351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 26732421 - 26732463
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 45  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||    
T  26732421 ttagatgattttgagtgcctgaacatgtataagaatgattagg 26732463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 26740234 - 26740276
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 45  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||    
T  26740234 ttagatgattttgagtgcctgaacatgtataagaatgattagg 26740276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 17284499 - 17284430
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  17284499 ccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 17284430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 154
Target Start/End: Original strand, 21501919 - 21501968
Alignment:
Q  105 acctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccag 154  Q
    ||||||||||||||   |||| ||||||||||||||||||||| ||||||    
T  21501919 acctgaactcgccatagcgagtagaggctctcgcctcgcgagttacccag 21501968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 22588516 - 22588459
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    |||||||||||||||||  ||| || |||||||||| |||||||| || |||||||||    
T  22588516 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaac 22588459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 23336973 - 23337030
Alignment:
Q  13 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    ||||||||||||||||  ||| ||||||||||||| |||||||| |  ||||||||||    
T  23336973 ttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacc 23337030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 25574056 - 25574097
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattag 44  Q
    ||||||| |||||||||||||||||||| ||| |||||||||    
T  25574056 ttagatggttttgagtgcctgaacatgtataagaatgattag 25574097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 25575249 - 25575290
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattag 44  Q
    ||||||| |||||||||||||||||||| ||| |||||||||    
T  25575249 ttagatggttttgagtgcctgaacatgtataagaatgattag 25575290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 25576442 - 25576483
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattag 44  Q
    ||||||| |||||||||||||||||||| ||| |||||||||    
T  25576442 ttagatggttttgagtgcctgaacatgtataagaatgattag 25576483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 26011697 - 26011766
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| || |||||| || ||||||| |||||||||||| |||||| | || | ||||||||||||||    
T  26011697 ttagatgattatgagtgtctaaacatgtgtaataatgattaagaaagattctaaattgagattgaacctg 26011766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 123062 - 123114
Alignment:
Q  94 ttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||||| ||| |||| |||||||| | |||||||| ||||||||||||||||    
T  123062 ttggaaacctggcctgtactcgccatggcgagcagatgctctcgcctcgcgag 123114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 19472476 - 19472528
Alignment:
Q  94 ttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||||| ||| | || |||||||||| |||||||| ||||||||||||||||    
T  19472476 ttggaaagctggcttgtactcgccacggcgagcagatgctctcgcctcgcgag 19472528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 19992305 - 19992261
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtag 56  Q
    |||||||||||||||||| ||| || |||||||||| ||||||||    
T  19992305 tttgagtgcctgaacatgcctagtattgattaggaatgaatgtag 19992261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 147
Target Start/End: Original strand, 20026706 - 20026746
Alignment:
Q  107 ctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
    |||||||||||||  |||| |||||||||||||||||||||    
T  20026706 ctgaactcgccacagcgagtagaggctctcgcctcgcgagt 20026746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 297
Target Start/End: Original strand, 20766035 - 20766087
Alignment:
Q  246 ttaattataatctgtgaagctg-tttaagttgtgttggtgttgattatgatgt 297  Q
    ||||| |||||||||||||||| |||| | ||||||| |||||||||||||||    
T  20766035 ttaatgataatctgtgaagctgttttaggatgtgttgatgttgattatgatgt 20766087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 20766095 - 20766127
Alignment:
Q  315 attacttgaattatgaatgtataattgagatgt 347  Q
    ||||||||||||||||||||||| |||||||||    
T  20766095 attacttgaattatgaatgtatatttgagatgt 20766127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 20805910 - 20805858
Alignment:
Q  94 ttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||||||||| | || |||||||| | |||||||| ||||||||||||||||    
T  20805910 ttggaaatctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 20805858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 22120033 - 22120085
Alignment:
Q  179 tgcgatttgtgtcgcacaagttgttaagagttgaaccttggggtagtattgag 231  Q
    |||||| | |||||||| |||||||| ||||||||||||||| ||||| ||||    
T  22120033 tgcgatctttgtcgcacgagttgttatgagttgaaccttgggatagtaatgag 22120085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 22334501 - 22334545
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtag 56  Q
    |||||||||||||||||| ||| || |||||||||| ||||||||    
T  22334501 tttgagtgcctgaacatgcctagtattgattaggaatgaatgtag 22334545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 22412329 - 22412297
Alignment:
Q  315 attacttgaattatgaatgtataattgagatgt 347  Q
    ||||||||||||||||||||||| |||||||||    
T  22412329 attacttgaattatgaatgtatatttgagatgt 22412297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 23201732 - 23201680
Alignment:
Q  94 ttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    |||| |||||| |||| |||||||| | |||||||| ||||||||||||||||    
T  23201732 ttgggaatctggcctgtactcgccatggcgagcagatgctctcgcctcgcgag 23201680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 23535346 - 23535398
Alignment:
Q  94 ttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    |||| |||||||| || |||||||| | |||||||| ||||||||||||||||    
T  23535346 ttgggaatctgacttgtactcgccatggcgagcagatgctctcgcctcgcgag 23535398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 31342466 - 31342414
Alignment:
Q  94 ttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||| |||||  |||||||||||| | |||||||| ||||||||||||||||    
T  31342466 ttggagatctgggctgaactcgccatggcgagcagatgctctcgcctcgcgag 31342414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 287; Significance: 1e-161; HSPs: 65)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 1 - 347
Target Start/End: Original strand, 19303202 - 19303548
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19303202 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 19303301  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  19303302 tctgacctgaactcgccacggcgagcagaggctctcgcctcgagagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 19303401  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    | |||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||    
T  19303402 gctaagagttgaaccttggggtagcactgagaattaatgatgatgttaattataatctgtgaagctgttgaagatgtgttgatgttgattatgatgtgat 19303501  T
Q  301 ataatgttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    ||||||||||   ||||||||||| ||||||||||||||||||||||    
T  19303502 ataatgttatgtacattacttgaaatatgaatgtataattgagatgt 19303548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 1 - 347
Target Start/End: Complemental strand, 20594233 - 20593887
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    ||||||||| |||||||||||| |||||||||||  ||||||||| |||||||||| ||||||||||||||| ||||||| |||||| ||||||||||||    
T  20594233 ccttagatgtttttgagtgcctaaacatgtctaaatatgattagggaagaatgtaggatgagattgaacctggaaagattgtagaat-aaacttttggaa 20594135  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  20594134 atctgacctgaactcgctacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgccttgttaggattttgcgatctgtgtcgcacaagt 20594035  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  20594034 tgttaagggttgaaccttggggtagtattgagacttaatgataatgataattataatctgtgaagctgtttaagatgtgttgatgttgattatgatgtga 20593935  T
Q  300 tataatgttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    |||| ||||||||||||||||||| |||||| ||||||||||||||||    
T  20593934 tatattgttatacgcattacttgatttatgattgtataattgagatgt 20593887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 1 - 347
Target Start/End: Complemental strand, 29061000 - 29060654
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||| ||||||| ||||||||| |||||||||    
T  29061000 ccttagatgcttttgagtgcctgaacatgtccaataatgattaggaaggaatgtaggatgagattgaacctggaaagattgtagaatgaa-cttttggaa 29060902  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||| |||| |||    
T  29060901 atctgacctgaactcgccacgacgagtagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagt 29060802  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    || |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||| ||    
T  29060801 tgctaagagctgaaccttggggtagtattgagacttaatgatgatattaattataatctgtgaagctgtttaagatgtgttgatgttgattatgatgaga 29060702  T
Q  300 tataatgttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    |||||||||||  ||||||||||||||||||||||||| |||||||||    
T  29060701 tataatgttatgtgcattacttgaattatgaatgtatacttgagatgt 29060654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 347
Target Start/End: Original strand, 18409488 - 18409834
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||     
T  18409488 ccttagatgcttttgagtgccttaacatgtctattaatgattaggaaagaatgtagaatgagattgaacctggaaagatttagaatgaaactttttgaat 18409587  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||  | ||| |||| ||||    
T  18409588 tctgacctgaactcgccacggcgagcagaggctctcgcctctctagtgacccagaaacagagtgccttgttaggattttacgacctttgttgcacgagtt 18409687  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
     || ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||    
T  18409688 attgagagttgaaccttagggtagtattgagacttaatgatgatgttaattataatatgtgaagctgtttaagatgtgttgatgttgattatgatgtgat 18409787  T
Q  301 ataatgttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    ||||||||||| | |||| |||||||||||||| || ||||||||||    
T  18409788 ataatgttatatgtattatttgaattatgaatggatgattgagatgt 18409834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 347
Target Start/End: Original strand, 25629016 - 25629362
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattt-agaatgaaacttttggaa 99  Q
    ||||||||| | || || |||| ||||| |||| |||||||||||||| | ||||||||||||||||||||| ||| |||| ||||| |||||||||  |    
T  25629016 ccttagatgttgttaagcgcctaaacatctctattaatgattaggaaatattgtagaatgagattgaacctggaaatattttagaat-aaacttttgtga 25629114  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     | ||||||| |||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||| |||    
T  25629115 ttatgacctgtactcgccgtggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacttttgttgcacgagt 25629214  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  25629215 tgttaagagttgaaccttggggtagtattgagacttaatgatgttgttaattataatctgtgaagctgtttaagatgtgttgatgttgattatgatgtga 25629314  T
Q  300 tataatgttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25629315 tataatgttatacgcattacttgaattatgaatgtataattgagatgt 25629362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 324
Target Start/End: Original strand, 20637955 - 20638267
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||          ||||||||||| ||| |     
T  20637955 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaatgaaacttgtgggat 20638044  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||  | ||| |||| ||||    
T  20638045 tctgacctgaactcgccacggcgagcaaaggctctcacctcgcgagtgacccagaaacagagtgccttgttag-attttgcgacctttgttgcacgagtt 20638143  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||  |||||||||||||||| ||  ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  20638144 gtcgagagttgaaccttgggataacattaagacttaatgatgatgttaattataatctgtgaagctgtttaagatgtgttgatgttgattatgatgtgat 20638243  T
Q  301 ataatgttatacgcattacttgaa 324  Q
    |||| ||| || ||||||||||||    
T  20638244 ataacgttttatgcattacttgaa 20638267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 324
Target Start/End: Original strand, 20360632 - 20360944
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||          ||||||||||| ||| |     
T  20360632 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaatgaaacttgtgggat 20360721  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||  | ||| |||| ||||    
T  20360722 tctgacctgaactcgccatggcgagctgaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagg-ttttgcgacctttgttgcacgagtt 20360820  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||| ||  ||||||||| |||||||||| |||||||||||||| |||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||    
T  20360821 gttgaggattgaacctttgggtagtattaagacttaatgatgaggttaattataatatgtgaagctgtttaagatgtgttgttgttgattatgatgtgat 20360920  T
Q  301 ataatgttatacgcattacttgaa 324  Q
    ||||||||||| ||||||||||||    
T  20360921 ataatgttatatgcattacttgaa 20360944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 22779888 - 22780195
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| ||| |    
T  22779888 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtggga 22779987  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     |||||||| ||||||||||| | |||| ||||||||||||||||||| ||| |||||||||||| | ||||||| ||||| ||  | ||| ||||||||    
T  22779988 ttctgacctaaactcgccacggcaagcaaaggctctcgcctcgcgagtaacctagaaacagagtgtcctgttagg-ttttgtgacctttgttgcacaagt 22780086  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    ||   |||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||| |||||    
T  22780087 tgccgagagttgaaccttggggtagtataaagacttaatgatgatgttaatcataatctgtgaagctgtttaagatgtgttgatgttgattatgttgtga 22780186  T
Q  300 tataatgtt 308  Q
    |||||||||    
T  22780187 tataatgtt 22780195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 324
Target Start/End: Original strand, 17287457 - 17287780
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||| ||||||| ||||||||||||| ||| |    
T  17287457 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgtgattgtacctggaaagattgtagaatgaaacttgtggga 17287556  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     |||||||| ||||||||||| |||  ||||||||| | |||| ||||||||||||||||||||| ||||||||| ||| || || | ||| |||| |||    
T  17287557 ttctgacctaaactcgccacggcgattagaggctcttgtctcgtgagtgacccagaaacagagtgtcttgttagggttt-gctatctttgttgcacgagt 17287655  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    |||| |||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||  |||||||||| | |||    
T  17287656 tgttgagagttgaaccttggggtagcattgagacttaatgaggatgttaattataacctgtgaagctgtttaagatgtgttgaggttgattatgttatga 17287755  T
Q  300 tataatgttatacgcattacttgaa 324  Q
     ||||||||||  ||||||||||||    
T  17287756 cataatgttatgtgcattacttgaa 17287780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 28496134 - 28496280
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||  ||    
T  28496134 ccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagacttagaatgaaacttttgagaa 28496233  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||    
T  28496234 tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 28496280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 324
Target Start/End: Original strand, 16920305 - 16920616
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| || |||||| |||||          |||| |||||| |||||     
T  16920305 ccttagatgcttttgagtgcctgaatatgtctaataatgattagaaaagaatgtaggataagattgtacctg----------gaattaaacttatggaat 16920394  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||| |||| |||||| |||||||||||  | ||| |||| | ||    
T  16920395 tctgacctgaactcgccatggcgagcagaggctctcgccttgcgagtgacccagaaacaaagtgacttgtt-ggattttgcgacctttgttgcacgattt 16920493  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
     |  ||||||||||| | |||||| ||| ||||||||  |||| ||||| |||||||| ||||||||  |||| |  |||| |||||||||||||||| |    
T  16920494 ctcgagagttgaacccttgggtagaattaagacttaagaatgaggttaactataatctatgaagctgaataagataagttgttgttgattatgatgtggt 16920593  T
Q  301 ataatgttatacgcattacttgaa 324  Q
    |||||||| || ||||||||||||    
T  16920594 ataatgtt-tatgcattacttgaa 16920616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 18821491 - 18821731
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||          ||||||||||| ||| |     
T  18821491 ccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctg----------gaatgaaacttgtgggat 18821580  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||  | ||| |||| ||||    
T  18821581 tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagcgacccagaaacagagtgacttgtta-gattttgcgacctttgttgcacgagtt 18821679  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaatta 252  Q
    ||  |||||||||||||||||||| ||| |||||| |  ||||| |||||||    
T  18821680 gtcgagagttgaaccttggggtagcattaagacttgaatatgatattaatta 18821731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 29808544 - 29808691
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga--tttagaatgaaacttttgga 98  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||  ||||||||||||| |||||     
T  29808544 ccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagatttttagaatgaaac-tttggg 29808642  T
Q  99 aatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||    
T  29808643 aatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 29808691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 22831951 - 22831640
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||  ||||||||||||||| |||||||  |||||| ||| | |||||||||||||          |||| |||||  ||| |     
T  22831951 ccttagatgcttttgagtgtttgaacatgtctaatattgattagtgaagaatataggacgagattgaacctg----------gaattaaactgatgggat 22831862  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    ||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||  | |||||||| | |     
T  22831861 tctaacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgaccgagaaacagagtgacttgtt-ggattttgcgacctttgtcgcacgattc 22831763  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||  ||||||||||| | |||||| ||| |||||| |  |||| ||||| |||||||||||||||||  |||| | ||||| |||||||||||||||| |    
T  22831762 gtcgagagttgaacccttgggtagaattaagacttgagaatgaggttaactataatctgtgaagctgaataagatatgttgttgttgattatgatgtgtt 22831663  T
Q  301 ataatgttatacgcattacttgaa 324  Q
    |||||||| || ||||||||||||    
T  22831662 ataatgtt-tatgcattacttgaa 22831640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 18457174 - 18456955
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |   ||| |||||| ||||||| | ||    
T  18457174 ccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggattaattaagaatg-aactttttggaa 18457076  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtt-aggattttgcgatttgtgtcgcacaagt 199  Q
     |||||||||||| |||| | |||| |||||||||||||||||||||  ||||   |||||  |||||||| ||||||||||||| | |||||||| |||    
T  18457075 gctgacctgaactagccatggcgagtagaggctctcgcctcgcgagttgcccaattacaga-agccttgttcaggattttgcgatctttgtcgcacgagt 18456977  T
Q  200 tgttaagagttgaaccttgggg 221  Q
     ||| |||||||||||||||||    
T  18456976 cgttgagagttgaaccttgggg 18456955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 347
Target Start/End: Original strand, 25611384 - 25611730
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaac-ttttggaa 99  Q
    |||||||||| |||||||||||||||||||||||||||||||||||  ||||| || ||||||||| ||||| ||||| ||||||||||||   || | |    
T  25611384 ccttagatgcctttgagtgcctgaacatgtctaataatgattaggagtgaatgcagcatgagattggacctggaaagacttagaatgaaacaacttagga 25611483  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     |||||||||||||||||| |  ||||||||||||||||||||||||  |  |   |||||||||| |||| ||||  ||||||| |||||||||  |||    
T  25611484 ttctgacctgaactcgccatggagagcagaggctctcgcctcgcgagctagtctagaacagagtgcattgtgagga-cttgcgatctgtgtcgcatgagt 25611582  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    |  | ||||||||||||| ||||||  ||  |||||||||| |||||| |  | ||||| |||||||||||||| ||| | |   |||||||||||||||    
T  25611583 tacttagagttgaacctttgggtagctttaggacttaatgacgatgtttaacagaatctatgaagctgtttaagatgtttagtcattgattatgatgtga 25611682  T
Q  300 tataatgttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    ||| ||||| ||  ||||||||||| | | | || |||||||||||||    
T  25611683 tatgatgttgtatacattacttgaagttttattgaataattgagatgt 25611730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 12 - 347
Target Start/End: Original strand, 25603057 - 25603392
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaactt-ttggaaatctgacctga 110  Q
    |||||||||||||||||||||||||||||||||||  ||||| |  ||||||||| ||||| ||||| ||||||||||||   || | | |||||| |||    
T  25603057 tttgagtgcctgaacatgtctaataatgattaggagtgaatgcatgatgagattggacctggaaagacttagaatgaaacaacttaggattctgacttga 25603156  T
Q  111 actcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagttgttaagagtt 210  Q
    |||| ||| | ||||||||||||||||||||| |||  |  |   |||||||||| |||| |||| || ||||| |||||||||  ||||| | ||||||    
T  25603157 actcaccatggcgagcagaggctctcgcctcgtgagctagtctagaacagagtgcattgtgaggactt-gcgatctgtgtcgcatgagttgcttagagtt 25603255  T
Q  211 gaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgatataatgttat 310  Q
    ||||||| ||||||  || ||||||||||| |||||| | || |||||||||||||||||||| ||| | |   |||||||||||||||||| ||||| |    
T  25603256 gaacctttgggtagctttaagacttaatgacgatgtttaatagaatctgtgaagctgtttaagatgtttagtcattgattatgatgtgatatgatgttgt 25603355  T
Q  311 acgcattacttgaattatgaatgtataattgagatgt 347  Q
    |  ||||||||||| | | | || |||||||||||||    
T  25603356 atacattacttgaagttttattgaataattgagatgt 25603392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 1561763 - 1561622
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatg-aaacttttggaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| | |||||||| |||||||||  |    
T  1561763 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaagtagaatgagattgaacctggaaaaacttagaatgaaaacttttgaga 1561664  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcg 142  Q
    |||||||| ||||| |||||| |||||| ||||||||||||||    
T  1561663 atctgacc-gaacttgccacggcgagcataggctctcgcctcg 1561622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 21939843 - 21939699
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||  |||||||||||||||||| ||||| ||||||||||||||||||| |||||||||| |||| ||||| ||||||| ||||||| |  ||    
T  21939843 ccttagatgcccttgagtgcctgaacatgtgtaatattgattaggaaagaatgtaggatgagattgagcctggaaagacttagaataaaactttggagaa 21939744  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||| |||||||||||| | |||||||||||||||||||||||||    
T  21939743 tctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 21939699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 4667874 - 4668019
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||| ||||| ||||| |||||||||||  |||| |      
T  4667874 ccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagtttagaatgaa--tttttgtg 4667971  T
Q  100 atctg-acctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    | ||| |||||||||||||| | |||| ||||||||||||||||||||    
T  4667972 aactgaacctgaactcgccatggcgagtagaggctctcgcctcgcgag 4668019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 19652655 - 19652512
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||| |||||||||||  |||  |||    
T  19652655 ccttaaatgtttttgagtgcctgaacatgtctaataatgattaggaaagattgaagaatgagattgaacctggaaagactttagaatgaatttttgtgaa 19652556  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcg 144  Q
     | | |||||||||||||| | |||| ||||||||||||||||||    
T  19652555 ttgt-acctgaactcgccatggcgagtagaggctctcgcctcgcg 19652512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 4185484 - 4185629
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    |||||||||||||||||||| |||||| ||||||||| ||||| ||||||||||||| |||||||||||||| ||||| |||||||||||  |||| |      
T  4185484 ccttagatgcttttgagtgcatgaacaagtctaataacgattatgaaagaatgtagagtgagattgaacctggaaagagtttagaatgaa--tttttgtg 4185581  T
Q  100 atctg-acctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    | ||| |||||||||||||| | |||| ||||||||||||||||||||    
T  4185582 aactgaacctgaactcgccatggcgagtagaggctctcgcctcgcgag 4185629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 11185951 - 11185780
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| |||||||||||||||||||| |||| |||||||  |||| ||||| | |||||||||||||          |||| |||||| ||| |     
T  11185951 ccttagatgcctttgagtgcctgaacatgtcgaatattgattagtgaagagtgtaggacgagattgaacctg----------gaattaaacttatgggat 11185862  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcga 183  Q
    ||| |||||||||||||||| ||||||||||| ||||||||| |||||||||||||||| |||| ||||||| ||||||||||    
T  11185861 tctaacctgaactcgccacggcgagcagaggccctcgcctcgtgagtgacccagaaacatagtgacttgtta-gattttgcga 11185780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 15894091 - 15894237
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaa-cttttggaa 99  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||  |||||||  ||||||||| ||||| ||||| |||||||||||    |||| |    
T  15894091 ccttagatgcctttgagtgcctgaacatgtctaatattgattaggagtgaatgtaagatgagattggacctggaaagacttagaatgaaagaacttggga 15894190  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
     |||||||||||||||||| | ||||||||| ||||| |||||||||    
T  15894191 ttctgacctgaactcgccatggcgagcagagtctctcacctcgcgag 15894237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 4189416 - 4189271
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||| ||||| ||||| |||||||||||  |||| |      
T  4189416 ccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagtttagaatgaa--tttttgtg 4189319  T
Q  100 atctg-acctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    | ||| |||| |||||| || | |||| ||||||||||||||||||||    
T  4189318 aactgaacctaaactcgtcatggcgagtagaggctctcgcctcgcgag 4189271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 4674721 - 4674866
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||| ||||| ||||| |||||||||||  |||| |      
T  4674721 ccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagtttagaatgaa--tttttgtg 4674818  T
Q  100 atctg-acctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    | ||| |||| |||||| || | |||| ||||||||||||||||||||    
T  4674819 aactgaaccttaactcgtcatggcgagtagaggctctcgcctcgcgag 4674866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 27332945 - 27333089
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||||||||||||| |||||||||| |||| |||||||||||||| | ||||||||| ||||||||| ||||| ||||||||| || |||||  |    
T  27332945 ccttagatgcttttgagtggctgaacatgtataatgatgattaggaaagattttagaatgaggttgaacctggaaagattttagaatg-aagttttgtga 27333043  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcga 145  Q
     |   |||||||||||||| | |||| |||||||||||||||||||    
T  27333044 gttgcacctgaactcgccatggcgagtagaggctctcgcctcgcga 27333089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 27393685 - 27393829
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||||||||||||| |||||||||| |||| |||||||||||||| | ||||||||| ||||||||| ||||| ||||||||| || |||||  |    
T  27393685 ccttagatgcttttgagtggctgaacatgtataatgatgattaggaaagattttagaatgaggttgaacctggaaagattttagaatg-aagttttgtga 27393783  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcga 145  Q
     |   |||||||||||||| | |||| |||||||||||||||||||    
T  27393784 gttgcacctgaactcgccatggcgagtagaggctctcgcctcgcga 27393829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 31155059 - 31155137
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagat 79  Q
    ||||||||||||||||||||||||| | ||||||||| |||| ||||||||||||||||||||||||||||| ||||||    
T  31155059 ccttagatgcttttgagtgcctgaataagtctaataacgattgggaaagaatgtagaatgagattgaacctggaaagat 31155137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 328
Target Start/End: Complemental strand, 25644782 - 25644454
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaa-agatttagaatgaaacttttggaa 99  Q
    ||||||||| |||||||||||||  ||||| |||   ||||||||||||| | |||| ||||||||||||||||| || || ||||||  | |||||| |    
T  25644782 ccttagatgtttttgagtgcctgttcatgtataacgttgattaggaaagattttagattgagattgaacctgaaatagtttaagaatg-gatttttggga 25644684  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     |   ||| ||||||||||   |||| |||||| ||||||||||||||  ||| |   |||| ||| |  ||||| ||||||||| | |||||||| |||    
T  25644683 gttacacccgaactcgccatagcgagtagaggccctcgcctcgcgagttgcccggtttcagaatgcttgtttaggtttttgcgatctttgtcgcacgagt 25644584  T
Q  200 tgttaagagttgaaccttggggtag-tattgagacttaatgatgatgttaattataatctgtgaagctg-tttaagttgtgttggtgttgattatgatgt 297  Q
    || | |||||||||||||||||||| |||  ||| |||   ||||| ||||| || ||||||||||||| | || | ||  ||| ||||| || ||||||    
T  25644583 tgctgagagttgaaccttggggtagttataaaga-ttatatatgatattaatgatgatctgtgaagctgatatatgatgatttgatgttgtttttgatgt 25644485  T
Q  298 gatataatgttatacgcattacttgaattat 328  Q
    ||||||||  |||||||||||||||||||||    
T  25644484 gatataattgtatacgcattacttgaattat 25644454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 23019867 - 23019796
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||| | |||| ||||||||||||||    
T  23019867 ccttagatgcttttgagtgcctgaacatgtgtgataatgattaggaaagattttagattgagattgaacctg 23019796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 22334543 - 22334632
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaa 90  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||  |||||||  ||||||||| ||||| ||| | |||||||||||    
T  22334543 ccttagatgcctttgagtgcctgaacatgtctaatattgattaggagtgaatgtaagatgagattggacctggaaatacttagaatgaaa 22334632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 22080398 - 22080543
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct-gaaaagatttagaatgaaacttttggaa 99  Q
    ||||||||| ||||||||| |||||||||||||||||||||||| ||||| |  ||| | ||||||||||| ||| || || |||| | ||||| ||| |    
T  22080398 ccttagatgtttttgagtgactgaacatgtctaataatgattagaaaagattagagattaagattgaacctggaatagtttaagaacg-aacttatggga 22080496  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
     |   |||||||||||||| | |||| ||||||||||||||||||||    
T  22080497 gttatacctgaactcgccatggcgagtagaggctctcgcctcgcgag 22080543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 210 - 279
Target Start/End: Original strand, 5834367 - 5834436
Alignment:
Q  210 tgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgt 279  Q
    |||||||||||||||||||| ||||||||| ||||| |||||||||| ||| |||||||||||| |||||    
T  5834367 tgaaccttggggtagtattgggacttaatggtgatgctaattataatatgtaaagctgtttaagatgtgt 5834436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 210 - 279
Target Start/End: Complemental strand, 20177165 - 20177096
Alignment:
Q  210 tgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgt 279  Q
    |||||||||||||||||||| ||||||||| ||||| |||||||||| ||| |||||||||||| |||||    
T  20177165 tgaaccttggggtagtattgggacttaatggtgatgctaattataatatgtaaagctgtttaagatgtgt 20177096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 210 - 279
Target Start/End: Original strand, 22158826 - 22158895
Alignment:
Q  210 tgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgt 279  Q
    |||||||||||||||||||| ||||||||| ||||| |||||||||| ||| |||||||||||| |||||    
T  22158826 tgaaccttggggtagtattgggacttaatggtgatgctaattataatatgtaaagctgtttaagatgtgt 22158895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 197 - 328
Target Start/End: Original strand, 8227367 - 8227499
Alignment:
Q  197 agttgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctg-tttaagttgtgttggtgttgattatgat 295  Q
    ||||||| ||||||||||||| |||||||  |||   ||||| || || ||||| || ||||||||||||| |||| | ||  ||| ||||| |||| ||    
T  8227367 agttgttgagagttgaaccttagggtagttatgaatattaattataatattaatgatgatctgtgaagctgatttatgatgatttgatgttgtttataat 8227466  T
Q  296 gtgatataatgttatacgcattacttgaattat 328  Q
    ||||||||||  |||| ||||||||||||||||    
T  8227467 gtgatataattgtatatgcattacttgaattat 8227499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 20109673 - 20109605
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    ||||||| || ||||||||||||||||| |||||||||||||| |||  | |||| |||||||||||||    
T  20109673 ttagatgattctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacct 20109605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 281
Target Start/End: Original strand, 15041430 - 15041492
Alignment:
Q  219 gggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttg 281  Q
    |||||||| |||||| ||||||||||||||  || ||||||| |||||||||||| |||||||    
T  15041430 gggtagtaatgagacctaatgatgatgttagatacaatctgtaaagctgtttaagatgtgttg 15041492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 31164531 - 31164589
Alignment:
Q  13 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    ||||||||||||||||  ||| ||||||||||||| |||||||| ||||||||| ||||    
T  31164531 ttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggatgagattggacct 31164589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 18821795 - 18821851
Alignment:
Q  289 ttatgatgtgatataatgttatacgcattacttgaattatgaatgtataattgagatg 346  Q
    ||||||||||||||||||| |||||||||||||||| | | |||| ||||||||||||    
T  18821795 ttatgatgtgatataatgt-atacgcattacttgaagtttaaatgaataattgagatg 18821851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 25641939 - 25641991
Alignment:
Q  94 ttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    |||| |||||| | ||||||||||||| |||||||| ||||||||||||||||    
T  25641939 ttgggaatctggcttgaactcgccacggcgagcagatgctctcgcctcgcgag 25641991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 22331862 - 22331803
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  22331862 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 22331803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 111 - 146
Target Start/End: Complemental strand, 23990253 - 23990218
Alignment:
Q  111 actcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||||||||||||||||| ||||||||||||||||    
T  23990253 actcgccacgacgagcagatgctctcgcctcgcgag 23990218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 1538628 - 1538686
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  1538628 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 1538686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 1544727 - 1544785
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  1544727 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 1544785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 17106246 - 17106180
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||| ||||||||||||||| |||| ||| |||||||||| |||  | |||| |||||||||||    
T  17106246 ttagatgattttgagtgcctgaatatgtataagaatgattaggcaagtttttagactgagattgaac 17106180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 19023907 - 19023837
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctga 73  Q
    ||||||| ||| | ||||||||| |||| |||||||||||||| |||  | |||| |||||||||||||||    
T  19023907 ttagatgatttcgggtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctga 19023837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 324
Target Start/End: Complemental strand, 20076863 - 20076833
Alignment:
Q  294 atgtgatataatgttatacgcattacttgaa 324  Q
    |||||||||||||||||||||||||||||||    
T  20076863 atgtgatataatgttatacgcattacttgaa 20076833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 20224478 - 20224412
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||| |||||||||||||||||||  ||| |||||||||| |||  | |||| |||||||||||    
T  20224478 ttagatgattttgagtgcctgaacatgcataagaatgattaggcaagtttttagattgagattgaac 20224412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 22118462 - 22118396
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||| |||||||||||||||||||  ||| |||||||||| |||  | |||| |||||||||||    
T  22118462 ttagatgattttgagtgcctgaacatgcataagaatgattaggcaagtttttagattgagattgaac 22118396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 25956283 - 25956353
Alignment:
Q  2 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    |||||||  ||||||||||||||||||||||||| | |||| | ||||| | |||| ||||||| ||||||    
T  25956283 cttagatatttttgagtgcctgaacatgtctaattacgattggaaaagattctagattgagatttaacctg 25956353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 33443579 - 33443517
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagatt 65  Q
    ||||||| ||||||||||||||| ||||  ||||||||||||| |||| | |||| |||||||    
T  33443579 ttagatgattttgagtgcctgaatatgtacaataatgattaggcaagattttagattgagatt 33443517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 35008684 - 35008618
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||| |||| ||||||||||||||| ||| |||||||||| |||  | |||| |||||||||||    
T  35008684 ttagatgtttttaagtgcctgaacatgtataagaatgattaggcaagtttttagactgagattgaac 35008618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 15041306 - 15041355
Alignment:
Q  94 ttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgc 143  Q
    |||| |||||||| || |||||||| |||||||||| |||||||||||||    
T  15041306 ttgggaatctgacttgtactcgccatgacgagcagatgctctcgcctcgc 15041355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 16372280 - 16372223
Alignment:
Q  13 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||||||||||||||| |||| ||||||||||| | |||||||| |  ||||||||||    
T  16372280 ttgagtgcctgaacatatctagtaatgattagggatgaatgtaggacaagattgaacc 16372223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 347
Target Start/End: Original strand, 25642126 - 25642191
Alignment:
Q  283 tgttgattatgatgtgatataatg-ttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    |||||| ||||||||||||||||| |||   ||||||||||||||||||||| || ||| ||||||    
T  25642126 tgttgaatatgatgtgatataatgattaattgcattacttgaattatgaatgaatgattaagatgt 25642191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 14099049 - 14099005
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtag 56  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||    
T  14099049 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 14099005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 14472692 - 14472648
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtag 56  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||    
T  14472692 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 14472648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 16741555 - 16741503
Alignment:
Q  94 ttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||||||||| | || |||||||| | |||||||| ||||||||||||||||    
T  16741555 ttggaaatctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 16741503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 16924635 - 16924687
Alignment:
Q  94 ttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    |||||| |||| |||| |||||||| | |||||||| ||||||||||||||||    
T  16924635 ttggaagtctggcctgtactcgccatggcgagcagatgctctcgcctcgcgag 16924687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 16929350 - 16929402
Alignment:
Q  94 ttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    |||||| |||| |||| |||||||| | |||||||| ||||||||||||||||    
T  16929350 ttggaagtctggcctgtactcgccatggcgagcagatgctctcgcctcgcgag 16929402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 18453467 - 18453419
Alignment:
Q  176 ttttgcgatttgtgtcgcacaagttgttaagagttgaaccttggggtag 224  Q
    ||||||||| | ||||||||||| ||||| ||||||| |||||||||||    
T  18453467 ttttgcgatctttgtcgcacaagatgttatgagttgatccttggggtag 18453419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 18955520 - 18955572
Alignment:
Q  94 ttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    |||| |||||| | || |||||||| |||||||||| ||||||||||||||||    
T  18955520 ttgggaatctggcttgtactcgccatgacgagcagatgctctcgcctcgcgag 18955572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 23657177 - 23657229
Alignment:
Q  94 ttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||||| ||| |||| |||||||| | |||||||| ||||||||||||||||    
T  23657177 ttggaaacctggcctgtactcgccatggcgagcagatgctctcgcctcgcgag 23657229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 284; Significance: 1e-159; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 1 - 347
Target Start/End: Complemental strand, 14039109 - 14038762
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattt-agaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||    
T  14039109 ccttagatgcttttgagtgcctgaacatgtctaataatgatttggaaagaatgtagaatgagattgaacctagaaagattttagaatgaaacttttggaa 14039010  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  14039009 atctgaccagaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctgtgtcgcacaagt 14038910  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||| |||||||||||||||||    
T  14038909 tgctaagagttgaaccttggggtagtattgagacttaatgatgatattaattataatctgtgaagctgtttaacatgtgttgatgttgattatgatgtga 14038810  T
Q  300 tataatgttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    |||||||||||  |||||||||||| ||||||||||||||||||||||    
T  14038809 tataatgttatgtgcattacttgaaatatgaatgtataattgagatgt 14038762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 347
Target Start/End: Original strand, 16377183 - 16377530
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| ||||||||||||||| || |||  ||||||||| ||||||| |    
T  16377183 ccttagatgcttttgagcgtctgaacatgtctaataatgattaggaaataatgtaggatgagattgaacctggaatgatcgtagaatgaa-cttttggga 16377281  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |  | ||| |||| |||    
T  16377282 atctgacctgaactcgccacggcgagcagaggctctcgcctcacgagtgacccagaaacatagtgccttgttaggattttgctacctttgttgcacgagt 16377381  T
Q  200 tgt-taagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtg 298  Q
    | | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||| ||||||||||||||||    
T  16377382 tttatgagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtggagctgtttaagatgcgttgatgttgattatgatgtg 16377481  T
Q  299 atataatgttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16377482 atataatgttatacgcattacttgaattatgaatgtataattgagatgt 16377530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 3 - 264
Target Start/End: Complemental strand, 15091355 - 15091093
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattt-agaatgaaacttttggaaat 101  Q
    ||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||    
T  15091355 ttagatgcttttgagtttctgaacatgtctaatattgattaggaaagaatgtagaatgagattgaacctggaaggattttagaatgaaacttttggaaat 15091256  T
Q  102 ctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagttg 201  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||     
T  15091255 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctgtgtcgcacaagttt 15091156  T
Q  202 ttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaag 264  Q
     |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15091155 ctaagagttgaaccttggggtagtattgagacttaatgaagatgttaattataatctgtgaag 15091093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 44053289 - 44052966
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||| ||| ||||||||| ||| |    
T  44053289 ccttagatgcttttgagtgtctgaacatgtctaataatgattgggaaagaatgtaggatgagattgaacctgtaaagattataggatgaaacttgtggga 44053190  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||  | ||| |||| |||    
T  44053189 ttctgacctgaactcgccacggcgagcagagactctcgcctcgcgagtgacccagaaacagagtgccttgttag-attttgcgacctttgttgcacgagt 44053091  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    |||  |||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||||    
T  44053090 tgtcgagagttgaaccttgggatagcattaagacttaatgatgatgttaattataatctgtgaagctgtttaagatgtgctgatgttgattatgatgtga 44052991  T
Q  300 tataatgttatacgcattacttgaa 324  Q
    |||||||||||  ||||||||||||    
T  44052990 tataatgttatgagcattacttgaa 44052966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 22636894 - 22636572
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||| ||| ||||||||||||| ||| |    
T  22636894 ccttagatgcttttgagtgtctgaagatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaaaattgtagaatgaaacttgtggga 22636795  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     |||||| ||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||  | ||| |||| |||    
T  22636794 ttctgacttgacctcgccacggcgagcagaggctctcgcctcacgagtgacccagaaacagagtgtcttgttagg-ttttgcgacctttgttgcacgagt 22636696  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    |||| ||| |||||||||||||||||||| |||||||| || |||||||||||||||||||||||||| ||||| ||||||| ||| |||||||||||||    
T  22636695 tgttgagaattgaaccttggggtagtattaagacttaacgaggatgttaattataatctgtgaagctg-ttaagatgtgttgatgtcgattatgatgtga 22636597  T
Q  300 tataatgttatacgcattacttgaa 324  Q
    |||||||||||| ||||||||||||    
T  22636596 tataatgttatatgcattacttgaa 22636572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 325
Target Start/End: Complemental strand, 12903205 - 12902893
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||          ||||||||||| ||| |     
T  12903205 ccttagatgcttt-gagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaatgaaacttgtgggat 12903117  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||  | ||| |||| || |    
T  12903116 tctgacctgaactcgccacggcgagtagaggctcccgcctcgcgagtgacccagaaacagagtgccttgttag-attttgcgacctttgttgcacgagct 12903018  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||| ||||||||||||| |||||| ||| ||||||||||| || ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  12903017 gttgagagttgaacctttgggtaggattaagacttaatgaagaggttaattataatctgtgaagctgtttaagatgtgttgttgttgattatgatgtgat 12902918  T
Q  301 ataatgttatacgcattacttgaat 325  Q
    |||||||| || |||||||||||||    
T  12902917 ataatgttttatgcattacttgaat 12902893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 1 - 325
Target Start/End: Complemental strand, 7089326 - 7089013
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||          ||||||||||| ||| |     
T  7089326 ccttagatgcctatgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaatgaaacttatgggat 7089237  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||  | ||| |||  ||||    
T  7089236 tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccggaaacagagtgtcttgttag-attttgcgacctttgttgcaagagtt 7089138  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||  ||||||||||||| | |||| ||| ||||||||||| || |||||||||||||||||||| |||||||| ||||||| || | |||||||||||||    
T  7089137 gtcgagagttgaacctttgagtagcattaagacttaatgaagaggttaattataatctgtgaagttgtttaagatgtgttgttgctaattatgatgtgat 7089038  T
Q  301 ataatgttatacgcattacttgaat 325  Q
    |||||||| || |||||||||||||    
T  7089037 ataatgttttatgcattacttgaat 7089013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 3097092 - 3096781
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||          ||||||||||| ||| |     
T  3097092 ccttagatgttttcgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaatgaaacttgtgggat 3097003  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||  | ||| |||| ||||    
T  3097002 tctgacctgaactcgccaaggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgcacgagtt 3096904  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||  ||||||||||||| |||||| ||  | |||||||||||| |||||||||||| |||||||||||||||| ||||||| || ||||||||||| |||    
T  3096903 gtcgagagttgaacctttgggtaggataaatacttaatgatgaggttaattataatatgtgaagctgtttaagatgtgttgttgctgattatgatgagat 3096804  T
Q  301 ataatgttatacgcattacttgaa 324  Q
    | |||||| || ||||||||||||    
T  3096803 acaatgtt-tatgcattacttgaa 3096781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 321
Target Start/End: Original strand, 16239653 - 16239951
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaag-aatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||| |    
T  16239653 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaatgtagaatgagattgaacctggaaagatttagaatgaaacttgtgg-a 16239751  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     ||| ||||||||||||                      |||||||||||||||||||||||||| ||||||||| ||||||||  | ||| |||| |||    
T  16239752 ttctaacctgaactcgc----------------------ctcgcgagtgacccagaaacagagtgacttgttaggtttttgcgacctttgttgcacgagt 16239829  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    |||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||| |||    
T  16239830 tgttgagagttgaactttggggtagtattaagacttaatgatgatgttaattataatctgcgaagctgtttaagatgtgttgatgttgattatgatatga 16239929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 323
Target Start/End: Original strand, 17047745 - 17048055
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||  |||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||           | ||||||||||| ||| |     
T  17047745 ccttagatgtctttgagtgcctgaacatgactaataatgattaggaaaaaatgtaggatgagattgaac-----------tggaatgaaacttgtgggat 17047833  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||| || | |||||||  | ||| |||| ||||    
T  17047834 tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccggaaacagagtgccttgtgag-actttgcgacctttgttgcacgagtt 17047932  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||| ||||||||||||| |||||||||| ||||||||||| ||   |||||| || ||||||||||||||||| ||||||| ||||||||||||||||||    
T  17047933 gttgagagttgaacctttgggtagtattaagacttaatgaagagactaattacaacctgtgaagctgtttaagatgtgttgttgttgattatgatgtgat 17048032  T
Q  301 ataatgttatacgcattacttga 323  Q
    |||||||| || |||||||||||    
T  17048033 ataatgttttatgcattacttga 17048055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 324
Target Start/End: Original strand, 14052974 - 14053285
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||          |||| |||||| ||| |     
T  14052974 ccttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtaggatgagattgaacttg----------gaattaaacttgtgggat 14053063  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||| ||| | ||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||  | ||| |||| ||||    
T  14053064 tctgacctgaactcaccatggcgagcagaggctctcgccttgcgagtgacccagaaacagagtgacttgttag-attttgcgacctttgttgcacgagtt 14053162  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||  ||||||||||| | |||||| ||| ||||||||  |||| ||||||||||||||||||||| || |||| | ||||| ||||||||||||||||||    
T  14053163 gtcgagagttgaacccttgggtaggattaagacttaacaatgaggttaattataatctgtgaagccgtataagatatgttgttgttgattatgatgtgat 14053262  T
Q  301 ataatgttatacgcattacttgaa 324  Q
    |||||||| || ||||||||||||    
T  14053263 ataatgtt-tatgcattacttgaa 14053285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 347
Target Start/End: Original strand, 44928584 - 44928931
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattt-agaatgaaacttttggaa 99  Q
    ||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||    
T  44928584 ccttatatgtttttgagtgcctgaacatatctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaactttgggaa 44928683  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     ||||||| |||||||||| | |||||||||||||||||||||||||||||||||  ||||| ||| |  ||||||||||||||| | |||||||| |||    
T  44928684 -tctgaccagaactcgccatggcgagcagaggctctcgcctcgcgagtgacccagttacagaatgcttgtttaggattttgcgatctttgtcgcacgagt 44928782  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctg-tttaagttgtgttggtgttgattatgatgtg 298  Q
     ||| |||||||||||||| ||||||  |||   |||   || || ||||| || ||||||||||||| |||| | ||  ||  ||||| ||||  ||||    
T  44928783 cgttgagagttgaaccttgtggtagttatgaatattatatataatattaatgatgatctgtgaagctgatttatgatgattttatgttgtttatattgtg 44928882  T
Q  299 atataatgttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    |||||||  |||| ||||||||||||||||   || |||||||||||||    
T  44928883 atataattgtatatgcattacttgaattatatgtgaataattgagatgt 44928931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 84 - 324
Target Start/End: Complemental strand, 7894077 - 7893840
Alignment:
Q  84 aatgaaacttttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcga 183  Q
    |||||||||| ||| | |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| | ||||||||| ||||||||    
T  7894077 aatgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcacgagtgacccagaaacagagagtcttgttaggtttttgcga 7893978  T
Q  184 tttgtgtcgcacaagttgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggt 283  Q
      | ||| |||  |||||   ||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||| |||||   |    
T  7893977 cctttgttgcatgagttgccgagagttgaaccttggggtaatattaagacttaacgatgatgttaattataatctgtgaagctgtttaagatgtgt---t 7893881  T
Q  284 gttgattatgatgtgatataatgttatacgcattacttgaa 324  Q
    | |||||||||||||| |||||| |||  ||||||||||||    
T  7893880 gctgattatgatgtgaaataatggtatgtgcattacttgaa 7893840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 7799157 - 7798975
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| | ||||||| ||||||||||||||| |||| || ||||||||||||| | | |    
T  7799157 ccttagatgcttttgagtgcctgaacatgactaataatgattaggacataatgtaggatgagattgaacctggaaagtttgtagaatgaaacttgtagta 7799058  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcga 183  Q
     |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||    
T  7799057 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacaaagtgtcttgttagg-ttttgcga 7798975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 105 - 323
Target Start/End: Original strand, 23374125 - 23374342
Alignment:
Q  105 acctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagttgtta 204  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||| |  | ||| |||| |||||||     
T  23374125 acctgaactcgccacggcgagcagaggctctcgcctcgcgggtgacccagaaacagagtgacttgttag-attttgcaacctttgttgcacgagttgttg 23374223  T
Q  205 agagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgatataa 304  Q
    ||  || |||||| |||||| ||| ||||||||||| || ||||| |||||||| ||||||| |||||| | ||||| ||||||||||||||||||||||    
T  23374224 aggattaaacctttgggtagcattaagacttaatgaagaggttaactataatctctgaagctttttaagatctgttgttgttgattatgatgtgatataa 23374323  T
Q  305 tgttatacgcattacttga 323  Q
    |||| || |||||||||||    
T  23374324 tgttttatgcattacttga 23374342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 44102669 - 44102446
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattt-agaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||| ||||| |||||||||||| ||| |||||||| ||||||||||||||| | |||||| ||||| |||||||  |||    
T  44102669 ccttagatgcttttgagtgcctgagcatgtttaataatgattatgaa-gaatgtaggatgagattgaacctggatagattttagaataaaactttgagaa 44102571  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     |||||||||||||||||| | |||||||||||||||||||||||||||||| |   ||||| | | |  ||||||||||||||| | ||| |||| |||    
T  44102570 -tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacctatttacagaatacttgtttaggattttgcgatctttgtagcacgagt 44102472  T
Q  200 tgttaagagttgaaccttggggtagt 225  Q
     ||| |||||||||||||||| ||||    
T  44102471 cgttgagagttgaaccttgggatagt 44102446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 16597105 - 16596963
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||| |  ||    
T  16597105 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagacttagaatgaaaatttagagaa 16597006  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcg 144  Q
    ||||||| |||||||||| | |||| ||||| ||||||| ||||    
T  16597005 tctgacc-gaactcgccatggcgagtagaggttctcgccccgcg 16596963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 15552273 - 15552129
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||| ||||||| ||| ||| |  ||    
T  15552273 ccttatatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaaagacttagaatcaaaatttggagaa 15552174  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||||| |||||||||||| ||||||||||||| |||||||||||    
T  15552173 tctgacc-gaactcgccacggcgagcagaggctcgcgcctcgcgag 15552129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 24029201 - 24029057
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||  ||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||| ||||| ||||||||||||||| |  ||    
T  24029201 ccttagatgtctttgagtgcctgaacatgtctaatattgattatgaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggagaa 24029102  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||| |||||||||||| | |||||||||||||||||||||||||    
T  24029101 tctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 24029057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 13812470 - 13812614
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| |||||||| |||||||||||||||| ||||||||||| ||||||| ||||||||||||||| ||||| ||||||||||||||| |  ||    
T  13812470 ccttagatgcctttgagtgtctgaacatgtctaatattgattaggaaataatgtaggatgagattgaacctggaaagacttagaatgaaactttggagaa 13812569  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||| || ||||||||| | |||||||||||||||||||||||||    
T  13812570 tctga-ctaaactcgccatggcgagcagaggctctcgcctcgcgag 13812614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 3 - 146
Target Start/End: Original strand, 22633876 - 22634018
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaatc 102  Q
    ||||||||  |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| |  ||||    
T  22633876 ttagatgcccttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggataatc 22633975  T
Q  103 tgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
     ||  ||||||||||| | |||||||||||||||||||||||||    
T  22633976 aga-ttgaactcgccatggcgagcagaggctctcgcctcgcgag 22634018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 20156951 - 20157182
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||  |||||||||||||||    ||    
T  20156951 ccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaaggcttagaatgaaactttgaagaa 20157050  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaa--acagagtgccttgttaggattt--tgcgatttgtgtcgcaca 196  Q
    | |||| ||||||||||| | || ||||||||||||||||||||||    | || |  |||||||||||||||  | ||   |||||| | ||||||||     
T  20157051 tatgac-tgaactcgccatggcgtgcagaggctctcgcctcgcgagca--ctagtattacagagtgccttgtttaggttaaatgcgatctttgtcgcacg 20157147  T
Q  197 agttgttaagagttgaaccttggggtagtattgag 231  Q
    |||||||| ||||||||||||||| ||||| ||||    
T  20157148 agttgttatgagttgaaccttgggatagtaatgag 20157182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 21815293 - 21815511
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||| ||| |||||||| | |||||||| |   ||| |||||| ||||||| | ||    
T  21815293 ccttagatgcttttgagtgtctgaacatgtttaataatgattaggaaataatttagaatgataatgaacctggattaattaagaatg-aactttttggaa 21815391  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttg-ttaggattttgcgatttgtgtcgcacaagt 199  Q
     ||||||||||||||||| | |||| |||||||||||||||||||||  ||||   |||||  |||||| ||||||||||||||| |   |||||| |||    
T  21815392 gctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagttgcccaattacaga-agccttgtttaggattttgcgatcttcatcgcacgagt 21815490  T
Q  200 tgttaagagttgaaccttggg 220  Q
     ||| ||||||||||||||||    
T  21815491 cgttgagagttgaaccttggg 21815511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 3 - 328
Target Start/End: Original strand, 52242856 - 52243182
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaa-agatttagaatgaaacttttggaaat 101  Q
    ||||||| ||| |||||||||||||||| |||||||||| |||||||| | ||||||||||||||||||| || || || |||||| |  | |||| | |    
T  52242856 ttagatgatttcgagtgcctgaacatgtataataatgatcaggaaagattctagaatgagattgaacctggaatagtttaagaatgcat-tgttgggagt 52242954  T
Q  102 ctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagttg 201  Q
       ||||||||||||||   |||| |||||||||||||||||||||  |||||  ||||| ||| |  ||||||||||||||| | |||||||| ||| |    
T  52242955 tacacctgaactcgccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaatgcttgtttaggattttgcgatctttgtcgcacgagtcg 52243054  T
Q  202 ttaagagttgaaccttggggtagtattg-agacttaatgatgatgttaattataatctgtgaagctgtt-taagttgtgttggtgttgattatgatgtga 299  Q
    | ||||||||||| ||||||||||| || ||| |  || | ||| ||||| || ||||||||||||||| |||| ||  ||| ||||| |||| ||||||    
T  52243055 taaagagttgaactttggggtagtaatgaagattgtat-aagatattaatgatgatctgtgaagctgttataagatgatttgatgttgtttataatgtga 52243153  T
Q  300 tataatgttatacgcattacttgaattat 328  Q
    ||||||  |||| |||||||||| |||||    
T  52243154 tataattgtatatgcattacttggattat 52243182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 3 - 232
Target Start/End: Original strand, 15464592 - 15464822
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaa-agatttagaatgaaacttttggaaat 101  Q
    ||||||| ||||||||||||||| |||| ||||||||||||||||||| | |||| ||||||||||||||||| || || |||||| |  ||||||   |    
T  15464592 ttagatgattttgagtgcctgaatatgtataataatgattaggaaagattttagattgagattgaacctgaaatagtttaagaatggat-ttttgggtgt 15464690  T
Q  102 ctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtt-aggattttgcgatttgtgtcgcacaagtt 200  Q
       |||||||||| |||   |||| |||||||||||||||||||||  |||||  ||||| || |||||| |||||||||| || | |||||||||||||    
T  15464691 tacacctgaactcaccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaatgacttgtttaggattttgcaatctttgtcgcacaagtt 15464790  T
Q  201 gttaagagttgaaccttggggtagtattgaga 232  Q
    |||| |||||||||||||| |||||| |||||    
T  15464791 gttatgagttgaaccttggagtagtaatgaga 15464822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 6190893 - 6190783
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||| ||||||| ||||||||||||| ||| |    
T  6190893 ccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtggga 6190794  T
Q  100 atctgacctga 110  Q
     | ||||||||    
T  6190793 ttttgacctga 6190783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 21814964 - 21815109
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||| | |||||||| |   ||| |||||| ||||||| | ||    
T  21814964 ccttagatgcttttgagtgtctgaacatgtttaataatgattaggaaagaatttagaatgataatgaacctggattaattaagaatg-aactttttggaa 21815062  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
     ||||| ||||||||||| | |||| |||||||||||||||||||||    
T  21815063 gctgacttgaactcgccatggcgagtagaggctctcgcctcgcgagt 21815109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 21818386 - 21818531
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||| | |||||||| |   ||| |||||| ||||||| | ||    
T  21818386 ccttagatgcttttgagtgtctgaacatgtttaataatgattaggaaagaatttagaatgataatgaacctggattaattaagaatg-aactttttggaa 21818484  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
     ||||| ||||||||||| | |||| |||||||||||||||||||||    
T  21818485 gctgacttgaactcgccatggcgagtagaggctctcgcctcgcgagt 21818531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 2 - 146
Target Start/End: Complemental strand, 8846834 - 8846689
Alignment:
Q  2 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaaa 100  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||| |||||||||||  |||||  |     
T  8846834 cttagatgtttttgagtacctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatgaattttttgtgag 8846735  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    |   |||| ||||||||| | |||| ||||||||||||||||||||    
T  8846734 ttgcaccttaactcgccatggcgagtagaggctctcgcctcgcgag 8846689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 12774458 - 12774313
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||| | |||  ||||||||||  |||||  |    
T  12774458 ccttagatgtttttgagtgcctgaacatgtctaataatgattagaaaagattggagaatgagattgaacctggagagacgttagaatgaa--ttttgtga 12774361  T
Q  100 atctg-acctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
    | ||| |||||||||||||| | ||||||||||||||||||||||||||    
T  12774360 a-ctgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 12774313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 244 - 324
Target Start/End: Original strand, 16270140 - 16270220
Alignment:
Q  244 tgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgatataatgttatacgcattacttgaa 324  Q
    |||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||  ||||||||||||    
T  16270140 tgttgattataatctgtgaagctgtttaagatgtgttgatgttgattatgatgtgatataatgttatgtgcattacttgaa 16270220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 59 - 146
Target Start/End: Complemental strand, 3332287 - 3332201
Alignment:
Q  59 tgagattgaacctgaaaagatttagaatgaaacttttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    |||||||||||||| ||||| ||||||||||||||| |  |||||||| ||||||||||| | |||||||||||||||||||||||||    
T  3332287 tgagattgaacctggaaagacttagaatgaaactttggagaatctgac-tgaactcgccatggcgagcagaggctctcgcctcgcgag 3332201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 39705949 - 39706020
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| || ||| | ||||||||||||    
T  39705949 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattgaagattaagattgaacctg 39706020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 15099810 - 15099665
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct-gaaaagatttagaatgaaacttttggaa 99  Q
    ||||||||| |||||||||||||||| ||| | || |||||||||||||| |||||| ||||||||||||| ||| || || |||||| || |||||  |    
T  15099810 ccttagatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacctggaatagtttaagaatg-aatttttgtga 15099712  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
     |   |||||||||||||| | |||| ||||||||||||||||||||    
T  15099711 gttgcacctgaactcgccatggcgagtagaggctctcgcctcgcgag 15099665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 43198249 - 43198317
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||    
T  43198249 ccttagatgtttttgagtgcctgaacatgtgtaataatgattaggaaagattttagattgagattgaac 43198317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 346
Target Start/End: Complemental strand, 6190782 - 6190578
Alignment:
Q  140 tcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagttgttaagagttgaaccttggggtagtattgagacttaatg 239  Q
    |||||||||||||| ||| |||||| |||||||| |||||||||  | ||| |||| || |||  ||||||||||||||| |||| ||| |||||| |      
T  6190782 tcgcgagtgacccaaaaatagagtgacttgttag-attttgcgacctttgttgcacgagctgtcgagagttgaaccttggcgtagcattaagacttgaat 6190684  T
Q  240 atgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgat-tatgatgtgatataatgttatacgcattacttgaattatgaatgtataa 338  Q
    ||||| ||||||| |||  ||||||||| ||| |   ||||  ||||||| ||||||||||| ||||| ||||||||||||||||| | | |||| ||||    
T  6190683 atgatattaattacaattcgtgaagctg-ttatgagatgttaatgttgatgtatgatgtgatctaatg-tatacgcattacttgaagtttaaatgaataa 6190586  T
Q  339 ttgagatg 346  Q
    ||||||||    
T  6190585 ttgagatg 6190578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 17046765 - 17046721
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtag 56  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  17046765 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtag 17046721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 15868296 - 15868367
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| ||||||||||||||| |||| ||||||||||||||||||  | |||| ||||||||||||||    
T  15868296 ccttagatgattttgagtgcctgaatatgtataataatgattaggaaagtttttagattgagattgaacctg 15868367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 15190777 - 15190706
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| ||||||||||||||||||||||||| |||||||| ||||  | |||| ||||||| ||||||    
T  15190777 ccttagatgtttttgagtgcctgaacatgtctaattatgattagaaaaggttctagattgagatttaacctg 15190706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 308
Target Start/End: Complemental strand, 17046724 - 17046637
Alignment:
Q  221 gtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgatataatgtt 308  Q
    |||| ||| ||||||||| || | |||||||||||||||||||||||  |||| | ||||| ||||||||| |||||| |||||||||    
T  17046724 gtaggattaagacttaataataaggttaattataatctgtgaagctgaataagatatgttgttgttgattaagatgtgttataatgtt 17046637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 13436 - 13505
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| ||||||||||||||||| || |||||||||||||| |||  | |||| ||||||||||||||    
T  13436 ttagatgattttgagtgcctgaacaagtataataatgattaggcaagtttttagattgagattgaacctg 13505  T

