View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0755_low_74 (Length: 326)

Name: NF0755_low_74
Description: NF0755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0755_low_74
NF0755_low_74
[»] chr1 (35 HSPs)
chr1 (20-229)||(8401597-8401806)
chr1 (23-188)||(180192-180357)
chr1 (20-149)||(22348552-22348681)
chr1 (80-188)||(30802828-30802936)
chr1 (80-188)||(45890152-45890260)
chr1 (80-188)||(23319459-23319567)
chr1 (80-188)||(18057344-18057452)
chr1 (138-229)||(11422200-11422291)
chr1 (153-229)||(4097285-4097361)
chr1 (155-229)||(34370315-34370389)
chr1 (153-229)||(23174866-23174942)
chr1 (153-229)||(180365-180441)
chr1 (138-188)||(34370255-34370305)
chr1 (186-229)||(23174592-23174635)
chr1 (136-188)||(4097369-4097421)
chr1 (186-229)||(23174723-23174766)
chr1 (153-188)||(23319416-23319451)
chr1 (155-188)||(18057552-18057585)
chr1 (139-188)||(23174950-23174999)
chr1 (155-188)||(31084158-31084191)
chr1 (156-188)||(14229244-14229276)
chr1 (156-188)||(46590630-46590662)
chr1 (186-227)||(180526-180567)
chr1 (155-188)||(10498009-10498042)
chr1 (155-188)||(23319283-23319316)
chr1 (159-188)||(35197468-35197497)
chr1 (159-188)||(42134016-42134045)
chr1 (155-188)||(45890360-45890393)
chr1 (156-188)||(6708457-6708489)
chr1 (156-188)||(14389984-14390016)
chr1 (156-188)||(17811223-17811255)
chr1 (156-188)||(18928897-18928929)
chr1 (156-188)||(32143640-32143672)
chr1 (156-188)||(45849180-45849212)
chr1 (156-188)||(47693738-47693770)
[»] chr3 (24 HSPs)
chr3 (20-229)||(50754575-50754784)
chr3 (20-229)||(31852684-31852893)
chr3 (23-229)||(52986945-52987142)
chr3 (80-188)||(51361914-51362022)
chr3 (80-188)||(7044770-7044878)
chr3 (80-188)||(8718662-8718770)
chr3 (80-188)||(9070549-9070657)
chr3 (80-182)||(16276953-16277055)
chr3 (80-188)||(19384797-19384905)
chr3 (161-229)||(7044687-7044755)
chr3 (153-229)||(51361831-51361906)
chr3 (153-229)||(19384713-19384789)
chr3 (186-229)||(51361703-51361746)
chr3 (152-188)||(47728923-47728959)
chr3 (159-188)||(8718874-8718903)
chr3 (159-188)||(9070761-9070790)
chr3 (156-197)||(12974075-12974116)
chr3 (155-188)||(23756030-23756063)
chr3 (155-188)||(34562654-34562687)
chr3 (155-188)||(41191664-41191697)
chr3 (186-227)||(52986816-52986857)
chr3 (156-188)||(8036872-8036904)
chr3 (156-188)||(21175208-21175240)
chr3 (156-188)||(36185798-36185830)
[»] chr5 (27 HSPs)
chr5 (23-229)||(2826345-2826551)
chr5 (81-188)||(25016638-25016745)
chr5 (80-188)||(42512544-42512652)
chr5 (80-182)||(13363330-13363432)
chr5 (80-188)||(23335109-23335216)
chr5 (81-188)||(28069647-28069754)
chr5 (20-97)||(34329703-34329780)
chr5 (153-229)||(28069563-28069639)
chr5 (153-229)||(34329826-34329902)
chr5 (186-229)||(2826214-2826257)
chr5 (186-229)||(34330002-34330045)
chr5 (155-188)||(25016505-25016538)
chr5 (156-188)||(703802-703834)
chr5 (156-188)||(4951165-4951197)
chr5 (156-188)||(11376453-11376485)
chr5 (156-188)||(20134271-20134303)
chr5 (157-188)||(18464628-18464659)
chr5 (158-188)||(13363540-13363570)
chr5 (152-182)||(16552457-16552487)
chr5 (155-188)||(23334978-23335011)
chr5 (156-188)||(3340719-3340751)
chr5 (156-188)||(5630211-5630243)
chr5 (156-188)||(7286894-7286926)
chr5 (156-188)||(11660865-11660897)
chr5 (152-188)||(34329782-34329818)
chr5 (156-188)||(36864208-36864240)
chr5 (156-188)||(39861651-39861683)
[»] chr8 (30 HSPs)
chr8 (20-229)||(39657888-39658096)
chr8 (23-229)||(4835985-4836191)
chr8 (23-229)||(4841430-4841636)
chr8 (20-188)||(7058675-7058843)
chr8 (20-188)||(2750592-2750760)
chr8 (80-188)||(7614500-7614608)
chr8 (80-188)||(39022525-39022633)
chr8 (20-100)||(1209365-1209445)
chr8 (151-226)||(1209443-1209518)
chr8 (155-229)||(8551103-8551177)
chr8 (80-181)||(15260266-15260367)
chr8 (153-229)||(7058851-7058927)
chr8 (153-229)||(2750768-2750844)
chr8 (80-124)||(32986924-32986968)
chr8 (186-229)||(2751065-2751108)
chr8 (186-226)||(1209609-1209649)
chr8 (156-188)||(23504565-23504597)
chr8 (186-229)||(2750889-2750932)
chr8 (186-229)||(2750977-2751020)
chr8 (155-188)||(23397199-23397232)
chr8 (186-226)||(4835857-4835897)
chr8 (186-226)||(4841302-4841342)
chr8 (156-188)||(15809780-15809812)
chr8 (156-188)||(23567583-23567615)
chr8 (156-188)||(24472953-24472985)
chr8 (156-188)||(27506778-27506810)
chr8 (156-188)||(34343391-34343423)
chr8 (156-188)||(35448550-35448582)
chr8 (155-183)||(39022733-39022761)
chr8 (156-188)||(45409478-45409510)
[»] chr4 (38 HSPs)
chr4 (20-229)||(638508-638717)
chr4 (80-229)||(45256465-45256614)
chr4 (80-188)||(18923812-18923920)
chr4 (136-229)||(26577579-26577672)
chr4 (80-188)||(4168911-4169019)
chr4 (80-188)||(51836592-51836700)
chr4 (80-188)||(22180649-22180755)
chr4 (87-188)||(27764805-27764906)
chr4 (80-182)||(36621232-36621334)
chr4 (80-188)||(21097668-21097776)
chr4 (153-220)||(10473159-10473226)
chr4 (153-228)||(26446800-26446875)
chr4 (166-229)||(51836510-51836573)
chr4 (153-226)||(38245558-38245631)
chr4 (186-229)||(10473459-10473502)
chr4 (155-188)||(27765022-27765055)
chr4 (156-188)||(8157182-8157214)
chr4 (156-188)||(52325243-52325275)
chr4 (153-188)||(4169027-4169062)
chr4 (186-229)||(10473328-10473371)
chr4 (190-229)||(38245738-38245777)
chr4 (155-189)||(1728875-1728909)
chr4 (138-188)||(10473101-10473151)
chr4 (186-228)||(45256699-45256741)
chr4 (155-188)||(18924020-18924053)
chr4 (155-188)||(20862305-20862338)
chr4 (155-188)||(38010649-38010682)
chr4 (156-188)||(2124416-2124448)
chr4 (156-188)||(9813017-9813049)
chr4 (156-188)||(10374184-10374216)
chr4 (156-188)||(16474894-16474926)
chr4 (154-182)||(38245516-38245544)
chr4 (156-188)||(38563877-38563909)
chr4 (156-184)||(41025138-41025166)
chr4 (156-188)||(47568025-47568057)
chr4 (156-188)||(51076969-51077001)
chr4 (156-188)||(53526392-53526424)
chr4 (156-188)||(54895523-54895555)
[»] chr6 (11 HSPs)
chr6 (20-229)||(33345651-33345860)
chr6 (20-229)||(24736891-24737099)
chr6 (23-229)||(877769-877975)
chr6 (186-229)||(878063-878106)
chr6 (156-188)||(14237850-14237882)
chr6 (190-229)||(878210-878249)
chr6 (186-229)||(24736760-24736803)
chr6 (155-188)||(18611920-18611953)
chr6 (155-188)||(30909346-30909379)
chr6 (156-188)||(25119178-25119210)
chr6 (152-188)||(27079774-27079810)
[»] chr7 (22 HSPs)
chr7 (20-188)||(15974265-15974433)
chr7 (80-188)||(30430266-30430374)
chr7 (80-188)||(33798359-33798467)
chr7 (80-188)||(46024586-46024693)
chr7 (80-181)||(46572980-46573080)
chr7 (20-100)||(48305880-48305960)
chr7 (153-229)||(15974181-15974257)
chr7 (20-100)||(48691571-48691651)
chr7 (153-227)||(46572891-46572965)
chr7 (159-229)||(48691700-48691770)
chr7 (153-229)||(48306003-48306079)
chr7 (186-229)||(46572764-46572807)
chr7 (186-229)||(15974050-15974093)
chr7 (153-188)||(33798475-33798510)
chr7 (186-229)||(48691861-48691904)
chr7 (155-188)||(24360521-24360554)
chr7 (155-188)||(32091287-32091320)
chr7 (155-188)||(46024793-46024826)
chr7 (151-188)||(48305958-48305995)
chr7 (157-189)||(5758055-5758087)
chr7 (156-188)||(6620738-6620770)
chr7 (156-188)||(44426739-44426771)
[»] chr2 (22 HSPs)
chr2 (126-229)||(14550755-14550858)
chr2 (80-188)||(20710318-20710426)
chr2 (80-188)||(18297580-18297688)
chr2 (136-229)||(2264153-2264246)
chr2 (20-97)||(4579228-4579305)
chr2 (153-229)||(25193495-25193571)
chr2 (152-229)||(4579149-4579226)
chr2 (153-229)||(18297496-18297572)
chr2 (186-229)||(2264465-2264508)
chr2 (187-229)||(4579009-4579051)
chr2 (186-229)||(14550612-14550655)
chr2 (186-229)||(18297365-18297408)
chr2 (187-229)||(4578749-4578791)
chr2 (187-229)||(4578879-4578921)
chr2 (155-188)||(4281088-4281121)
chr2 (155-188)||(41345342-41345375)
chr2 (156-188)||(1095251-1095283)
chr2 (156-188)||(12449126-12449158)
chr2 (156-188)||(22596376-22596408)
chr2 (156-188)||(25575395-25575427)
chr2 (156-188)||(30777419-30777451)
chr2 (156-188)||(42364633-42364665)
[»] scaffold0238 (3 HSPs)
scaffold0238 (80-181)||(24727-24828)
scaffold0238 (186-227)||(24518-24559)
scaffold0238 (185-229)||(24659-24703)
[»] scaffold0194 (1 HSPs)
scaffold0194 (80-188)||(28157-28265)
[»] scaffold0097 (1 HSPs)
scaffold0097 (80-188)||(14157-14265)
[»] scaffold0009 (1 HSPs)
scaffold0009 (92-188)||(203357-203453)
[»] scaffold0338 (3 HSPs)
scaffold0338 (153-229)||(6171-6247)
scaffold0338 (186-229)||(6335-6378)
scaffold0338 (151-188)||(6126-6163)
[»] scaffold0004 (1 HSPs)
scaffold0004 (156-188)||(96139-96171)
[»] scaffold0249 (1 HSPs)
scaffold0249 (156-188)||(23616-23648)
[»] scaffold0129 (1 HSPs)
scaffold0129 (156-188)||(19992-20024)


Alignment Details
Target: chr1 (Bit Score: 186; Significance: 1e-101; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 20 - 229
Target Start/End: Complemental strand, 8401806 - 8401597
Alignment:
Q  20 gatgaatttgagagtggtagacgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaa 119  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  8401806 gatgaattcgagagtggtagacgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcgaaa 8401707  T
Q  120 tctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtac 219  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||    
T  8401706 tctttatgatgttaaagggatttatggctgggaaactgctggaaaccattaagtacatctaatggttttccacagcaaaatggttttggcattccggtac 8401607  T
Q  220 ggtgatgatg 229  Q
    ||||||||||    
T  8401606 ggtgatgatg 8401597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 23 - 188
Target Start/End: Original strand, 180192 - 180357
Alignment:
Q  23 gaatttgagagtggtagacgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatct 122  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  180192 gaattcgagagtggtagatgatgtttatgtgattttctgtggtttagtgttcatgaggttcacagtttcagatctgaagttgttactggattcgaaatct 180291  T
Q  123 ttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatctaatgatttt 188  Q
    || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  180292 ttgtgatgttagagggatttatggctgggaaactgctagaaaccattaagtacatctaatggtttt 180357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 20 - 149
Target Start/End: Original strand, 22348552 - 22348681
Alignment:
Q  20 gatgaatttgagagtggtagacgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaa 119  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||| |||    
T  22348552 gatgaattcgagagtggtagatgatgtttatgtgattttctgtggtttaatgttcatgagtttcacggtttcagatctgaagttcttactggattcgaaa 22348651  T
Q  120 tctttatgatgttagagggatttatggctg 149  Q
    ||||| |||| |||||||||||||||||||    
T  22348652 tctttgtgatattagagggatttatggctg 22348681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 30802828 - 30802936
Alignment:
Q  80 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 179  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  30802828 gttcacggtttcagatctgaagttgttactggattcgaaatctttgtgatgttaaagggatttatggctgggaaactgctggaaaccattaagtacatct 30802927  T
Q  180 aatgatttt 188  Q
    |||||||||    
T  30802928 aatgatttt 30802936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 45890152 - 45890260
Alignment:
Q  80 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 179  Q
    ||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  45890152 gttcacgatttcagatctgaagttgttactggattcgaaatctttgtgatgttagagggatttatcgctgggaaactgctggaaaccattaagtacatct 45890251  T
Q  180 aatgatttt 188  Q
    |||| ||||    
T  45890252 aatggtttt 45890260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 23319567 - 23319459
Alignment:
Q  80 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 179  Q
    ||||| |||||||||||||||||||||||||||||| |||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  23319567 gttcatggtttcagatctgaagttgttactggattcgaaatctttgtgatgttttagggatttatggctgggaaactgctggaaaccattaagtacatct 23319468  T
Q  180 aatgatttt 188  Q
    |||| ||||    
T  23319467 aatggtttt 23319459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 18057344 - 18057452
Alignment:
Q  80 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 179  Q
    |||||||||||||||||||||||||||||||||||| |||||| |  |||||||||||||||||||||| | |||||| |||||||||||||||||||||    
T  18057344 gttcacggtttcagatctgaagttgttactggattcgaaatctctgcgatgttagagggatttatggctagaaaactgttggaaaccattaagtacatct 18057443  T
Q  180 aatgatttt 188  Q
    |||| ||||    
T  18057444 aatggtttt 18057452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 138 - 229
Target Start/End: Original strand, 11422200 - 11422291
Alignment:
Q  138 gatttatggctgggaaactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||| ||| |||||||||    
T  11422200 gatttatggctgggaaactgctggaaaccattaagtacatctaatggttttccacagcaaaatggttttggcattccgatacagtgatgatg 11422291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 153 - 229
Target Start/End: Complemental strand, 4097361 - 4097285
Alignment:
Q  153 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  4097361 aactgctggaaaccattaagtacatctaatgattttccacaacaaaattgttttggcattccggtacggtgatgatg 4097285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 229
Target Start/End: Original strand, 34370315 - 34370389
Alignment:
Q  155 ctgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||    
T  34370315 ctgctggaaaccattaagtacatctaatggttttccacagcaaaatggttttggcattccggtacggtgatgatg 34370389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 153 - 229
Target Start/End: Complemental strand, 23174942 - 23174866
Alignment:
Q  153 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||| ||||||||||||||||    
T  23174942 aactgctggaaaccattaagtacatctaatggttttccacagcaaaatggttttggcatttcggtacggtgatgatg 23174866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 153 - 229
Target Start/End: Original strand, 180365 - 180441
Alignment:
Q  153 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    |||||||| |||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||| |||||||||    
T  180365 aactgctgaaaaccattaagtacatctaatggttttccacagcaaaatggttttggcattccggtacagtgatgatg 180441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 188
Target Start/End: Original strand, 34370255 - 34370305
Alignment:
Q  138 gatttatggctgggaaactgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  34370255 gatttatggctgggaaactgctggaaactattaagtacatctaatggtttt 34370305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 229
Target Start/End: Complemental strand, 23174635 - 23174592
Alignment:
Q  186 tttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  23174635 tttccacaacaaaatggttttggcattccggtacggtgatgatg 23174592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 4097421 - 4097369
Alignment:
Q  136 gggatttatggctgggaaactgctggaaaccattaagtacatctaatgatttt 188  Q
    ||||||||||||||||||| || ||||||| ||||||||||||||||| ||||    
T  4097421 gggatttatggctgggaaattgatggaaactattaagtacatctaatggtttt 4097369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 229
Target Start/End: Complemental strand, 23174766 - 23174723
Alignment:
Q  186 tttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    ||||||||||||||||||||| |||||||| |||||||||||||    
T  23174766 tttccacaacaaaatggttttggcattccgatacggtgatgatg 23174723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 153 - 188
Target Start/End: Complemental strand, 23319451 - 23319416
Alignment:
Q  153 aactgctggaaaccattaagtacatctaatgatttt 188  Q
    ||||||||||||||||||||||||||||||||||||    
T  23319451 aactgctggaaaccattaagtacatctaatgatttt 23319416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 188
Target Start/End: Original strand, 18057552 - 18057585
Alignment:
Q  155 ctgctggaaaccattaagtacatctaatgatttt 188  Q
    ||||||||||||||||||||||||||||||||||    
T  18057552 ctgctggaaaccattaagtacatctaatgatttt 18057585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 139 - 188
Target Start/End: Complemental strand, 23174999 - 23174950
Alignment:
Q  139 atttatggctgggaaactgctggaaaccattaagtacatctaatgatttt 188  Q
    ||||||||||| |||| ||||||||||||||||||| |||||||| ||||    
T  23174999 atttatggctgcgaaattgctggaaaccattaagtatatctaatggtttt 23174950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 188
Target Start/End: Original strand, 31084158 - 31084191
Alignment:
Q  155 ctgctggaaaccattaagtacatctaatgatttt 188  Q
    ||||||||||||||||||||||||||||||||||    
T  31084158 ctgctggaaaccattaagtacatctaatgatttt 31084191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 14229276 - 14229244
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||||||||    
T  14229276 tgctggaaaccattaagtacatctaatgatttt 14229244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 46590662 - 46590630
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||||||||    
T  46590662 tgctggaaaccattaagtacatctaatgatttt 46590630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 227
Target Start/End: Original strand, 180526 - 180567
Alignment:
Q  186 tttccacaacaaaatggtttttgcattccggtacggtgatga 227  Q
    ||||||||  ||||||||||| ||||||||||||||||||||    
T  180526 tttccacagaaaaatggttttggcattccggtacggtgatga 180567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 188
Target Start/End: Original strand, 10498009 - 10498042
Alignment:
Q  155 ctgctggaaaccattaagtacatctaatgatttt 188  Q
    ||||| ||||||||||||||||||||||||||||    
T  10498009 ctgctagaaaccattaagtacatctaatgatttt 10498042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 188
Target Start/End: Complemental strand, 23319316 - 23319283
Alignment:
Q  155 ctgctggaaaccattaagtacatctaatgatttt 188  Q
    ||||||||||||||||||||||||||||| ||||    
T  23319316 ctgctggaaaccattaagtacatctaatggtttt 23319283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 188
Target Start/End: Complemental strand, 35197497 - 35197468
Alignment:
Q  159 tggaaaccattaagtacatctaatgatttt 188  Q
    ||||||||||||||||||||||||||||||    
T  35197497 tggaaaccattaagtacatctaatgatttt 35197468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 188
Target Start/End: Complemental strand, 42134045 - 42134016
Alignment:
Q  159 tggaaaccattaagtacatctaatgatttt 188  Q
    ||||||||||||||||||||||||||||||    
T  42134045 tggaaaccattaagtacatctaatgatttt 42134016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 188
Target Start/End: Original strand, 45890360 - 45890393
Alignment:
Q  155 ctgctggaaaccattaagtacatctaatgatttt 188  Q
    |||| |||||||||||||||||||||||||||||    
T  45890360 ctgccggaaaccattaagtacatctaatgatttt 45890393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 6708457 - 6708489
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    ||||||||||||||||||||||||||| |||||    
T  6708457 tgctggaaaccattaagtacatctaattatttt 6708489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 14389984 - 14390016
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||| ||||    
T  14389984 tgctggaaaccattaagtacatctaatggtttt 14390016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 17811223 - 17811255
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||| ||||    
T  17811223 tgctggaaaccattaagtacatctaatggtttt 17811255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 18928897 - 18928929
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||| ||||    
T  18928897 tgctggaaaccattaagtacatctaatggtttt 18928929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 32143672 - 32143640
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||| ||||||||||||||||||||||||||||    
T  32143672 tgctagaaaccattaagtacatctaatgatttt 32143640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 45849212 - 45849180
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||| ||||    
T  45849212 tgctggaaaccattaagtacatctaatggtttt 45849180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 47693770 - 47693738
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||| ||||    
T  47693770 tgctggaaaccattaagtacatctaatggtttt 47693738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 174; Significance: 1e-93; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 20 - 229
Target Start/End: Original strand, 50754575 - 50754784
Alignment:
Q  20 gatgaatttgagagtggtagacgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaa 119  Q
    |||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  50754575 gatgaattcgagagtgatagaggatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcgaaa 50754674  T
Q  120 tctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtac 219  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||    
T  50754675 tctttgtgatgttatagggatttatggctgggaaactgctggaaaccattaagtacatctaatggttttccacagcaaaatggttttggcattccggtac 50754774  T
Q  220 ggtgatgatg 229  Q
    ||||||||||    
T  50754775 ggtgatgatg 50754784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 20 - 229
Target Start/End: Original strand, 31852684 - 31852893
Alignment:
Q  20 gatgaatttgagagtggtagacgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaa 119  Q
    |||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||    
T  31852684 gatgaattcgagaggggtagatgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggttttagatctgaagttgttattggaatcaaaa 31852783  T
Q  120 tctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtac 219  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  31852784 tctttgtgatgttagagggatttatggctgggaaactgttggaaaccattaagtacatctaatggttttccacaacaaaatggttttggcattccggtac 31852883  T
Q  220 ggtgatgatg 229  Q
    ||||||||||    
T  31852884 ggtgatgatg 31852893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 23 - 229
Target Start/End: Complemental strand, 52987142 - 52986945
Alignment:
Q  23 gaatttgagagtggtagacgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatct 122  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||| ||||||| ||||||    
T  52987142 gaatttgagagtggtagatgatgtttatgtgattttctgtggtttagtgttca---------cggtttcagatctgaagttgttattggattcgaaatct 52987052  T
Q  123 ttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggt 222  Q
    ||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||    
T  52987051 ttgcgatgttagagggatttatggctgggaaactactggaaaccattaagtacatctaatggttttccacagcaaaatggttttggcattccggtacggt 52986952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 51362022 - 51361914
Alignment:
Q  80 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 179  Q
    |||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  51362022 gttcacggtttcagatatgaagttgttactggattcgaaatctttgtgatgttagagggatttatggctggaaaactgctggaaaccattaagtacatct 51361923  T
Q  180 aatgatttt 188  Q
    |||||||||    
T  51361922 aatgatttt 51361914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 7044878 - 7044770
Alignment:
Q  80 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 179  Q
    |||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  7044878 gttcacggtttcagatctgaagttgttactggattcgaaatctttgttatgttagagggatttatggcagggaaactgctggaaaccattaagtacatct 7044779  T
Q  180 aatgatttt 188  Q
    |||| ||||    
T  7044778 aatggtttt 7044770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 8718662 - 8718770
Alignment:
Q  80 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 179  Q
    |||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  8718662 gttcacggtttcagatctgaagttgttattggattcaaaaactttgtgatgttagagggatttatggctgggaaactactggaaaccattaagtacatct 8718761  T
Q  180 aatgatttt 188  Q
    ||| |||||    
T  8718762 aataatttt 8718770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 9070549 - 9070657
Alignment:
Q  80 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 179  Q
    |||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  9070549 gttcacggtttcagatctgaagttgttattggattcaaaaactttgtgatgttagagggatttatggctgggaaactactggaaaccattaagtacatct 9070648  T
Q  180 aatgatttt 188  Q
    ||| |||||    
T  9070649 aataatttt 9070657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 80 - 182
Target Start/End: Complemental strand, 16277055 - 16276953
Alignment:
Q  80 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 179  Q
    ||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16277055 gttcacggttttagatctgaagttgttactggattcgaaatctttgtgatgttagagggatttatggccgggaaactgctggaaaccattaagtacatct 16276956  T
Q  180 aat 182  Q
    |||    
T  16276955 aat 16276953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 19384905 - 19384797
Alignment:
Q  80 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 179  Q
    |||||| |||| |||||||||||||||||| |||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||| ||||    
T  19384905 gttcacagtttaagatctgaagttgttactagattcaaaatctttgtgatgttagaggaatttatggttgggaaactgctggaaaccattaagtatatct 19384806  T
Q  180 aatgatttt 188  Q
    |||| ||||    
T  19384805 aatggtttt 19384797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 161 - 229
Target Start/End: Complemental strand, 7044755 - 7044687
Alignment:
Q  161 gaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    ||||||||||||||||||||||| ||||||| | |||||||||||| ||||||||||||||||||||||    
T  7044755 gaaaccattaagtacatctaatggttttccatagcaaaatggttttggcattccggtacggtgatgatg 7044687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 229
Target Start/End: Complemental strand, 51361906 - 51361831
Alignment:
Q  153 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    ||||| ||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||| |||||||||    
T  51361906 aactgttggaaaccattaagtacatctaatggttttccacagcaaaatggttttggcattccggtac-gtgatgatg 51361831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 153 - 229
Target Start/End: Complemental strand, 19384789 - 19384713
Alignment:
Q  153 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    ||||| || ||| |||||||||||||||||| |||| ||||| ||||||||||| ||||||||||||||||||||||    
T  19384789 aactgttgaaaatcattaagtacatctaatggttttacacaataaaatggttttggcattccggtacggtgatgatg 19384713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 229
Target Start/End: Complemental strand, 51361746 - 51361703
Alignment:
Q  186 tttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  51361746 tttccacaacaaaatggttttggcattccggtacggtgatgatg 51361703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 47728923 - 47728959
Alignment:
Q  152 aaactgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||||||| ||||    
T  47728923 aaactgctggaaaccattaagtacatctaatggtttt 47728959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 188
Target Start/End: Original strand, 8718874 - 8718903
Alignment:
Q  159 tggaaaccattaagtacatctaatgatttt 188  Q
    ||||||||||||||||||||||||||||||    