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Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 14685593 - 14685534
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| || |||||||||||    
T  14685593 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggataagattgaacct 14685534  T

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Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 13844999 - 13844950
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaga 50  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||| |||||    
T  13844999 ccttagatgtttttgagtgtctgaacatgtctaattatgattagaaaaga 13844950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 297
Target Start/End: Complemental strand, 14280518 - 14280466
Alignment:
Q  246 ttaattataatctgtgaagctgttt-aagttgtgttggtgttgattatgatgt 297  Q
    ||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||    
T  14280518 ttaatgataatctgtgaagctgttttaagatgtgttgatgttgattatgatgt 14280466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 14679389 - 14679325
Alignment:
Q  7 atgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||| |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  14679389 atgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 14679325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 297
Target Start/End: Original strand, 54798669 - 54798721
Alignment:
Q  246 ttaattataatctgtgaagctgttt-aagttgtgttggtgttgattatgatgt 297  Q
    ||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||    
T  54798669 ttaatgataatctgtgaagctgttttaagatgtgttgatgttgattatgatgt 54798721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 12287794 - 12287865
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| || | |||| |||||||||| |||||||||||||| |||  | |||| ||||||||||||||    
T  12287794 ccttagatgtttctaagtgtctgaacatgtataataatgattaggcaagtttttagattgagattgaacctg 12287865  T

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Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 23838855 - 23838796
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  23838855 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 23838796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 32851911 - 32851868
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattag 44  Q
    ||||||||| ||||||||||||||| |||| |||||||||||||    
T  32851911 ccttagatgattttgagtgcctgaatatgtataataatgattag 32851868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 386038 - 386096
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  386038 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 386096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 7900855 - 7900913
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  7900855 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 7900913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 15321778 - 15321836
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  15321778 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 15321836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 17333815 - 17333749
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||| ||||||||||||||| ||||  ||||||||||||| |||  | |||| |||||||||||    
T  17333815 ttagatgattttgagtgcctgaatatgtacaataatgattaggcaagtttttagattgagattgaac 17333749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 32306582 - 32306624
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 45  Q
    ||||||| |||||||||||| ||||||| ||||||||||||||    
T  32306582 ttagatggttttgagtgcctaaacatgtataataatgattagg 32306624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 40471907 - 40471837
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||| |||||||| || |||||||||||    
T  40471907 ccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacct 40471837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 51493502 - 51493560
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  51493502 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 51493560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 40478580 - 40478511
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  40478580 ccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 40478511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 53081760 - 53081829
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| || ||||||||| ||||||| |||||||||||| | |||  | |||| ||||||||||||||    
T  53081760 ttagatgattctgagtgcctaaacatgtataataatgattaagcaagtttttagattgagattgaacctg 53081829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 8574844 - 8574876
Alignment:
Q  315 attacttgaattatgaatgtataattgagatgt 347  Q
    ||||||||||||||||||||||| |||||||||    
T  8574844 attacttgaattatgaatgtatatttgagatgt 8574876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 16956334 - 16956378
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtag 56  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||    
T  16956334 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 16956378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 24029022 - 24028970
Alignment:
Q  179 tgcgatttgtgtcgcacaagttgttaagagttgaaccttggggtagtattgag 231  Q
    |||||| | |||||||| |||||||| ||||||||||||||| ||||| ||||    
T  24029022 tgcgatctttgtcgcacgagttgttatgagttgaaccttgggatagtaatgag 24028970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 46640043 - 46640111
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    ||||||| || |||||||||||||||||  ||||||||||||| |||  | |||| ||||||| |||||    
T  46640043 ttagatgattctgagtgcctgaacatgtaaaataatgattaggcaagtttttagattgagattaaacct 46640111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 54798729 - 54798761
Alignment:
Q  315 attacttgaattatgaatgtataattgagatgt 347  Q
    ||||||||||||||||||||||| |||||||||    
T  54798729 attacttgaattatgaatgtatatttgagatgt 54798761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 282; Significance: 1e-158; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 2 - 347
Target Start/End: Original strand, 50209875 - 50210220
Alignment:
Q  2 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaat 101  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |    
T  50209875 cttatatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagatttagaatgaaacttttggaatt 50209974  T
Q  102 ctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagttg 201  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||| |||| |||||    
T  50209975 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagttg 50210074  T
Q  202 ttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgata 301  Q
    || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  50210075 ttgagagttgaacctttgggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagatgtgttgatgttgattatgatgtgata 50210174  T
Q  302 taatgttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||    
T  50210175 taatgttaaacgcattacttgaattatgaatgtatacttgagatgt 50210220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 2 - 347
Target Start/End: Complemental strand, 34510239 - 34509894
Alignment:
Q  2 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||| ||||||||||    
T  34510239 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaa-cttttggaaa 34510141  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| | ||||||| ||||||||  | ||| |||| ||||    
T  34510140 tctgacctgaactcgccacggcgagcagaggctctcgcctcacgagtgacccagaaacagagtgtcatgttaggtttttgcgacctttgttgcacgagtt 34510041  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||| |||||||||||    
T  34510040 gttgagggttgaaccttggggtagtattgagacttaatgatgatgttaattataatctttgaagctgtttaagatgtgttgatgttgaatatgatgtgat 34509941  T
Q  301 ataatgttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    ||||||||||| |||||||||||  ||||||||||||||| ||||||    
T  34509940 ataatgttataagcattacttgagatatgaatgtataattaagatgt 34509894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 347
Target Start/End: Complemental strand, 22532729 - 22532383
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||| ||||||||| |||||||||    
T  22532729 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaggattgtagaatgaa-cttttggaa 22532631  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
    ||||||| |||||||||||||  ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||  | ||| |||| ||     
T  22532630 atctgacttgaactcgccacggtgagcagaggctctcgcctcgcgagtgacccaaaaacagagtgacttgttaggattttgcgacctttgttgcacgagc 22532531  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||| |||| | ||||||||||||||||| ||||||| |||||||||||||||||    
T  22532530 tgttgagagttgaaccttgaggtagtattgagacttaatgatgatgttatttatgaactgtgaagctgtttaagatgtgttgatgttgattatgatgtga 22532431  T
Q  300 tataatgttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    |||||||||||  ||||||||||||||||||||| ||| || ||||||    
T  22532430 tataatgttatgtgcattacttgaattatgaatgaatatttaagatgt 22532383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 324
Target Start/End: Original strand, 22354233 - 22354556
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    ||||| |||||||||||||| ||||||||||| ||||||||||||||| || |||| ||||||||||||||| | ||||| ||||||||||||| ||| |    
T  22354233 ccttatatgcttttgagtgcttgaacatgtcttataatgattaggaaataacgtaggatgagattgaacctggatagattgtagaatgaaacttgtggga 22354332  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     |||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||  | ||| |||| |||    
T  22354333 ttctgacctgaactcgccacggcgagtagaggctctcgcctcgcaagtgacccagaaacagagtgacttgttagg-ttttgcgacctttgttgcacgagt 22354431  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    |||| ||| |||||||||  ||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  22354432 tgttgagaattgaacctttaggtagtattaagacttaatgaggatgttaattataatctgtgaagctgtttaagatgtgttgatgttgattatgatgtga 22354531  T
Q  300 tataatgttatacgcattacttgaa 324  Q
    ||||||||||||  |||||||||||    
T  22354532 tataatgttatatacattacttgaa 22354556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 20135647 - 20135324
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaac-ttttggaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||| |||||||||||| ||||||||    
T  20135647 ccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaaagacttagaatgaaacattttggaa 20135548  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     ||||||| |||||||||| | |||||||| |||||| |||||||||| |||||||||||||||| ||||||||| || |||||  | ||| | || |||    
T  20135547 ttctgacc-gaactcgccatggcgagcagaagctctcacctcgcgagtaacccagaaacagagtgacttgttaggtttatgcgacctttgttgtacgagt 20135449  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    |||| ||||||||||||| |||||||| | |||| |||||||| |||||||||||||||||||||||||||||| ||||||| |||| |||||||| |||    
T  20135448 tgttgagagttgaaccttagggtagtagtaagacctaatgatgttgttaattataatctgtgaagctgtttaagatgtgttgatgttcattatgatatga 20135349  T
Q  300 tataatgttatacgcattacttgaa 324  Q
    ||||||||| || ||||||||||||    
T  20135348 tataatgttgtatgcattacttgaa 20135324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 1 - 325
Target Start/End: Original strand, 27250401 - 27250714
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||          ||||||||| | ||| |     
T  27250401 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgggattgaacctg----------gaatgaaacctgtgggat 27250490  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||  |||||||||  | ||| |||| ||||    
T  27250491 tctgacctgaactcgccacgtcgagcagaggctctcgcctcgcgagtgacacagaaacagagtcccttgttat-attttgcgacctttgttgcacgagtt 27250589  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||  ||||||||||||| |||||| ||||| ||||||||| || ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  27250590 gtcgagagttgaacctttgggtagcattgatacttaatgaagaggttaattataatctgtgaagctgtttaagatgtgttgttgttgattatgatgtgat 27250689  T
Q  301 ataatgttatacgcattacttgaat 325  Q
    |||||||| || |||||||||||||    
T  27250690 ataatgttttatgcattacttgaat 27250714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 323
Target Start/End: Complemental strand, 21027129 - 21026818
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||          ||||||||||| ||        
T  21027129 ccttagatgcttttgagtgcttgaacatgtctaataatgattaggtaagaatgtaggatgagattgaacctg----------gaatgaaacttgtgaggt 21027040  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||  | ||| |||| ||||    
T  21027039 tctgacctaaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacaaagtgacttgttag-attttgcgacctttgttgcacgagtt 21026941  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||| ||  || |||||| |||||| ||| ||||||||||| || ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  21026940 gttgaggattaaacctttgggtagcattaagacttaatgaagaggttaattataatctgtgaagctgtttaagatgtgttgctgttgattatgatgtgat 21026841  T
Q  301 ataatgttatacgcattacttga 323  Q
    |||||||| || |||||||||||    
T  21026840 ataatgttttatgcattacttga 21026818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 324
Target Start/End: Original strand, 22355846 - 22356159
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||          |||||||| || ||| |     
T  22355846 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaatgaaatttgtgggat 22355935  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgcc-ttgttaggattttgcgatttgtgtcgcacaagt 199  Q
    |||||||||||||||||||| |||||||||||| |||| |||||||||||| |||||||||||| | ||||||| |||||| ||  | ||| |||| |||    
T  22355936 tctgacctgaactcgccacggcgagcagaggct-tcgcatcgcgagtgacctagaaacagagtgacattgttag-attttgagacctttgttgcacgagt 22356033  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtg-ttgattatgatgtg 298  Q
    |||  |||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||| || ||||||||||||||    
T  22356034 tgtcgagagttgaaccttgggatagcattaagacttaatgatgatgttaattataatctgtgaagctatttaagatgtgttgatgattgattatgatgtg 22356133  T
Q  299 atataatgttatacgcattacttgaa 324  Q
    ||||||||||||  ||||||||||||    
T  22356134 atataatgttatgtgcattacttgaa 22356159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 324
Target Start/End: Original strand, 22357532 - 22357845
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||          |||||||| || ||| |     
T  22357532 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaatgaaatttgtgggat 22357621  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgcc-ttgttaggattttgcgatttgtgtcgcacaagt 199  Q
    |||||||||||||||||||| |||||||||||| |||| |||||||||||| |||||||||||| | ||||||| |||||| ||  | ||| |||| |||    
T  22357622 tctgacctgaactcgccacggcgagcagaggct-tcgcatcgcgagtgacctagaaacagagtgacattgttag-attttgagacctttgttgcacgagt 22357719  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtg-ttgattatgatgtg 298  Q
    |||  |||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||| || ||||||||||||||    
T  22357720 tgtcgagagttgaaccttgggatagcattaagacttaatgatgatgttaattataatctgtgaagctatttaagatgtgttgatgattgattatgatgtg 22357819  T
Q  299 atataatgttatacgcattacttgaa 324  Q
    ||||||||||||  ||||||||||||    
T  22357820 atataatgttatgtgcattacttgaa 22357845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 433467 - 433244
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||| |    
T  433467 ccttagatgcttttgagtgtctgaacatgtctattaatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaac-tttggga 433369  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||||||   || | ||| |  ||||||||||||||| | |||||||| |||    
T  433368 atctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccagttgcaaaatgcttgtttaggattttgcgatctttgtcgcacgagt 433269  T
Q  200 tgttaagagttgaaccttggggtag 224  Q
     ||| ||||||||||||||||||||    
T  433268 cgttgagagttgaaccttggggtag 433244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 272
Target Start/End: Original strand, 20846891 - 20847151
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||          ||||||||||| ||        
T  20846891 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggtaagaatgtaggatgagattgaacctg----------gaatgaaacttgtgaggt 20846980  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    | |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||  | ||| |||| ||||    
T  20846981 tttgacctgaactcgccacggcgagcagaggctcttgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgcacgagtt 20847079  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaa 272  Q
    ||| ||  || |||||| |||||| ||| ||||||||||| || |||||  ||||||| |||||||||||||    
T  20847080 gttgaggattaaacctttgggtagcattaagacttaatgaagaggttaaccataatctatgaagctgtttaa 20847151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 3 - 324
Target Start/End: Original strand, 38801065 - 38801374
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaatc 102  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||          ||||  ||||| ||| | ||    
T  38801065 ttagatgtctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgtgattgaacctg----------gaattgaacttgtgggattc 38801154  T
Q  103 tgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagttgt 202  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||  | ||| | || ||||||    
T  38801155 tgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacctagaaacagagtgacttgtta-gattttgcgacctttgttgtacgagttgt 38801253  T
Q  203 taagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgatat 302  Q
        ||||||||| | |||||| ||| ||||||||| ||||  |||| |||||| ||||||||||  |||| | ||||| ||||||||| |||||| |||    
T  38801254 cggaagttgaacccttgggtaggattaagacttaataatgagattaactataatttgtgaagctgaataagatatgttgttgttgattacgatgtgttat 38801353  T
Q  303 aatgttatacgcattacttgaa 324  Q
    |||||| || ||||||||||||    
T  38801354 aatgtt-tatgcattacttgaa 38801374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 20919061 - 20918917
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  || ||| |  ||    
T  20919061 ccttacatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatttaaatttggagaa 20918962  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||| |||||||||||| | |||||||||||||||||||||||||    
T  20918961 tctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 20918917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 33681469 - 33681301
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||| |||||||| |||||| |||||||||||||||||||||||| || |||||||||||||||||| ||||| ||||||||| || |||||  |    
T  33681469 ccttagatgtttttgagttcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatg-aatttttgtga 33681371  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttg 169  Q
     |   |||||||||||||| | |||||||||||||||||||||||| | ||||||  |||||||||||||    
T  33681370 gttgcacctgaactcgccatggcgagcagaggctctcgcctcgcgaattacccagttacagagtgccttg 33681301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 21754495 - 21754350
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||  |||| |||||||||||  |||||  |    
T  21754495 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaaagagattgaacctgggaagactttagaatgaa--ttttgtga 21754398  T
Q  100 atctg-acctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
    | ||| |||||||||||||| | ||||||||||||||||||||||||||    
T  21754397 a-ctgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 21754350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 20091135 - 20091281
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaac-ttttggaa 99  Q
    |||||||||| ||||| ||||||||||||||||||| |||||||||  |||||||  ||||||||| ||||||||||| ||||||||||||   |||| |    
T  20091135 ccttagatgcctttgattgcctgaacatgtctaatattgattaggagtgaatgtaagatgagattggacctgaaaagacttagaatgaaacaacttggga 20091234  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
     |||||||||||||||||| | |||||||| | |||| |||||||||    
T  20091235 ttctgacctgaactcgccatggcgagcagatgttctcacctcgcgag 20091281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 52927642 - 52927815
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||| ||||| ||| ||||| || ||||  ||    
T  52927642 ccttagatgtttttgagtgcctgaacatgtctaataatgattatgaaagattggagaatgagattgaacctggaaagattttggaatg-aattttttaaa 52927740  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttagg 174  Q
     |  ||||||||||||||| | |||| |||||| |||||||||||| |   ||||  ||||| ||||||||||||    
T  52927741 gttagacctgaactcgccatggcgagtagaggccctcgcctcgcgaattgaccagttacagaatgccttgttagg 52927815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 245 - 323
Target Start/End: Complemental strand, 48603730 - 48603652
Alignment:
Q  245 gttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgatataatgttatacgcattacttga 323  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| || |||||||||||    
T  48603730 gttaattataatctgtgaagctgtttaagatgtgttgttgttgattatgatgtgatataatgttttatgcattacttga 48603652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 4 - 146
Target Start/End: Complemental strand, 20248734 - 20248592
Alignment:
Q  4 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaaatc 102  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||| | ||| |||||||||||  |||| |  | |    
T  20248734 tagatgtttttgagtgcctgaacatgtctaataatgattaggaaagatcggagaatgagattgaacctggagagactttagaatgaa--tttttgtgaac 20248637  T
Q  103 tg-acctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    || |||||||||||||| | |||| ||||||| ||||||||||||    
T  20248636 tgaacctgaactcgccatggcgagtagaggctatcgcctcgcgag 20248592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 22921528 - 22921597
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||    
T  22921528 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaacc 22921597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 22238089 - 22238009
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattt 81  Q
    ||||||||  ||||||||||||||||||||||||||||| |||||||||| || ||||||||||| |||||| ||||||||    
T  22238089 ccttagatatttttgagtgcctgaacatgtctaataatggttaggaaagattggagaatgagattaaacctggaaagattt 22238009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 170 - 328
Target Start/End: Complemental strand, 16758942 - 16758783
Alignment:
Q  170 ttaggattttgcgatttgtgtcgcacaagttgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtt 269  Q
    ||||||||||||||| | |||||||| ||||||| |||||||||||||||||| ||| |||   ||  | ||||| ||||| || |||||||||||||||    
T  16758942 ttaggattttgcgatctttgtcgcacgagttgttgagagttgaaccttggggtcgtaatgaagattgtttatgatattaatgatgatctgtgaagctgtt 16758843  T
Q  270 -taagttgtgttggtgttgattatgatgtgatataatgttatacgcattacttgaattat 328  Q
     |||  ||  ||| ||||| |||| ||||||||||||  |||| ||||||||||||||||    
T  16758842 ataatatgatttgttgttgtttataatgtgatataattgtatatgcattacttgaattat 16758783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 21162188 - 21162117
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||| ||||||||||||||||||| | ||||||||| |||| |||||||||||||||||||||||||||||    
T  21162188 ccttaaatgcttttgagtgcctgaataagtctaataacgattgggaaagaatgtagaatgagattgaacctg 21162117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 178 - 323
Target Start/End: Original strand, 22468535 - 22468679
Alignment:
Q  178 ttgcgatttgtgtcgcacaagttgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgt 277  Q
    ||||||| ||||||||| || | | | |||| || ||| | ||||||||||||||| |  ||| | || ||||||||||||||||||||||||||| |||    
T  22468535 ttgcgatatgtgtcgcataattcgattagagatggacccttgggtagtattgagaccttttgaagttggtaattataatctgtgaagctgtttaagatgt 22468634  T
Q  278 gttggtgttgattatgatgtgatataatgttatacgcattacttga 323  Q
    | || || | |||||||||||||||||||||||  |||||||||||    
T  22468635 gctgatg-taattatgatgtgatataatgttatgtgcattacttga 22468679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 21301199 - 21301245
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaa 47  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  21301199 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaa 21301245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 28194109 - 28194254
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaa-agatttagaatgaaacttttggaa 99  Q
    |||| |||| |||||||||||||||| ||| | || |||||||||||||| |||||| ||||||||||||||||| || || |||||||| | ||||  |    
T  28194109 ccttggatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacctgaaatagtttaagaatgaatc-tttgtga 28194207  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
     |   |||||||||||||| | | || ||||||||||||||||||||    
T  28194208 gttgcacctgaactcgccatggcaagtagaggctctcgcctcgcgag 28194254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 347
Target Start/End: Original strand, 35260861 - 35261088
Alignment:
Q  122 cgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttg-ttaggattttgcgatttgtgtcgcacaagttgttaagagttgaaccttggg 220  Q
    |||| |||||| ||||||||||||||  |||||  ||| | | ||||| ||||||||||||||| | |||||||| || ||||| ||||||||| |||||    
T  35260861 cgagtagaggccctcgcctcgcgagtttcccagttacaaaataccttgcttaggattttgcgatctttgtcgcacgagatgttatgagttgaacattggg 35260960  T
Q  221 gtagt-attgagacttaatgatgatgttaattataatctgtgaagctgtt-taagttgtgttggtgttgattatgatgtgatataatgttatacgcatta 318  Q
    ||||| || |||| |  || ||||| ||||  ||||| ||||||| |||| |||| ||  ||| ||||| | || ||||||| ||||  |||| ||||||    
T  35260961 gtagtaatggagattgtat-atgatattaacgataatatgtgaagttgttataagatgatttgatgttgttaataatgtgatgtaattgtatatgcatta 35261059  T
Q  319 cttgaattatgaatgtataattgagatgt 347  Q
    ||||||||||| ||| ||  |||||||||    
T  35261060 cttgaattatgtatgaatgtttgagatgt 35261088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 224
Target Start/End: Complemental strand, 26065295 - 26065176
Alignment:
Q  106 cctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttg-ttaggattttgcgatttgtgtcgcacaagttgtta 204  Q
    |||||||||||||   |||| |||||||||||||||||||||  |||||  ||||| | ||||| ||||| ||||||||| | |||||||| || |||||    
T  26065295 cctgaactcgccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaataccttgtttagggttttgcgatctttgtcgcacgagatgtta 26065196  T
Q  205 agagttgaaccttggggtag 224  Q
     ||||| | |||||||||||    
T  26065195 tgagtttatccttggggtag 26065176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 43697820 - 43697749
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| ||||||||||||||||||||||| | |||||||| ||||| | |||| ||||||| ||||||    
T  43697820 ccttagatgtttttgagtgcctgaacatgtctatttatgattagaaaagattctagattgagatttaacctg 43697749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 35260718 - 35260788
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctga 73  Q
    ||||||| || ||||||||||||||||| |||||||||||||| |||  | |||| |||||||||||||||    
T  35260718 ttagatgattctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctga 35260788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 35981352 - 35981418
Alignment:
Q  6 gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    |||| |||||||||||||||| ||| | || |||||||||||||| |||||| ||||||||||||||    
T  35981352 gatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacctg 35981418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 21895895 - 21895964
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| || |||||||||||||| || ||||||||||||||||||  | |||| ||||||||||||||    
T  21895895 ttagatgattatgagtgcctgaacaagtataataatgattaggaaagtttttagattgagattgaacctg 21895964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 16759186 - 16759114
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctga 73  Q
    ||||||||| |||||||||||| |||| || |||||||||||||| |||  | |||| |||||||||||||||    
T  16759186 ccttagatgtttttgagtgcctaaacacgtataataatgattaggcaagtttttagattgagattgaacctga 16759114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 347
Target Start/End: Complemental strand, 21714732 - 21714661
Alignment:
Q  277 tgttggtgttgattatgatgtgatataatgttatac-gcattacttgaattatgaatgtataattgagatgt 347  Q
    |||| ||||||| |||||||||||||||||||  |  ||||||||||||||||||||| || ||||||||||    
T  21714732 tgttagtgttgaatatgatgtgatataatgtttaattgcattacttgaattatgaatgaatgattgagatgt 21714661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 41049629 - 41049700
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| || ||||||||||||||||| |||||||| ||||| |||  | |||| ||||||||||||||    
T  41049629 ccttagatgtttctgagtgcctgaacatgtataataatggttaggcaagtttttagattgagattgaacctg 41049700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 16381698 - 16381632
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||| ||||||||||||| |||||| ||| ||||||||||||||  | |||||||| |||||||    
T  16381698 ttagatggttttgagtgcctggacatgtataagaatgattaggaaagtttttagaatgaaattgaac 16381632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 26065441 - 26065383
Alignment:
Q  14 tgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||||||||||| |||||||||||||| |||  | |||| ||||||||||||||    
T  26065441 tgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctg 26065383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 16367873 - 16367942
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| ||||||||||||||| |||| |||||||||||||| |||  | |||| ||||| ||||||||    
T  16367873 ttagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagaatgaacctg 16367942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 105 - 170
Target Start/End: Complemental strand, 21162121 - 21162056
Alignment:
Q  105 acctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgt 170  Q
    ||||| |||||||| | |||||||||||||||||||||||||  |||| ||| |||| ||||||||    
T  21162121 acctgtactcgccatggcgagcagaggctctcgcctcgcgagcaaccctgaaccagaatgccttgt 21162056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 21861157 - 21861226
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| || |||||||||||||| || |||||||||||||| |||  | |||| ||||||||||||||    
T  21861157 ttagatgattctgagtgcctgaacaagtataataatgattaggcaagtttttagattgagattgaacctg 21861226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 20524899 - 20524958
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  20524899 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 20524958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 21342608 - 21342537
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| ||||||||| ||||| |||| |||||||||||||| |||  | |||| ||||| ||||||||    
T  21342608 ccttagatgattttgagtgtctgaatatgtataataatgattaggcaagtttttagattgagaatgaacctg 21342537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 21347473 - 21347402
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| ||||||||| ||||| |||| |||||||||||||| |||  | |||| ||||| ||||||||    
T  21347473 ccttagatgattttgagtgtctgaatatgtataataatgattaggcaagtttttagattgagaatgaacctg 21347402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 21438216 - 21438157
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  21438216 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 21438157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 23763633 - 23763574
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  23763633 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 23763574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 19063942 - 19063884
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  ||||||||||    
T  19063942 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacc 19063884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 19111832 - 19111774
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  ||||||||||    
T  19111832 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacc 19111774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 27652808 - 27652874
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||| ||||||||||||||| |||  |||||||||||||| |||  | |||| |||||||||||    
T  27652808 ttagatgtttttgagtgcctgaatatgcataataatgattaggcaagtttttagattgagattgaac 27652874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 48521102 - 48521036
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||| |||||||| |||||| |||| |||||||||||||| |||  | |||| |||||||||||    
T  48521102 ttagatgtttttgagtacctgaatatgtataataatgattaggcaagtttttagattgagattgaac 48521036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 52940464 - 52940506
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 45  Q
    ||||||| |||||||||||||||||||| ||||||| ||||||    
T  52940464 ttagatgattttgagtgcctgaacatgtataataataattagg 52940506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 16093479 - 16093548
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| ||||||||||||| | |||| ||||||||||| || |||  | |||| ||||||||||||||    
T  16093479 ttagatggttttgagtgcctggatatgtataataatgatttggcaagtttttagattgagattgaacctg 16093548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 146
Target Start/End: Complemental strand, 20637206 - 20637165
Alignment:
Q  105 acctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    |||||||||||||| | |||| ||||||||||||||||||||    
T  20637206 acctgaactcgccatggcgagtagaggctctcgcctcgcgag 20637165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 50687118 - 50687057
Alignment:
Q  11 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||||||| | |||| |||||||||||||| |||  | |||| ||||||||||||||    
T  50687118 ttttgagtgcctgtatatgtataataatgattaggcaagtttttagattgagattgaacctg 50687057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 222
Target Start/End: Complemental strand, 21342384 - 21342332
Alignment:
Q  170 ttaggattttgcgatttgtgtcgcacaagttgttaagagttgaaccttggggt 222  Q
    ||||| |||||||||   |||||||| ||||||| ||||||||||||||||||    
T  21342384 ttaggtttttgcgatcgttgtcgcacgagttgttgagagttgaaccttggggt 21342332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 222
Target Start/End: Complemental strand, 21347249 - 21347197
Alignment:
Q  170 ttaggattttgcgatttgtgtcgcacaagttgttaagagttgaaccttggggt 222  Q
    ||||| |||||||||   |||||||| ||||||| ||||||||||||||||||    
T  21347249 ttaggtttttgcgatcgttgtcgcacgagttgttgagagttgaaccttggggt 21347197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 321
Target Start/End: Original strand, 21787979 - 21788023
Alignment:
Q  277 tgttggtgttgattatgatgtgatataatgttatacgcattactt 321  Q
    ||||| ||||||||||||||| ||||||||||||  |||||||||    
T  21787979 tgttgatgttgattatgatgttatataatgttatgtgcattactt 21788023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 45310123 - 45310175
Alignment:
Q  94 ttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||||| ||| |||| |||||||| | |||||||| ||||||||||||||||    
T  45310123 ttggaaacctggcctgtactcgccatggcgagcagatgctctcgcctcgcgag 45310175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 50613701 - 50613769
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    |||| |||| |||||||||| |||| |||| |||||||||||||| |||  | |||| |||||||||||    
T  50613701 ccttcgatgattttgagtgcatgaatatgtataataatgattaggcaagtttttagattgagattgaac 50613769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 50621529 - 50621597
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    |||| |||| |||||||||| |||| |||| |||||||||||||| |||  | |||| |||||||||||    
T  50621529 ccttcgatgattttgagtgcatgaatatgtataataatgattaggcaagtttttagattgagattgaac 50621597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 281; Significance: 1e-157; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 1 - 347
Target Start/End: Complemental strand, 6759717 - 6759369
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattt-agaatgaaacttttggaa 99  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||| ||||||||||||||||||    
T  6759717 ccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacttggaaatattttagaatgaaacttttggaa 6759618  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||    
T  6759617 atctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaggattttgcaatctgtgtcgcacaagt 6759518  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctg-tttaagttgtgttggtgttgattatgatgtg 298  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||    
T  6759517 tgctaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgttttaagatgtgttgatgttgattatgatgtg 6759418  T
Q  299 atataatgttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  6759417 atataatgttatacgcattaattgaattatgagtgtataattgagatgt 6759369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 1 - 347
Target Start/End: Original strand, 16092002 - 16092349
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||  ||||||||||||     
T  16092002 ccttagatgcttttgagtgcatgaacatgtctaataatgattaggaaagaatgtagaatgagattaaacctgaaaagatttaaaaaaaaacttttggaat 16092101  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||    
T  16092102 tctgacctgaactcgccacggcgagcagaggctctcgcctcccgagtgacccagaaacagagtgccctgttaggattttgcgatctgtgtcacacaagtt 16092201  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctg-tttaagttgtgttggtgttgattatgatgtga 299  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| || |||| || |||||| ||||||| |||||||||||||||||    
T  16092202 gttaagagttgaaccttggggtaatattgagacttaaggatgatgttaattataatatgcgaagttgttttaagatgtgttgatgttgattatgatgtga 16092301  T
Q  300 tataatgttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||    
T  16092302 tataatgttatacgcattacttaaattatgaatgtatatttgagatgt 16092349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 347
Target Start/End: Original strand, 28648705 - 28649051
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| || |||||||||||||||||| ||| |||     
T  28648705 ccttagatgcttttgagtgcctgaacatgtctaataatgattatgaaagaatgtaggatgagattgaacatggaaagatttagaatgaaaccttttgaat 28648804  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    | |||||||||||||||||| ||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||  | ||| |||| ||||    
T  28648805 tttgacctgaactcgccacggcgagcagaggctctcgccttgcgcatgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagtt 28648904  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||    
T  28648905 gttgagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatatgtgaagctgtttaagatgtgttgatgttgattatgatgtgat 28649004  T
Q  301 ataatgttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||    
T  28649005 ataatgttatacacattacttgaattatgaatgtataattaagatgt 28649051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 347
Target Start/End: Complemental strand, 22875525 - 22875178
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattt-agaatgaaacttttggaa 99  Q
    ||||||||||||||||| | || ||||||| ||||||||||||||||||| ||||||| ||| ||||||||| |||||||| ||||||||||||| ||||    
T  22875525 ccttagatgcttttgagcgtctaaacatgtttaataatgattaggaaagattgtagaacgaggttgaacctggaaagattttagaatgaaactttgggaa 22875426  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||| | ||||||||||||    
T  22875425 -tctgacctgaactcgccatgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagggctttgcgatctatgtcgcacaagt 22875327  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctg-tttaagttgtgttggtgttgattatgatgtg 298  Q
    |||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||    
T  22875326 tgttaagagttgaaccttggggtagtattgagatgtaatggtgatgttaattataatctgtgaagctgttttaagatgtgttgatgttgattatgatgtg 22875227  T
Q  299 atataatgttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22875226 atataatgttatacgcattacttgaattatgaatgtatatttgagatgt 22875178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 22627195 - 22626872
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||| ||||||||| |||| ||||    
T  22627195 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctcgaaagattgtagaatgaaccttt-ggaa 22627097  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
    |||||||| ||||| |||||| |||||||||||||||||||||||||||| | |||||||||||| ||||||||| ||||||||  | ||| |||| |||    
T  22627096 atctgacccgaacttgccacggcgagcagaggctctcgcctcgcgagtgatctagaaacagagtgtcttgttaggtttttgcgacctttgttgcacgagt 22626997  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || |||| |||||||||    
T  22626996 tgttgagagttgaaccttggggtagtattgagacttaatgaggatgttaattataatctgtgaagctgtttaagatgtgttgatgatgataatgatgtga 22626897  T
Q  300 tataatgttatacgcattacttgaa 324  Q
    ||||||||||||| |||||||||||    
T  22626896 tataatgttatacacattacttgaa 22626872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 324
Target Start/End: Original strand, 18818071 - 18818393
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| || ||||||||||||||      
T  18818071 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacctggaaagattgtaaaatgaaacttttggtt 18818170  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||  | ||| |||| |||    
T  18818171 -tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttagg-ttttgcgacctttgttgcacgagt 18818268  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    |||| |||||||||  || |||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||    
T  18818269 tgttgagagttgaaatttagggtagtattaagacttaatgaggatgttaattataatctgtgaagctgtttaagatgtgttgatgttgattatgttgtga 18818368  T
Q  300 tataatgttatacgcattacttgaa 324  Q
    |||||||||||  ||||||||||||    
T  18818369 tataatgttatgtgcattacttgaa 18818393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 20536668 - 20536345
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| ||| |    
T  20536668 ccttagatgcttttgagtgcctgaacatgtctgataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttatggga 20536569  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||  | ||| |||| |||    
T  20536568 ttctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtgacttattagg-ttttgcgacctttgttgcacgagt 20536470  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    |||  || ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||| ||||||| ||| |||||||||||||    
T  20536469 tgtcgagtgttgaaccttggggtagtattaagacttaatgaggatgttaattataatctgtgaagttgtttaagatgtgttgatgtcgattatgatgtga 20536370  T
Q  300 tataatgttatacgcattacttgaa 324  Q
    |||||||||||  ||||||||||||    
T  20536369 tataatgttatgtgcattacttgaa 20536345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 324
Target Start/End: Original strand, 21923589 - 21923912
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| | |     
T  21923589 ccttagatgcttttgagtgtctgaacatgtctaataatgattaggacagaatgtaggatgagattgaacctgaaaagatttagaatgaaactttttggat 21923688  T
Q  101 tctga-cctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
    ||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  | ||| || | |||    
T  21923689 tctgaccctgaactcgccacggtgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttagg-ttttgcgacctttgttgcccgagt 21923787  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
     ||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||  |    
T  21923788 agttgagagttgaaccttgaggtagtattaagacttaatgatgatgttaattataatctgtgaagctgtttaagatgtgttgttgttgattatgatgcaa 21923887  T
Q  300 tataatgttatacgcattacttgaa 324  Q
     |||| |||||  ||||||||||||    
T  21923888 aataaggttatgtgcattacttgaa 21923912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 1 - 324
Target Start/End: Original strand, 18878898 - 18879220
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| ||| |    
T  18878898 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtggga 18878997  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||   | ||| |||| |||    
T  18878998 ttctgacctgaactcgccaagacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtta-gattttgcggcctttgttgcacgagt 18879096  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    |||  |||||||||||||||| ||| ||  |||||||||||||||||||| |||||||||||||||||  |||| |||| || |||||||||||||||||    
T  18879097 tgtcgagagttgaaccttgggatagcatcaagacttaatgatgatgttaactataatctgtgaagctg-ataagatgtgctgatgttgattatgatgtga 18879195  T
Q  300 tataatgttatacgcattacttgaa 324  Q
    |||||||||||  ||||||||||||    
T  18879196 tataatgttatgagcattacttgaa 18879220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 23649013 - 23648690
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaac-ttttggaa 99  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||| ||||||||    
T  23649013 ccttagatgcttttgagtgactgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctgaaaagacttagaatgaaacattttggaa 23648914  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     ||||||| |||||||||| | ||| ||||||||||||||||| |||| |||||||||||||||| ||||||||| || |||||  | ||| |||| |||    
T  23648913 ttctgacc-gaactcgccatggcgatcagaggctctcgcctcgtgagtaacccagaaacagagtgacttgttaggtttatgcgacctttgttgcacgagt 23648815  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    |||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||    
T  23648814 tgttgagagttgaaccttggggtagtattaagacctaatgatgatgttaattataatctgttaagctgtttaagatgtgttgatgttgattatgatgtga 23648715  T
Q  300 tataatgttatacgcattacttgaa 324  Q
    ||||||||| |  ||||||||||||    
T  23648714 tataatgttgtgtgcattacttgaa 23648690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 23406841 - 23406518
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||| ||||||||||||| ||| |    
T  23406841 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaaagattgtagaatgaaacttgtggga 23406742  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||  | ||| |||| |||    
T  23406741 ttctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttagg-ttttgtgacctttgttgcacgagt 23406643  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    | || |||||||||| ||||| || ||||| |||||||||| ||||||||||||||| ||||||| |||||||| ||||||| |||||| |||| |||||    
T  23406642 tattgagagttgaactttgggataatattgggacttaatgaggatgttaattataatatgtgaagttgtttaagatgtgttgatgttgactatgttgtga 23406543  T
Q  300 tataatgttatacgcattacttgaa 324  Q
    |||||||||||  ||||||||||||    
T  23406542 tataatgttatgtgcattacttgaa 23406518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 323
Target Start/End: Original strand, 25362812 - 25363123
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| |||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||          ||||||||||| ||| |     
T  25362812 ccttagatgcctttgagtgactgaacatgactaataatgattaggaaagaatgtaggatgagattgaacctg----------gaatgaaacttgtgggat 25362901  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||||||| | ||||||||||||||||||||| ||||||||| ||||||||||||||||| || | |||||||  | | | |||| ||||    
T  25362902 tctgacctgaactcgccatggcgagcagaggctctcgcctcgagagtgacccggaaacagagtgccttgtgag-actttgcgacctttcttgcacgagtt 25363000  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||| ||||||||||||| |||||||||| ||||||||||| || | ||||||||||||||||||||||||||| ||||||| |||||||||||||||| |    
T  25363001 gttgagagttgaacctttgggtagtattaagacttaatgaagaggctaattataatctgtgaagctgtttaagatgtgttgttgttgattatgatgtggt 25363100  T
Q  301 ataatgttatacgcattacttga 323  Q
    |||||||| || |||||||||||    
T  25363101 ataatgttttatgcattacttga 25363123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 324
Target Start/End: Original strand, 21918671 - 21918983
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||| |||         |||||||| ||| |     
T  21918671 ccttagatgctttggagtgcctgaacatgtctaataatgattagaaaagaatgtaggaagagattgaacctggaaa---------tgaaacttgtgggat 21918761  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||  | ||| |||  ||||    
T  21918762 tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacttgtta-gattttgcgacctttgttgcatgagtt 21918860  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||  ||||||||||| | |||||  ||| |||||||| ||||| ||||||||  ||||||||||||||||||| ||||||| || |||||||||||||||    
T  21918861 gtcgagagttgaacccttgggtaagattaagacttaacgatgaggttaattacgatctgtgaagctgtttaagatgtgttgctgctgattatgatgtgat 21918960  T
Q  301 ataatgttatacgcattacttgaa 324  Q
    |||||||| || ||||||||||||    
T  21918961 ataatgtt-tatgcattacttgaa 21918983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 1 - 304
Target Start/End: Complemental strand, 7373209 - 7372927
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||| ||||||||||||| || ||    
T  7373209 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgaaattgaacctggaaagattgtagaatgaaacttgtgaaa 7373110  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     ||||||||||||||||||||                     ||||||||||||||||||||||| ||||||||| ||||||||  | ||| |||| |||    
T  7373109 ttctgacctgaactcgccacg---------------------gcgagtgacccagaaacagagtgtcttgttagg-ttttgcgacctttgttgcacgagt 7373032  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    |||| |||||||||| ||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||    
T  7373031 tgttgagagttgaactttggggtggtagtgagacttaatgaggatgttaattataatctgtgaagctgtttaagatgtgttgatgttgattatgttgtga 7372932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 41598644 - 41598420
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||| ||||| |    
T  41598644 ccttagatgcttttgagtgcctgaacatgtctaataatgattatgaaagaatgtagaatgagattgaacctggaaagattttagaatgaaac-tttggga 41598546  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||| ||  ||||| ||| |  ||||||||||||||| | || ||||| |||    
T  41598545 atctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacctagttacagaatgcttgtttaggattttgcgatctttgccgcacgagt 41598446  T
Q  200 tgttaagagttgaaccttggggtagt 225  Q
     ||| |||||||||||||||||||||    
T  41598445 cgttgagagttgaaccttggggtagt 41598420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 31971704 - 31971393
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||          |||| |||||| ||  |     
T  31971704 ccttagatgcttttgtgtgcctgaacatgtctaataatgattaggaaaggatgtaggatgagattgaacctg----------gaattaaacttgtgagat 31971615  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    ||||||||||||||||| || |||||||||||| || ||||||||| |||||||||| |||||| |||||||| |||||||||  | ||| |||| ||||    
T  31971614 tctgacctgaactcgccccggcgagcagaggctgtcacctcgcgagcgacccagaaatagagtgacttgttag-attttgcgacctttgttgcacgagtt 31971516  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||  |||| |||||||| |||||| ||| ||||||||  |||| |||||||||||||||||||| ||| |||| | ||||| ||||||||||||||||||    
T  31971515 gtcgagagctgaacctttgggtaggattaagacttaacaatgaggttaattataatctgtgaagatgtataagatatgttgttgttgattatgatgtgat 31971416  T
Q  301 ataatgttatacgcattacttgaa 324  Q
    |||||||| || ||||||||||||    
T  31971415 ataatgtt-tatgcattacttgaa 31971393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 324
Target Start/End: Original strand, 16199319 - 16199629
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||          ||||| ||||| | |||      
T  16199319 ccttggatgcttttgagtgccttaacatgtcttataatgattaggaaagaatgtaggatgagattgaacct----------agaattaaactgtgggat- 16199407  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||||||||  |||||||| ||||||||||||||||||||||| |||||||||| ||| || |||||||||||  | ||| |||| ||||    
T  16199408 tctgacctgaactcgccacagcgagcagacgctctcgcctcgcgagtgacccaaaaacagagtgacttatt-ggattttgcgacctttgttgcacgagtt 16199506  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||  ||||||||||| | |||||| ||| ||||||||  |||| |||||||||||||||||||||||| |||| | ||||| ||||||||||||||| ||    
T  16199507 gtcgagagttgaacccttgggtaggattaagacttaacaatgaggttaattataatctgtgaagctgtataagatatgttgttgttgattatgatgtaat 16199606  T
Q  301 ataatgttatacgcattacttgaa 324  Q
    |||||||| || ||||||||||||    
T  16199607 ataatgtt-tatgcattacttgaa 16199629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 5865938 - 5866082
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |  ||    
T  5865938 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaa 5866037  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||||| |||||||||| | |||||||||||||||||||||||||    
T  5866038 tctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 5866082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 17141373 - 17141229
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |  ||    
T  17141373 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaa 17141274  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    || |||| |||||||||| | |||||||||||||||||||||||||    
T  17141273 tcagacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 17141229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 134 - 324
Target Start/End: Original strand, 45130793 - 45130981
Alignment:
Q  134 ctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagttgttaagagttgaaccttggggtagtattgagac 233  Q
    ||||||||||||||||||||||||||||||| ||| |||| |||||||||  | ||| |||| ||||||  ||||||| ||| | |||||| ||| ||||    
T  45130793 ctcgcctcgcgagtgacccagaaacagagtgacttattag-attttgcgacctttgttgcacgagttgtcgagagttggacccttgggtaggattaagac 45130891  T
Q  234 ttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgatataatgttatacgcattacttgaa 324  Q
    ||||| |||| |||||||||||||||||||||||| |||| | ||||| || ||||||||||||||||||||||| || ||||||||||||    
T  45130892 ttaataatgaggttaattataatctgtgaagctgtataagatttgttgttgatgattatgatgtgatataatgtt-tatgcattacttgaa 45130981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 21249841 - 21249697
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||| ||||| || |||||||| ||| |  ||    
T  21249841 ccttagatgcttttgagtgcccaaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagacttggaatgaaaatttggagaa 21249742  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||||| |||||||||| | |||||||||||||||||||||||||    
T  21249741 tctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 21249697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 21255679 - 21255535
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| || |||||||| ||| |  ||    
T  21255679 ccttagatgcttttgagtgcccaaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagacttggaatgaaaatttggagaa 21255580  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||||| |||||||||| | ||||||| |||||||||||||||||    
T  21255579 tctgacc-gaactcgccatggcgagcagcggctctcgcctcgcgag 21255535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 21491452 - 21491308
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||| ||| |  ||    
T  21491452 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctagaaagacttagaatgaaaatttagagaa 21491353  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    |||||||  |||| |||| | |||| ||||||||| ||||||||||    
T  21491352 tctgacc-aaacttgccatggcgagtagaggctcttgcctcgcgag 21491308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 45130692 - 45130763
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  45130692 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 45130763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 21674155 - 21674076
Alignment:
Q  11 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaa 89  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||| |||||||||||    
T  21674155 ttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatgaa 21674076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 26355359 - 26355504
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||| ||| || ||| |||||||||||||| ||||| |||||||||||  |||  |||    
T  26355359 ccttaaatgtttttgagtgcctgaacatgtctaataatgattaggagagattgaagattgagattgaacctggaaagactttagaatgaatttttgtgaa 26355458  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
     | | ||||||||| |||| | |||| ||||||||||||||| ||||    
T  26355459 ttgt-acctgaacttgccatggcgagtagaggctctcgcctcacgag 26355504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 39834292 - 39834147
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct-gaaaagatttagaatgaaacttttggaa 99  Q
    ||||||||| |||||||||||| ||| ||| | ||||||||||||||||| |||||| ||||||||||||| ||| || || |||||||| | ||||  |    
T  39834292 ccttagatgtttttgagtgcctaaacttgtatgataatgattaggaaagattgtagattgagattgaacctggaatagtttaagaatgaatc-tttgtga 39834194  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
     |   |||||||||||||| | |||| ||||||||||||||||||||    
T  39834193 gttgcacctgaactcgccatggcgagtagaggctctcgcctcgcgag 39834147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 19801088 - 19801159
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||| |  ||||| ||||||||||||    
T  19801088 ccttagatgcatatgagtgcctgaacatgtctaataatgattaggaaagactagagaataagattgaacctg 19801159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 38854912 - 38854983
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| || ||| | ||||| ||||||    
T  38854912 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattaagatttaacctg 38854983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 6520828 - 6520754
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaa 75  Q
    ||||||||| ||||||||| |||||||||||||||||| ||||||||||| || ||| | ||| |||||||||||    
T  6520828 ccttagatgtttttgagtgtctgaacatgtctaataataattaggaaagattggagattaagactgaacctgaaa 6520754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 20499118 - 20499048
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctga 73  Q
    ||||||| |||||||||||||||||||| |||||||||||||| |||  | |||| |||||||||||||||    
T  20499118 ttagatgattttgagtgcctgaacatgtataataatgattaggtaagtttttagattgagattgaacctga 20499048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 21414888 - 21414956
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||||| ||||||||||||||| |||   | |||||||||||||||| ||||||||||||||||||    
T  21414888 ccttagatgtttttgagtgcctgaagatgcacactaatgattaggaaagattgtagaatgagattgaac 21414956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 37116882 - 37116812
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctga 73  Q
    ||||||| ||||||||||||||| |||| |||||||||||||| |||  | |||| |||||||||||||||    
T  37116882 ttagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctga 37116812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 23760511 - 23760572
Alignment:
Q  11 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    |||||||| ||||||||||||||||||||||||||||| | || | | ||||||||||||||    
T  23760511 ttttgagttcctgaacatgtctaataatgattaggaaatattggatattgagattgaacctg 23760572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 17266579 - 17266647
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    ||||||| ||||||||||||||| |||| |||||||||||||| |||  | |||| |||||||||||||    
T  17266579 ttagatgtttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacct 17266647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 982989 - 983059
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctga 73  Q
    ||||||| ||||||||| |||||||||| || || ||||||||||||  | |||| |||||||||||||||    
T  982989 ttagatgattttgagtgtctgaacatgtatattagtgattaggaaagtttttagattgagattgaacctga 983059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 24353550 - 24353489
Alignment:
Q  11 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||||||||| |||| |||||||||||||| |||  | |||| ||||||||||||||    
T  24353550 ttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctg 24353489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 324
Target Start/End: Original strand, 21389353 - 21389436
Alignment:
Q  240 atgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgatataatgttatacgcattacttgaa 324  Q
    |||| ||||||| |||| ||||||||||  |||| | ||||| |||||||||||| ||| ||||||||| || ||||||||||||    
T  21389353 atgaagttaattgtaatatgtgaagctgaataagatatgttgttgttgattatgaagtgttataatgtt-tatgcattacttgaa 21389436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 40492438 - 40492506
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    ||||||| ||||||||||||||| |||| ||| |||||||||| |||  | |||| |||||||||||||    
T  40492438 ttagatgattttgagtgcctgaatatgtataagaatgattaggcaagtttttagattgagattgaacct 40492506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 13507670 - 13507713
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattag 44  Q
    ||||||||| ||||||||||||||| |||| |||||||||||||    
T  13507670 ccttagatgattttgagtgcctgaatatgtataataatgattag 13507713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 13597202 - 13597245
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattag 44  Q
    ||||||||| ||||||||||||||| |||| |||||||||||||    
T  13597202 ccttagatgattttgagtgcctgaatatgtataataatgattag 13597245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 20527871 - 20527812
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  20527871 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 20527812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 245 - 324
Target Start/End: Original strand, 21395888 - 21395966
Alignment:
Q  245 gttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgatataatgttatacgcattacttgaa 324  Q
    ||||||| |||||||||||||||  |||| | ||||| | |||||||||| ||| ||||||||| || ||||||||||||    
T  21395888 gttaattgtaatctgtgaagctgaataagatatgttgttattgattatgaagtgttataatgtt-tatgcattacttgaa 21395966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 245 - 324
Target Start/End: Original strand, 21790381 - 21790459
Alignment:
Q  245 gttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgatataatgttatacgcattacttgaa 324  Q
    ||||||| |||||||||||||||  |||| | ||||| | |||||||||| ||| ||||||||| || ||||||||||||    
T  21790381 gttaattgtaatctgtgaagctgaataagatatgttgttattgattatgaagtgttataatgtt-tatgcattacttgaa 21790459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 45
Target Start/End: Original strand, 17085770 - 17085804
Alignment:
Q  11 ttttgagtgcctgaacatgtctaataatgattagg 45  Q
    |||||||||||||||||||| ||||||||||||||    
T  17085770 ttttgagtgcctgaacatgtataataatgattagg 17085804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 18865753 - 18865695
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  18865753 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 18865695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 224
Target Start/End: Original strand, 22963249 - 22963303
Alignment:
Q  170 ttaggattttgcgatttgtgtcgcacaagttgttaagagttgaaccttggggtag 224  Q
    ||||||||||||||| | |||||||| || ||||| ||||||| |||||||||||    
T  22963249 ttaggattttgcgatctttgtcgcacgagatgttatgagttgacccttggggtag 22963303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 22996379 - 22996313
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||| ||||||||||||||| |||| ||| |||||||||| |||  | |||| |||||||||||    
T  22996379 ttagatgattttgagtgcctgaatatgtataagaatgattaggcaagtttttagattgagattgaac 22996313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 2418462 - 2418531
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| ||||||||||||||| |||| ||| |||||||||| |||  | |||| ||| ||||||||||    
T  2418462 ttagatggttttgagtgcctgaatatgtataagaatgattaggcaagtttttagattgaaattgaacctg 2418531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 16882845 - 16882914
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||| ||||| || ||||| ||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  16882845 ccttggatgccttagagtgtctgaacatacctagtattgattaggaatgaatgtagaatcagattgaacc 16882914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 17439092 - 17439161
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| ||||||||||||||| ||||  ||||||||||||| |||  | |||| || |||||||||||    
T  17439092 ttagatgattttgagtgcctgaatatgtacaataatgattaggcaagtttttagattgggattgaacctg 17439161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 22010435 - 22010487
Alignment:
Q  94 ttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||||||||| | || |||||||| | |||||||| ||||||||||||||||    
T  22010435 ttggaaatctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 22010487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 26219858 - 26219826
Alignment:
Q  315 attacttgaattatgaatgtataattgagatgt 347  Q
    ||||||||||||||||||||||| |||||||||    
T  26219858 attacttgaattatgaatgtatatttgagatgt 26219826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 297
Target Start/End: Original strand, 26222987 - 26223039
Alignment:
Q  246 ttaattataatctgtgaagctg-tttaagttgtgttggtgttgattatgatgt 297  Q
    ||||| |||||||||||||||| |||| | ||||||| |||||||||||||||    
T  26222987 ttaatgataatctgtgaagctgttttaggatgtgttgatgttgattatgatgt 26223039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 26225268 - 26225300
Alignment:
Q  315 attacttgaattatgaatgtataattgagatgt 347  Q
    ||||||||||||||||||||||| |||||||||    
T  26225268 attacttgaattatgaatgtatatttgagatgt 26225300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 280; Significance: 1e-157; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 1 - 347
Target Start/End: Complemental strand, 14973314 - 14972968
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattt-agaatgaaacttttggaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||| ||| |||||||||    
T  14973314 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattaaaccagaaaagattttagaaagaa-cttttggaa 14973216  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14973215 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcaagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 14973116  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||    
T  14973115 tgctaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctatgaagctgtttaagatgtgttgatgttgattatgatgtga 14973016  T
Q  300 tataatgttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    |||||||||||| |||||||||||||||||||||||||  ||||||||    
T  14973015 tataatgttatatgcattacttgaattatgaatgtatatatgagatgt 14972968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 3 - 347
Target Start/End: Original strand, 40213384 - 40213728
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||| ||||||| |||    
T  40213384 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaa-cttttgggaat 40213482  T
Q  102 ctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagttg 201  Q
    || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||| |||| |||||    
T  40213483 ctaacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagttg 40213582  T
Q  202 ttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgata 301  Q
    || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||    
T  40213583 ttgagagtttaaccttggggtagtattgagacttaatgatgatgttaattataatctgtaaagctgtttaagatgtgttgatgttgattatgatgtgata 40213682  T
Q  302 taatgttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  40213683 taatgttatacgcattacttggattatgaatgtataattgagatgt 40213728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 347
Target Start/End: Original strand, 11424424 - 11424770
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||     
T  11424424 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaataatgtagaatgagattgaacctggaaagatttagaatgaaactttttgaac 11424523  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||||||||| |||| |||||||||||||||||||| |||| |||||||||||| ||||||||| ||||||||  | ||| |||| ||||    