T  8718874 tggaaaccattaagtacatctaatgatttt 8718903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 188
Target Start/End: Original strand, 9070761 - 9070790
Alignment:
Q  159 tggaaaccattaagtacatctaatgatttt 188  Q
    ||||||||||||||||||||||||||||||    
T  9070761 tggaaaccattaagtacatctaatgatttt 9070790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 12974116 - 12974075
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgattttccacaacaa 197  Q
    ||||||||||||||||||||||| ||||||||| || |||||    
T  12974116 tgctggaaaccattaagtacatcgaatgattttgcagaacaa 12974075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 188
Target Start/End: Original strand, 23756030 - 23756063
Alignment:
Q  155 ctgctggaaaccattaagtacatctaatgatttt 188  Q
    ||||||||||||||||||||||||||||| ||||    
T  23756030 ctgctggaaaccattaagtacatctaatggtttt 23756063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 188
Target Start/End: Complemental strand, 34562687 - 34562654
Alignment:
Q  155 ctgctggaaaccattaagtacatctaatgatttt 188  Q
    ||||||||||||||||||||||||||||| ||||    
T  34562687 ctgctggaaaccattaagtacatctaatggtttt 34562654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 188
Target Start/End: Complemental strand, 41191697 - 41191664
Alignment:
Q  155 ctgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||| |||||||||||||||||    
T  41191697 ctgctggaaaccattatgtacatctaatgatttt 41191664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 227
Target Start/End: Complemental strand, 52986857 - 52986816
Alignment:
Q  186 tttccacaacaaaatggtttttgcattccggtacggtgatga 227  Q
    ||||||||  ||||||||||| ||||||||||||||||||||    
T  52986857 tttccacagtaaaatggttttggcattccggtacggtgatga 52986816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 8036904 - 8036872
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||| ||||    
T  8036904 tgctggaaaccattaagtacatctaatggtttt 8036872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 21175208 - 21175240
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||| ||||    
T  21175208 tgctggaaaccattaagtacatctaatggtttt 21175240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 36185830 - 36185798
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||| ||||    
T  36185830 tgctggaaaccattaagtacatctaatggtttt 36185798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 167; Significance: 2e-89; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 23 - 229
Target Start/End: Complemental strand, 2826551 - 2826345
Alignment:
Q  23 gaatttgagagtggtagacgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatct 122  Q
    ||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2826551 gaattcgagagtggtagatgatgtttatgtgattttctatggtttagtgttcatgaggttcacggttttagatctgaagttgttactggattcaaaatct 2826452  T
Q  123 ttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggt 222  Q
    || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||| |||||||||||| |||||||||||||||    
T  2826451 ttgtgatgttagagggatttatggctgggaaactgttggaaaccattaagtacatctaatcgttttccacagcaaaatggttttggcattccggtacggt 2826352  T
Q  223 gatgatg 229  Q
    |||||||    
T  2826351 gatgatg 2826345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 25016745 - 25016638
Alignment:
Q  81 ttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatcta 180  Q
    ||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  25016745 ttcacagtttcagatctgaagttgttactggattcgaaatctttgtgatgttagaggaatttatggctgggaaactgctggaaaccattaagtacatcta 25016646  T
Q  181 atgatttt 188  Q
    ||||||||    
T  25016645 atgatttt 25016638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 42512544 - 42512652
Alignment:
Q  80 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 179  Q
    ||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  42512544 gttcacggtttcatatctgaagttgttactggattcgaaatctttgtgatgttagagggatttatggctgggaaactgctcgaaaccattaagtacatct 42512643  T
Q  180 aatgatttt 188  Q
    |||| ||||    
T  42512644 aatggtttt 42512652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 80 - 182
Target Start/End: Original strand, 13363330 - 13363432
Alignment:
Q  80 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 179  Q
    |||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  13363330 gttcacggtttcagatctgaagttgttattggattcgaaatctttgtgatgttagagggatttatggctgggaaactactggaaaccattaagtacatct 13363429  T
Q  180 aat 182  Q
    |||    
T  13363430 aat 13363432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 23335216 - 23335109
Alignment:
Q  80 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 179  Q
    |||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  23335216 gttcacggtttcagatctgaagttgaaactggattcaaaatctttgtgatgttagagggatttatggctgggaaac-gctggaaaccattaagtacatct 23335118  T
Q  180 aatgatttt 188  Q
    |||| ||||    
T  23335117 aatggtttt 23335109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 28069754 - 28069647
Alignment:
Q  81 ttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatcta 180  Q
    ||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  28069754 ttcacggtttcagatctgaagttgttactggattcgaaatcttttttatgttagagggatttatggatgggaaactgctggaaactattaagtacatcta 28069655  T
Q  181 atgatttt 188  Q
    ||| ||||    
T  28069654 atggtttt 28069647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 34329703 - 34329780
Alignment:
Q  20 gatgaatttgagagtggtagacgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatct 97  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  34329703 gatgaatttgagagtggtagatgatgtttatgtgattttctgtggtttagtgttcattcggttcacggtttcagatct 34329780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 153 - 229
Target Start/End: Complemental strand, 28069639 - 28069563
Alignment:
Q  153 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||| ||||||||||||||    
T  28069639 aactgctggaaaccattaagtacatctaatggttttccacagcaaaatggttttggcattccagtacggtgatgatg 28069563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 153 - 229
Target Start/End: Original strand, 34329826 - 34329902
Alignment:
Q  153 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    ||||||||||||||||||||||||||||||| ||||||| | |||||||||||| |||||| |||||||||||||||    
T  34329826 aactgctggaaaccattaagtacatctaatggttttccaaagcaaaatggttttggcattctggtacggtgatgatg 34329902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 229
Target Start/End: Complemental strand, 2826257 - 2826214
Alignment:
Q  186 tttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    |||||||| |||||||||||| ||||||||||||||||||||||    
T  2826257 tttccacagcaaaatggttttggcattccggtacggtgatgatg 2826214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 229
Target Start/End: Original strand, 34330002 - 34330045
Alignment:
Q  186 tttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    |||||||| |||||||||||| ||||||||||||||||||||||    
T  34330002 tttccacagcaaaatggttttggcattccggtacggtgatgatg 34330045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 188
Target Start/End: Complemental strand, 25016538 - 25016505
Alignment:
Q  155 ctgctggaaaccattaagtacatctaatgatttt 188  Q
    ||||||||||||||||||||||||||||||||||    
T  25016538 ctgctggaaaccattaagtacatctaatgatttt 25016505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 703834 - 703802
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||||||||    
T  703834 tgctggaaaccattaagtacatctaatgatttt 703802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 4951165 - 4951197
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||||||||    
T  4951165 tgctggaaaccattaagtacatctaatgatttt 4951197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 11376485 - 11376453
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||||||||    
T  11376485 tgctggaaaccattaagtacatctaatgatttt 11376453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 20134303 - 20134271
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||||||||    
T  20134303 tgctggaaaccattaagtacatctaatgatttt 20134271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 157 - 188
Target Start/End: Complemental strand, 18464659 - 18464628
Alignment:
Q  157 gctggaaaccattaagtacatctaatgatttt 188  Q
    ||||||||||||||||||||||||||||||||    
T  18464659 gctggaaaccattaagtacatctaatgatttt 18464628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 188
Target Start/End: Original strand, 13363540 - 13363570
Alignment:
Q  158 ctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||||||    
T  13363540 ctggaaaccattaagtacatctaatgatttt 13363570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 182
Target Start/End: Complemental strand, 16552487 - 16552457
Alignment:
Q  152 aaactgctggaaaccattaagtacatctaat 182  Q
    |||||||||||||||||||||||||||||||    