T  11424524 tctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagcgacctagaaacagagtgtcttgttaggtttttgcgacctttgttgcacgagtt 11424623  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||| |||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||  |||| ||||||||||||    
T  11424624 gttgagagttgaactttggggtagtattgagacttaatgttgatgttaattttaatctgtgaagctgtttaagatgtgttgaagttgtttatgatgtgat 11424723  T
Q  301 ataatgttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  11424724 ataatgttatacgcattacttgaattatgaatgcataattgagatgt 11424770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 1 - 338
Target Start/End: Complemental strand, 18438994 - 18438657
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||     
T  18438994 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaaaatgagattgaacctggaaagatttagaatgaaacttttggaat 18438895  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    ||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||  | ||| |||| ||||    
T  18438894 tctgacctgaagttgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaggtttttgcgacctttgttgcacgagtt 18438795  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||| |||||||||||    
T  18438794 gttgagtgttgaaccttggggtagtattgagacttaatgatgatgttaactataatctgtgaagctgtttaagatgtgttgatgttgaatatgatgtgat 18438695  T
Q  301 ataatgttatacgcattacttgaattatgaatgtataa 338  Q
    ||||||||||| |||||||||||  |||||||||||||    
T  18438694 ataatgttatatgcattacttgagatatgaatgtataa 18438657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 1 - 347
Target Start/End: Original strand, 25476046 - 25476392
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattt-agaatgaaacttttggaa 99  Q
    ||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||    
T  25476046 ccttagatgtttttgagtacctgaacatgtctaataatgattatgaaagaatgtagaatgagatcgaacctggaaagattttagaatgaaacttttggaa 25476145  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||| |||| |||    
T  25476146 -tctgacctgaactcgccacgacgagtagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagt 25476244  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    |||| |||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||| || |||| |||||||||    
T  25476245 tgttgagagttgaaccttgaggtagtattgagacttaatgaggatgttaattacaatctgtgaagctgtttaagatgtgttgatgatgataatgatgtga 25476344  T
Q  300 tataatgttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||    
T  25476345 tataatgttatgcgcattacttgaattatgaatgtatacttgagatgt 25476392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 324
Target Start/End: Original strand, 14576494 - 14576817
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||| ||||| |||||||||||| ||||||||    
T  14576494 ccttagatgcctttgagtgcctgaacatgtctaattatgattagaaaagaatgtagaatgacattgaacctggaaagacttagaatgaaacctttggaaa 14576593  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||| ||||||| |||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||  | ||| |||| ||||    
T  14576594 tctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacctagaaacaaagtgccttgttaggattttgcgacctttgttgcacgagtt 14576693  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||    
T  14576694 gttgagagttgaaccttggggtagtattaagatttaatgatgatgttaattataatctgtgaagttgtttaagatgtgttgatgttgattatgatgtgat 14576793  T
Q  301 ataatgttatacgcattacttgaa 324  Q
    ||||||||||| ||||||||||||    
T  14576794 ataatgttatatgcattacttgaa 14576817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 14573048 - 14572741
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||    
T  14573048 ccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagacttagaatgaaacctttggaaa 14572949  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||||||| | |||| ||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||  | ||| |||| ||||    
T  14572948 tctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagtgacctagaaacagagtaccttgttaggtttttgcgacctttgttgcacgagtt 14572849  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||| | ||||  ||||| ||||||||||||    
T  14572848 gttgagagttgaaccttggggtagtattaagacttaatgatgatgttaattataatttgtgaagttgtttaagatttgtttatgttgtttatgatgtgat 14572749  T
Q  301 ataatgtt 308  Q
    ||||||||    
T  14572748 ataatgtt 14572741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 26687347 - 26687024
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| ||| |    
T  26687347 ccttagatgcttttgagtgcctaaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtggga 26687248  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||  | ||| |||| | |    
T  26687247 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttagg-ttttacgacctttgttgcacgaat 26687149  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
     ||| |||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||    
T  26687148 cgttgagagttgaactttggggtagtattgggacttaatgaggatgttaattataatctgtgaagctgtttaagatgtgttgatgttgattatgttgtga 26687049  T
Q  300 tataatgttatacgcattacttgaa 324  Q
    |||||||||||  ||||||||||||    
T  26687048 tataatgttatgtgcattacttgaa 26687024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 17488317 - 17487993
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| | | |    
T  17488317 ccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtagga 17488218  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaa-cagagtgccttgttaggattttgcgatttgtgtcgcacaag 198  Q
     ||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||  | ||| |||| ||    
T  17488217 ttctgacctgaaatcgccacggcgagcagaggctctcgcctcgcgagtgacctagaaaacagagtgccttgttag-attttgcgacctttgttgcacgag 17488119  T
Q  199 ttgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtg 298  Q
    ||||  |||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||    
T  17488118 ttgtcgagagttgaaccttgggatagcattaagacttaatgatgatgttaattataatctgtgaatctgtttaagatgtgttgatgttgattatgatgtg 17488019  T
Q  299 atataatgttatacgcattacttgaa 324  Q
    ||||||||||||| ||||||||||||    
T  17488018 atataatgttatatgcattacttgaa 17487993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 10 - 324
Target Start/End: Complemental strand, 13442725 - 13442411
Alignment:
Q  10 cttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaaatctgacct 108  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||| ||| | ||||||||    
T  13442725 cttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacct 13442626  T
Q  109 gaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagttgttaagag 208  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  | ||| |||| ||||||  ||||    
T  13442625 gaacttgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttag-attttgcgacctttgttgcacgagttgtcgagag 13442527  T
Q  209 ttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgatataatgtt 308  Q
    |||||||||||| |   ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  13442526 ttgaaccttgggatgacattaagacttaatgatgatgttaattataatctgtgaagctgtttaagatgtgttgatgttgattatgatgtgatataatgtt 13442427  T
Q  309 atacgcattacttgaa 324  Q
    ||  ||||||||||||    
T  13442426 atgtgcattacttgaa 13442411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 17499799 - 17499475
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| | | |    
T  17499799 ccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgttgga 17499700  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaa-cagagtgccttgttaggattttgcgatttgtgtcgcacaag 198  Q
     ||||||||||| ||||||||  ||||||||||||||||||| | ||||||| ||||| |||||||||||||||| |||||||||  | ||| |||| ||    
T  17499699 ttctgacctgaattcgccacggtgagcagaggctctcgcctctctagtgacctagaaaacagagtgccttgttag-attttgcgacctttgttgcacgag 17499601  T
Q  199 ttgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtg 298  Q
    ||||  |||||||||||||||| ||| ||| ||||||||||||||||||||||||||| |||||| ||||||||| ||||||| |||||||| |||||||    
T  17499600 ttgtcgagagttgaaccttgggatagcattaagacttaatgatgatgttaattataatttgtgaatctgtttaagatgtgttgatgttgattttgatgtg 17499501  T
Q  299 atataatgttatacgcattacttgaa 324  Q
    ||||||||||||| ||||||||||||    
T  17499500 atataatgttatatgcattacttgaa 17499475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 1 - 324
Target Start/End: Original strand, 20698108 - 20698419
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||          ||||||||||| ||| |     
T  20698108 ccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaatgaaacttgtgggat 20698197  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||  | ||| |||| ||||    
T  20698198 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttag-attttgcgacctttgtggcacgagtt 20698296  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||  ||||||||||||| || ||| ||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||  |||||||||||||||||    
T  20698297 gtcgagagttgaacctttggatagaattaagacttaatgatgatgttaattataatctgtgaagctgttcaagatgtgttgaagttgattatgatgtgat 20698396  T
Q  301 ataatgttatacgcattacttgaa 324  Q
    |||||||| || ||||||||||||    
T  20698397 ataatgtt-tatgcattacttgaa 20698419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 23083022 - 23083341
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||||||| | |||||||||| ||||||||| | ||||||| ||||||||| ||||| |||||||||||||||||||||| | |     
T  23083022 ccttagatgcttttgagtgcctggatatgtctaatagtgattaggacaaaatgtaggatgagattggacctggaaagatttagaatgaaactttttggat 23083121  T
Q  101 tctgacc-tgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
    ||||||| | ||||||||| | |||| ||||||||||||||||||| ||||||||||||| |||| ||||||||| ||||||||  | ||| |||| |||    
T  23083122 tctgacccttaactcgccatggcgagtagaggctctcgcctcgcgaatgacccagaaacatagtgtcttgttagg-ttttgcgacctttgttgcacgagt 23083220  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    |||| |||||||||||||| ||||||||| ||||||| ||||||||||||||| |||||||||||||||||||| ||||||| | |||||||||||||||    
T  23083221 tgttcagagttgaaccttgaggtagtattaagacttagtgatgatgttaattacaatctgtgaagctgtttaagatgtgttgatattgattatgatgtga 23083320  T
Q  300 tataatgttatacgcattact 320  Q
    |||||||||||  ||||||||    
T  23083321 tataatgttatgtgcattact 23083341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 63 - 324
Target Start/End: Complemental strand, 43841330 - 43841069
Alignment:
Q  63 attgaacctgaaaagatt-tagaatgaaacttttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacaga 161  Q
    |||||||||| ||||||| ||||||||||||| ||||| |||||||||||||||||||  |||||| |||| ||||||||||||||||||||||||||||    
T  43841330 attgaacctggaaagattgtagaatgaaacttgtggaattctgacctgaactcgccacagcgagcaaaggccctcgcctcgcgagtgacccagaaacaga 43841231  T
Q  162 gtgccttgttaggattttgcgatttgtgtcgcacaagttgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtg 261  Q
    ||| ||||||||| ||||||||  | |||  ||| ||||||| ||||||  || |||||||||||||| ||||||| || ||||||||||||||||||||    
T  43841230 gtgtcttgttagg-ttttgcgacctttgttacacgagttgttgagagtttgactttggggtagtattgggacttaacgaggatgttaattataatctgtg 43841132  T
Q  262 aagctgtttaagttgtgttggtgttgattatgatgtgatataatgttatacgcattacttgaa 324  Q
    |||||||||||| ||||||| ||||||||||| ||||||||||||||||  ||||||||||||    
T  43841131 aagctgtttaagatgtgttgatgttgattatgttgtgatataatgttatgtgcattacttgaa 43841069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 17247947 - 17248168
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||| |    
T  17247947 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaac-tttggga 17248045  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||||||  ||||| ||| |  |||| |||||||||| | |||||||| |||    
T  17248046 atctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccagttacagaatgcttgtttagaattttgcgatctttgtcgcacgagt 17248145  T
Q  200 tgttaagagttgaaccttggggt 222  Q
     ||| |||||| |||||||||||    
T  17248146 cgttgagagttaaaccttggggt 17248168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 347
Target Start/End: Complemental strand, 42386871 - 42386524
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||| || || ||||||| ||||||||  |||||||||||||| |||| | |||| || ||||||||||||||   || |||||||||||||||| |     
T  42386871 ccttagttgtttatgagtgcatgaacatgcataataatgattaggcaagactttagactgtgattgaacctgaaatagttaagaatgaaacttttgggag 42386772  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtt-aggattttgcgatttgtgtcgcacaagt 199  Q
    |   |||||||||||||| | |||| |||||||||| ||||||||||  ||||   |||||  |||||||| ||||||||||||  | |||||||| |||    
T  42386771 ttatacctgaactcgccatggcgagtagaggctctcacctcgcgagttgcccaattacagaa-gccttgtttaggattttgcgaactttgtcgcacgagt 42386673  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctg-tttaagttgtgttggtgttgattatgatgtg 298  Q
    ||||  |||||||||||||||||||||||| |||||  | ||||||||||| |||||||||||||||| |||||| ||| ||| ||||||||||||||||    
T  42386672 tgttgtgagttgaaccttggggtagtattgggacttgtttatgatgttaatgataatctgtgaagctgttttaagatgttttgatgttgattatgatgtg 42386573  T
Q  299 atataatgttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    ||||||||||||| ||||| ||||||||||||||| ||| |||||||||    
T  42386572 atataatgttatatgcattgcttgaattatgaatgaatatttgagatgt 42386524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 30030288 - 30029976
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaact-tttggaa 99  Q
    |||||||||| |||||||| ||||||||||||||||||||||| |||||||||| | |||||||||||||||          |||||||||  |||||||    
T  30030288 ccttagatgcctttgagtgtctgaacatgtctaataatgattacgaaagaatgtgggatgagattgaacctg----------gaatgaaacagtttggaa 30030199  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtga-cccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaag 198  Q
     |||||||| ||||||||| | |||||||||||||||||||||||||| | ||||||| |||| ||||||||||| |||||||||  | ||| |||| ||    
T  30030198 ttctgacct-aactcgccatggcgagcagaggctctcgcctcgcgagtaatcccagaa-cagaatgccttgttag-attttgcgacctttgttgcacgag 30030102  T
Q  199 ttgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtg 298  Q
    ||||  ||||||||||||| ||||||  || |||||||||||||||||| | |||||| |||||||||||||||| ||| |||   ||||||||||||||    
T  30030101 ttgtcgagagttgaacctttgggtagctttaagacttaatgatgatgtttaatataatatgtgaagctgtttaagatgttttgacattgattatgatgtg 30030002  T
Q  299 atataatgttatacgcattacttgaa 324  Q
    |||||||||| |   |||||||||||    
T  30030001 atataatgttgtgtacattacttgaa 30029976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 53070360 - 53070583
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |   ||| |||||| ||||||| | ||    
T  53070360 ccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggattaattaagaatg-aactttttggaa 53070458  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttg-ttaggattttgcgatttgtgtcgcacaagt 199  Q
     ||||||||||||||||| | |||| |||||||||||||||||||||  ||||   |||||  |||||| ||||||||||||||| | |||||||| |||    
T  53070459 gctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagttgcccaattacaga-agccttgtttaggattttgcgatctttgtcgcacgagt 53070557  T
Q  200 tgttaagagttgaaccttggggtagt 225  Q
     ||| |||||||||||||||||||||    
T  53070558 cgttgagagttgaaccttggggtagt 53070583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 323
Target Start/End: Complemental strand, 12399655 - 12399347
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||| | |||||||||          ||||||||||| ||        
T  12399655 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaaaatataggatgggtttgaacctg----------gaatgaaacttgtgaggt 12399566  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||||||||| |||| | ||||||||||||| ||||||||||||||||||  || ||||||||  |||| |||  | ||| |||| ||||    
T  12399565 tctgacctgaactcgccacggcgagtaaaggctctcgcctcacgagtgacccagaaacag--tgacttgttag--ttttccgacctttgttgcacgagtt 12399470  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    |||  |  || | |||| |||||| ||| |||| |||||| || ||||| |||||||||||||||| |||||| ||||||| ||||||||||||||||||    
T  12399469 gttggggattaagcctttgggtagcattaagacataatgaagaggttaactataatctgtgaagctatttaagatgtgttgttgttgattatgatgtgat 12399370  T
Q  301 ataatgttatacgcattacttga 323  Q
    |||||||  || |||||||||||    
T  12399369 ataatgtcttatgcattacttga 12399347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 132 - 323
Target Start/End: Complemental strand, 16796875 - 16796685
Alignment:
Q  132 ctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagttgttaagagttgaaccttggggtagtattgag 231  Q
    ||||||||||||||||||||| ||||||||||||||||| || | |||||||  | ||| |||| | ||||||||||||||||||| |||||| ||| ||    
T  16796875 ctctcgcctcgcgagtgacccggaaacagagtgccttgtgag-actttgcgacctttgttgcacgaattgttaagagttgaacctttgggtagcattaag 16796777  T
Q  232 acttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgatataatgttatacgcattacttga 323  Q
    ||||||||| || | |||||||||| ||||||| |||||||| ||||||| | |||||||||||||||||||||||| || |||||||||||    
T  16796776 acttaatgaagaggctaattataatatgtgaagttgtttaagatgtgttgtttttgattatgatgtgatataatgttttatgcattacttga 16796685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 12340212 - 12340068
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| |  ||    
T  12340212 ccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggagaa 12340113  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||| | |||||||||||| | |||||||||||||||||||||||||    
T  12340112 tct-aactgaactcgccatggcgagcagaggctctcgcctcgcgag 12340068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 3 - 146
Target Start/End: Original strand, 12852027 - 12852169
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaatc 102  Q
    ||||||||  |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||| ||||| |||||||||||||||||  ||||    
T  12852027 ttagatgcccttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaatctggaaagacttagaatgaaacttttgataatc 12852126  T
Q  103 tgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||| |||||||||||| | |||||||||||||| ||||||||||    
T  12852127 tga-ctgaactcgccatggcgagcagaggctcttgcctcgcgag 12852169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 9513370 - 9513228
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||| |||||||||||| |||||  |    
T  9513370 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctgaaaagattttagaatgaaatttttgtga 9513271  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcg 142  Q
    |    |||||||||| ||| | |||||||||||||||||||||    
T  9513270 actaaacctgaactcaccatggcgagcagaggctctcgcctcg 9513228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 9521345 - 9521203
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||| |||||||||||| |||||  |    
T  9521345 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctgaaaagattttagaatgaaatttttgtga 9521246  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcg 142  Q
    |    |||||||||| ||| | |||||||||||||||||||||    
T  9521245 actaaacctgaactcaccatggcgagcagaggctctcgcctcg 9521203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 146
Target Start/End: Complemental strand, 14666053 - 14665921
Alignment:
Q  13 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaatctgacctgaac 112  Q
    ||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| |  ||||||| ||||||    
T  14666053 ttgagtgcctgaacatggctaatattgattaggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggagaatctga-ctgaac 14665955  T
Q  113 tcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    |||| | | |||||||||||||||||||||||||    
T  14665954 tcgcaatggcgagcagaggctctcgcctcgcgag 14665921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 146
Target Start/End: Complemental strand, 14669208 - 14669076
Alignment:
Q  13 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaatctgacctgaac 112  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| |  ||||||| ||||||    
T  14669208 ttgagtgcctgaacatgtctaatattgaataggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggagaatctga-ctgaac 14669110  T
Q  113 tcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    |||||| | ||||||||||||||| |||||||||    
T  14669109 tcgccatggcgagcagaggctctcacctcgcgag 14669076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 146
Target Start/End: Complemental strand, 14735566 - 14735434
Alignment:
Q  13 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaatctgacctgaac 112  Q
    ||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| |  ||||||| ||||||    
T  14735566 ttgagtgcctgaacatggctaatattgattaggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggagaatctga-ctgaac 14735468  T
Q  113 tcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    |||| | | |||||||||||||||||||||||||    
T  14735467 tcgcaatggcgagcagaggctctcgcctcgcgag 14735434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 13209989 - 13210133
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatg-aaacttttggaa 99  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||| ||||| |||||||| ||||| |||  |    
T  13209989 ccttagatgcttttgagtgcctaaacatgtctaata-tgattaggaaagaaagtagaatgagattgaacctggaaagacttagaatgaaaactcttgaga 13210087  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    || ||||| |||||||||| | |||| ||||||||||||||||||||    
T  13210088 atgtgacc-gaactcgccatggcgagtagaggctctcgcctcgcgag 13210133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 12933971 - 12934117
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||| ||||| |||||||||||| |||  |||    
T  12933971 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctggaaagattttagaatgaaattttgtgaa 12934070  T
Q  100 atctg-acctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
      ||| |||||||||||||| | ||||||||| ||||||||||||||||    
T  12934071 --ctgaacctgaactcgccatggcgagcagagactctcgcctcgcgagt 12934117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 14179782 - 14179693
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaa 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||    
T  14179782 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacttggaaagacttagaatgaaa 14179693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 32308128 - 32307983
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||   |||| |||||||||||  |||||| |    
T  32308128 ccttagatgcttttgagtgcctgaacatatctaataatgattaggaaagattggagaatgagattgaacctaggaagactttagaatgaa--ttttggga 32308031  T
Q  100 atctg-acctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
    | ||| |||||||||||||| | ||||||||||||||||||||||||||    
T  32308030 a-ctgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 32307983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 4588476 - 4588590
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| |  ||    
T  4588476 ccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctgtaaagacttagaatgaaactttggagaa 4588575  T
Q  101 tctgacctgaactcgc 116  Q
    ||||| ||||||||||    
T  4588576 tctga-ctgaactcgc 4588590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 16097790 - 16097645
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||| ||| ||||||||| |||||||||||||||||| ||||||||||| || |||||||||||||||||||||||| ||||||||| || |||||  |    
T  16097790 ccttaaatgtttttgagtgtctgaacatgtctaataattattaggaaagattggagaatgagattgaacctgaaaagattttagaatg-aatttttgtga 16097692  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||  ||||||||||||||| |  ||| ||||||||||||||||||||    
T  16097691 attggacctgaactcgccatggtgagtagaggctctcgcctcgcgag 16097645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 1644344 - 1644489
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    |||| |||| |||||||||||||||||||||| ||||||||||||||||| |  ||||||||||||||||||| |||| |||||||||||  |||||  |    
T  1644344 ccttggatgtttttgagtgcctgaacatgtctgataatgattaggaaagattagagaatgagattgaacctgagaagactttagaatgaa--ttttgtga 1644441  T
Q  100 atctg-acctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
    | ||| |||||||||||||| | ||||||||||||||||||||||||||    
T  1644442 a-ctgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 1644489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 49389305 - 49389446
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| | ||| |||||||||||  |||||  |    
T  49389305 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggagagactttagaatgaa--ttttgtga 49389402  T
Q  100 atctg-acctgaactcgccacgacgagcagaggctctcgcctcgc 143  Q
    | ||| |||||||||||||| | |||||||||| |||||||||||    
T  49389403 a-ctgaacctgaactcgccatggcgagcagaggttctcgcctcgc 49389446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 49667745 - 49667890
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||||| |  |||||||||||||||||| ||||| ||||||||||||  ||  |||    
T  49667745 ccttagatg-ttttgagcgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctggaaagattttagaatgaaatattgtgaa 49667843  T
Q  100 atctg-acctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
      ||| |||||||||||||| | ||||||||||||||||||||||||||    
T  49667844 --ctgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 49667890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 245 - 323
Target Start/End: Complemental strand, 14179648 - 14179570
Alignment:
Q  245 gttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgatataatgttatacgcattacttga 323  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| || |||||||||||    
T  14179648 gttaattataatctgtgaagctgtttaagatgtgttgttgttgattatgatgtgatataatgttttatgcattacttga 14179570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 328
Target Start/End: Original strand, 2050862 - 2051187
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||| |||||||||||| ||||||| ||||||||||||||||||| | |||| |||||||||||| ||| || || ||||||  | |||||| |     
T  2050862 ccttagatgtttttgagtgcctcaacatgtgtaataatgattaggaaagattctagattgagattgaacc-gaatagtttaagaatg-gatttttgggag 2050959  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |   |||||||||| |||   |||| |||||||||||||||| ||||  |||||  ||| | ||| |  ||||||||||||||| | |||||||  ||||    
T  2050960 ttacacctgaactctccatagcgagtagaggctctcgcctcgtgagttgcccagttacaaaatgcttgtttaggattttgcgatctttgtcgcatgagtt 2051059  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctg-tttaagttgtgttggtgttgattatgatgtga 299  Q
    ||| |||||||||| ||| ||| ||| |||   ||  | ||||| ||||| || || |||||||||| | |||| ||  ||| ||||| |||| ||||||    
T  2051060 gttgagagttgaacattgaggtcgtaatgaagattgtttatgatattaatgatgatttgtgaagctgctataagatg-attgatgttgtttataatgtga 2051158  T
Q  300 tataatgttatacgcattacttgaattat 328  Q
    ||||||  |||| ||||||||||||||||    
T  2051159 tataattgtatatgcattacttgaattat 2051187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 43842638 - 43842572
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattga 67  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  43842638 ccttagatgcttttgagtgcctgagcatgtctaataatgattaggaaagaatgtaggatgagattga 43842572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 24153115 - 24153193
Alignment:
Q  246 ttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgatataatgttatacgcattacttgaa 324  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||  |||||| |||||    
T  24153115 ttaattataatctgtgaagctgtttaagatgtgttgatgttgattatgatgtgatattatgttatgtgcattatttgaa 24153193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 3 - 147
Target Start/End: Complemental strand, 324693 - 324549
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac-ctgaaaagatttagaatgaaacttttggaaat 101  Q
    ||||||| ||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||   ||| || || |||||| || |||||| | |    
T  324693 ttagatgattttgagtgcctgaatatgtataataatgattaggaaagattgtagaatgagattgaactgagaatagtttaagaatg-aatttttgggagt 324595  T
Q  102 ctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
       ||||||||||||||   |||| |||||||||||||||||||||    
T  324594 tgcacctgaactcgccatagcgagtagaggctctcgcctcgcgagt 324549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 328
Target Start/End: Original strand, 52523390 - 52523715
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct-gaaaagatttagaatgaaacttttggaaat 101  Q
    ||||||| |||||||||||||||||||| ||||||| ||||||||||| | |||  ||| ||||||||| ||| || || ||||||  | |||||| | |    
T  52523390 ttagatgattttgagtgcctgaacatgtgtaataattattaggaaagattctagtttgatattgaacctggaacagtttaagaatg-gatttttgggagt 52523488  T
Q  102 ctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagttg 201  Q
       ||||||||||||||   |||| |||||| |||||||  |||||  |||||  ||||| ||| |  ||||||||||||||| | |||||||| |||      
T  52523489 tacacctgaactcgccatagcgagtagaggccctcgcctgacgagttgcccagttacagaatgcttgtttaggattttgcgatctttgtcgcacgagtca 52523588  T
Q  202 ttaagagttgaaccttggggtagtattg-agacttaatgatgatgttaattataatctgtgaagctgtt-taagttgtgttggtgttgattatgatgtga 299  Q
    || |||||||||| ||||||||||| || ||| |  || | ||| ||||| || ||||| ||||||||| |||| ||  ||| ||||| |||| ||||||    
T  52523589 ttgagagttgaactttggggtagtaatgaagattgtat-aagatattaatgatgatctgagaagctgttataagatg-attgatgttgtttataatgtga 52523686  T
Q  300 tataatgttatacgcattacttgaattat 328  Q
    ||||||  |||| ||||||||||||||||    
T  52523687 tataattgtatatgcattacttgaattat 52523715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 16104240 - 16104169
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||    
T  16104240 ccttagatgtttctgagtgcctgaacatgtctaataatgattaggaaagattggagaatgaggttgaacctg 16104169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 17247181 - 17247239
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaat 59  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  17247181 ccttagatgtttttgagtgccggaacatgtctaataatgattaggaaagaatgtagaat 17247239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 14234950 - 14234809
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||  |||||||||||||||||||| |||| |||||||||||||| | |||| |||||||||||| ||||   || |||||| || |||||| |     
T  14234950 ccttagatttttttgagtgcctgaacatgtataatgatgattaggaaagattatagattgagattgaacccgaaatagttaagaatg-aatttttgggag 14234852  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgc 143  Q
    |   |||||||||||||| | |||| |||||| ||||||||||    
T  14234851 ttgcacctgaactcgccatggcgagtagaggccctcgcctcgc 14234809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 12171778 - 12171827
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaga 50  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  12171778 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaaga 12171827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 16809845 - 16809724
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||| |||||||||||||| |||||||    |||||||||||||||||||||||| |||||||||| ||||          ||||||||||| ||| |     
T  16809845 ccttaaatgcttttgagtgcttgaacat----aataatgattaggaaagaatgtaggatgagattgatcctg----------gaatgaaacttgtgggat 16809760  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctc 136  Q
    |||||||||||||||||| | |||||||| ||||||    
T  16809759 tctgacctgaactcgccatggcgagcagatgctctc 16809724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 1465070 - 1465141
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| |||||||||||||||| ||| | || ||||||| |||||| |||||| ||||||||||||||    
T  1465070 ccttagatgtttttgagtgcctgaacttgtatgatgatgattatgaaagattgtagattgagattgaacctg 1465141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 15471384 - 15471313
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| |||||||| ||||||||||| |||| |||||||||||||| || ||| | ||||||||||||    
T  15471384 ccttagatgtttttgagtccctgaacatgtataatgatgattaggaaagattggagattaagattgaacctg 15471313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 22109938 - 22110007
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| |||||||||||||||||||| |||||||||||||| |||  | |||  ||||||||||||||    
T  22109938 ttagatgtttttgagtgcctgaacatgtataataatgattaggcaagtttttagtttgagattgaacctg 22110007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 23275201 - 23275133
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||||| ||||||||||||||| |||| |||||||||||||| |||  | |||| |||||||||||    
T  23275201 ccttagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaac 23275133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 14501659 - 14501588
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| ||||||||||||||| |||| |||||||||||||| |||  | |||| |||||||| |||||    
T  14501659 ccttagatgattttgagtgcctgaatatgtataataatgattaggcaaggttttagattgagattggacctg 14501588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 43927638 - 43927597
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattag 44  Q
    ||||||| |||||||||||||||||||| |||||||||||||    
T  43927638 ttagatgattttgagtgcctgaacatgtataataatgattag 43927597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 45797701 - 45797632
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| ||||||||||||||| |||| |||||||||||||| |||  | |||| |||||||| |||||    
T  45797701 ttagatgattttgagtgcctgaatatgtataataatgattaggtaagtttttagattgagattggacctg 45797632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 605952 - 606023
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| |||||||||||||||  ||| |||||||||||||| ||   | |||| ||||||||||||||    
T  605952 ccttagatgattttgagtgcctgaatgtgtataataatgattaggcaattttctagattgagattgaacctg 606023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 839668 - 839609
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  839668 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 839609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 12378456 - 12378385
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| ||||||||||||||| ||||  ||||||||||||| | |  | |||| ||||||||||||||    
T  12378456 ccttagatgattttgagtgcctgaatatgtacaataatgattaggcatgtttttagattgagattgaacctg 12378385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 23412834 - 23412905
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| ||||||||||||||| |||| ||| |||||||||| |||  | |||| |||||||| |||||    
T  23412834 ccttagatgattttgagtgcctgaatatgtataaaaatgattaggcaagtttttagattgagattggacctg 23412905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 24188199 - 24188140
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  24188199 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 24188140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 55149400 - 55149341
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  55149400 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 55149341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 316654 - 316612
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 45  Q
    ||||||| ||||||||||||||| |||| ||||||||||||||    
T  316654 ttagatgtttttgagtgcctgaatatgtataataatgattagg 316612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 9578136 - 9578070
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    |||||||  ||||||||||||||||||| | |||||||||||| |||| | |||| ||| |||||||    
T  9578136 ttagatgactttgagtgcctgaacatgtatgataatgattaggcaagattttagattgaaattgaac 9578070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 21837958 - 21837892
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||| ||||||||| ||||| |||| |||||||||||||| |||  | |||| |||||||||||    
T  21837958 ttagatgattttgagtgtctgaatatgtataataatgattaggcaagtttttagattgagattgaac 21837892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 15691950 - 15692019
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  15691950 ccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 15692019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 23318333 - 23318390
Alignment:
Q  11 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaa 68  Q
    |||||||||||||||||||| ||| |||||||||| || ||| |||| ||| ||||||    
T  23318333 ttttgagtgcctgaacatgtttaagaatgattaggcaaaaatttagattgaaattgaa 23318390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 23704441 - 23704510
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  23704441 ccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 23704510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 23722897 - 23722966
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  23722897 ccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 23722966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 23741353 - 23741422
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  23741353 ccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 23741422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 37250775 - 37250844
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| || |||||  |||||||||| |||||||||||||| |||  | |||| ||||||||||||||    
T  37250775 ttagatgattctgagtatctgaacatgtataataatgattaggcaagtttttagattgagattgaacctg 37250844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 41201470 - 41201539
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  41201470 ccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 41201539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 4291194 - 4291150
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtag 56  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||    
T  4291194 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 4291150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 17710275 - 17710319
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtag 56  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||    
T  17710275 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 17710319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 21618590 - 21618558
Alignment:
Q  315 attacttgaattatgaatgtataattgagatgt 347  Q
    ||||||||||||||||||||||| |||||||||    
T  21618590 attacttgaattatgaatgtatatttgagatgt 21618558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 36166739 - 36166707
Alignment:
Q  315 attacttgaattatgaatgtataattgagatgt 347  Q
    ||||||||||||||||||||||| |||||||||    
T  36166739 attacttgaattatgaatgtatatttgagatgt 36166707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 41092030 - 41092074
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtag 56  Q
    |||||||||||||||||| ||| || |||||||||| ||||||||    
T  41092030 tttgagtgcctgaacatgcctagtattgattaggaatgaatgtag 41092074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 1 - 346
Target Start/End: Original strand, 16260 - 16606
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattta-gaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||  ||||||||| |||||||    
T  16260 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttagaatgagattgaacctggaaagattttcgaatgaaacgtttggaa 16359  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
    |||| |||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||    
T  16360 atctaacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccaaaaacagagtgccttgttgggattttgcgatctgtgtcgcacaagt 16459  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||    
T  16460 tgttaggagttgaaccttggggtagtattgagacttaatgatgatgttaattatagtctgtgaagctgtttaagatgtgttgatgttgattttgatgtga 16559  T
Q  300 tataatgttatacgcattacttgaattatgaatgtataattgagatg 346  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||    
T  16560 tataatgttatacgcattacttgaattatgaatgtatacttgagatg 16606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 274; Significance: 1e-153; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 1 - 347
Target Start/End: Complemental strand, 4968 - 4621
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattt--agaatgaaacttttgga 98  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||  ||||||||||||| |||    
T  4968 ccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagatttttagaatgaaactttggga 4869  T
Q  99 aatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaag 198  Q
    | |||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||| || ||| ||||||||||||||||  ||||||||||||    
T  4868 a-tctgacctgaactcgccatggcgagcagaggctctcgcttcgcgagtgacccagaaacagggtacctagttaggattttgcgatcagtgtcgcacaag 4770  T
Q  199 ttgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtg 298  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  4769 ttgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagatgtgttgatgttgattatgatgtg 4670  T
Q  299 atataatgttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4669 atataatgttatacgcattacttgaattatgaatgtatatttgagatgt 4621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 1 - 347
Target Start/End: Complemental strand, 12550 - 12203
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattt--agaatgaaacttttgga 98  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||  ||||||||||||| |||    
T  12550 ccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagatttttagaatgaaactttggga 12451  T
Q  99 aatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaag 198  Q
    | |||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||| || ||| ||||||||||||||||  ||||||||||||    
T  12450 a-tctgacctgaactcgccatggcgagcagaggctctcgcttcgcgagtgacccagaaacagggtacctagttaggattttgcgatcagtgtcgcacaag 12352  T
Q  199 ttgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtg 298  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  12351 ttgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagatgtgttgatgttgattatgatgtg 12252  T
Q  299 atataatgttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  12251 atataatgttatacgcattacttgaattatgaatgtatatttgagatgt 12203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 1 - 347
Target Start/End: Complemental strand, 22502 - 22155
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattt--agaatgaaacttttgga 98  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||  ||||||||||||| |||    
T  22502 ccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagatttttagaatgaaactttggga 22403  T
Q  99 aatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaag 198  Q
    | |||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||| || ||| ||||||||||||||||  ||||||||||||    
T  22402 a-tctgacctgaactcgccatggcgagcagaggctctcgcttcgcgagtgacccagaaacagggtacctagttaggattttgcgatcagtgtcgcacaag 22304  T
Q  199 ttgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtg 298  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  22303 ttgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagatgtgttgatgttgattatgatgtg 22204  T
Q  299 atataatgttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22203 atataatgttatacgcattacttgaattatgaatgtatatttgagatgt 22155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 267; Significance: 1e-149; HSPs: 3)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 347
Target Start/End: Original strand, 16876 - 17222
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||     
T  16876 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagatttagaatgaaacttttggaat 16975  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||  | ||| |||| ||||    
T  16976 tctgacctgaactcgccacggagagcagaggctctcgcctcgcgagtgacccagaaacagagtaccttattaggattttgcgacctttgttgcacgagtt 17075  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||  |||||| ||||||||||||||||||    
T  17076 gttgagagttaaaccttggggtagtattgagacttaatcatgatgttaattataatctgtaaagctgtttaagacgtgttgatgttgattatgatgtgat 17175  T
Q  301 ataatgttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||    
T  17176 ataatgttaaacgcattacttgaattatgaatgtatacttgagatgt 17222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 79023 - 79094
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  79023 ccttagatgcttttgagtgcatgaacatgtttaataatgattaggaaggaatgtagaatgagattgaacctg 79094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 122 - 225
Target Start/End: Original strand, 79111 - 79214
Alignment:
Q  122 cgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtt-aggattttgcgatttgtgtcgcacaagttgttaagagttgaaccttggg 220  Q
    |||| |||||||||||||||||||||  ||||   |||||  |||||||| ||||||||||||| | |||||||| |||  || ||||||||||||||||    
T  79111 cgagtagaggctctcgcctcgcgagttgcccaattacagaa-gccttgtttaggattttgcgatctttgtcgcacgagtcattgagagttgaaccttggg 79209  T
Q  221 gtagt 225  Q
    |||||    
T  79210 gtagt 79214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 265; Significance: 1e-148; HSPs: 3)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 1 - 344
Target Start/End: Original strand, 25726 - 26069
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||  ||||||||    
T  25726 ccttagatggttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgaaaagattgtagaatgaat-ttttggaa 25824  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||| |||| |||    
T  25825 atctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagt 25924  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||    
T  25925 tgctaagagctgaaccttggggtagtattgagacttaatgatgatgttaattataatctatgaagctgtttaagatgtgttgatgttgattatgatgtga 26024  T
Q  300 tataatgttatacgcattacttgaattatgaatgtataattgaga 344  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||    
T  26025 tataatgttaaacgcattacttgaattatgaatgtatacttgaga 26069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 1 - 336
Target Start/End: Original strand, 33155 - 33491
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattt-agaatgaaacttttggaa 99  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||    
T  33155 ccttagatgcttctgagtgcctggacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattttagaatgaaacttttggaa 33254  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     ||| |||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||  ||||||    
T  33255 gtcttacctgaactcgccacggcgagcaaaggctctcgcctcgcgtgtgacccagaaacagagtgccttgtcaggattttgcgatctgtgtcatacaagt 33354  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| || |||| |||||||||||||||||    
T  33355 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataacctatgaagctgtttaagatgcgttgatgttgattatgatgtga 33454  T
Q  300 tataatgttatacgcattacttgaattatgaatgtat 336  Q
    |||||||||| ||||||||||||||||||||||||||    
T  33455 tataatgttaaacgcattacttgaattatgaatgtat 33491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 44682 - 44714
Alignment:
Q  315 attacttgaattatgaatgtataattgagatgt 347  Q
    ||||||||||||||||||||||| |||||||||    
T  44682 attacttgaattatgaatgtatatttgagatgt 44714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 259; Significance: 1e-144; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 2 - 347
Target Start/End: Original strand, 3564026 - 3564371
Alignment:
Q  2 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||| ||||||||||    
T  3564026 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaa-cttttggaaa 3564124  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||||||||  |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||| |||| ||||    
T  3564125 tctgacctgaactcgccacagcgagcaaatgctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagtt 3564224  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||| ||||||| ||||||||||||||||||    
T  3564225 gttaagagtttaaccttggggtagtattgagacttaatgatgatgttaattataacctatgaagttgtttaagatgtgttgatgttgattatgatgtgat 3564324  T
Q  301 ataatgttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
     ||||||||||||||||||||||||||||||||||||||||||||||    
T  3564325 ctaatgttatacgcattacttgaattatgaatgtataattgagatgt 3564371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 38227940 - 38227635
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |     
T  38227940 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagatttagaatgaaactttttggat 38227841  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||  | ||| |||| ||||    
T  38227840 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccataaacagagtgccttgttaggtttttgcgacctttgttgcacgagtt 38227741  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| | |||||| | ||||| ||||||||| ||||||||    
T  38227740 gttaagagttgaaccttggggtagtattaagacttaatgatgatgttaattataatatgtgaagatatttaagatatgttgatgttgattaagatgtgat 38227641  T
Q  301 ataatg 306  Q
    ||||||    
T  38227640 ataatg 38227635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 9509649 - 9509326
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| ||| |    
T  9509649 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtggga 9509550  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  | ||| |||  |||    
T  9509549 ttctgacctgaactcgccacggcgaggagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttag-attttgcgacctttgttgcaagagt 9509451  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    |||  |||||||||||||||| ||| ||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  9509450 tgtcgagagttgaaccttgggatagcattaagacttaatgaggatgttaattataatctgtgaagctgtttaagatgtgttgatgttgattatgatgtga 9509351  T
Q  300 tataatgttatacgcattacttgaa 324  Q
    |||| ||||||  ||||||||||||    
T  9509350 tatagtgttatgtgcattacttgaa 9509326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 1 - 347
Target Start/End: Original strand, 15143698 - 15144045
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattt-agaatgaaacttttggaa 99  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||| |||||||| ||||||  |    
T  15143698 ccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagattttagaatgagattgaacctggaaagattttagaatgaa-cttttgtga 15143796  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     ||||||||| |||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  | ||| |||| |||    
T  15143797 ttctgacctgtactcgccatggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgccttgttaggattttgcgacctttgttgcacgagt 15143896  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctg-tttaagttgtgttggtgttgattatgatgtg 298  Q
    || |||||||||||||| ||||||||| | |||||||||||||||||| | |||||||||| |||||| |||||| ||| |||   ||||||||||||||    
T  15143897 tgctaagagttgaacctcggggtagtactaagacttaatgatgatgtttaatataatctgtcaagctgttttaagatgttttgacattgattatgatgtg 15143996  T
Q  299 atataatgttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    |||| |||||||||||||||||| ||||||||||||||| |||||||||    
T  15143997 atatgatgttatacgcattacttaaattatgaatgtatacttgagatgt 15144045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 12699292 - 12698969
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||| | ||||||||||  ||| |    
T  12699292 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgaaattgaacctggaaagattgttgaatgaaactcgtggga 12699193  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     |||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||| |||| ||||||||| ||||||||  | ||| |||| |||    
T  12699192 ttctgacctgaactcgccacggcgagcagaggctctcacctcgtgagtgacccagaaacaaagtgacttgttagg-ttttgcgacctttgttgcacgagt 12699094  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    |||  | |||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  12699093 tgtcgatagttgaaccttggggtagtattaagagttaatgaggatgttaattataatctgtgaagctgtttaagatgtgttgatgttgattatgatgtga 12698994  T
Q  300 tataatgttatacgcattacttgaa 324  Q
    |||||||||||  ||||||||||||    
T  12698993 tataatgttatgtgcattacttgaa 12698969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 323
Target Start/End: Original strand, 16385919 - 16386230
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||          |||| |||||| ||| |     
T  16385919 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaattaaacttgtgggat 16386008  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    ||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||  | ||| |||  ||||    
T  16386009 tctaacctgaactcgccacggcgagcagtggctctcgcctcgcgagtgacccagaaacagagtgacttgttag-attttgcgacctttgttgcatgagtt 16386107  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||  ||||||||||||| |||||  ||| ||||||||||| || ||||| ||||||||||||||||||||||| ||||||| ||||||||||||||| ||    
T  16386108 gtccagagttgaacctttgggtaacattaagacttaatgaagaggttaactataatctgtgaagctgtttaagatgtgttgttgttgattatgatgtaat 16386207  T
Q  301 ataatgttatacgcattacttga 323  Q
    |||||||| || |||||||||||    
T  16386208 ataatgttttatgcattacttga 16386230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 40443837 - 40443527
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||    |||       |||| ||| |     
T  40443837 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttaggatgagattgaacctggaa----tta-------acttgtgggat 40443749  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||  | ||| |||| ||||    
T  40443748 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttatt-ggattttgcgacctttgttgcacgagtt 40443650  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||  |||| |||||| | |||||| ||| ||||||||  |||| |||||||||||||||||||||||| |||| | ||| | ||||||||||||||||||    
T  40443649 gtcgagagatgaacccttgggtaggattaagacttaacaatgaggttaattataatctgtgaagctgtataagatatgtcgttgttgattatgatgtgat 40443550  T
Q  301 ataatgttatacgcattacttgaa 324  Q
    |||||||| || ||||||||||||    
T  40443549 ataatgtt-tatgcattacttgaa 40443527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 323
Target Start/End: Complemental strand, 26212445 - 26212134
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| ||||||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||          ||||||||||| ||        
T  26212445 ccttagatgcctttgagtgcctgaacatgtctaatatttattaggtaagaatgtaggatgagattgaacctg----------gaatgaaacttgtgaggt 26212356  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaa-cagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||  |||||||  ||||||||  | ||| |||| |||    
T  26212355 tctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaaacagagtgatttgttag--ttttgcgacctttgttgcacgagt 26212258  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    |||| ||  || |||||| |||||| ||| ||||||||||| || ||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||    
T  26212257 tgttgaggattaaacctttgggtagcattaagacttaatgaagaggttaattataatctgtgaagctgtttaagatgtgttgttgttgattataatgtga 26212158  T
Q  300 tataatgttatacgcattacttga 323  Q
    ||||||||| || |||||||||||    
T  26212157 tataatgttttatgcattacttga 26212134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 324
Target Start/End: Original strand, 27847505 - 27847816
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||          |||| |||||| ||| |     
T  27847505 ccttagatgcttttgagtgcctgaacatgtctaattatgattaggaaagaatttaggatgagattgaacctg----------gaattaaacttatgggat 27847594  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    | |||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||  | ||| |||| ||||    
T  27847595 tttgacctgaactcgccacggcaagcagaggctctcgcctcgcgagtgacccaaaaacagagtgacttgtta-gattttgcgacctttgttgcacgagtt 27847693  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||  ||||||||||| | |||||| ||| ||||||||| ||||  |||| |||||||||||||||||  |||| | ||||| ||||||||||||||||      
T  27847694 gtcgagagttgaacccttgggtaggattaagacttaataatgagattaactataatctgtgaagctgaataagatatgttgttgttgattatgatgtgtg 27847793  T
Q  301 ataatgttatacgcattacttgaa 324  Q
    |||||||| || ||||||||||||    
T  27847794 ataatgtt-tatgcattacttgaa 27847816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 44116964 - 44116741
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||| ||    
T  44116964 ccttatatgcctttgagtccctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacccggaaagatttagaatgaaac-tttgggaa 44116866  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||| |||  |||||  ||    ||||||||||||||| | | | |||| |||     
T  44116865 tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgactcagttacagaacgctagtttaggattttgcgatctttattgcacgagtc 44116766  T
Q  201 gttaagagttgaaccttggggtagt 225  Q
    ||| || ||||||||||||||||||    
T  44116765 gttgagggttgaaccttggggtagt 44116741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 17061621 - 17061845
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||| |||||||| |||| ||||  |    
T  17061621 ccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggatagattttagaataaaac-tttgaga 17061719  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
    ||||||||||||||||| | | |||| ||||||||||||||||||||||||| |   ||||| ||| |  ||||||||||||||| | |||||||| |||    
T  17061720 atctgacctgaactcgcgatggcgagtagaggctctcgcctcgcgagtgacctatttacagaatgcttgtttaggattttgcgatctttgtcgcacgagt 17061819  T
Q  200 tgttaagagttgaaccttggggtagt 225  Q
     ||| ||||||||||| |||||||||    
T  17061820 cgttgagagttgaaccatggggtagt 17061845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 112 - 308
Target Start/End: Complemental strand, 10589386 - 10589191
Alignment:
Q  112 ctcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagttgttaagagttg 211  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||  | | | |||| ||||||  |||||||    
T  10589386 ctcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttag-attttgcgaccttttttgcacgagttgtctagagttg 10589288  T
Q  212 aaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgatataatgtt 308  Q
     ||||| |||||| ||| |||||||||||||| |||||||||||||||||||||| |||||| ||||||| || |||||||||||||||||||||||    
T  10589287 gacctttgggtaggattaagacttaatgatgaggttaattataatctgtgaagctatttaagatgtgttgttgctgattatgatgtgatataatgtt 10589191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 28504962 - 28505106
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |  ||    
T  28504962 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaa 28505061  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||||| |||||||||| | |||||||||||||||||||||||||    
T  28505062 tctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 28505106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 12756378 - 12756601
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |    || |||||| ||||||| | ||    
T  12756378 ccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggattatttaagaatg-aactttttggaa 12756476  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttg-ttaggattttgcgatttgtgtcgcacaagt 199  Q
     ||||||||||||| ||| | |||| |||||||||||||||||||||  ||||   ||| |  |||||| ||||||||||||||| | |||||||| |||    
T  12756477 gctgacctgaactcaccatggcgagtagaggctctcgcctcgcgagttgcccaattaca-aaagccttgtttaggattttgcgatctttgtcgcacgagt 12756575  T
Q  200 tgttaagagttgaaccttggggtagt 225  Q
     ||| |||||||||||||||||||||    
T  12756576 cgttgagagttgaaccttggggtagt 12756601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 15754548 - 15754689
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatg-aaacttttggaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| | |||||||| |||||||||  |    
T  15754548 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaagtagaatgagattgaacctggaaaaacttagaatgaaaacttttgaga 15754647  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcg 142  Q
    |||||||| ||||| |||||| |||||| ||||||||||||||    
T  15754648 atctgacc-gaacttgccacggcgagcataggctctcgcctcg 15754689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 18302638 - 18302494
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||  |||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| |  ||    
T  18302638 ccttagatgcccttgagtgcctgaacatgtctaatatttattaggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggataa 18302539  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||| |||||||||||| | |||||||||||||||||||||||||    
T  18302538 tctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 18302494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 39267307 - 39267447
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| |  ||    
T  39267307 ccttatatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggagaa 39267406  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcg 142  Q
    ||||| |||||||||||| | |||||||||||||||||||||    
T  39267407 tctga-ctgaactcgccatggcgagcagaggctctcgcctcg 39267447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 9751211 - 9751442
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||| ||||| ||||||||||||||| |  ||    
T  9751211 ccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgaggttgaacctggaaagacttagaatgaaactttggagaa 9751310  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattt--tgcgatttgtgtcgcacaag 198  Q
    | |||| ||||||||||| |  |||||||||||||||||||||||| |     |  ||||| |||||||||  | ||   |||||| | |||||||| ||    
T  9751311 tttgac-tgaactcgccatggtgagcagaggctctcgcctcgcgagcgcttgtgttacagaatgccttgtttagtttaaatgcgatctttgtcgcacgag 9751409  T
Q  199 ttgttaagagttgaaccttggggtagtattgag 231  Q
    |||||| ||||||||||||||| ||||| ||||    
T  9751410 ttgttatgagttgaaccttgggatagtaatgag 9751442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 34201243 - 34201099
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||| ||||||||||||||||||||| | |||||||| ||||||||||||||||||| ||||| ||||||||||| ||| |  ||    
T  34201243 ccttagatgcttttgagtgtctgaacatgtctaataatgatcaagaaagaatttagaatgagattgaacctgtaaagacttagaatgaaaatttggagaa 34201144  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||| |||||||||||| | |||||||||||||| ||||||||||    
T  34201143 tctga-ctgaactcgccatggcgagcagaggctcttgcctcgcgag 34201099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 2831967 - 2832110
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||  ||||| |||||||| |||||| |  ||    
T  2831967 ccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctagaaagacttagaatg-aactttggagaa 2832065  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||| |||||||| ||| | |||||||||||||||||||||||||    
T  2832066 tctga-ctgaactcaccatggcgagcagaggctctcgcctcgcgag 2832110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 3 - 347
Target Start/End: Original strand, 2279781 - 2280126
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaa-agatttagaatgaaacttttggaaat 101  Q
    ||||||| |||||||||||||||||||  ||||||||||||||||||| | |||| |||||||||||||| || || || |||||| |  ||||||   |    
T  2279781 ttagatgattttgagtgcctgaacatgcataataatgattaggaaagattttagattgagattgaacctgtaatagtttaagaatggat-ttttgggtgt 2279879  T
Q  102 ctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagttg 201  Q
       ||||||||||||||   |||| |||||| ||||||||||||||  || ||  | ||| ||| |  ||||||||||||||| | |||| ||| |||||    
T  2279880 tacacctgaactcgccatagcgagtagaggccctcgcctcgcgagttgcctagttatagaatgcttgtttaggattttgcgatctttgtcacacgagttg 2279979  T
Q  202 ttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtt-taagttgtgttggtgttgattatgatgtgat 300  Q
    || |||||||||||||||||| ||| |||   ||| | ||||| | ||| || ||||||||||||||| |||| ||  ||| ||||| |||| |||||||    
T  2279980 ttgagagttgaaccttggggtcgtaatgaagattatttatgatatcaatgatgatctgtgaagctgttataagatgatttgatgttgtttataatgtgat 2280079  T
Q  301 ataatgttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    ||||| ||||| | |||| |||||||||  ||| ||| |||||||||    
T  2280080 ataattttatatgtattatttgaattatatatgaatatttgagatgt 2280126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 3 - 226
Target Start/End: Original strand, 12255454 - 12255677
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct-gaaaagatttagaatgaaacttttggaaat 101  Q
    ||||||| |||||||||| ||||||||| ||||||||||||||||||| | |||| ||||||||||||| ||| || || |||||| || |||||| | |    
T  12255454 ttagatgattttgagtgcttgaacatgtataataatgattaggaaagattctagattgagattgaacctggaatagtttaagaatg-aatttttgggagt 12255552  T
Q  102 ctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagttg 201  Q
       ||||||||||||||   |||| |||||||||||||||||||||  |||||  ||||| ||| |  ||||||||||||||| | |||| ||| |||||    
T  12255553 tacacctgaactcgccatagcgagtagaggctctcgcctcgcgagtttcccagttacagaatgcttgtttaggattttgcgatctttgtcacacgagttg 12255652  T
Q  202 ttaagagttgaaccttggggtagta 226  Q
    || |||||||||  |||||||||||    
T  12255653 ttgagagttgaattttggggtagta 12255677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 810790 - 810936
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaag-atttagaatgaaacttttggaa 99  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||| || ||||| |||||||||||| |||| ||||||||||||  |||  |||    
T  810790 ccttagatgtttttgagtgcctgaacatatctaataatgattaggaaagattggagaataagattgaacctggaaagaatttagaatgaatttttgtgaa 810889  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
     | | |||||||||||||| | |||| |||||||||||||||||||||    
T  810890 ctgt-acctgaactcgccatggcgagtagaggctctcgcctcgcgagt 810936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 2 - 146
Target Start/End: Complemental strand, 44014633 - 44014489
Alignment:
Q  2 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaaa 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||| ||||||||| || |||||  |     
T  44014633 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatg-aatttttgttag 44014535  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    |   |||||||||||||| |  ||| ||||||||||||||||||||    
T  44014534 ttgcacctgaactcgccatggtgagtagaggctctcgcctcgcgag 44014489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 246 - 324
Target Start/End: Original strand, 18456319 - 18456397
Alignment:
Q  246 ttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgatataatgttatacgcattacttgaa 324  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||  ||||||||||||    
T  18456319 ttaattataatctgtgaagctgtttaagatgtgttgatgttgattatgatgtgatataatgttatgtgcattacttgaa 18456397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 22073376 - 22073203
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct-gaaaagatttagaatgaaacttttggaa 99  Q
    ||||||| | |||||||||||||||||||| ||||||||||||| ||||| | |||||||||||||||||| ||| || || ||||||  | |||||| |    
T  22073376 ccttagaggtttttgagtgcctgaacatgtgtaataatgattagaaaagattctagaatgagattgaacctagaatagtttaagaatg-gatttttggga 22073278  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttagg 174  Q
     |   |||||||||||||| | |||| |||||| |||||||||||||| ||||||  ||||| ||| ||||||||    
T  22073277 gttacacctgaactcgccatggcgagtagaggccctcgcctcgcgagttacccagttacagaatgctttgttagg 22073203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 174
Target Start/End: Complemental strand, 16056778 - 16056615
Alignment:
Q  11 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaa-agatttagaatgaaacttttggaaatctgacctg 109  Q
    ||||| || ||||||||||| ||||||||| ||||||||| | |||| |||||||||||||| || || || |||||| |  |||||| |||   |||||    
T  16056778 ttttgtgtacctgaacatgtataataatgaataggaaagattttagattgagattgaacctggaatagtttaagaatggat-ttttgggaattacacctg 16056680  T
Q  110 aactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttagg 174  Q
    |||||||||   |||| ||||||||||||||||||||| ||||||  ||||| ||||||||||||    
T  16056679 aactcgccatagcgagtagaggctctcgcctcgcgagttacccagttacagaatgccttgttagg 16056615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 47832268 - 47832201
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaa 68  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| || ||| | ||||||||    
T  47832268 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattaagattgaa 47832201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 68206 - 68036
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||| ||| ||| ||||||||||| |||||||||||||||||||||||| || ||| |||||||||||||| ||  |||||  |  |||||| ||| |     
T  68206 ccttaaatgttttcgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaataatttaagaacaaacttgtgggag 68107  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtt 171  Q
    |   |  ||||||||||| | |||| ||||||||||||||||||||  | ||||  ||||| |||||||||    
T  68106 ttacagatgaactcgccatggcgagtagaggctctcgcctcgcgagctaaccagttacagaatgccttgtt 68036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 11995719 - 11995768
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaga 50  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11995719 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaaga 11995768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 347
Target Start/End: Original strand, 19649317 - 19649492
Alignment:
Q  172 aggattttgcgatttgtgtcgcacaagttgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgttta 271  Q
    ||||| ||||||| ||||||||| || ||| | |||| || ||| | ||||||||||||||| |||    || ||||| |  |||||||||||| ||| |    
T  19649317 aggatattgcgatctgtgtcgcataatttgattagagatggacccttgggtagtattgagacctaaattagaagttaactgcaatctgtgaagcagtt-a 19649415  T
Q  272 agttgtgttggtgttgattatgatgtgatataatg-ttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    |||  |||| ||||||| ||||||||||||||||| |||   ||||||||||||||||||||| || ||||||||||    
T  19649416 agtgatgttagtgttgaatatgatgtgatataatgattaattgcattacttgaattatgaatgaatgattgagatgt 19649492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 16219377 - 16219523
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct-gaaaagatttagaatgaaacttttggaa 99  Q
    ||||||||| ||||||||| || ||| ||| ||||||||||||||||||| | |||| ||||||||||||| ||| || || |||||| || |||||| |    
T  16219377 ccttagatgtttttgagtgtctaaacttgtataataatgattaggaaagattttagattgagattgaacctggaatagtttaagaatg-aatttttggga 16219475  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
     |   || ||||||||||| | |||| |||||| ||||||||||||||    
T  16219476 gttacacgtgaactcgccatggcgagtagaggccctcgcctcgcgagt 16219523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 16324456 - 16324395
Alignment:
Q  11 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    |||||||||| ||||||||||||||||||||||||||||| || ||  ||||||||||||||    
T  16324456 ttttgagtgcttgaacatgtctaataatgattaggaaagattggagtttgagattgaacctg 16324395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 18006101 - 18006052
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaga 50  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  18006101 ccttagatgtttttgagtgcctgaacatgtctaataatgattatgaaaga 18006052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 2529638 - 2529710
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctga 73  Q
    ||||||||| ||||||||||||||| |||| |||||||||||||| |||  | |||| |||||||| ||||||    
T  2529638 ccttagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattggacctga 2529710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 14045281 - 14045213
Alignment:
Q  4 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    |||||| ||||||||||||||| |||| |||||||||||||| |||  | |||| ||||||||||||||    
T  14045281 tagatgtttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctg 14045213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 14355311 - 14355243
Alignment:
Q  4 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    |||||| ||||||||||||||| |||| |||||||||||||| |||  | |||| ||||||||||||||    
T  14355311 tagatgtttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctg 14355243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 21064823 - 21064891
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||||| || |||| ||||||||||||  |||||||||||||||| | | ||||||||||||||||    
T  21064823 ccttagatgtttatgagggcctgaacatgtacaataatgattaggaaatattttagaatgagattgaac 21064891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 9389356 - 9389427
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    |||| |||| ||||||||| ||| || ||| |||| |||||||||||||| |||||| ||||||||||||||    
T  9389356 ccttggatgtttttgagtgtctggacttgtataatgatgattaggaaagattgtagattgagattgaacctg 9389427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 9177252 - 9177318
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||| |||||||||||||||||||| ||| |||||||||| |||  | |||| |||||||||||    
T  9177252 ttagatgtttttgagtgcctgaacatgtataagaatgattaggtaagtttttagattgagattgaac 9177318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 12901852 - 12901794
Alignment:
Q  14 tgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||||||||||| |||||||||||||| |||  | |||| ||||||||||||||    
T  12901852 tgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctg 12901794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 122 - 328
Target Start/End: Original strand, 15008279 - 15008487
Alignment:
Q  122 cgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtt-aggattttgcgatttgtgtcgcacaagttgttaagagttgaaccttggg 220  Q
    |||| |||||||||||||||||||||  |||||    ||| | ||||||| ||| ||||||||| | |||||||| || ||||| |||||||||||| |     
T  15008279 cgagtagaggctctcgcctcgcgagttgcccagttgtagaataccttgtttagggttttgcgatctttgtcgcacgagatgttatgagttgaaccttcga 15008378  T
Q  221 gta-gtattgagacttaatgatgatgttaattataatctgtgaagctgtt-taagttgtgttggtgttgattatgatgtgatataatgttatacgcatta 318  Q
    ||| | || |||  |  || ||||| ||||| |||||||||||||||||| |||| ||  ||| ||||| | || |||||||||| |  |||| ||||||    
T  15008379 gtatgaatggaggttgtat-atgatattaatgataatctgtgaagctgttataagatgatttgatgttgttaataatgtgatatatttgtatatgcatta 15008477  T
Q  319 cttgaattat 328  Q
    ||||||||||    
T  15008478 cttgaattat 15008487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 1867650 - 1867718
Alignment:
Q  4 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    |||||| |||| |||||||||| |||| |||||||||||||| |||  | |||| ||||||||||||||    
T  1867650 tagatgttttttagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctg 1867718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 146
Target Start/End: Original strand, 11995764 - 11995835
Alignment:
Q  74 aaagatttagaatgaaacttttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||| ||||||||||| ||| |  |||||||| ||||||||||| | | |||||||||||||||||||||||    
T  11995764 aaagacttagaatgaaaatttggagaatctgac-tgaactcgccatggcaagcagaggctctcgcctcgcgag 11995835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 297
Target Start/End: Complemental strand, 48273594 - 48273542
Alignment:
Q  246 ttaattataatctgtgaagctgttt-aagttgtgttggtgttgattatgatgt 297  Q
    ||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||    
T  48273594 ttaatgataatctgtgaagctgttttaagatgtgttgatgttgattatgatgt 48273542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 14036731 - 14036664
Alignment:
Q  4 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||||| ||||||||||||||| ||||  ||||||||||||| |||  | |||| |||||||||||||    
T  14036731 tagatgtttttgagtgcctgaatatgtaaaataatgattaggcaagtttttagattgagattgaacct 14036664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 14346761 - 14346694
Alignment:
Q  4 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||||| ||||||||||||||| ||||  ||||||||||||| |||  | |||| |||||||||||||    
T  14346761 tagatgtttttgagtgcctgaatatgtaaaataatgattaggcaagtttttagattgagattgaacct 14346694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 14953619 - 14953560
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  14953619 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 14953560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 14959585 - 14959526
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  14959585 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 14959526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 26420399 - 26420340
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  26420399 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 26420340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 44408043 - 44408102
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  44408043 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 44408102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 11768526 - 11768568
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 45  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||    
T  11768526 ttagatgattttgagtgcctgaacatgtataagaatgattagg 11768568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 17017054 - 17017120
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||| ||||||||||||||| ||||  ||||||||||||| |||  | |||| |||||||||||    
T  17017054 ttagatgattttgagtgcctgaatatgtacaataatgattaggcaagtttttagattgagattgaac 17017120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 224
Target Start/End: Original strand, 17017297 - 17017351
Alignment:
Q  170 ttaggattttgcgatttgtgtcgcacaagttgttaagagttgaaccttggggtag 224  Q
    ||||| ||||||||| | ||||||||||| ||||| ||||||| |||||||||||    
T  17017297 ttagggttttgcgatctttgtcgcacaagatgttatgagttgatccttggggtag 17017351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 346
Target Start/End: Complemental strand, 24054651 - 24054581
Alignment:
Q  277 tgttggtgttgattatgatgtgatataatg-ttatacgcattacttgaattatgaatgtataattgagatg 346  Q
    |||| ||||||||||||||||||||| ||| ||| |  |||||||||||||||||||| |  |||||||||    
T  24054651 tgttagtgttgattatgatgtgatatgatgtttaaatacattacttgaattatgaatgaaagattgagatg 24054581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 11547953 - 11548010
Alignment:
Q  14 tgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  11547953 tgagtgcctgaacatacctagtaatgattaggaatgaatgtaggaaaagattgaacct 11548010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 11554549 - 11554606
Alignment:
Q  14 tgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  11554549 tgagtgcctgaacatacctagtaatgattaggaatgaatgtaggaaaagattgaacct 11554606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 15008107 - 15008148
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattag 44  Q
    ||||||| || ||||||||||||||||| |||||||||||||    
T  15008107 ttagatgattctgagtgcctgaacatgtataataatgattag 15008148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 347
Target Start/End: Original strand, 18154779 - 18154844
Alignment:
Q  283 tgttgattatgatgtgatataatgttatac-gcattacttgaattatgaatgtataattgagatgt 347  Q
    |||||| ||||||| |||||||||||  |  ||||||||||||||||||||| || ||||||||||    
T  18154779 tgttgaatatgatgcgatataatgtttaattgcattacttgaattatgaatgaatgattgagatgt 18154844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 20702664 - 20702733
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  20702664 ccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 20702733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 32768107 - 32768038
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  32768107 ccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 32768038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 11238655 - 11238699
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtag 56  Q
    |||||||||||||||||| ||| || |||||||||| ||||||||    
T  11238655 tttgagtgcctgaacatgcctagtattgattaggaatgaatgtag 11238699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 240; Significance: 1e-133; HSPs: 2)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 39219 - 38897
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||      
T  39219 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattttgaatgaaacttgtggat- 39121  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||  | ||| |||| ||||    
T  39120 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacatagtgacttgttaggtttttgcgacctttgttgcacgagtt 39021  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  39020 gttgagagttgaaccttggggtagtattaagacttaatgatgatgttaattataatctgtgaagctgtttaagatgtgttgatgttgattatgatgtgat 38921  T
Q  301 ataatgttatacgcattacttgaa 324  Q
    ||||||||||  ||||||||||||    
T  38920 ataatgttatgtgcattacttgaa 38897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 244 - 324
Target Start/End: Complemental strand, 33158 - 33078
Alignment:
Q  244 tgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgatataatgttatacgcattacttgaa 324  Q
    |||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||  ||||||||||||    
T  33158 tgttgattataatctgtgaagctgtttaagatgtgttgatgttgattatgatgtgatataatgttatgtgcattacttgaa 33078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 240; Significance: 1e-133; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 347
Target Start/End: Complemental strand, 23660482 - 23660136
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattt-agaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  23660482 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaacttttggaa 23660383  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||  | | | |||| |||    
T  23660382 -tctgacctgaactcgccacggcgagcagaggctctcgcctcgtgagtgacccagaaacagagtgccttgttaggtttttgtgacctttattgcacgagt 23660284  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    | || |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||| ||||||| |||||||||||||||||    
T  23660283 tattgagagttgaaccttggggtagtattgagacttattgatgatgttaattataatttgtaaagctgtttaagatgtgttgatgttgattatgatgtga 23660184  T
Q  300 tataatgttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    |||||||||||||||||||||||| |||||| || ||| || ||||||    
T  23660183 tataatgttatacgcattacttgagttatgattgaatatttaagatgt 23660136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 347
Target Start/End: Complemental strand, 22337575 - 22337229
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||      
T  22337575 ccttagatgcttttgagtgtatgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagatttagaatgaaactttttgagt 22337476  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    ||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||| | ||||||||| ||||| ||  | ||| |||| ||||    
T  22337475 tctgacctgaattcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttgttaggtttttgtgacctttgttgcacgagtt 22337376  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||| |||||||| | ||||| ||||||||||||||||||    
T  22337375 gttgagagttgaaccttggagtagtattaagacttaatgatgatgttaattataatttgtgaagttgtttaagatatgttgatgttgattatgatgtgat 22337276  T
Q  301 ataatgttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||    
T  22337275 ataatgttatacgcattacttgaattatgaatgtatatttgagatgt 22337229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 23076900 - 23076579
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||| ||||     
T  23076900 ccttagatgcttttgagtgcctgaacatgtctaataataattaggaaagaatgtaggatgagattggacctggaaagatttagaatgaaacttt-ggaat 23076802  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||  | ||| |||| ||||    
T  23076801 tctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagttacccagaaacagagtgccttgttagg-ttttgcgacctttgttgcacgagtt 23076703  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||| |||||||||| |||||||||||||| || || ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  23076702 gttgagagttgaactttggggtagtattgggattttatgatgatgttaattataatctgtgaagctgtttaagctgtgttgatgttgattatgatgtgat 23076603  T
Q  301 ataatgttatacgcattacttgaa 324  Q
    ||||||||||  ||||||||||||    
T  23076602 ataatgttatgtgcattacttgaa 23076579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 324
Target Start/End: Original strand, 22737841 - 22738164
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||  ||||||| ||||||||||||| ||| |    
T  22737841 ccttagatgcttttgagtgcctgaacatatctaataatgattaggaaagaatgtaggatgagattgaacctagaaagattgtagaatgaaacttgtggga 22737940  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     ||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||  | ||| |||| |||    
T  22737941 ttctgaactgaactcgccacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgccttgttagg-ttttgcgacctttgttgcacgagt 22738039  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    |||| ||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  22738040 tgttgagaattgaaccttggggtagtattaagacttaatgaggatgttaattataatctgtgaagctgtttaagatgtgttgatgttgattatgatgtga 22738139  T
Q  300 tataatgttatacgcattacttgaa 324  Q
    |||||||||||  ||||||||||||    
T  22738140 tataatgttatgtgcattacttgaa 22738164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 1 - 324
Target Start/End: Original strand, 22730894 - 22731218
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| ||| |    
T  22730894 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtggga 22730993  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     ||||||||||||||||||||  ||||| ||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||| | ||| |||| ||     
T  22730994 ttctgacctgaactcgccacggggagcaaaggctctcgcctcacgagtcacccagaaacagagtgccttgttagg-ttttgcgatctttgttgcacgagc 22731092  T
Q  200 tgttaagagttgaaccttgggg-tagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtg 298  Q
    |||| | | ||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  22731093 tgttgataattgaaccttgggggtagtattaagacttaatgaggatgttaattataatctgtgaagctgtttaagatgtgttgatgttgattatgatgtg 22731192  T
Q  299 atataatgttatacgcattacttgaa 324  Q
    ||||||||||||  ||||||||||||    
T  22731193 atataatgttatgtgcattacttgaa 22731218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 27754035 - 27753730
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| ||| |    
T  27754035 ccttagatgcttttgagtgcctcaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtggga 27753936  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||  |  || |||| |||    
T  27753935 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcaagtgacccagaaacagagtgccttgtta-gattttgcgaccttcgttgcacgagt 27753837  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    |||  ||||||||| |||||| ||| ||| ||||||||||||||||||||||||||| |||||| ||||||||| ||||||| |||||||||||||||||    
T  27753836 tgtcgagagttgaagcttgggatagcattaagacttaatgatgatgttaattataatatgtgaaactgtttaagatgtgttgatgttgattatgatgtga 27753737  T
Q  300 tataatg 306  Q
    |||||||    
T  27753736 tataatg 27753730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 323
Target Start/End: Original strand, 298476 - 298797
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||| ||| |     
T  298476 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatataggatgagattgaacctggaaagatttagaatgaaacttgtgggat 298575  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||  | ||| |||| ||||    
T  298576 tctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgcacgagtt 298674  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||| ||  || |||||| |||||| ||| ||||||||||| || ||||| |||||| ||||||||||| |||| ||||||| | || |||||||||||||    
T  298675 gttgaggattaaacctttgggtagcattaagacttaatgaagaggttaactataatatgtgaagctgtataagatgtgttgttattaattatgatgtgat 298774  T
Q  301 ataatgttatacgcattacttga 323  Q
    |||||||| || |||||||||||    
T  298775 ataatgttttatgcattacttga 298797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 23286310 - 23285998
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||          |||||||| || ||  |     
T  23286310 ccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacatg----------gaatgaaaattgtgagat 23286221  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    | |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||  | ||| |||  ||||    
T  23286220 tatgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacttgttag-attttgcgacctttgttgcatgagtt 23286122  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||| ||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  23286121 gttgagagttgaacctttgggtagtattaagacttaatgaagatgttaattataatctgtgaagctgtttaagatgtgttgttgttgattatgatgtgat 23286022  T
Q  301 ataatgttatacgcattacttgaa 324  Q
    |||||||| || ||||||||||||    
T  23286021 ataatgttttatgcattacttgaa 23285998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 346
Target Start/End: Original strand, 32451590 - 32451934
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||| || ||||||| ||||||||||||| ||| |    
T  32451590 ccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacatggaaagattgtagaatgaaacttgtggga 32451689  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||  | ||| |||| |||    
T  32451690 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgcacgagt 32451788  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttga-ttatgatgtg 298  Q
    |||  |||| ||||||||||||||| ||| |||||| |  ||||| ||||||| ||| |||||||||| ||| |   ||||  |||||| ||||||||||    
T  32451789 tgtcgagagatgaaccttggggtagcattaagacttgaatatgatattaattacaatttgtgaagctg-ttatgggatgttaatgttgatttatgatgtg 32451887  T
Q  299 atataatgttatacgcattacttgaattatgaatgtataattgagatg 346  Q
    |||| ||| ||||||||||||||||| | | |||| ||||||||||||    
T  32451888 atattatg-tatacgcattacttgaagtttaaatgaataattgagatg 32451934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 324
Target Start/End: Original strand, 37788 - 38099
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||          |||| |||||| ||  |     
T  37788 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaagatgtaggatgagattgaacctg----------gaattaaacttgtgagat 37877  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    ||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||| |||||||| | |||||||  | ||| |||| ||||    
T  37878 tctaacctgaactcgccacggcgagcagaggctctcgcctcgcgagcgacccagaaacatagtgacttgttag-actttgcgacctttgttgcacgagtt 37976  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||  ||||||||||||| |||||| ||| ||||||||  |||| |||||||||||||| ||||||||| ||||   ||||| ||||||||||||||||||    
T  37977 gtcgagagttgaacctttgggtaggattaagacttaacaatgaggttaattataatctctgaagctgtataagacatgttgttgttgattatgatgtgat 38076  T
Q  301 ataatgttatacgcattacttgaa 324  Q
    |||||||| || ||||||||||||    
T  38077 ataatgtt-tatgcattacttgaa 38099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 323
Target Start/End: Original strand, 23654071 - 23654369
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||          |||| ||||| |||| |     
T  23654071 ccttagatgcttttgactgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaattaaactgttgggat 23654160  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||| ||||||||||||| ||||||             |||||||||||||||||||||||| |||||||| |||||||||  | ||| |||| ||||    
T  23654161 tctgacttgaactcgccacggcgagca-------------cgcgagtgacccagaaacagagtgacttgttag-attttgcgacctttgttgcacgagtt 23654246  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||  ||||||||||||| |||||| ||| ||||||||||| || ||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||    
T  23654247 gtcgagagttgaacctttgggtagcattaagacttaatgaagaggttaattataatctgtgaagctgtttaagatgtgttgttgttaattatgatgtgat 23654346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 20309554 - 20309243
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||| ||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||          |||| |||||| ||| |     
T  20309554 ccttatatgcttttgagtgcctggatatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaattaaacttgtgggat 20309465  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||    ||| |||| | ||    
T  20309464 tctgacctgaactcgccacggtgagcagaggctctcgcctcgcgagtgacccagaaacaaagtgacttgtta-gattttgcgacccttgttgcacgattt 20309366  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||  ||||||||||| | |||||| ||| ||||||||  |||| ||||| |||||||||||||||||  |||| | ||||| |||||||||||||||| |    
T  20309365 gtcgagagttgaacccttgggtaggattaagacttaagaatgaggttaactataatctgtgaagctgaataagatatgttgttgttgattatgatgtgtt 20309266  T
Q  301 ataatgttatacgcattacttgaa 324  Q
    |||||||| || ||||||||||||    
T  20309265 ataatgtt-tatgcattacttgaa 20309243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 23071624 - 23071768
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |  ||    
T  23071624 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaa 23071723  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||||| |||||||||| | |||||||||||||||||||||||||    
T  23071724 tctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 23071768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 156 - 324
Target Start/End: Complemental strand, 23060815 - 23060650
Alignment:
Q  156 aacagagtgccttgttaggattttgcgatttgtgtcgcacaagttgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataa 255  Q
    ||||||||||||||||||| ||||||||  | |||  ||| ||||||| ||| |||||| |||||||||||||| |||||||||||||||||||||||||    
T  23060815 aacagagtgccttgttagg-ttttgcgacctttgtt-cacgagttgttgagaattgaactttggggtagtattgggacttaatgatgatgttaattataa 23060718  T
Q  256 tctgtgaagctgtttaagttgtgttggtgttgattatgatgtgatataatgttatacgcattacttgaa 324  Q
    | |||||||||||||||| ||||||| ||||||||||||||||||||||||||||  ||||||||||||    
T  23060717 t-tgtgaagctgtttaagatgtgttgatgttgattatgatgtgatataatgttatgtgcattacttgaa 23060650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 22133878 - 22134020
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||   |||| |||||||||||  |||||  |    
T  22133878 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctaggaagactttagaatgaa--ttttgtga 22133975  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcga 145  Q
    | |||| |||||||||||| | ||||||||||||||||||||||||    
T  22133976 a-ctgaactgaactcgccatggcgagcagaggctctcgcctcgcga 22134020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 3 - 328
Target Start/End: Original strand, 23708282 - 23708607
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaatc 102  Q
    ||||||| ||||||||| |||||||| | || |||||||||||||||   ||||| |||||||||| | ||| || || |||||| |  |||||| | |     
T  23708282 ttagatgtttttgagtgtctgaacatatgtattaatgattaggaaagttcgtagattgagattgaatcggaatagtttaagaatggat-ttttgggagtt 23708380  T
Q  103 tgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagttgt 202  Q
      ||||||||||||||   |||| |||||||||||||| |||||| ||||||  ||||| ||| |  ||||||||||||||| | |||||||| ||||||    
T  23708381 acacctgaactcgccatagcgagtagaggctctcgccttgcgagttacccagttacagaatgcttgtttaggattttgcgatctttgtcgcacgagttgt 23708480  T
Q  203 taagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtt-taagttgtgttggtgttgattatgatgtgata 301  Q
    | | |||||||||||||||| ||| |||   ||  | ||||| ||||| || ||||||||||||||| |||| ||  ||| ||||| |||| ||||||||    
T  23708481 tgatagttgaaccttggggtcgtaatgaagattgtttatgatattaatgatgatctgtgaagctgttataagatgaattgatgttgtttataatgtgata 23708580  T
Q  302 taatgttatacgcattacttgaattat 328  Q
    ||||  |||| ||||||||||||||||    
T  23708581 taattgtatatgcattacttgaattat 23708607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 4 - 143
Target Start/End: Complemental strand, 28406436 - 28406297
Alignment:
Q  4 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaaatc 102  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||| ||||| |||||||| ||| |||  |||  |    
T  28406436 tagatgcttttgagtgcctgaacatgtctaataataattaggaaagattggagaatgagattgaacctgtaaagattttagaataaaattttgtgaa--c 28406339  T
Q  103 tg-acctgaactcgccacgacgagcagaggctctcgcctcgc 143  Q
    || |||||||||||||| | |||| |||||||||||||||||    
T  28406338 tgaacctgaactcgccatggcgagtagaggctctcgcctcgc 28406297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 28291963 - 28292027
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagatt 65  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  28291963 ccttagatgcttttgagtgcctgaacatgtctaagaatgattaggaaagaatgtagaatgagatt 28292027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 25176302 - 25176231
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||  || ||| ||||||||||||||    
T  25176302 ccttagatgtttttgagtgcctgaacatgtctaattatgattaggaaaggttggagattgagattgaacctg 25176231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 23207812 - 23207744
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    ||||||| || ||||||||||||||||| |||||||||||||| |||  | |||| |||||||||||||    
T  23207812 ttagatgattatgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacct 23207744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 328
Target Start/End: Complemental strand, 19672118 - 19671962
Alignment:
Q  170 ttaggattttgcgatttgtgtcgcacaagttgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctg-t 268  Q
    ||||||||||||||| | |||||||| ||||||| ||||||||||||| |||||||  |||   ||| | || || ||||| |||||||||||||||| |    
T  19672118 ttaggattttgcgatctttgtcgcacgagttgttgagagttgaacctt-gggtagttatgaatattatttataatattaatgataatctgtgaagctgat 19672020  T
Q  269 ttaagttgtgttggtgttgattatgatgtgatataatgttatacgcattacttgaattat 328  Q
     || | ||  ||| ||||| |||| ||||||||||||  |||| ||||||||||||||||    
T  19672019 ctatgatg-attgatgttg-ttataatgtgatataattgtatatgcattacttgaattat 19671962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 39827602 - 39827648
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaag 49  Q
    ||||||| ||||||||||||||| |||| ||||||||||||||||||    
T  39827602 ttagatgattttgagtgcctgaatatgtataataatgattaggaaag 39827648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 22412722 - 22412791
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| || ||||||||||||||||| | |||||||||||| |||  | |||| ||||||||||||||    
T  22412722 ttagatgattctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 22412791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 283 - 347
Target Start/End: Original strand, 22758658 - 22758723
Alignment:
Q  283 tgttgattatgatgtgatataatg-ttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    |||||| ||||||||||||||||| |||   ||||||||||||||||||||| || ||||||||||    
T  22758658 tgttgaatatgatgtgatataatgattaattgcattacttgaattatgaatgaatgattgagatgt 22758723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 22740716 - 22740768
Alignment:
Q  94 ttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    |||| |||||| | ||||||||||||| |||||||| ||||||||||||||||    
T  22740716 ttgggaatctggcttgaactcgccacggcgagcagatgctctcgcctcgcgag 22740768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 20519790 - 20519845
Alignment:
Q  14 tgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||||||||||||| |||||||||||||| |||  | |||| |||||||||||    
T  20519790 tgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaac 20519845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 24503532 - 24503473
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  24503532 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 24503473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 12829492 - 12829434
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  12829492 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 12829434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 18786471 - 18786541
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctga 73  Q
    ||||||| ||||||||||||||||| || || || |||||||| |||  | |||| |||||||||||||||    
T  18786471 ttagatgattttgagtgcctgaacacgtatattattgattaggcaagtttttagattgagattgaacctga 18786541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 23005263 - 23005197
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||| |||||||||||||||||||| ||| |||||||||| |||  | | || |||||||||||    
T  23005263 ttagatgtttttgagtgcctgaacatgtataagaatgattaggcaagttttttgattgagattgaac 23005197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 34137454 - 34137412
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 45  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||    
T  34137454 ttagatggttttgagtgcctgaacatgtataagaatgattagg 34137412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 347
Target Start/End: Original strand, 22740903 - 22740968
Alignment:
Q  283 tgttgattatgatgtgatataatg-ttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    |||||| ||||||||||||||||| |||   ||||||||||||||||||||| || ||| ||||||    
T  22740903 tgttgaatatgatgtgatataatgattaattgcattacttgaattatgaatgaatgattaagatgt 22740968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 23171460 - 23171416
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtag 56  Q
    |||||||||||||||||| ||| || |||||||||| ||||||||    
T  23171460 tttgagtgcctgaacatgcctagtattgattaggaatgaatgtag 23171416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 23582717 - 23582673
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtag 56  Q
    |||||||||||||||||| ||| || |||||||||| ||||||||    
T  23582717 tttgagtgcctgaacatgcctagtattgattaggaatgaatgtag 23582673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 347
Target Start/End: Original strand, 339612 - 339957
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    ||||| |||||||||||||||||||  |||||||||||||||||||| |||||||| ||||||||||||||| ||||||| ||||||||| ||||||| |    
T  339612 ccttaaatgcttttgagtgcctgaatttgtctaataatgattaggaatgaatgtaggatgagattgaacctggaaagattgtagaatgaa-cttttggga 339710  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||  | ||| |||| |||    
T  339711 atctgacatgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaatagagtgccttgttagg-ttttgcgacctttgttgcacgagt 339809  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
     |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  339810 cgttaagggttgaaccttggggtagtattgagacttaatgatgacgttaattataatctgtgaagctgtttaagatgtgttgatgttgattatgatgtga 339909  T
Q  300 tataatgttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||    
T  339910 tataatgttatacacattacttgaattatgaatgtatacttgagatgt 339957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 221; Significance: 1e-121; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 52372 - 52050
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| ||| |    
T  52372 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtggga 52273  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||  | ||| |||| |||    
T  52272 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaactgagtgtcttgttagg-ttttgcgacct-tgttgcacgagt 52175  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||| |||||    
T  52174 tgttgagagttgaaccttggggtagtattaagacttaatgatgatgttaattataatctgtgaagctgtttaagatgtgttgatgtagattatgttgtga 52075  T
Q  300 tataatgttatacgcattacttgaa 324  Q
    |||||||||||  ||||||||||||    
T  52074 tataatgttatgtgcattacttgaa 52050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 1 - 325
Target Start/End: Original strand, 167651 - 167963
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||          ||| |||||||| ||| |     
T  167651 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttaggatgagattgaacct----------agattgaaacttgtgggat 167740  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||  | ||| |||| | ||    
T  167741 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgcacgaatt 167839  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||  ||||||||||||| |||||| ||| ||||||||||| || |||||||||||||| |||||||||||||| ||||||   |||||||||||||||||    
T  167840 gtcgagagttgaacctttgggtagcattaagacttaatgaagaggttaattataatctttgaagctgtttaagatgtgttttggttgattatgatgtgat 167939  T
Q  301 ataatgttatacgcattacttgaat 325  Q
    |||||||| || |||||||||||||    
T  167940 ataatgtt-tatgcattacttgaat 167963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 220; Significance: 1e-121; HSPs: 3)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 68 - 347
Target Start/End: Complemental strand, 28223 - 27944
Alignment:
Q  68 acctgaaaagatttagaatgaaacttttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgcct 167  Q
    ||||| |||||||||||||||||||||| ||| |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  28223 acctggaaagatttagaatgaaactttttgaattctgacctgaactcgccacggcgagcaaaggctctcgcctcgcgagtgacccagaaacagagtgcct 28124  T
Q  168 tgttaggattttgcgatttgtgtcgcacaagttgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctg 267  Q
    ||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||    
T  28123 tgtcaggattttgcaatctgtgtcgcacaagttgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataacctgtgaagttg 28024  T
Q  268 tttaagttgtgttggtgttgattatgatgtgatataatgttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    |||||| | ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  28023 tttaagatttgttgatgttgattatgatgtgatataatgttatatgcattacttgaattatgaatgtatatttgagatgt 27944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 28996 - 28925
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28996 ccttagatgcttttgagttcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 28925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 1368 - 1436
Alignment:
Q  5 agatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctga 73  Q
    ||||| |||||||||||||||||||| || ||||||||||  |||  | |||| |||||||||||||||    
T  1368 agatgattttgagtgcctgaacatgtatattaatgattagacaagtttttagattgagattgaacctga 1436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 89 - 347
Target Start/End: Complemental strand, 39848 - 39590
Alignment:
Q  89 aacttttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgt 188  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  39848 aacttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtcaggattttgcgatctgt 39749  T
Q  189 gtcgcacaagttgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttga 288  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||| ||||||    
T  39748 gtcgcacaagttgttaagggttgaaccttggggtagtattgagacttaataatgatgttaattataatctatgaagctgtttaagatgtgttgatgttga 39649  T
Q  289 ttatgatgtgatataatgttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||    
T  39648 ttatgatgtgatataatgttatgtgcattacttgaattatgaatgtatatttgagatgt 39590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 89 - 347
Target Start/End: Original strand, 74964 - 75222
Alignment:
Q  89 aacttttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgt 188  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  74964 aacttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtcaggattttgcgatctgt 75063  T
Q  189 gtcgcacaagttgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttga 288  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||| ||||||    
T  75064 gtcgcacaagttgttaagggttgaaccttggggtagtattgagacttaataatgatgttaattataatctatgaagctgtttaagatgtgttgatgttga 75163  T
Q  289 ttatgatgtgatataatgttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||    
T  75164 ttatgatgtgatataatgttatgtgcattacttgaattatgaatgtatatttgagatgt 75222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 213; Significance: 1e-117; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 802 - 479
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||| |||||||||||||||||||||    
T  802 ccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctagaaagaatttagaatgaaacttttggaa 703  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     ||||| ||||||||||| || |||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |  | ||| |||  |||    
T  702 -tctgaactgaactcgccgcggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaggtttttgcaacctttgttgcatgagt 604  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||| ||||||| |||||||||||||||||    
T  603 tgttgagagttgaaccttggggtagtattgagacttaatgaggatgttaattataatatatgaagctgtttaagatgtgttgatgttgattatgatgtga 504  T
Q  300 tataatgttatacgcattacttgaa 324  Q
    |||||||||||  ||||||||||||    
T  503 tataatgttatgtgcattacttgaa 479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 3 - 324
Target Start/End: Complemental strand, 3928 - 3607
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaaat 101  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||| |||||| |||||| ||| | |    
T  3928 ttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaatgattgtagaatcaaacttgtgggatt 3829  T
Q  102 ctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagttg 201  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||  |||||||| ||||||||  | ||| |||| |||||    
T  3828 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccaaaaacagagtgagttgttagg-ttttgcgacctttgttgcacgagttg 3730  T
Q  202 ttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgata 301  Q
    || ||| |||||| ||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||    
T  3729 ttgagaattgaactttggggtagtattaagacttaatgaggatgttaattataatctatgaagctgtttaagatgtgttgatgttgattatgatgtgata 3630  T
Q  302 taatgttatacgcattacttgaa 324  Q
    |||||||||  ||||||||||||    
T  3629 taatgttatttgcattacttgaa 3607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 213; Significance: 1e-117; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 13552 - 13229
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||| ||| |    
T  13552 ccttagatgcttttgagtgcctgaacatgtctaattatgattaggaaagaatgtaggatgagattgaatctgaaaagattgtagaatgaaacttgtggga 13453  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||  | ||| |||| |||    
T  13452 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaactgagtgtcttgttagg-ttttgcgacctttgttgcacgagt 13354  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    |||| |||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||| ||||||| ||||||||||| |||||    
T  13353 tgttgagagttgaactttggggtagtattgggacttaatgaagatgttaattataatctgtgaaactgtttaagatgtgttgatgttgattatgttgtga 13254  T
Q  300 tataatgttatacgcattacttgaa 324  Q
    |||||||||||  ||||||||||||    
T  13253 tataatgttatgtgcattacttgaa 13229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 34580 - 34437
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |  ||    
T  34580 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttggagaa 34481  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcga 145  Q
    ||||||| |||||||||| | ||||||||||||||||||||||||    
T  34480 tctgacc-gaactcgccatggcgagcagaggctctcgcctcgcga 34437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 40371 - 40049
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||| || ||||||||||||| |||||||| |||||||||||||||| | |||| ||||||||| |||||||||    
T  40371 ccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaggaatgtaggatgagattgaacctgaca-gattgtagaatgaa-cttttggaa 40274  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||  | ||| |||| |||    
T  40273 atctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtaccttgttaggtgtttgcgacctttgttgcacgagt 40174  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||| |||||||||||||||||    
T  40173 tgttgagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctctttatgatgtgttgatgttgattatgatgtga 40074  T
Q  300 tataatgttatacgcattacttgaa 324  Q
    |||||||||||  ||||||||||||    
T  40073 tataatgttatgtgcattacttgaa 40049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 207; Significance: 1e-113; HSPs: 5)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 125042 - 124722
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||   ||||||| ||||||| ||||||||||||| ||| |    
T  125042 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgag---gaacctggaaagattgtagaatgaaacttgtggga 124946  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||  | ||| |||| |||    
T  124945 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaaaagagtgtcttgttag-attttgcgacctttgttgcacgagt 124847  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    |||  |||||||||||||||| ||| ||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  124846 tgtcgagagttgaaccttgggatagcattaagacttaatgaggatgttaattataatctgtgaagctgtttaagatgtgttgatgttgattatgatgtga 124747  T
Q  300 tataatgttatacgcattacttgaa 324  Q
    |||||||||||| ||||||||||||    
T  124746 tataatgttatatgcattacttgaa 124722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 63021 - 62932
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaa 89  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||| ||| | |||||||||||    
T  63021 ccttagatgtttttgagtgcatgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaatattttagaatgaa 62932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 277 - 347
Target Start/End: Complemental strand, 174949 - 174878
Alignment:
Q  277 tgttggtgttgattatgatgtgatataatgtt-atacgcattacttgaattatgaatgtataattgagatgt 347  Q
    |||| ||||||| ||||| ||||||||||||| |   ||||||||||||||||||||| || ||||||||||    
T  174949 tgttagtgttgaatatgacgtgatataatgtttagttgcattacttgaattatgaatgaatgattgagatgt 174878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 135965 - 136023
Alignment:
Q  14 tgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| ||||||||| |||||||||||||| |||  | |||| ||||||||||||||    
T  135965 tgagtgcttgaacatgtataataatgattaggcaagtttttagattgagattgaacctg 136023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 144673 - 144731
Alignment:
Q  14 tgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| ||||||||| |||||||||||||| |||  | |||| ||||||||||||||    
T  144673 tgagtgcttgaacatgtataataatgattaggcaagtttttagattgagattgaacctg 144731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 201; Significance: 1e-109; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 6 - 324
Target Start/End: Original strand, 8198 - 8517
Alignment:
Q  6 gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaaatctg 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||| ||||    
T  8198 gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttttggaattctg 8297  T
Q  105 acctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagttgtta 204  Q
     ||| |||||||||||  ||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||  |  || |||| |||||||     
T  8298 gcctaaactcgccacggtgagtagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttagg-ttttgcgaccttcgttgcacgagttgttg 8396  T
Q  205 agagttgaaccttgggg-tagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgatata 303  Q
    |||||||||| |||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||    
T  8397 agagttgaacgttgggggtagtattgggacttaatgaggatgttaattataatctgtgaagctgtttaagatgtgttgatgttgattatgttgtgatata 8496  T
Q  304 atgttatacgcattacttgaa 324  Q
    |||||||  ||||||||||||    
T  8497 atgttatgtgcattacttgaa 8517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 23342 - 23019
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||| ||||||| ||||||  || ||||||||    
T  23342 ccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggatctggaaagattgtagaattgaa-ttttggaa 23244  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     ||||| |||| ||||||||  ||||||||||| |||||||||||||||||| |||||||||||| ||||||||| ||||||||  | ||| |||| |||    
T  23243 ttctgaactgagctcgccacagcgagcagaggccctcgcctcgcgagtgacctagaaacagagtgtcttgttaggtttttgcgacctttgttgcacgagt 23144  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||| |||||||    
T  23143 tgttgagagttgaaccttggggtagtattgagacttaatgatgatgttatttataatctgtgaagctgtttaagatgtgttgatgttgattacgatgtga 23044  T
Q  300 tataatgttatacgcattacttgaa 324  Q
    |||||||||||  ||||||||||||    
T  23043 tataatgttatgtgcattacttgaa 23019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 197; Significance: 1e-107; HSPs: 5)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 4 - 347
Target Start/End: Complemental strand, 40313 - 39971
Alignment:
Q  4 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaaatc 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||| |||||||||||||||||   ||    
T  40313 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatggaggatgagattgaacctggaaagattgtagaatgaaacttttggtt-tc 40215  T
Q  103 tgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagttgt 202  Q
    | ||||| |||||||||| ||||||||||||||||||||||| |||||| |||||| ||||||||||||| ||||||||||  | ||| |||||| ||||    
T  40214 taacctgtactcgccacggcgagcagaggctctcgcctcgcgggtgacctagaaaccgagtgccttgttatgattttgcgacctttgttgcacaatttgt 40115  T
Q  203 taagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgatat 302  Q
    | |||||||||||||||| ||| ||||||||||||||| ||||||||||||||| |||||||||||||||| || |||| ||||||||||||||||||||    
T  40114 tgagagttgaaccttggg-tagcattgagacttaatgaggatgttaattataatttgtgaagctgtttaagatgcgttgatgttgattatgatgtgatat 40016  T
Q  303 aatgttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    ||||||| | |||||||||||| ||| | || ||| |||||||||    
T  40015 aatgttaaatgcattacttgaagtataattgaatatttgagatgt 39971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 143 - 347
Target Start/End: Complemental strand, 26213 - 26009
Alignment:
Q  143 cgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagttgttaagagttgaaccttggggtagtattgagacttaatgatg 242  Q
    ||||||||||||||||  |||||||||||||||||||||||  | ||| |||| | ||||| |||||||||||||||||||| ||||||||||||||| |    
T  26213 cgagtgacccagaaaccaagtgccttgttaggattttgcgacctttgttgcacgatttgttgagagttgaaccttggggtagcattgagacttaatgagg 26114  T
Q  243 atgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgatataatgttatacgcattacttgaattatgaatgtataattga 342  Q
    ||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||| | |||||||||||| ||| | || ||| ||||    
T  26113 atgttaattataatctgtgaagctgtttaagatgcgttgatgttgattatgatgtgatataatgttaaatgcattacttgaagtataattgaatatttga 26014  T
Q  343 gatgt 347  Q
    |||||    
T  26013 gatgt 26009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 16 - 146
Target Start/End: Original strand, 59179 - 59308
Alignment:
Q  16 agtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaatctgacctgaactcg 115  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||| |  || |||||| |||||||    
T  59179 agtgcctgaacatgtctaataatgattaggacagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaacctgacc-gaactcg 59277  T
Q  116 ccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||| | |||||||||||||||||||||||||    
T  59278 ccatggcgagcagaggctctcgcctcgcgag 59308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 26662 - 26555
Alignment:
Q  24 aacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaaatctgacctgaactcgccacgac 122  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||| ||||||||||||||||| | ||||||||||| |||||||| |    
T  26662 aacatgtctaataatgattaggaaagaatgtaggatgagattaaacctggaaagattgtagaatgaaacttttgg-attctgacctgaagtcgccacggc 26564  T
Q  123 gagcagagg 131  Q
    |||||||||    
T  26563 gagcagagg 26555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 39592 - 39669
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga 78  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  39592 ccttagatgcttttgagtacctgaacatgtctattaatgattaggaaagaatgtagaatgagattgaacctggaaaga 39669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 197; Significance: 1e-107; HSPs: 4)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 2311 - 1988
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| ||| |    
T  2311 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtggga 2212  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     |||||||||||||||||| | |||| ||||||| ||||||| ||||||||||  ||||||||||||||||||| |||||| ||  | ||| |||| |||    
T  2211 ttctgacctgaactcgccatggcgagtagaggctatcgcctcacgagtgaccctaaaacagagtgccttgttag-attttgtgacctttgttgcacgagt 2113  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    |||  |||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||    
T  2112 tgtcgagagttgaaccttgggatagtattaagacttaatgaggatgttaattataatctgtgaagctatttaagatgtgttgatgttgattatgatgtga 2013  T
Q  300 tataatgttatacgcattacttgaa 324  Q
    |||||||||||  ||||||||||||    
T  2012 tataatgttatgtgcattacttgaa 1988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 207180 - 207324
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||| ||||| ||||||||||||||| |  ||    
T  207180 ccttagatgcctttgagtgcctgaacatgtctaatattgattaggagagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggagaa 207279  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||| |||||||||||| | |||||||||||||||||||||||||    
T  207280 tctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 207324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 119214 - 119280
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||| ||||||||||||||| |||| |||||||||||||  |||  | |||| |||||||||||    
T  119214 ttagatgattttgagtgcctgaatatgtataataatgattagacaagtttttagattgagattgaac 119280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 207359 - 207411
Alignment:
Q  179 tgcgatttgtgtcgcacaagttgttaagagttgaaccttggggtagtattgag 231  Q
    |||||| | |||||||| |||||||| ||||||||||||||| ||||| ||||    
T  207359 tgcgatctttgtcgcacgagttgttatgagttgaaccttgggatagtaatgag 207411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 324
Target Start/End: Original strand, 23963 - 24286
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||  | ||||||||||||| ||| |     
T  23963 ccttagattcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacctggaaaattgtagaatgaaacttgtgggat 24062  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||  | ||| |||| ||||    
T  24063 tctgacctgaactcgccacagcgagcagaggctctcgcctcgcgagtgacctagaaacaaagtgccttgtta-gattttgcgacctttgttgcacgagtt 24161  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttg-attatgatgtga 299  Q
    ||  |||||||||| ||||| ||||||| ||||||| ||| |||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  24162 gtcgagagttgaactttgggatagtattaagacttattgaggatgttaattataatctgtgaagctgtttaagatgtgttgatgttgaattatgatgtga 24261  T
Q  300 tataatgttatacgcattacttgaa 324  Q
    |||||||||||  ||||||||||||    
T  24262 tataatgttatgtgcattacttgaa 24286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 181; Significance: 9e-98; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 1 - 324
Target Start/End: Original strand, 5782 - 6105
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||  |||||| | |||||||| ||  || |    
T  5782 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattgtaggatgagattgaacctgggaagattattgaatgaaatttgcggga 5881  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     ||||||||||||| |||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||  | ||| |||| |||    
T  5882 ttctgacctgaacttgccacggcgagcagaggctctcgcctcgttagtgacccagaaacagagtgccttgttag-attttgcgacctttgttgcacgagt 5980  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    | |  ||||| |||||||||| ||| ||| ||||||||||||||||||||||||||  |||||||||||||||| ||||||| |||||||||||||||||    
T  5981 tatcgagagtggaaccttgggatagcattaagacttaatgatgatgttaattataaaatgtgaagctgtttaagatgtgttgatgttgattatgatgtga 6080  T
Q  300 tataatgttatacgcattacttgaa 324  Q
    |||||||||||  ||||||||||||    
T  6081 tataatgttatgtgcattacttgaa 6105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 181; Significance: 9e-98; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 13660 - 13348
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||          ||||||||||| ||| |     
T  13660 ccttatatgcttttgagtgcctgaaaatgtctaataatgattaggaaagaatgtaggatgagactgaacctg----------gaatgaaacttgtggcat 13571  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||  | ||| |||| ||||    
T  13570 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacctagaatcagagtgccttgttag-attttgcgacctttgttgcacgagtt 13472  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||  | |||||||||||||| ||| ||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||    
T  13471 gtcgacagttgaaccttgggatagcattaagacttaatgatgatgttaattataatttgtgaagctgtttaagatgtgttgatgttgattatgatgtgat 13372  T
Q  301 ataatgttatacgcattacttgaa 324  Q
    ||||||||||| ||||||||||||    
T  13371 ataatgttatatgcattacttgaa 13348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 181; Significance: 9e-98; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 1 - 301
Target Start/End: Complemental strand, 10618 - 10323
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattt-agaatgaaacttttggaa 99  Q
    |||||||||||||||||||||| |||||| ||| || ||||||||||||||||       |||||||||||| |||||||| |||||||||  |||  ||    
T  10618 ccttagatgcttttgagtgccttaacatgcctagtagtgattaggaaagaatg-------agattgaacctggaaagattttagaatgaaaaattttcaa 10526  T
Q  100 at-ctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaag 198  Q
    || ||||||||||||||||||| |||||||||  || |||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||    
T  10525 attctgacctgaactcgccacggcgagcagagcttcccgcctcgcgagtgacctagaaacaaagtgccttgttaggattttgcgatctgtgtcgcacaag 10426  T
Q  199 ttgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtg 298  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||    
T  10425 ttgttaagagttgaaccttggggtagtattgagacttaataatgatgttaataataatctgtgaagctgtttaagatgtgttgatgttgattatgatgtg 10326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 176; Significance: 9e-95; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 8935 - 8616
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||  ||||||| || |||| ||||| ||| |    
T  8935 ccttagatgcttttgagtgcctgaatatgtctaatagtgattaggaaagaatgtaggatgagattgaacctagaaagattgtaaaatggaacttgtggga 8836  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     |||||||||||||||||||| | || ||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||  | ||| |||| |||    
T  8835 ttctgacctgaactcgccacggccagtagaggctctcgcctcgcgaatgacccagaaacagagtgtcttgttagg-ttttgcgacctttgttgcacgagt 8737  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    |||| ||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||| | ||||||| |||||||||||||||      
T  8736 tgttgagagttgaaccttggagtagtattaagacttaatgatgatgttaattacaatctgtgaagctgtttaggatgtgttgatgttgattatgatgt-- 8639  T
Q  300 tataatgttatacgcattacttgaa 324  Q
      |||||||||  ||||||||||||    
T  8638 --taatgttatgtgcattacttgaa 8616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 174; Significance: 1e-93; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 345
Target Start/End: Original strand, 623 - 968
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaactt-ttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||      |  |||||||||||| ||||||    
T  623 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattgtagaacgagattgaacctggtttagtagagaatgaaacttgttggaa 722  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
    ||||||||||||||||||| | |||||||||| || ||||||| |||||||| |||||||||| | |||||||||||||| |||  | ||| |||| ||     
T  723 atctgacctgaactcgccatggcgagcagaggttcccgcctcgtgagtgacctagaaacagagagtcttgttaggatttttcgacctttgttgcacgagc 822  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    |||| |||||||||||||| |||||||||||||||||||| ||||| || |||| || |||||||||||||||| ||||||| ||| ||||| |||||||    
T  823 tgttgagagttgaaccttgaggtagtattgagacttaatggtgatgctatttatgatatgtgaagctgtttaagatgtgttgatgtcgattacgatgtga 922  T
Q  300 tataatgttatacgcattacttgaattatgaatgtataattgagat 345  Q
    |||||||||||  |||||||||||||||||| || ||| |||||||    
T  923 tataatgttatgtgcattacttgaattatgattgaatatttgagat 968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 8153 - 8221
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    |||| |||| || |||| ||||||||||||  ||||||||||||| |||  | ||||||||||||||||    
T  8153 ccttggatgtttatgagggcctgaacatgtacaataatgattaggcaaggttttagaatgagattgaac 8221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 20863 - 20595
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| ||| |    
T  20863 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattatagaatgaaacttgtggga 20764  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     |||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||  | ||| |||| |||    
T  20763 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagcgacctagaaacagagtgccttgtta-gattttgcgacctttgttgcacgagt 20665  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtt 269  Q
    |||  |||||||||||||||  ||| ||| |||||||||||||||||||| |||||||||||||||||||    
T  20664 tgtcgagagttgaaccttggaatagcattaagacttaatgatgatgttaactataatctgtgaagctgtt 20595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 166; Significance: 8e-89; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 1 - 325
Target Start/End: Original strand, 721 - 1033
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||          ||| |||||||| ||| |     
T  721 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttaggatgagattgaacct----------agattgaaacttgtgggat 810  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||  | ||| |||| | ||    
T  811 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgcacgaatt 909  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||  ||||||||||||| |||||| ||| ||||||||||| || |||||||||||||| |||||||||||||| ||||||   |||||||||||||||||    
T  910 gtcgagagttgaacctttgggtagcattaagacttaatgaagaggttaattataatctttgaagctgtttaagatgtgttttggttgattatgatgtgat 1009  T
Q  301 ataatgttatacgcattacttgaat 325  Q
    |||||||| || |||||||||||||    
T  1010 ataatgtt-tatgcattacttgaat 1033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 154; Significance: 1e-81; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 364 - 163
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||      
T  364 ccttatatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagatttagaatgaaactttttgagt 265  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||||||||  |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  264 tctgacctgaactcgccacagcgagtagaggctctcgccacgcgagtgacccagaaacagagtgccttgttaggattttgcgatctgtgtcgcacaagtt 165  T
Q  201 gt 202  Q
    ||    
T  164 gt 163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 154; Significance: 1e-81; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 347
Target Start/End: Complemental strand, 4983 - 4638
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattt-agaatgaaacttttggaa 99  Q
    |||||||||||||||||||||| |||||||||| |||||| |||| |||| |||||||||||||||||||||||||||||| |||||||| ||||||       
T  4983 ccttagatgcttttgagtgcctaaacatgtctattaatgactagggaagattgtagaatgagattgaacctgaaaagattttagaatgaa-cttttgtcg 4885  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
    ||| ||||||  ||||||| | |||||| ||||||||||||||| ||  ||||||||||||| |||| ||||||||||||||||  | ||| |||| |||    
T  4884 atcagacctgtcctcgccatggcgagcaaaggctctcgcctcgcaagctacccagaaacagaatgccatgttaggattttgcgacctttgttgcacgagt 4785  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctg-tttaagttgtgttggtgttgattatgatgtg 298  Q
    ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||| |||| ||||||   ||||| ||||||| ||||||||    
T  4784 tgttaagagttgaaccttgaggtagtattgagacttattgaagatgttaattataatttgtgaggctgttttaag--atgttgatgttgatcatgatgtg 4687  T
Q  299 atataatgttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    |||||||||  || |||||||||||| ||| |||| ||| || ||||||    