T  16552487 aaactgctggaaaccattaagtacatctaat 16552457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 188
Target Start/End: Complemental strand, 23335011 - 23334978
Alignment:
Q  155 ctgctggaaaccattaagtacatctaatgatttt 188  Q
    ||||||||||||||||||||||||||||| ||||    
T  23335011 ctgctggaaaccattaagtacatctaatggtttt 23334978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 3340719 - 3340751
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||| ||||    
T  3340719 tgctggaaaccattaagtacatctaatggtttt 3340751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 5630211 - 5630243
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||| ||||    
T  5630211 tgctggaaaccattaagtacatctaatggtttt 5630243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 7286894 - 7286926
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||| ||||    
T  7286894 tgctggaaaccattaagtacatctaatggtttt 7286926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 11660897 - 11660865
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||| ||||    
T  11660897 tgctggaaaccattaagtacatctaatggtttt 11660865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 34329782 - 34329818
Alignment:
Q  152 aaactgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||| ||||||||||||||||||||||||| ||||    
T  34329782 aaactgttggaaaccattaagtacatctaatggtttt 34329818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 36864208 - 36864240
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    ||||||||||||||||||| |||||||||||||    
T  36864208 tgctggaaaccattaagtatatctaatgatttt 36864240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 39861683 - 39861651
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||| ||||    
T  39861683 tgctggaaaccattaagtacatctaatggtttt 39861651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 166; Significance: 8e-89; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 20 - 229
Target Start/End: Complemental strand, 39658096 - 39657888
Alignment:
Q  20 gatgaatttgagagtggtagacgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaa 119  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  39658096 gatgaattcgagagtggtagatgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcgaaa 39657997  T
Q  120 tctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtac 219  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||  |||| ||||||||||||    
T  39657996 tctttgtgatgttagagggatttatggctgggaaactgcttgaaaccattaagtacatctaatggttttccacagcaaaat-tttttggcattccggtac 39657898  T
Q  220 ggtgatgatg 229  Q
    ||||||||||    
T  39657897 ggtgatgatg 39657888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 23 - 229
Target Start/End: Complemental strand, 4836191 - 4835985
Alignment:
Q  23 gaatttgagagtggtagacgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatct 122  Q
    ||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||| |||||| |||||||||||||||||||||| ||||||    
T  4836191 gaattcgagagtggtagatgatgtttatgtgattttatgtggtttagtgttcatgaggatcacagtttcaaatctgaagttgttactggattcgaaatct 4836092  T
Q  123 ttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggt 222  Q
    || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  4836091 ttgtgatattagagggatttatggctgggaaactgctggaaaccattaagtacatctaatggttttccacaacaaaatggttttggcattccggtacggt 4835992  T
Q  223 gatgatg 229  Q
    |||||||    
T  4835991 gatgatg 4835985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 23 - 229
Target Start/End: Complemental strand, 4841636 - 4841430
Alignment:
Q  23 gaatttgagagtggtagacgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatct 122  Q
    ||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||| |||||| |||||||||||||||||||||| ||||||    
T  4841636 gaattcgagagtggtagatgatgtttatgtgattttatgtggtttagtgttcatgaggatcacagtttcaaatctgaagttgttactggattcgaaatct 4841537  T
Q  123 ttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggt 222  Q
    || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  4841536 ttgtgatattagagggatttatggctgggaaactgctggaaaccattaagtacatctaatggttttccacaacaaaatggttttggcattccggtacggt 4841437  T
Q  223 gatgatg 229  Q
    |||||||    
T  4841436 gatgatg 4841430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 7058675 - 7058843
Alignment:
Q  20 gatgaatttgagagtggtagacgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaa 119  Q
    |||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  7058675 gatgaattcgagagtggtagatgatgtttatgtgattttatgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcgaaa 7058774  T
Q  120 tctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatctaatgatttt 188  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  7058775 tctttgtgatgttagagggatttatggttgggaaactgctggaaaccattaagtacatctaatggtttt 7058843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 20 - 188
Target Start/End: Original strand, 2750592 - 2750760
Alignment:
Q  20 gatgaatttgagagtggtagacgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaa 119  Q
    |||||||| ||||||| |||| ||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||| ||||| ||||| |||    
T  2750592 gatgaattcgagagtgatagatgatgtttatgtgattttatgtggtttagtgtttatgatgttcacggtttcagatctgaagtttttacttgattcgaaa 2750691  T
Q  120 tctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatctaatgatttt 188  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  2750692 tctttgtgatgttagagggatttatggctggaaaactgctggaaaccattaagtacatctaatggtttt 2750760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 7614500 - 7614608
Alignment:
Q  80 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 179  Q
    |||||||||||||||||||||||||||| ||||||| |||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7614500 gttcacggtttcagatctgaagttgttattggattcgaaatttttgtaatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 7614599  T
Q  180 aatgatttt 188  Q
    |||| ||||    
T  7614600 aatggtttt 7614608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 39022525 - 39022633
Alignment:
Q  80 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 179  Q
    |||||||||||||||| ||||||||||||||||||| |||||||| |||||||||| |||||||||||||| ||||| ||| ||||||||||||||||||    
T  39022525 gttcacggtttcagatatgaagttgttactggattcgaaatctttgtgatgttagatggatttatggctggaaaactactgaaaaccattaagtacatct 39022624  T
Q  180 aatgatttt 188  Q
    |||| ||||    
T  39022625 aatggtttt 39022633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 1209365 - 1209445
Alignment:
Q  20 gatgaatttgagagtggtagacgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatctgaa 100  Q
    |||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||    
T  1209365 gatgaattcgagagtggtagatgatgtttatgtgattttctatggtttagtgttcatgaggttcacagttttagatctgaa 1209445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 1209443 - 1209518
Alignment:
Q  151 gaaactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatg 226  Q
    |||||||||| |||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||    
T  1209443 gaaactgctgaaaaccattaagtacatctaatggttttccacagcaaaatggttttggcattccggtacggtgatg 1209518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 155 - 229
Target Start/End: Original strand, 8551103 - 8551177
Alignment:
Q  155 ctgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    |||||| ||| |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  8551103 ctgctgaaaatcattaagtacatctaatggttttccacaacaaaatggttttggcattccggtacggtgatgatg 8551177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 181
Target Start/End: Complemental strand, 15260367 - 15260266
Alignment:
Q  80 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 179  Q
    ||||||||||||| ||||||||||||||||  |||| |||||||| ||||||| ||||| ||||| |||| |||||| |||||||||| |||||||||||    
T  15260367 gttcacggtttcatatctgaagttgttactatattcgaaatctttgtgatgttggaggggtttatagctgagaaactactggaaaccactaagtacatct 15260268  T
Q  180 aa 181  Q
    ||    
T  15260267 aa 15260266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 153 - 229
Target Start/End: Original strand, 7058851 - 7058927
Alignment:
Q  153 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    ||||| ||||||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||||||    
T  7058851 aactgttggaaaccattaagtacatctaatggttttccacaggaaaatggttttggcattccggtacggtgatgatg 7058927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 229
Target Start/End: Original strand, 2750768 - 2750844
Alignment:
Q  153 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    |||||||| |||||||||||||||||||||| ||||||||| ||||||||||||  ||||||||||| |||||||||    
T  2750768 aactgctgcaaaccattaagtacatctaatggttttccacatcaaaatggttttgacattccggtactgtgatgatg 2750844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 80 - 124
Target Start/End: Complemental strand, 32986968 - 32986924
Alignment:
Q  80 gttcacggtttcagatctgaagttgttactggattcaaaatcttt 124  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  32986968 gttcacggtttcagatctgaagttgttactggattcgaaatcttt 32986924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 229
Target Start/End: Original strand, 2751065 - 2751108
Alignment:
Q  186 tttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    |||||||| |||||||||||| ||||||||||||||||||||||    
T  2751065 tttccacagcaaaatggttttagcattccggtacggtgatgatg 2751108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 226
Target Start/End: Original strand, 1209609 - 1209649
Alignment:
Q  186 tttccacaacaaaatggtttttgcattccggtacggtgatg 226  Q
    |||||||| |||||||||||| |||||||||||||||||||    
T  1209609 tttccacagcaaaatggttttggcattccggtacggtgatg 1209649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 23504597 - 23504565
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||||||||    
T  23504597 tgctggaaaccattaagtacatctaatgatttt 23504565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 186 - 229
Target Start/End: Original strand, 2750889 - 2750932
Alignment:
Q  186 tttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    |||||||| ||||||||||||| ||||||||||| |||||||||    
T  2750889 tttccacagcaaaatggttttttcattccggtactgtgatgatg 2750932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 186 - 229
Target Start/End: Original strand, 2750977 - 2751020
Alignment:
Q  186 tttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    |||||||| ||||||||||||| ||||||||||| |||||||||    
T  2750977 tttccacagcaaaatggttttttcattccggtactgtgatgatg 2751020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 188
Target Start/End: Original strand, 23397199 - 23397232
Alignment:
Q  155 ctgctggaaaccattaagtacatctaatgatttt 188  Q
    ||||||||||||||||||||||||||||| ||||    
T  23397199 ctgctggaaaccattaagtacatctaatggtttt 23397232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 226
Target Start/End: Complemental strand, 4835897 - 4835857
Alignment:
Q  186 tttccacaacaaaatggtttttgcattccggtacggtgatg 226  Q
    ||||||||  ||||||||||| |||||||||||||||||||    
T  4835897 tttccacagaaaaatggttttggcattccggtacggtgatg 4835857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 226
Target Start/End: Complemental strand, 4841342 - 4841302
Alignment:
Q  186 tttccacaacaaaatggtttttgcattccggtacggtgatg 226  Q
    ||||||||  ||||||||||| |||||||||||||||||||    
T  4841342 tttccacagaaaaatggttttggcattccggtacggtgatg 4841302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 15809780 - 15809812
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||| ||||    
T  15809780 tgctggaaaccattaagtacatctaatggtttt 15809812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 23567583 - 23567615
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    ||||| |||||||||||||||||||||||||||    
T  23567583 tgctgaaaaccattaagtacatctaatgatttt 23567615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 24472985 - 24472953
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||| ||||    
T  24472985 tgctggaaaccattaagtacatctaatggtttt 24472953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 27506810 - 27506778
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||| ||||    
T  27506810 tgctggaaaccattaagtacatctaatggtttt 27506778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 34343391 - 34343423
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||| ||||    
T  34343391 tgctggaaaccattaagtacatctaatggtttt 34343423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 35448550 - 35448582
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    ||||||||||||||||||||||||||| |||||    
T  35448550 tgctggaaaccattaagtacatctaataatttt 35448582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 183
Target Start/End: Original strand, 39022733 - 39022761
Alignment:
Q  155 ctgctggaaaccattaagtacatctaatg 183  Q
    |||||||||||||||||||||||||||||    
T  39022733 ctgctggaaaccattaagtacatctaatg 39022761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 45409510 - 45409478
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||| ||||    
T  45409510 tgctggaaaccattaagtacatctaatggtttt 45409478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 166; Significance: 8e-89; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 20 - 229
Target Start/End: Original strand, 638508 - 638717
Alignment:
Q  20 gatgaatttgagagtggtagacgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaa 119  Q
    |||||||| |||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  638508 gatgaattcgagagtggtagatgatgtttatgtgattttctgtcgtttcgtgttcatgaggttcacggtttcagatctaaagttgttactggattcaaaa 638607  T
Q  120 tctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtac 219  Q
    ||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||    
T  638608 tctttgtgatgttagagggatttatggctgggaaacagttggaaaccattaagtacatctaatggttttccacatcaaaatggttttggcattccggtac 638707  T
Q  220 ggtgatgatg 229  Q
    ||||||||||    
T  638708 ggtgatgatg 638717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 80 - 229
Target Start/End: Original strand, 45256465 - 45256614
Alignment:
Q  80 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 179  Q
    |||||||||||||||| |||||||||| |||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45256465 gttcacggtttcagatatgaagttgtttctggatttgaaatctttgtgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 45256564  T
Q  180 aatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    || | |||| |||| |||||||||||| |||||||||| |||||||||||    
T  45256565 aaaggttttgcacagcaaaatggttttggcattccggtccggtgatgatg 45256614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 18923812 - 18923920
Alignment:
Q  80 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 179  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  18923812 gttcacggtttcagatctgaagttgttactggattcgaaatctttgtgatgttagagggatttatggctgggaaactgctagaaatcattaagtacatct 18923911  T
Q  180 aatgatttt 188  Q
    |||||||||    
T  18923912 aatgatttt 18923920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 136 - 229
Target Start/End: Complemental strand, 26577672 - 26577579
Alignment:
Q  136 gggatttatggctgggaaactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26577672 gggatttatggctgggaaactgctggaaaccattaagtacatctaatgattttccacaacaaaatggttttggcattccggtacggtgatgatg 26577579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 4168911 - 4169019
Alignment:
Q  80 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 179  Q
    |||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  4168911 gttcacggtttcagatcttaagttgttactggattcgaaatctttgtgatgttagagggatttatggctgagaaactgctggaaaccattaagtacatct 4169010  T
Q  180 aatgatttt 188  Q
    |||| ||||    
T  4169011 aatggtttt 4169019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 51836700 - 51836592
Alignment:
Q  80 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 179  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||| || |||||||||||||||||||||    
T  51836700 gttcacggtttcagatctgaagttgttactggattcgaaatctttgtgatattagagggatttatggctgggaaattgttggaaaccattaagtacatct 51836601  T
Q  180 aatgatttt 188  Q
    |||| ||||    
T  51836600 aatggtttt 51836592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 22180755 - 22180649
Alignment:
Q  80 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 179  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||  |||||||||||||||||||||| ||||||||||||||||||||||    
T  22180755 gttcacggtttcagatctgaagttgttactggattcgaaatctttgtgatgtt--agggatttatggctgggaaactactggaaaccattaagtacatct 22180658  T
Q  180 aatgatttt 188  Q
    |||| ||||    
T  22180657 aatggtttt 22180649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 27764805 - 27764906
Alignment:
Q  87 gtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatctaatgatt 186  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||    
T  27764805 gtttcagatctgaagttgttactggattcgaaatctttgtgatgttagagggatttatggctggaaaactgttggaaaccattaagtacatctaatggtt 27764904  T
Q  187 tt 188  Q
    ||    
T  27764905 tt 27764906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 80 - 182
Target Start/End: Complemental strand, 36621334 - 36621232
Alignment:
Q  80 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 179  Q
    |||||||||||||||| |||| |||||||||||||  |||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  36621334 gttcacggtttcagatatgaatttgttactggatttgaaatctttgtgatgttagagggatttatggttgggaaactgatggaaaccattaagtacatct 36621235  T
Q  180 aat 182  Q
    |||    
T  36621234 aat 36621232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 21097668 - 21097776
Alignment:
Q  80 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 179  Q
    |||||| ||||||||||||||||||||||||||||  |||| ||| ||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||    