T  4686 atataatgtattatgcattacttgaagtataaatgaatatttaagatgt 4638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 153; Significance: 5e-81; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 13944 - 13633
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||          |||| |||||| ||  |     
T  13944 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaggatgtagcatgagattgaacctg----------gaattaaacttgtgagat 13855  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||| || ||| |||| ||||    
T  13854 tctgagctgaactcgccacggcgagcagaggctctcgcctcgcgagcgacccagaaacagagtgacttgttag-attttgcgacttttgttgcacgagtt 13756  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||  |||||||||||||  ||||| ||| ||||||||  |||| |||||||||||||||||||||||| |||| | ||| | ||||||||||||||||||    
T  13755 gtcgagagttgaacctttcggtaggattaagacttaacaatgaggttaattataatctgtgaagctgtataagatatgtcgttgttgattatgatgtgat 13656  T
Q  301 ataatgttatacgcattacttgaa 324  Q
    |||||||| || ||||||||||||    
T  13655 ataatgtt-tatgcattacttgaa 13633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 152; Significance: 2e-80; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 323
Target Start/End: Complemental strand, 1363 - 1052
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| |||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||          ||||||||||| ||| |     
T  1363 ccttagatgcctttgagtgcctgaacattactaataatgattaggaaagaatgtaggatgagattgaacctg----------gaatgaaacttgtgggat 1274  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    ||||||| |||||||||| | |||||||||||||||||||| |||||||||| |||||| |||||||||| || | |||||||  | ||| |||| ||||    
T  1273 tctgaccagaactcgccatggcgagcagaggctctcgcctcacgagtgacccggaaacaaagtgccttgtgag-actttgcgacctttgttgcacgagtt 1175  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||| |||||||||| || |||||||||| ||||||||||| || | |||||||||||||||||| |||||||| ||||||| ||||||||||||||||||    
T  1174 gttgagagttgaacttttgggtagtattaagacttaatgaagaggctaattataatctgtgaagatgtttaagatgtgttgttgttgattatgatgtgat 1075  T
Q  301 ataatgttatacgcattacttga 323  Q
    |||||||| || |||||||||||    
T  1074 ataatgttttatgcattacttga 1052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 152; Significance: 2e-80; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 346
Target Start/End: Original strand, 51545 - 51889
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||| ||||||| | ||||||||||| ||| |    
T  51545 ccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctggaaagattgtcgaatgaaacttgtggga 51644  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     | |||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||| ||||||| ||||||||||  | ||| |||| |||    
T  51645 ttttgacctgaactcgccacggcgagcagaggctctcacctcgctagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgcacgagt 51743  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttga-ttatgatgtg 298  Q
    |||  |||||||||||||||||||| ||| |||||| |  ||||| ||||||| ||| |||||||||| ||| |   | ||  |||||| ||||||||||    
T  51744 tgtcgagagttgaaccttggggtagcattaagacttgaatatgatattaattacaatttgtgaagctg-ttatgagatattaatgttgatttatgatgtg 51842  T
Q  299 atataatgttatacgcattacttgaattatgaatgtataattgagatg 346  Q
    |||||||| ||||||||||||||||| | | |||| ||||||||||||    
T  51843 atataatg-tatacgcattacttgaagtttaaatgaataattgagatg 51889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 171
Target Start/End: Complemental strand, 32994 - 32826
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct-gaaaagatttagaatgaaacttttggaaat 101  Q
    ||||||| || ||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||| | ||| ||  | ||||||  | |||||| | |    
T  32994 ttagatgattctgagtgcctgaacatgtgtaataatgattaggaaagattctagattgagattgaacttggaatagtctaagaatg-gatttttgggagt 32896  T
Q  102 ctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtt 171  Q
       |||||||||||||| | |||| |||||| |||||||||||||  ||||||  ||||| |||||||||    
T  32895 tacacctgaactcgccatggcgagtagaggccctcgcctcgcgagctacccagttacagaatgccttgtt 32826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 149; Significance: 1e-78; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 324
Target Start/End: Original strand, 10098 - 10409
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||          |||| |||||| ||| |     
T  10098 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaattaaacttgtgggat 10187  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    ||| |||| ||||    
T  10188 tctgacctgaactcgccacggggagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgaccattgttgcacgagtt 10286  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||  ||||||||||| | |||||| ||| ||||||||| || | |||||||||||||||||||||||| |||| | ||| | || |||||||||||||||    
T  10287 gtcgagagttgaacccttgggtagaattaagacttaataataaggttaattataatctgtgaagctgtataagatatgtcgttgatgattatgatgtgat 10386  T
Q  301 ataatgttatacgcattacttgaa 324  Q
    |||||| | || ||||||||||||    
T  10387 ataatgat-tatgcattacttgaa 10409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 147; Significance: 2e-77; HSPs: 3)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 3930 - 3640
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||  |||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||          ||||||||||| ||| |     
T  3930 ccttagatgactttgagtgcctgaacatgactagtaatgattaggaaagaatgtaggatgagattgaacctg----------gaatgaaacttgtgggat 3841  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||||||| | |||||||||||||||| |||||||||||||| ||||||||||||||||| || | |||| ||  | ||| |||| ||||    
T  3840 tctgacctgaactcgccatggcgagcagaggctctcgtctcgcgagtgacccggaaacagagtgccttgtgag-actttgtgacctttgttgcacgagtt 3742  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||| ||||||||||||| |||||||||| ||||||||||| || | ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  3741 gttgagagttgaacctttgggtagtattaagacttaatgaagaggctaattataatctgtgaagctgtttaagatgtgttgttgttgattatgatgtgat 3642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 7994 - 7704
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||  |||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||          ||||||||||| ||| |     
T  7994 ccttagatgactttgagtgcctgaacatgactagtaatgattaggaaagaatgtaggatgagattgaacctg----------gaatgaaacttgtgggat 7905  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||||||| | |||||||||||||||| |||||||||||||| ||||||||||||||||| || | |||| ||  | ||| |||| ||||    
T  7904 tctgacctgaactcgccatggcgagcagaggctctcgtctcgcgagtgacccggaaacagagtgccttgtgag-actttgtgacctttgttgcacgagtt 7806  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||| ||||||||||||| |||||||||| ||||||||||| || | ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  7805 gttgagagttgaacctttgggtagtattaagacttaatgaagaggctaattataatctgtgaagctgtttaagatgtgttgttgttgattatgatgtgat 7706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 27305 - 27374
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| |||||||||||||||||||| |||||||||||||| |||  | |||  ||||||||||||||    
T  27305 ttagatgattttgagtgcctgaacatgtataataatgattaggcaagtttttagtttgagattgaacctg 27374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 145; Significance: 3e-76; HSPs: 4)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 320
Target Start/End: Original strand, 32620 - 32938
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattt-agaatgaaacttttggaa 99  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| || || |||||||||||||||||| |||||||| ||||||||  |||||  |    
T  32620 ccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaggactggagaatgagattgaacctgtaaagattttagaatgaat-ttttgtga 32718  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     |   |||  ||||||||||  |||| |||||||| |||||||||||||||||| ||||||| || ||||||||||||||||||| |||||||||| | |    
T  32719 gttgcaccctaactcgccacagcgaggagaggctcccgcctcgcgagtgacccataaacagaatgtcttgttaggattttgcgatctgtgtcgcaccaat 32818  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    ||||||||||||||||||||||||||||||| ||||| ||| | ||||| ||||||||||||||||| ||| | |  || || ||||||| ||||||||     
T  32819 tgttaagagttgaaccttggggtagtattgaaacttattgaaggtgttagttataatctgtgaagctatttta-tgatgctgatgttgatcatgatgtgt 32917  T
Q  300 tataatgttatacgcattact 320  Q
    |||||||||||| ||||||||    
T  32918 tataatgttatatgcattact 32938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 46385 - 46067
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattt-agaatgaaacttttggaa 99  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| || || |||||||||||||||||| |||||||| ||||||||  |||||  |    
T  46385 ccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaggactggagaatgagattgaacctgtaaagattttagaatgaat-ttttgtga 46287  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     |   |||  ||||||||||  |||| |||||||| |||||||||||||||||| ||||||| || ||||||||||||||||||| |||||||||| | |    
T  46286 gttgcaccctaactcgccacagcgaggagaggctcccgcctcgcgagtgacccataaacagaatgtcttgttaggattttgcgatctgtgtcgcaccaat 46187  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtga 299  Q
    ||||||||||||||||||||||||||||||| ||||| ||| | ||||| ||||||||||||||||| ||| | |  || || ||||||| ||||||||     
T  46186 tgttaagagttgaaccttggggtagtattgaaacttattgaaggtgttagttataatctgtgaagctatttta-tgatgctgatgttgatcatgatgtgt 46088  T
Q  300 tataatgttatacgcattact 320  Q
    |||||||||||| ||||||||    
T  46087 tataatgttatatgcattact 46067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 9 - 225
Target Start/End: Complemental strand, 16539 - 16323
Alignment:
Q  9 gcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaaatctgacc 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||| ||||||  || |||||||| ||||| |    
T  16539 gcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggacgagattgaacctggaaagattgtagaattgaa-ttttggaattctgaac 16441  T
Q  108 tgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagttgttaaga 207  Q
    ||| ||||||||| ||| ||||||| ||| |||||| |||||||||||||||||| | ||||||||| ||||||||  | ||| |||| ||||||| |||    
T  16440 tgagctcgccacggcgatcagaggccctcacctcgcaagtgacccagaaacagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgaga 16341  T
Q  208 gttgaaccttggggtagt 225  Q
    ||||||||||| ||||||    
T  16340 gttgaaccttgaggtagt 16323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 250 - 346
Target Start/End: Complemental strand, 16323 - 16228
Alignment:
Q  250 ttataatctgtgaagctgttt-aagttgtgttggtgttgattatgatgtgatataatgttatacgcattacttgaattatgaatgtataattgagatg 346  Q
    ||||||||||||||||||||| ||| |||  || ||||||| |||| |||||||||||||||| ||||||||||| ||||||||||||| ||||||||    
T  16323 ttataatctgtgaagctgttttaagatgt--tgatgttgatcatgacgtgatataatgttatatgcattacttgagttatgaatgtatacttgagatg 16228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 141; Significance: 7e-74; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 1 - 324
Target Start/End: Original strand, 724 - 1035
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||          |||| |||||| |||||     
T  724 ccttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaattaaacttgtggaat 813  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||| |  | ||| |||| | ||    
T  814 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtaacccagaaacagagtgacttgtta-gattttgcaacctttgttgcacgattt 912  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||  ||||||||||| | |||||| ||| || |||||  |||| ||||| |||||||||||||||||| |||  | ||||| |||||||||||||||| |    
T  913 gtcgagagttgaacccttgggtaggattaagtcttaagaatgaggttaactataatctgtgaagctgtataaaatatgttgttgttgattatgatgtgtt 1012  T
Q  301 ataatgttatacgcattacttgaa 324  Q
    |||||||| || ||||||||||||    
T  1013 ataatgtt-tatgcattacttgaa 1035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 134; Significance: 1e-69; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 4 - 324
Target Start/End: Original strand, 15140 - 15448
Alignment:
Q  4 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaatct 103  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||||          |||| |||||| | | | |||    
T  15140 tagatgcttttgagtgccttaatatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaataaaacttgtaggattct 15229  T
Q  104 gacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagttgtt 203  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||  | ||| |||| ||||||     
T  15230 gacctgaactcgccacggagagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgcacgagttgtc 15328  T
Q  204 aagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgatata 303  Q
     ||||||||  | | |||||| ||| ||||||||| || | |||||||||||||||||||||||| |||| | ||||| || ||||||||||||||||||    
T  15329 gagagttgactcgttgggtaggattaagacttaataataaggttaattataatctgtgaagctgtataagatatgttgttgatgattatgatgtgatata 15428  T
Q  304 atgttatacgcattacttgaa 324  Q
    || || || ||||||||||||    
T  15429 atatt-tatgcattacttgaa 15448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 133; Significance: 4e-69; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 32513 - 32202
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||          |||| |||||| ||| |     
T  32513 ccttagatgcttttgagtgcctgaacatgtctaataatgactaggaaagaatgtgggatgagattgaacctg----------gaattaaacttgtgggat 32424  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||  ||| || | |||||||||  | ||| || | ||||    
T  32423 tctgacttgaacttgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagttacttttttg-attttgcgacctttgttgctctagtt 32325  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||  ||||||||||| | |||||| ||| ||||||||  |||| |||||||||||||||||||||||| |||| | ||| | ||||||||||||||||||    
T  32324 gtcgagagttgaacccttgggtaggattaagacttaacaatgaggttaattataatctgtgaagctgtataagatatgtcgttgttgattatgatgtgat 32225  T
Q  301 ataatgttatacgcattacttgaa 324  Q
    |||||||| || ||||||||||||    
T  32224 ataatgtt-tatgcattacttgaa 32202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 132; Significance: 2e-68; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 322
Target Start/End: Complemental strand, 21350 - 21050
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||| |||| |||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||          ||||||||||| |         
T  21350 ccttagatgttttttagtgcctgaacatgtctaataatgattatgaaagaatgtaggatgagattgtacctg----------gaatgaaacttgt----- 21266  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
         ||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||| ||||||  | ||||||||  | ||| |||| ||||    
T  21265 -----cctgaactcgccacggcgagcagaggctctcgcctcgtgagtgacccaaaaacagagtgacttgttgag-ttttgcgacctttgttgcacgagtt 21172  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    | | ||||||||||||| |||||||||| ||||||||||| |||||||||||||| ||||||||||||||||| ||||||| || |||||||||||||||    
T  21171 gatcagagttgaacctttgggtagtattaagacttaatgaagatgttaattataacctgtgaagctgtttaagatgtgttgatgctgattatgatgtgat 21072  T
Q  301 ataatgttatacgcattacttg 322  Q
    |||||||| || ||||||||||    
T  21071 ataatgttttatgcattacttg 21050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 130; Significance: 3e-67; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 1 - 325
Target Start/End: Complemental strand, 7059 - 6746
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| ||||||||||||||| ||||||||||| |||||||| |||||||| |||||||||||||||          |||| ||||||  || |     
T  7059 ccttagatgcctttgagtgcctgaacgtgtctaataattattaggaaggaatgtaggatgagattgaacctg----------gaattaaacttgagggat 6970  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
     ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| | |||||| |||||||||  | ||| |||| ||||    
T  6969 gctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccataaacagagtgacatgttag-attttgcgacctttgttgcacgagtt 6871  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||  ||||||||||||| |||||| ||| ||| |||||||| | |||| ||||||||||| ||||||| || | | ||||| ||||||||||||||||||    
T  6870 gtcgagagttgaacctttgggtaggattaagatttaatgataaggttatttataatctgtaaagctgtatatgatatgttgttgttgattatgatgtgat 6771  T
Q  301 ataatgttatacgcattacttgaat 325  Q
    |||| ||| || |||||||||||||    
T  6770 ataacgttttatgcattacttgaat 6746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 129; Significance: 1e-66; HSPs: 2)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 674 - 837
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||    
T  674 ccttatatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaatctgaaaagattgtagaatg-aacttttggaa 772  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtg 164  Q
    |||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||    
T  773 atctgacctgaactcgccacggtgagcggaggctctcgcctcgcgagtgacccagaaacagagtg 837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 176 - 347
Target Start/End: Original strand, 2987 - 3158
Alignment:
Q  176 ttttgcgatttgtgtcgcacaagttgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagtt 275  Q
    ||||||||  ||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |    
T  2987 ttttgcgacctgtgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgttaattataacctgtgaagctgtttaagat 3086  T
Q  276 gtgttggtgttgattatgatgtgatataatgttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  3087 gcgttgatgttgattatgatgtgatataatgttatatgcattacttgaattatgaatgtatatttgagatgt 3158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 129; Significance: 1e-66; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 323
Target Start/End: Complemental strand, 5297 - 4987
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||          ||||||||||| ||        
T  5297 ccttagatgcttttgagtgcatgaagatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaatgaaacttgtgaggt 5208  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||||||||| |||| ||||||||| ||||||||||||||| |||||||||||| ||||||||  |||||| |  | ||| |||| ||||    
T  5207 tctgacctgaactcgccacggcgagtagaggctcttgcctcgcgagtgacctagaaacagagtgacttgttag--ttttgccacctttgttgcacgagtt 5110  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||| ||  || |||||| || ||| | | ||||||||||| |  ||||  ||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  5109 gttgaggattaaacctttggctagcaataagacttaatgaaggggttagctataatctgtgaagctgtttaagatgtgttgttgttgattatgatgtgat 5010  T
Q  301 ataatgttatacgcattacttga 323  Q
    |||||||| || |||||||||||    
T  5009 ataatgttttatgcattacttga 4987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 129; Significance: 1e-66; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 385 - 88
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||          |||| |||||| ||| |     
T  385 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaatctg----------gaattaaacttgtgggat 296  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||||||| | |||||||||||||||||||||| ||||||||| ||  |||||| ||||||||  |||||| |  | ||| |||| ||||    
T  295 tctgacctgaactcgccatggcgagcagaggctctcgcctcgcaagtgacccataataagagtgacttgttagatttttgcaacctttgttgcacgagtt 196  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||  | ||||||||||| |||||| ||| ||||||||  |||| ||||| |||||||||||||| ||| |||| | ||||| ||||||||||||||||||    
T  195 gtcgacagttgaacctttgggtaggattaagacttaacaatgaggttaagtataatctgtgaagttgtataagatatgttgttgttgattatgatgtgat 96  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 5161 - 4864
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||          |||| |||||| ||| |     
T  5161 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaatctg----------gaattaaacttgtgggat 5072  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||||||||||| | |||||||||||||||||||||| ||||||||| ||  |||||| ||||||||  |||||| |  | ||| |||| ||||    
T  5071 tctgacctgaactcgccatggcgagcagaggctctcgcctcgcaagtgacccataataagagtgacttgttagatttttgcaacctttgttgcacgagtt 4972  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||  | ||||||||||| |||||| ||| ||||||||  |||| ||||| |||||||||||||| ||| |||| | ||||| ||||||||||||||||||    
T  4971 gtcgacagttgaacctttgggtaggattaagacttaacaatgaggttaagtataatctgtgaagttgtataagatatgttgttgttgattatgatgtgat 4872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 129; Significance: 1e-66; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 272
Target Start/End: Original strand, 11185 - 11445
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||          ||||||||||| ||| |     
T  11185 ccttagattcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaatgaaacttgtgggat 11274  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
     ||||||||||||||||| | |||| |||||||||| ||||||||||||| |||||||| |||| |||||||| |||||||||  | ||| |||| ||||    
T  11275 actgacctgaactcgccaaggcgagaagaggctctcacctcgcgagtgacacagaaacaaagtgacttgttag-attttgcgacctttgttgcacgagtt 11373  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaa 272  Q
    ||  ||||||||||||| |||||| ||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  11374 gtagagagttgaacctttgggtagaattaagacttaatgatgaggttaattataatctgtgaagctgattaa 11445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 14099 - 14028
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| ||||||||||||||| |||| |||||||||||||| |||  | |||| |||||||| |||||    
T  14099 ccttagatgattttgagtgcctgaatatgtataataatgattaggtaagtttttagattgagattggacctg 14028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 127; Significance: 2e-65; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 1739 - 1947
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||    
T  1739 ccttagatg-ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaac-tttggaa 1836  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
    |||||||||||| |||||| | |||||||||||||||||||||||||||||||||  ||||| ||| |  ||||||||||||||| | |||||||| |||    
T  1837 atctgacctgaattcgccatggcgagcagaggctctcgcctcgcgagtgacccagttacagaatgcttgtttaggattttgcgatctttgtcgcacgagt 1936  T
Q  200 tgttaagagtt 210  Q
     ||| ||||||    
T  1937 cgttgagagtt 1947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 127; Significance: 2e-65; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 20572 - 20426
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||      
T  20572 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaataagattgaacctggaaagatttagaatgaaacttttggagt 20473  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||    
T  20472 tctgacctgagctcgccacgacgagcagaggctctcgcctcgcgagt 20426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 126; Significance: 6e-65; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 1 - 325
Target Start/End: Complemental strand, 2401 - 2088
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| ||||||||||||||| ||||||||||| |||||||| |||||||| |||||||||||||||          |||| ||||||  || |     
T  2401 ccttagatgcctttgagtgcctgaacgtgtctaataataattaggaaggaatgtaggatgagattgaacctg----------gaattaaacttgagggat 2312  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
     ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| | |||||| |||||||||  | ||| |||| ||||    
T  2311 gctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacatgttag-attttgcgacctttgttgcacgagtt 2213  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||  ||||||||||||| |||||| ||| |||||||||||| | |||| | ||||| ||| ||||||| || | | ||||| |||||||||||||| |||    
T  2212 gtcgagagttgaacctttgggtaggattaagacttaatgataaggttattaataatatgtaaagctgtatatgatatgttgttgttgattatgatgagat 2113  T
Q  301 ataatgttatacgcattacttgaat 325  Q
    |||||||| || |||||||||||||    
T  2112 ataatgttttatgcattacttgaat 2088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 16728 - 16417
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||          ||| |||||| ||| |     
T  16728 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggacgagattgaacctga----------aattaaacttatgggat 16639  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    | ||||| ||||||| |||| |||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||| ||  | ||| |||| | ||    
T  16638 tttgaccagaactcggcacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacttgtt-ggattttgtgacctttgttgcacgattt 16540  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
     |  ||||||||||  | |||||| ||| ||||||||| |||| ||||| |||||||||||||||||  |||| | ||||| |||||||||||||||| |    
T  16539 ctcgagagttgaacgcttgggtaggattaagacttaataatgaggttaactataatctgtgaagctgaataagatatgttgttgttgattatgatgtgtt 16440  T
Q  301 ataatgttatacgcattacttgaa 324  Q
    |||||||| || ||||||||||||    
T  16439 ataatgtt-tatgcattacttgaa 16417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 118; Significance: 4e-60; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 17669 - 17928
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||| ||||||||||||| ||| |    
T  17669 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggatagattgtagaatgaaacttgtggga 17768  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
     ||||||||||||||||||||                     |||||| ||||||||| |||||| ||||||||| ||||||||  | ||| |||| |||    
T  17769 ttctgacctgaactcgccacg---------------------gcgagtcacccagaaatagagtgacttgttagg-ttttgcgacctttgttgcacgagt 17846  T
Q  200 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttg 281  Q
    |||| ||| ||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  17847 tgttgagaattgaacctttgggtagtattaagacttaatgaggatgttaattataatctgtgaagctgtttaagatgtgttg 17928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 113; Significance: 4e-57; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 52028 - 51732
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||| ||||| |||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||          |||||||||||  || |     
T  52028 cctttgatgcctttgagtgcctgaacaagtctaataatgattaggaaagaatgtaggacgagattgaacctg----------gaatgaaacttacgggat 51939  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    ||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| || ||| |||| ||||    
T  51938 tctaacctgagctcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacttttgttgcacgagtt 51840  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||  ||| ||| ||| | |||||| ||| ||||||||   ||| ||||| |||||||||||||||||  |||| | ||||| |||||| ||||| ||| |    
T  51839 gtcgagaattggacccttgggtaggattaagacttaagagtgaggttaactataatctgtgaagctgaataagatatgttgttgttgaatatgaagtgtt 51740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 2106 - 2250
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |  ||    
T  2106 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaa 2205  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||||| |||||||||| | |||||||||||||||||||||||||    
T  2206 tctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 2250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 106; Significance: 5e-53; HSPs: 2)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 15276 - 15500
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||| | ||| ||||||||||||| ||||| |    
T  15276 ccttagatgcttttgagtgcctgaatatgtttaataatgattaggaaagaatgtagaatgagattgaatctggatagattttagaatgaaac-tttggga 15374  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
    |||||||||||||||||||   |||||||||||||||||||||||||||||| |   ||| | | | |  |||||||||| |||| | |||||||| | |    
T  15375 atctgacctgaactcgccatagcgagcagaggctctcgcctcgcgagtgacctatttacaaaatacttgcttaggatttttcgatctttgtcgcacgaat 15474  T
Q  200 tgttaagagttgaaccttggggtagt 225  Q
     ||| |||||||||||||||||||||    
T  15475 cgttgagagttgaaccttggggtagt 15500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 13102 - 13032
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctga 73  Q
    ||||||| |||||||||||||| ||||| || ||||||||||| |||  | |||| |||||||||||||||    
T  13102 ttagatgattttgagtgcctgaccatgtatattaatgattaggcaagtttttagattgagattgaacctga 13032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 102; Significance: 1e-50; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 17240 - 17024
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||| |||||||| |||| ||||  |    
T  17240 ccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggatagattttagaataaaac-tttgaga 17142  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 199  Q
    || |||||||||||||||| | |||||||||||||||||||||||||||||| |   ||||| | | |  ||||||||||||||| | ||| |||| |||    
T  17141 atatgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacctatttacagaatacttgtttaggattttgcgatctttgtagcacgagt 17042  T
Q  200 tgttaagagttgaacctt 217  Q
     ||| | |||||||||||    
T  17041 cgttgatagttgaacctt 17024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 146
Target Start/End: Original strand, 7471 - 7576
Alignment:
Q  40 attaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaatctgacctgaactcgccacgacgagcagaggctctcgcc 139  Q
    ||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| |  ||||||| |||||||||||| | | ||||||||||||||||    
T  7471 attaggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggataatctga-ctgaactcgccatggcaagcagaggctctcgcc 7569  T
Q  140 tcgcgag 146  Q
    |||||||    
T  7570 tcgcgag 7576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 4803 - 5099
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||          ||||  ||||| ||| |     
T  4803 ccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaattgaacttatgggat 4892  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    ||||||||||||||||||    ||||||||| |||||||||||||||||| ||||||||||||| ||| || |||||||| ||  | ||| |||| ||||    
T  4893 tctgacctgaactcgccaaagagagcagaggatctcgcctcgcgagtgacacagaaacagagtgacttatt-ggattttgagacctttgttgcacgagtt 4991  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||  ||||||||||| | |||||| ||| ||| ||||| || | |||||||||||| |||||| |||  |||  | ||||| ||||||||| |||||| |    
T  4992 gtcgagagttgaacccttgggtaggattaagatttaataataaggttaattataatatgtgaaactgaataaaatatgttgttgttgattaagatgtgtt 5091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 98; Significance: 3e-48; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 16118 - 15974
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||| ||| |  ||    
T  16118 ccttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagactcaaaatgaaaatttagagaa 16019  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||||| |||||||||| | |||||||||||||||||||||||||    
T  16018 tctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 15974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 277 - 346
Target Start/End: Complemental strand, 1522 - 1452
Alignment:
Q  277 tgttggtgttgattatgatgtgatataatg-ttatacgcattacttgaattatgaatgtataattgagatg 346  Q
    |||| ||||||| ||||||||||||||||| |||   ||||||||||||||||||||| || |||||||||    
T  1522 tgttagtgttgaatatgatgtgatataatgattaattgcattacttgaattatgaatgaatgattgagatg 1452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 12388 - 12165
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||| |   ||| ||||||||  |||||||||    
T  12388 ccttagatgcttttgagtgtctgaatatgtttaataatgattaggaaagaatgtagaatgagattgaacctggattaattaagaatgaactttttggaaa 12289  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
     ||||||||||||||||| | |||| |||||||||| ||||||||||  ||||   |||||   |||  ||||||||||||||| | |||| ||| |||     
T  12288 -ctgacctgaactcgccatggcgagtagaggctctcacctcgcgagttgcccaattacagaagccctgtttaggattttgcgatctttgtcacacgagtc 12190  T
Q  201 gttaagagttgaaccttggggtagt 225  Q
    ||| |||||||||||||||||||||    
T  12189 gttgagagttgaaccttggggtagt 12165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 94; Significance: 8e-46; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 28941 - 29081
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||| ||| |  ||    
T  28941 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctagaaagacttagaatgaaaatttagagaa 29040  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcg 142  Q
    ||||||| ||||| |||| | |||||||||||||||||||||    
T  29041 tctgacc-gaactagccatggcgagcagaggctctcgcctcg 29081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 322
Target Start/End: Complemental strand, 47435 - 47132
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||| |||||||||||||||          |||| |||||| ||| |     
T  47435 ccttagatgcttttgagtgtctgaatatgtctaataatgattaggaatgaatgtaggatgagattgaacctg----------gaattaaacttgtgggat 47346  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagtt 200  Q
    |||||||||| |||||||||  | ||||||||||||||||||||||||||||| || ||||||| ||||||| ||  | ||||  | ||| |||| ||||    
T  47345 tctgacctgagctcgccacggagcgcagaggctctcgcctcgcgagtgacccaaaaccagagtgacttgtta-gaaatggcgacctttgttgcacgagtt 47247  T
Q  201 gttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgat 300  Q
    ||  ||||||||||| | |||||| ||| ||||||||  |||      | |||||||||||||||||| |||| | ||||| || || ||||||||||||    
T  47246 gtcgagagttgaacccttgggtaggattaagacttaacaatg------agtataatctgtgaagctgtataagatatgttgttgatgtttatgatgtgat 47153  T
Q  301 ataatgttatacgcattacttg 322  Q
    |||||||| || ||||||||||    
T  47152 ataatgtt-tatgcattacttg 47132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 91; Significance: 5e-44; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 12470 - 12611
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||  |||||||||||||| |  ||    
T  12470 ccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaagacatagaatgaaactttggagaa 12569  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgc 143  Q
    ||||| |||||||||||| | ||||||||||||||||||||||    
T  12570 tctga-ctgaactcgccatggcgagcagaggctctcgcctcgc 12611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 91; Significance: 5e-44; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 3 - 324
Target Start/End: Complemental strand, 1733 - 1424
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaatc 102  Q
    ||||||||||||| |||||||||||||||||||| |||||||  || |  |||| | | |||||||||||          |||| |||||| ||||| ||    
T  1733 ttagatgcttttgcgtgcctgaacatgtctaatattgattagtgaatagggtaggacgtgattgaacctg----------gaattaaacttatggaattc 1644  T
Q  103 tgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagttgt 202  Q
    | | |||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||| |||||| ||| |||||||  | ||| |||| ||||||    
T  1643 taaactgaactcgcgacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacttgtt-ggagtttgcgacctttgttgcacgagttgt 1545  T
Q  203 taagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgatat 302  Q
      ||||||| ||| | |||||| ||| ||||||||  |||| ||||| |||||||| ||||||||  |||| | ||||| |||||||||||| ||| |||    
T  1544 cgagagttggacccttgggtaggattaagacttaagaatgaggttaactataatctatgaagctgaataagatatgttgttgttgattatgaagtgttat 1445  T
Q  303 aatgttatacgcattacttgaa 324  Q
    |||||| || ||||||||||||    
T  1444 aatgtt-tatgcattacttgaa 1424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 3 - 324
Target Start/End: Complemental strand, 7710 - 7401
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaatc 102  Q
    ||||||||||||| |||||||||||||||||||| |||||||  || |  |||| | | |||||||||||          |||| |||||| ||||| ||    
T  7710 ttagatgcttttgcgtgcctgaacatgtctaatattgattagtgaatagggtaggacgtgattgaacctg----------gaattaaacttatggaattc 7621  T
Q  103 tgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagttgt 202  Q
    | | |||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||| |||||| ||| |||||||  | ||| |||| ||||||    
T  7620 taaactgaactcgcgacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacttgtt-ggagtttgcgacctttgttgcacgagttgt 7522  T
Q  203 taagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgatat 302  Q
      ||||||| ||| | |||||| ||| ||||||||  |||| ||||| |||||||| ||||||||  |||| | ||||| |||||||||||| ||| |||    
T  7521 cgagagttggacccttgggtaggattaagacttaagaatgaggttaactataatctatgaagctgaataagatatgttgttgttgattatgaagtgttat 7422  T
Q  303 aatgttatacgcattacttgaa 324  Q
    |||||| || ||||||||||||    
T  7421 aatgtt-tatgcattacttgaa 7401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 235 - 347
Target Start/End: Original strand, 3424 - 3537
Alignment:
Q  235 taatgatgatgttaattataatctgtgaagctgttt-aagttgtgttggtgttgattatgatgtgatataatgttatacgcattacttgaattatgaatg 333  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  3424 taatgatgatgttaattataatctatgaagctgttttaagatgtgttgatgttgattatgatgtgatataatgttatacgcattacttgaattatgagtg 3523  T
Q  334 tataattgagatgt 347  Q
    ||||||||||||||    
T  3524 tataattgagatgt 3537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 7955 - 8099
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| |  ||    
T  7955 ccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggagaa 8054  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||| | | |||||||||| | |||||||||||||||||||||||||    
T  8055 tct-aacagaactcgccatggcgagcagaggctctcgcctcgcgag 8099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 53134 - 53203
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| ||||||||||||||||| || |||||||||||||| |||  | |||| ||||||||||||||    
T  53134 ttagatgattttgagtgcctgaacaagtataataatgattaggcaagtttttagattgagattgaacctg 53203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 10370 - 10226
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| ||||||||||| |||||||||| || ||||||||||||||||||| ||||||||||||||| ||||| |||||| |||||||| |  ||    
T  10370 ccttagatgcctttgagtgcctaaacatgtctattattgattaggaaagaatgtaggatgagattgaacctggaaagacttagaaggaaactttggagaa 10271  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||| |||||||||||| | |||||||||||||||||||||||||    
T  10270 tctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 10226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 9495 - 9639
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| ||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||| ||| ||||| ||||||||||||||| |  ||    
T  9495 ccttagatgcctttgagtgcctgaacatgtctaatattgattacgaaagaatgtaggatgagattgaatctggaaagacttagaatgaaactttggagaa 9594  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||| ||||||||| || | |||||||||||||||||||||||||    
T  9595 tctga-ctgaactcgtcatggcgagcagaggctctcgcctcgcgag 9639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 24312 - 24456
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||  |||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||  ||||| ||||||||||||||| |  ||    
T  24312 ccttagatgcccttgagtgcctgaacatgtctaatattgattaggaaagaatttaggatgagattgaacctagaaagacttagaatgaaactttggataa 24411  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||| |||||||||||| | |||||||||||||||||||||||||    
T  24412 tctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 24456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 13 - 146
Target Start/End: Original strand, 80005 - 80137
Alignment:
Q  13 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaatctgacctgaac 112  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| |  ||||||| ||||||    
T  80005 ttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggagaatctga-ctgaac 80103  T
Q  113 tcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||| || | |||||||||||||||||||||||||    
T  80104 tcgacatggcgagcagaggctctcgcctcgcgag 80137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 86; Significance: 5e-41; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 20087 - 20310
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |   ||| |||||| ||||||| | ||    
T  20087 ccttagatgcttttgagttcctgaacatgtttaataatgagtaggaaagaatgtagaatgagattgaacctggattaattaagaatg-aactttttggaa 20185  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttg-ttaggattttgcgatttgtgtcgcacaagt 199  Q
     ||||||||||||||||| | |||| ||||||||||||||||| |||  || |   |||||  |||||| ||||||||||||| | | |||||||| |||    
T  20186 gctgacctgaactcgccatggcgagtagaggctctcgcctcgcaagttgcctaattacaga-agccttgtttaggattttgcggtctttgtcgcacgagt 20284  T
Q  200 tgttaagagttgaaccttggggtagt 225  Q
     ||| |||||||||||||||| ||||    
T  20285 cgttgagagttgaaccttgggatagt 20310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 346
Target Start/End: Original strand, 65730 - 65800
Alignment:
Q  277 tgttggtgttgattatgatgtgatataatg-ttatacgcattacttgaattatgaatgtataattgagatg 346  Q
    |||| ||||||| ||||||||||||||||| |||   |||||| |||||||||||||| || |||||||||    
T  65730 tgttagtgttgaatatgatgtgatataatgtttaattgcattaattgaattatgaatgaatgattgagatg 65800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 86; Significance: 5e-41; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 133113 - 132967
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||| |||||||||||| |||  |||    
T  133113 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagactttagaatgaaattttgtgaa 133014  T
Q  100 atctg-acctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
      ||| |||||||||||||| | ||||||||||||||||||||||||||    
T  133013 --ctgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 132967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 57466 - 57408
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||||||||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  57466 tttgagtgcctgaacatacctagtattgattaggaatgaatgtagaatcagattgaacc 57408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 146
Target Start/End: Complemental strand, 476 - 344
Alignment:
Q  13 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaatctgacctgaac 112  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||| | |||||||| |||||| |  ||||||| ||||||    
T  476 ttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaatacttagaatggaactttggagaatctga-ctgaac 378  T
Q  113 tcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    |||||| | |||||||||||||||||||||||||    
T  377 tcgccatggcgagcagaggctctcgcctcgcgag 344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 28470 - 28616
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||   |||| |||||||||||| |||  |||    
T  28470 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctacgaagactttagaatgaaattttgtgaa 28569  T
Q  100 atctg-acctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
      ||| |||||||||||||| | ||||||||||||||||||||||||||    
T  28570 --ctgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 28616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 32543 - 32397
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||| |||||||||||| |||  |||    
T  32543 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagactttagaatgaaattttgtgaa 32444  T
Q  100 atctg-acctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
      ||| |||||||||||||| | ||||||||||||||| ||||||||||    
T  32443 --ctgaacctgaactcgccatggcgagcagaggctctcacctcgcgagt 32397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 18619 - 18712
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaactt 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||    
T  18619 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaactt 18712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 257 - 347
Target Start/End: Original strand, 3103 - 3193
Alignment:
Q  257 ctgtgaagctgtttaagttgtgttggtgttgattatgatgtgatataatgttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  3103 ctgtgaagctgtttaagatgtgttgatgttgattatgatgtgatataatgttaaacgcattacttgaattatgaatgtatacttgagatgt 3193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 2464 - 2609
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||| ||||||||| ||||| |||||||||||| || ||       
T  2464 ccttagatgcttttgagtacctgaacatgtctaataatgattaggaaagattggagaatgagtttgaacctgtaaagattttagaatgaaatttgtg--- 2560  T
Q  100 atctg-acctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
    | ||| |||||||||||||| | |||| |||||||||||||||||||||    
T  2561 aactgaacctgaactcgccatggcgagtagaggctctcgcctcgcgagt 2609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 11 - 154
Target Start/End: Complemental strand, 580 - 437
Alignment:
Q  11 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaaatctgacctg 109  Q
    |||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||| || ||||| ||||||||| || |||||  | |   |||||    
T  580 ttttgagtgcctaaacatgtctaataatgattaggaaagattggagaatgagattgaacttggaaagattttagaatg-aatttttgtgagttgcacctg 482  T
Q  110 aactcgccacgacgagcagaggctctcgcctcgcgagtgacccag 154  Q
    ||||||||| | |||||||||||||||||||||||||||||||||    
T  481 aactcgccatggcgagcagaggctctcgcctcgcgagtgacccag 437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 73; Significance: 3e-33; HSPs: 2)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 7271 - 7126
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||| |||||||||||  |||| |      
T  7271 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatgaa--tttttgtg 7174  T
Q  100 atctg-acctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    | ||| |||||||||||||| | |||| |||||||||||||| |||||    
T  7173 aactgaacctgaactcgccatggcgagtagaggctctcgccttgcgag 7126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 8476 - 8405
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||| ||| ||||| ||| ||||| |||| ||||||||||||| ||||| | |||| ||||||||||||||    
T  8476 ccttaaatgtttttgggtgtctgaatatgtgtaataatgattagaaaagattctagattgagattgaacctg 8405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 9536 - 9391
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||| ||||| ||||| |||||||||||  |||| |      
T  9536 ccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagtttagaatgaa--tttttgtg 9439  T
Q  100 atctg-acctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    | ||| |||||||||||||| | |||| ||||||||||||||||||||    
T  9438 aactgaacctgaactcgccatggcgagtagaggctctcgcctcgcgag 9391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 101854 - 101709
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| | ||| |||||||||||  |||||  |    
T  101854 ccttagaagtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggagagactttagaatgaa--ttttgtga 101757  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
    |  |||||||||||||||| | |||||||||||||| |||||| ||||    
T  101756 acttgacctgaactcgccatggcgagcagaggctcttgcctcgggagt 101709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 2746 - 2825
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  2746 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagatt 2825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 45450 - 45596
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||| ||  |||||||||||||||||  |||| |||||||||||  |||||  |    
T  45450 ccttagatgtttttgagtgcctgaatatgtctaataatgattaggaaagattggggaatgagattgaacctggtaagactttagaatgaattttttgtga 45549  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||   |||||||||||||| | |||| ||||||||||||||||||||    
T  45550 attgtacctgaactcgccatggcgagtagaggctctcgcctcgcgag 45596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 19726 - 19573
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||| ||||| ||||||||| || ||||        
T  19726 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaggattggagaatgagattgaacctggaaagattttagaatg-aatttttatgt 19628  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccag 154  Q
     |   |||||||||||||| | |||||||||||||||||||||||| ||||||||    
T  19627 gttgcacctgaactcgccatggcgagcagaggctctcgcctcgcgaatgacccag 19573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 1962 - 2108
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||| ||||||||  |||||||||||||||||||||||||||||| || ||||||||||||||| | |||||| |||||||||||| |||  |||    
T  1962 ccttagatgtttttgagtcactgaacatgtctaataatgattaggaaagattggagaatgagattgaacataaaaagactttagaatgaaattttgtgaa 2061  T
Q  100 atctg-acctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
      ||| |||||||||||||| | | ||||||||||||||||||||||||    
T  2062 --ctgaacctgaactcgccatggcaagcagaggctctcgcctcgcgagt 2108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 13269 - 13343
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaa 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  13269 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgagcctgaaa 13343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 63; Significance: 2e-27; HSPs: 4)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 108 - 328
Target Start/End: Original strand, 15866 - 16088
Alignment:
Q  108 tgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtt-aggattttgcgatttgtgtcgcacaagttgttaag 206  Q
    |||||||||||   |||| | |||| ||||||||||||||  |||||  ||||| ||||||||| ||||||||||||| | ||||||||||||||||| |    
T  15866 tgaactcgccatagcgagtataggccctcgcctcgcgagttgcccagttacagaatgccttgtttaggattttgcgatctttgtcgcacaagttgttatg 15965  T
Q  207 agttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgtt-taagttgtgttggtgttgattatgatgtgatataat 305  Q
    ||||||||||| |||||||| ||  | ||    ||||| | ||| || ||||||||||||||| |||| ||  ||| ||||| |||| ||||||||||||    
T  15966 agttgaacctttgggtagtaatggaaattgtatatgatatcaatgatgatctgtgaagctgttataagatgatttgatgttggttataatgtgatataat 16065  T
Q  306 gttatacgcattacttgaattat 328  Q
      |||| ||||||||||||||||    
T  16066 tgtatatgcattacttgaattat 16088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 328
Target Start/End: Complemental strand, 13435 - 13262
Alignment:
Q  157 acagagtgccttgtt-aggattttgcgatttgtgtcgcacaagttgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataa 255  Q
    ||||| ||||||||| ||||||||||||| | |||||||| |||||||| ||||| ||||||||||||||| ||  | ||    ||||| | ||| || |    
T  13435 acagaatgccttgtttaggattttgcgatctttgtcgcacgagttgttatgagttaaaccttggggtagtaatggaaattgtatatgatatcaatgatga 13336  T
Q  256 tctgtgaagctgtt-taagttgtgttggtgttgattatgatgtgatataatgttatacgcattacttgaattat 328  Q
    |||||||||||||| |||| ||  ||| ||||| |||| ||||||||||||  |||| ||||||||||||||||    
T  13335 tctgtgaagctgttataagatgatttgatgttggttataatgtgatataattgtatatgcattacttgaattat 13262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 13665 - 13596
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| || | ||||||||||||||| |||||||||||||| |||  | |||| ||||||||||||||    
T  13665 ttagatgattctaagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctg 13596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 3230 - 3162
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||||| ||||||||||||||| ||||  ||||||||||||| |||  | |||| |||||||||||    
T  3230 ccttagatgattttgagtgcctgaatatgtacaataatgattaggcaagtttttagattgagattgaac 3162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 62; Significance: 1e-26; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 161145 - 161056
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaa 89  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| | ||| |||||||||||    
T  161145 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggagagactttagaatgaa 161056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 447007 - 446965
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 45  Q
    ||||||| ||||| |||||||||||||| ||||||||||||||    
T  447007 ttagatgattttgggtgcctgaacatgtataataatgattagg 446965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 497938 - 497896
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 45  Q
    ||||||| ||||| |||||||||||||| ||||||||||||||    
T  497938 ttagatgattttgtgtgcctgaacatgtataataatgattagg 497896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 61; Significance: 4e-26; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 6489 - 6557
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6489 ccttagatgccttttagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 6557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 6561 - 6625
Alignment:
Q  106 cctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgt 170  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  6561 cctgaactcgccacggcgagcagaggctctcgcctcgcaagtgacccagaaatagagtgccttgt 6625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 10604 - 10540
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagatt 65  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  10604 ccttagatgcttttgagtgcatgaacatgtctaataatgattaggaaagaatgtaggatgagatt 10540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 3392 - 3321
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||    
T  3392 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaacctg 3321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 13400 - 13227
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct-gaaaagatttagaatgaaacttttggaa 99  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||| || ||| | ||||||||||| ||| || || |||||| || |||||  |    
T  13400 ccttagatgtttttgagtgcctgaacatgtctaattatgattaggaaagattggagattaagattgaacctggaatagtttaagaatg-aatttttgtga 13302  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttagg 174  Q
     |   |||||||||||||| | |||| |||||| |||||||||||||  | ||||  ||||| ||||||||||||    
T  13301 gttgcacctgaactcgccatggcgagtagaggccctcgcctcgcgagctaaccagttacagaatgccttgttagg 13227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 29892 - 29950
Alignment:
Q  13 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    ||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  29892 ttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 29950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 41888 - 41946
Alignment:
Q  13 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    ||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  41888 ttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 41946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 43445 - 43590
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct-gaaaagatttagaatgaaacttttggaa 99  Q
    ||||||||| ||||||||||||||||||||||||| |||||||| ||||| | |||| ||||||||||||| ||| || || ||||||  | |||||| |    
T  43445 ccttagatgtttttgagtgcctgaacatgtctaattatgattagaaaagattctagattgagattgaacctggaatagtttaagaatg-gatttttggga 43543  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
     |   ||||| |||||||| |||||| ||||||||||||||||||||    
T  43544 gttacacctgtactcgccatgacgagtagaggctctcgcctcgcgag 43590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 47365 - 47510
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct-gaaaagatttagaatgaaacttttggaa 99  Q
    ||||||||| ||||||||||||||||||||||||| |||||||| ||||| | |||| ||||||||||||| ||| || || ||||||  | |||||| |    
T  47365 ccttagatgtttttgagtgcctgaacatgtctaattatgattagaaaagattctagattgagattgaacctggaatagtttaagaatg-gatttttggga 47463  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
     |   ||||| ||| |||| |||||| ||||||||||||||||||||    
T  47464 gttacacctgtactagccatgacgagtagaggctctcgcctcgcgag 47510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 2305 - 2376
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||    
T  2305 ccttaaatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaacctg 2376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 147
Target Start/End: Complemental strand, 10987 - 10842
Alignment:
Q  2 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct-gaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||   |||| ||||||||||||| ||| || || |||||| || |||||  |     
T  10987 cttagatgtttttgagtgcctgaacatgtgtaataatgattaggaaagatcctagactgagattgaacctggaatagtttaagaatg-aatttttgtgag 10889  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
    |   ||||||||||||||   |||| |||||||||||||||||||||    
T  10888 ttacacctgaactcgccatagcgagtagaggctctcgcctcgcgagt 10842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 51; Significance: 4e-20; HSPs: 4)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 130367 - 130222
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct-gaaaagatttagaatgaaacttttggaa 99  Q
    |||| |||| ||||||||||||||||||||||| | |||||||| ||||| | |||| ||||||||||||| ||| || || ||||||  | |||||| |    
T  130367 cctttgatgtttttgagtgcctgaacatgtctagttatgattagaaaagattctagattgagattgaacctggaatagtttaagaatg-gatttttggga 130269  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||   |||| ||||||||| | |||||||||||||||||||||||||    
T  130268 attacacctaaactcgccatggcgagcagaggctctcgcctcgcgag 130222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 106 - 328
Target Start/End: Original strand, 60479 - 60703
Alignment:
Q  106 cctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtt-aggattttgcgatttgtgtcgcacaagttgtta 204  Q
    |||||||||||||   |||| |||||||||||||||||||||  |||||  ||||| | | ||||| ||| ||||| ||| | |||||||| || |||||    
T  60479 cctgaactcgccatagcgagtagaggctctcgcctcgcgagtttcccagttacagaatacattgtttagggttttgtgatctttgtcgcacgagatgtta 60578  T
Q  205 agagttgaaccttggggta-gtattgagacttaatgatgatgttaattataatctgtgaagctgtt-taagttgtgttggtgttgattatgatgtgatat 302  Q
     |||||||||||||||||| | || |||| |  || ||||| ||||| |||||||||||||||||| |||  ||  ||| ||||| | || |||||||||    
T  60579 tgagttgaaccttggggtaggaatggagattgtat-atgatattaatgataatctgtgaagctgttataaaatgatttgatgttgttaattatgtgatat 60677  T
Q  303 aatgttatacgcattacttgaattat 328  Q
    | |  |||| ||||||||||||||||    
T  60678 atttgtatatgcattacttgaattat 60703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 60301 - 60367
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||| || ||||||||||||||||| |||||||||||||| |||  | |||| |||||||||||    
T  60301 ttagatgattctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaac 60367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 242479 - 242435
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtag 56  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||    
T  242479 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 242435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 690 - 755
Alignment:
Q  2 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattga 67  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||    
T  690 cttagatgtttttgagtgcctgaacatgtataataatgattaggaaagattgtagattgagattga 755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 6053 - 5985
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||||| || ||| |||||||||||    
T  6053 ccttagatgtttttgagtgcctgaacaggtctaataatgattaggaaagattggagattgagattgaac 5985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 7718 - 7864
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct-gaaaagatttagaatgaaacttttggaa 99  Q
    ||||||||| ||||||||| |||||||||| |||||||||||||||||||   |||| ||||||||||||| ||| || || |||||| || ||||||      
T  7718 ccttagatgtttttgagtgtctgaacatgtgtaataatgattaggaaagatcctagactgagattgaacctagaatagtttaagaatg-aatttttgggg 7816  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
     |   ||||||||||||||   |||| |||||||||||||||||||||    
T  7817 gttacacctgaactcgccatagcgagtagaggctctcgcctcgcgagt 7864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 1039 - 897
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaac-ttttggaa 99  Q
    |||||||||  |||||||||  |||||||||||||| |||||||||  |||||||  ||||||| | ||||| ||||| ||||||||||||   |||| |    
T  1039 ccttagatgtctttgagtgctagaacatgtctaatattgattaggagtgaatgtaagatgagataggacctggaaagacttagaatgaaacaacttggga 940  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcg 142  Q
     |||| ||||||||||||| | |||||||| | ||||||||||    
T  939 ttctgccctgaactcgccatggcgagcagatgttctcgcctcg 897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 10229 - 10289
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatga 61  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||| | ||||||||    
T  10229 ccttagatgtttttgagtgcctgaacatgtctaataatgattagtaaagattttagaatga 10289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 12453 - 12384
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| ||||||||| |||||||||| ||||||||||||||||||| | |||| ||||||||||||||    
T  12453 ttagatgattttgagtgtctgaacatgtataataatgattaggaaagattttagattgagattgaacctg 12384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 5784 - 5852
Alignment:
Q  2 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||||||| |||||||| ||||||||||| ||||||||||||||||| | |||||| ||||||||||||    
T  5784 cttagatgtttttgagtacctgaacatgtataataatgattaggaaaaattgtagattgagattgaacc 5852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 105 - 328
Target Start/End: Complemental strand, 225763 - 225539
Alignment:
Q  105 acctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagttgtta 204  Q
    ||||||| ||||||  || || |||||| || ||||||||||| ||  ||  ||||| ||| |  ||||||||||||||| | |||||||| |||||||     
T  225763 acctgaaatcgccataacaagtagaggcccttgcctcgcgagttacatagttacagaatgcttgtttaggattttgcgatctttgtcgcacgagttgttg 225664  T
Q  205 agagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctg-tttaagttgtgttggtgttgattatgatgtgatata 303  Q
    |||||||||||||||||||||  |||   |||   ||||| ||||| || | ||||||||||| | || | ||  ||| ||||| |||| ||||||||||    
T  225663 agagttgaaccttggggtagttatgaagattatatatgatattaataatgaactgtgaagctgatatatgatgatttgatgttgtttataatgtgatata 225564  T
Q  304 atgttatacgcattacttgaattat 328  Q
    ||  |||| ||||||||||||||||    
T  225563 attgtatatgcattacttgaattat 225539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 227942 - 227881
Alignment:
Q  11 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    |||||||||||| ||||||| ||||||||||||||||||| | |||| ||||||||||||||    
T  227942 ttttgagtgcctaaacatgtataataatgattaggaaagattctagattgagattgaacctg 227881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 145
Target Start/End: Complemental strand, 6987 - 6852
Alignment:
Q  11 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct-gaaaagatttagaatgaaacttttggaaatctgacctg 109  Q
    ||||||||||||| |||||||||||||| ||||||||||| || ||| ||||||||||||| ||| || || |||| ||||||| ||| | |   |||||    
T  6987 ttttgagtgcctggacatgtctaataataattaggaaagattggagattgagattgaacctggaatagtttaagaacgaaacttgtgggagttatacctg 6888  T
Q  110 aactcgccacgacgagcagaggctctcgcctcgcga 145  Q
    ||||||||| | ||||  ||||| ||| ||||||||    
T  6887 aactcgccatggcgagtggaggccctcccctcgcga 6852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 7073 - 6931
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct-gaaaagatttagaatgaaacttttggaa 99  Q
    ||||||||| |||||||||||| ||||||| |||| |||||||||||||| | |||| | ||||||||||| ||| || || ||||||  | |||||| |    
T  7073 ccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattaagattgaacctggaatagtttaagaatg-gatttttggga 6975  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgc 143  Q
    ||   |||||||||||||| | |||| |||||| ||||||||||    
T  6974 attacacctgaactcgccatggcgagtagaggccctcgcctcgc 6931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 14453 - 14311
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct-gaaaagatttagaatgaaacttttggaa 99  Q
    ||||||||| |||||||||||| ||||||| |||| |||||||||||||| | |||| | ||||||||||| ||| || || ||||||  | |||||| |    
T  14453 ccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattaagattgaacctggaatagtttaagaatg-gatttttggga 14355  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgc 143  Q
    ||   |||||||||||||| | |||| |||||| ||||||||||    
T  14354 attacacctgaactcgccatggcgagtagaggccctcgcctcgc 14311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 15491 - 15562
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| |||||||||||| ||||||| |||| |||||||||||||| | |||| ||||||||||||||    
T  15491 ccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattgagattgaacctg 15562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 80796 - 80727
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| |||||||||||||||||||| |||||||||||||| |||  | |||| ||||||||||||||    
T  80796 ttagatgattttgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctg 80727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 116571 - 116539
Alignment:
Q  315 attacttgaattatgaatgtataattgagatgt 347  Q
    ||||||||||||||||||||||| |||||||||    
T  116571 attacttgaattatgaatgtatatttgagatgt 116539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 2313 - 2245
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||||| ||||||||||||||| |||   | |||||||||||||||| ||||||||||||||||||    
T  2313 ccttagatgtttttgagtgcctgaagatgcacactaatgattaggaaagattgtagaatgagattgaac 2245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 10933 - 10970
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataat 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  10933 ccttagatgcttttgagtgcctgaacatgtctaataat 10970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 347
Target Start/End: Complemental strand, 24048 - 23956
Alignment:
Q  254 aatctgtgaagctgtttaagttgtgttggtgttgattatgatgtgatataatgttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    |||||||||||||||| |||   |||| ||||||| ||||||||||||||||||||    ||||||||||| |||||||| || ||||||||||    
T  24048 aatctgtgaagctgtt-aagagatgttagtgttgaatatgatgtgatataatgttaatttcattacttgaactatgaatgaatgattgagatgt 23956  T