T  21097668 gttcacagtttcagatctgaagttgttactggatttgaaatttttgtgatgttagagagatttatggctgggaaactgctggaaatcattaagtatatct 21097767  T
Q  180 aatgatttt 188  Q
    |||| ||||    
T  21097768 aatggtttt 21097776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 153 - 220
Target Start/End: Original strand, 10473159 - 10473226
Alignment:
Q  153 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacg 220  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  10473159 aactgctggaaaccattaagtacatctaatggttttccacaacaaaatggttttggcattccggtacg 10473226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 153 - 228
Target Start/End: Complemental strand, 26446875 - 26446800
Alignment:
Q  153 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgat 228  Q
    ||||| ||||||||||||||||||||||||| ||||||| | |||||||||||| |||||||||||||||||||||    
T  26446875 aactgttggaaaccattaagtacatctaatggttttccatatcaaaatggttttggcattccggtacggtgatgat 26446800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 166 - 229
Target Start/End: Complemental strand, 51836573 - 51836510
Alignment:
Q  166 cattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    |||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||    
T  51836573 cattaagtacatctaatggttttccacagcaaaatggttttggcattccggtacggtgatgatg 51836510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 153 - 226
Target Start/End: Original strand, 38245558 - 38245631
Alignment:
Q  153 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatg 226  Q
    |||||| ||||||||||||||| |||||||| ||||||||  |||||||||||| |||||||||||||||||||    
T  38245558 aactgccggaaaccattaagtagatctaatggttttccacggcaaaatggttttggcattccggtacggtgatg 38245631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 229
Target Start/End: Original strand, 10473459 - 10473502
Alignment:
Q  186 tttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||    
T  10473459 tttccacaacaaaatagttttggcattccggtacggtgatgatg 10473502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 188
Target Start/End: Original strand, 27765022 - 27765055
Alignment:
Q  155 ctgctggaaaccattaagtacatctaatgatttt 188  Q
    ||||||||||||||||||||||||||||||||||    
T  27765022 ctgctggaaaccattaagtacatctaatgatttt 27765055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 8157214 - 8157182
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||||||||    
T  8157214 tgctggaaaccattaagtacatctaatgatttt 8157182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 52325243 - 52325275
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||||||||    
T  52325243 tgctggaaaccattaagtacatctaatgatttt 52325275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 153 - 188
Target Start/End: Original strand, 4169027 - 4169062
Alignment:
Q  153 aactgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||| |||||||||||||||||||||||    
T  4169027 aactgctggaaaacattaagtacatctaatgatttt 4169062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 186 - 229
Target Start/End: Original strand, 10473328 - 10473371
Alignment:
Q  186 tttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    |||||||| |||||||||||| |||||||||||| |||||||||    
T  10473328 tttccacagcaaaatggttttggcattccggtacagtgatgatg 10473371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 190 - 229
Target Start/End: Original strand, 38245738 - 38245777
Alignment:
Q  190 cacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    |||| |||||||||||| ||||||||||||||||||||||    
T  38245738 cacagcaaaatggttttggcattccggtacggtgatgatg 38245777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 189
Target Start/End: Complemental strand, 1728909 - 1728875
Alignment:
Q  155 ctgctggaaaccattaagtacatctaatgattttc 189  Q
    ||||||||||||||||||||||||||||| |||||    
T  1728909 ctgctggaaaccattaagtacatctaatggttttc 1728875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 188
Target Start/End: Original strand, 10473101 - 10473151
Alignment:
Q  138 gatttatggctgggaaactgctggaaaccattaagtacatctaatgatttt 188  Q
    ||||||||||| |||||||| || |||||||||| ||||||||||| ||||    
T  10473101 gatttatggctaggaaactgttgaaaaccattaactacatctaatggtttt 10473151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 228
Target Start/End: Original strand, 45256699 - 45256741
Alignment:
Q  186 tttccacaacaaaatggtttttgcattccggtacggtgatgat 228  Q
    |||| ||| |||||||||||| |||||||||||||||||||||    
T  45256699 tttctacagcaaaatggttttggcattccggtacggtgatgat 45256741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 188
Target Start/End: Original strand, 18924020 - 18924053
Alignment:
Q  155 ctgctggaaaccattaagtacatctaatgatttt 188  Q
    ||||||||||||||||||||||||||||| ||||    
T  18924020 ctgctggaaaccattaagtacatctaatggtttt 18924053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 188
Target Start/End: Original strand, 20862305 - 20862338
Alignment:
Q  155 ctgctggaaaccattaagtacatctaatgatttt 188  Q
    ||||||||||||||||| ||||||||||||||||    
T  20862305 ctgctggaaaccattaaatacatctaatgatttt 20862338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 188
Target Start/End: Original strand, 38010649 - 38010682
Alignment:
Q  155 ctgctggaaaccattaagtacatctaatgatttt 188  Q
    ||||||||||||||||||||||||||||| ||||    
T  38010649 ctgctggaaaccattaagtacatctaatggtttt 38010682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 2124448 - 2124416
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||| ||||    
T  2124448 tgctggaaaccattaagtacatctaatggtttt 2124416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 9813049 - 9813017
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    ||||||||| |||||||||||||||||||||||    
T  9813049 tgctggaaatcattaagtacatctaatgatttt 9813017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 10374184 - 10374216
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    ||||| |||||||||||||||||||||||||||    
T  10374184 tgctgaaaaccattaagtacatctaatgatttt 10374216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 16474926 - 16474894
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||| ||||    
T  16474926 tgctggaaaccattaagtacatctaatggtttt 16474894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 182
Target Start/End: Original strand, 38245516 - 38245544
Alignment:
Q  154 actgctggaaaccattaagtacatctaat 182  Q
    |||||||||||||||||||||||||||||    
T  38245516 actgctggaaaccattaagtacatctaat 38245544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 38563909 - 38563877
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||| ||||    
T  38563909 tgctggaaaccattaagtacatctaatggtttt 38563877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 184
Target Start/End: Complemental strand, 41025166 - 41025138
Alignment:
Q  156 tgctggaaaccattaagtacatctaatga 184  Q
    |||||||||||||||||||||||||||||    
T  41025166 tgctggaaaccattaagtacatctaatga 41025138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 47568025 - 47568057
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    ||||| |||||||||||||||||||||||||||    
T  47568025 tgctgaaaaccattaagtacatctaatgatttt 47568057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 51077001 - 51076969
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||| ||||||||||||||||    
T  51077001 tgctggaaaccattaaatacatctaatgatttt 51076969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 53526392 - 53526424
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||| ||||||||||||||||    
T  53526392 tgctggaaaccattaaatacatctaatgatttt 53526424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 54895523 - 54895555
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||| ||||    
T  54895523 tgctggaaaccattaagtacatctaatggtttt 54895555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 150; Significance: 3e-79; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 20 - 229
Target Start/End: Complemental strand, 33345860 - 33345651
Alignment:
Q  20 gatgaatttgagagtggtagacgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaa 119  Q
    ||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||  |||| |||    
T  33345860 gatgactttgagagtggtaaatgatgtttatgtgattttctgtggtttagtgttcatgaggtttacggtttcagatctgaatttgttactaaattcgaaa 33345761  T
Q  120 tctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtac 219  Q
    ||||| |||||||| ||||||||||| |||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  33345760 tctttgtgatgttaaagggatttatgactggcaaactgccggaaaccattaagtacatctaatggttttccacaacaaaatggttttggcattccggtac 33345661  T
Q  220 ggtgatgatg 229  Q
    ||||||||||    
T  33345660 ggtgatgatg 33345651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 20 - 229
Target Start/End: Complemental strand, 24737099 - 24736891
Alignment:
Q  20 gatgaatttgagagtggtagacgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaa 119  Q