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Target: scaffold0004 (Bit Score: 37; Significance: 0.000000000008; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 172 - 347
Target Start/End: Complemental strand, 70082 - 69907
Alignment:
Q  172 aggattttgcgatttgtgtcgcacaagttgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtgaagctgttta 271  Q
    ||||| ||||||| ||||||||| || ||| | |||| || ||| | |||||||| |||||| ||   | || ||||| |  |||||||||||||||| |    
T  70082 aggatattgcgatctgtgtcgcataatttgattagagatggacccttgggtagtaatgagacctatataagaagttaactgcaatctgtgaagctgtt-a 69984  T
Q  272 agttgtgttggtgttgattatgatgtgatataatg-ttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
     |   |||| ||||||| ||||||||||||||||| |||   ||||||||||||||||||||| || ||||||||||    
T  69983 tgagatgttagtgttgaatatgatgtgatataatgattaattgcattacttgaattatgaatgaatgattgagatgt 69907  T

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Target: scaffold0004; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 332850 - 332784
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||| ||||||||||||||| |||| ||| ||||||||||||||  | |||| |||||||||||    
T  332850 ttagatgattttgagtgcctgaatatgtataagaatgattaggaaagtttttagattgagattgaac 332784  T

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Target: scaffold0004; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 58102 - 58161
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  58102 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 58161  T

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Target: scaffold0040 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 103244 - 103315
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| | || ||||||||||||||||| |||||||||||||| |||  | |||| ||||||||||||||    
T  103244 ccttagaggattctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctg 103315  T

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Target: scaffold0139 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 277 - 346
Target Start/End: Complemental strand, 20165 - 20095
Alignment:
Q  277 tgttggtgttgattatgatgtgatataatgttatac-gcattacttgaattatgaatgtataattgagatg 346  Q
    |||| ||||||| |||||||||||||||||||  |  ||||||||||||||||||||| || |||||||||    
T  20165 tgttagtgttgaatatgatgtgatataatgtttaattgcattacttgaattatgaatgaatgattgagatg 20095  T

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Target: scaffold0139; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 38833 - 38762
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| || ||||||| |||| |||| |||||||||||||| |||  | |||| ||||||||||||||    
T  38833 ccttagatgattctgagtgcgtgaatatgtataataatgattaggcaagtttttagattgagattgaacctg 38762  T

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Target: scaffold0123 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 25640 - 25574
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||| ||||||||||||||| |||| |||||||||||||| |||  | |||| |||||||||||    
T  25640 ttagatgattttgagtgcctgaaaatgtataataatgattaggcaagtttttagattgagattgaac 25574  T

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Target: scaffold0076 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 24182 - 24252
Alignment:
Q  2 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    |||||||| ||||||||||||||| || | |||||||||||||| |||  | |||| ||||||||||||||    
T  24182 cttagatgattttgagtgcctgaatatatataataatgattaggcaagcttttagattgagattgaacctg 24252  T

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Target: scaffold0601 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 7188 - 7119
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| ||||||||| ||||| |||| |||||||||||||| |||  | |||| ||||||||||||||    
T  7188 ttagatgattttgagtgactgaatatgtataataatgattaggcaagtttttagattgagattgaacctg 7119  T

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Target: scaffold0005 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 268186 - 268117
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| || | ||||||||||||||| |||||||||||||| |||  | |||| ||||||||||||||    
T  268186 ttagatgattctaagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctg 268117  T

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Target: scaffold0005; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 307529 - 307460
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  307529 ccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 307460  T

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Target: scaffold0367 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 1350 - 1278
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctga 73  Q
    |||||||||||||||||||||| || ||||||| ||| ||||||   |  || ||||||||||||||||||||    
T  1350 ccttagatgcttttgagtgccttaagatgtctattaaagattagatgatgatttagaatgagattgaacctga 1278  T

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Target: scaffold0131 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 277 - 347
Target Start/End: Complemental strand, 36640 - 36569
Alignment:
Q  277 tgttggtgttgattatgatgtgatataatg-ttatacgcattacttgaattatgaatgtataattgagatgt 347  Q
    |||| ||||||| ||||||||||||||||| |||   |||||||||||| |||||||| || ||||||||||    
T  36640 tgttagtgttgaatatgatgtgatataatgtttaattgcattacttgaactatgaatgaatgattgagatgt 36569  T

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Target: scaffold0098 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 29221 - 29150
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| ||||||||||||||| || | |||||||||||||| |||  | |||| |||||||| |||||    
T  29221 ccttagatgattttgagtgcctgaatatatataataatgattaggcaagtttttagattgagattggacctg 29150  T

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Target: scaffold0525 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 3560 - 3618
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||||||||||||||||  ||| ||||||||||| | |||||||| || ||||||||||    
T  3560 tttgagtgcctgaacatacctagtaatgattagggatgaatgtaggatcagattgaacc 3618  T

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Target: scaffold0259 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 10599 - 10541
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  ||||||||||    
T  10599 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacc 10541  T

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Target: scaffold0233 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 14224 - 14282
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  ||||||||||    
T  14224 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacc 14282  T

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Target: scaffold0109 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 27064 - 27006
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  27064 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 27006  T

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Target: scaffold0109; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 35531 - 35575
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattagg 45  Q
    ||||| ||| ||||||||||||||| |||| ||||||||||||||    
T  35531 ccttaaatgattttgagtgcctgaatatgtataataatgattagg 35575  T

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Target: scaffold0077 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 55271 - 55313
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 45  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||    
T  55271 ttagatgattttgagtgcctgaacatgtataagaatgattagg 55313  T

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Target: scaffold0029 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 125797 - 125855
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  125797 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 125855  T

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Target: scaffold0013 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 9762 - 9704
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  ||||||||||    
T  9762 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacc 9704  T

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Target: scaffold0476 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 8247 - 8190
Alignment:
Q  16 agtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctga 73  Q
    ||||||||||||||| | |||||||||||| |||  | |||| |||||||||||||||    
T  8247 agtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctga 8190  T

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Target: scaffold0476; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 13290 - 13233
Alignment:
Q  14 tgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    ||||||||||||||||| | |||||||||||| |||  | |||| |||||||||||||    
T  13290 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 13233  T

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Target: scaffold0737 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 1384 - 1452
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    ||||||| || ||||||||||||||||| ||||||||| |||| |||  | ||||  ||||||||||||    
T  1384 ttagatgattctgagtgcctgaacatgtataataatgagtaggcaagtttttagatggagattgaacct 1452  T

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Target: scaffold0297 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 346
Target Start/End: Original strand, 15612 - 15676
Alignment:
Q  283 tgttgattatgatgtgatataatg-ttatacgcattacttgaattatgaatgtataattgagatg 346  Q
    |||||| |||||||||| |||||| |||   ||||||||||||||||||||| || |||||||||    
T  15612 tgttgaatatgatgtgagataatgattaattgcattacttgaattatgaatgaatgattgagatg 15676  T

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Target: scaffold0184 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 3981 - 4033
Alignment:
Q  94 ttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||||| ||| |||| |||||||| | |||||||| ||||||||||||||||    
T  3981 ttggaaacctggcctgtactcgccatggcgagcagatgctctcgcctcgcgag 4033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 3287 - 3339
Alignment:
Q  94 ttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||||||||| | || |||||||| | |||||||| ||||||||||||||||    
T  3287 ttggaaatctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 3339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 2189 - 2137
Alignment:
Q  94 ttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||||||||||| || |||||||| | |||| ||| ||||||||||||||||    
T  2189 ttggaaatctgacttgtactcgccatggcgagtagatgctctcgcctcgcgag 2137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 9871 - 9819
Alignment:
Q  94 ttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||||||||||| || |||||||| | |||| ||| ||||||||||||||||    
T  9871 ttggaaatctgacttgtactcgccatggcgagtagatgctctcgcctcgcgag 9819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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