    |||||||| |||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||    
T  24737099 gatgaattcgagagtggtagatgatgtttatgtgattttatgcggtttagtgttcatgaggttcacggtttcagatctgaagttgtta-tggattcgaaa 24737001  T
Q  120 tctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtac 219  Q
    ||||| |||||||||||| ||||||||| || |||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||  ||||    
T  24737000 tctttgtgatgttagaggaatttatggcgggaaaactgctggaaaccattaagtacatctaatggttttccacagcaaaatggttttggcattctagtac 24736901  T
Q  220 ggtgatgatg 229  Q
    ||||||||||    
T  24736900 ggtgatgatg 24736891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 23 - 229
Target Start/End: Original strand, 877769 - 877975
Alignment:
Q  23 gaatttgagagtggtagacgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatct 122  Q
    ||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||    
T  877769 gaattcgagagtggtagatgatgtttatgtgattttctatggtttagtgttcatgaggttcacagtttcagatttgaagttgttactggattcgaaatct 877868  T
Q  123 ttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggt 222  Q
    || |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||  | ||||||||| |||||| | ||||||    
T  877869 ttgtgatgttagagggatttatggctgggaaactgctggaaaccatttagtacatgtaatggttttccacagtataatggttttggcattctgatacggt 877968  T
Q  223 gatgatg 229  Q
    |||||||    
T  877969 gatgatg 877975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 229
Target Start/End: Original strand, 878063 - 878106
Alignment:
Q  186 tttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    ||||||||||||||||||||| |||||||||||| |||||||||    
T  878063 tttccacaacaaaatggttttggcattccggtacagtgatgatg 878106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 14237882 - 14237850
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||||||||    
T  14237882 tgctggaaaccattaagtacatctaatgatttt 14237850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 190 - 229
Target Start/End: Original strand, 878210 - 878249
Alignment:
Q  190 cacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    |||||||||||||||||  |||||||||||||||||||||    
T  878210 cacaacaaaatggttttgacattccggtacggtgatgatg 878249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 186 - 229
Target Start/End: Complemental strand, 24736803 - 24736760
Alignment:
Q  186 tttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    ||||||||||||||||||||| ||||||| ||||||||| ||||    
T  24736803 tttccacaacaaaatggttttggcattccagtacggtgaagatg 24736760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 188
Target Start/End: Original strand, 18611920 - 18611953
Alignment:
Q  155 ctgctggaaaccattaagtacatctaatgatttt 188  Q
    ||||||||||||||||||||||||||||| ||||    
T  18611920 ctgctggaaaccattaagtacatctaatggtttt 18611953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 188
Target Start/End: Original strand, 30909346 - 30909379
Alignment:
Q  155 ctgctggaaaccattaagtacatctaatgatttt 188  Q
    ||||||||||||||||||||||||||||| ||||    
T  30909346 ctgctggaaaccattaagtacatctaatggtttt 30909379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 25119210 - 25119178
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||| ||||    
T  25119210 tgctggaaaccattaagtacatctaatggtttt 25119178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 27079810 - 27079774
Alignment:
Q  152 aaactgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||| ||||||||||||||||||||||| ||||    
T  27079810 aaactgctagaaaccattaagtacatctaatggtttt 27079774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 145; Significance: 3e-76; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 15974433 - 15974265
Alignment:
Q  20 gatgaatttgagagtggtagacgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaa 119  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  15974433 gatgaattcgagagtggtagatgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggatttgaaa 15974334  T
Q  120 tctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatctaatgatttt 188  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15974333 tctttgtgatgttagatggatttatggctgggaaactgctggaaaccattaagtacatctaatgatttt 15974265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 30430266 - 30430374
Alignment:
Q  80 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 179  Q
    ||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  30430266 gttcacggtttcagagctgaagttgttactggattcgaaatctttgtgatgttagagggatttatggttgggaaactgttggaaaccattaagtacatct 30430365  T
Q  180 aatgatttt 188  Q
    |||||||||    
T  30430366 aatgatttt 30430374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 33798359 - 33798467
Alignment:
Q  80 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 179  Q
    |||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||    
T  33798359 gttcacggtttcagatctgaagttgttactggattcgaaatttttgtgatgttagagagatttatggctggaaaactgctggaaaccattaagtatatct 33798458  T
Q  180 aatgatttt 188  Q
    |||| ||||    
T  33798459 aatggtttt 33798467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 46024586 - 46024693
Alignment:
Q  80 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 179  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| | ||||||||||||||||||||    
T  46024586 gttcacggttttagatctgaagttgttactggattcaaaatctttgtgatgttagagggatttatggct-ggaaactcccggaaaccattaagtacatct 46024684  T
Q  180 aatgatttt 188  Q
    |||| ||||    
T  46024685 aatggtttt 46024693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 80 - 181
Target Start/End: Complemental strand, 46573080 - 46572980
Alignment:
Q  80 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 179  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||| | ||||||||||||||    
T  46573080 gttcacggtttcagatctgaagttgttactg-attcaaaatctttgtgatgttagagggatttatggctaggaaactgctggagatcattaagtacatct 46572982  T
Q  180 aa 181  Q
    ||    
T  46572981 aa 46572980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 48305880 - 48305960
Alignment:
Q  20 gatgaatttgagagtggtagacgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatctgaa 100  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48305880 gatgaattcgagagtggtagatgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatctgaa 48305960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 153 - 229
Target Start/End: Complemental strand, 15974257 - 15974181
Alignment:
Q  153 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    ||||||||||||||||||||||||||||||| ||||||||  |||||||||||| ||||||||||||||||||||||    
T  15974257 aactgctggaaaccattaagtacatctaatggttttccacggcaaaatggttttggcattccggtacggtgatgatg 15974181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 48691571 - 48691651
Alignment:
Q  20 gatgaatttgagagtggtagacgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatctgaa 100  Q
    |||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  48691571 gatgaattcgagagtggtagataatgtttatgtgattttctgtggtttagtgttcatgaggctcacgatttcagatctgaa 48691651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 46572965 - 46572891
Alignment:
Q  153 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatga 227  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||| ||||||||||||    
T  46572965 aactgctggaaaccattaagtacatctaatggttttccacagcaaaatggttttggcattccagtacggtgatga 46572891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 48691700 - 48691770
Alignment:
Q  159 tggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||    
T  48691700 tggaaaccattaagtacatctaatggttttccacagcaaaatggttttggcattccggtacggtgatgatg 48691770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 229
Target Start/End: Original strand, 48306003 - 48306079
Alignment:
Q  153 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    ||||| ||||||||||||||||||||||| | ||||||||| |||||||||||| |||||| |||||||||||||||    
T  48306003 aactgttggaaaccattaagtacatctaacggttttccacagcaaaatggttttggcattctggtacggtgatgatg 48306079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 229
Target Start/End: Complemental strand, 46572807 - 46572764
Alignment:
Q  186 tttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  46572807 tttccacaacaaaatggttttggcattccggtacggtgatgatg 46572764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 229
Target Start/End: Complemental strand, 15974093 - 15974050
Alignment:
Q  186 tttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    |||||||| |||||||||||| ||||||||||||||||||||||    
T  15974093 tttccacagcaaaatggttttggcattccggtacggtgatgatg 15974050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 153 - 188
Target Start/End: Original strand, 33798475 - 33798510
Alignment:
Q  153 aactgctggaaaccattaagtacatctaatgatttt 188  Q
    ||||||||||||||||||||||||||||||| ||||    
T  33798475 aactgctggaaaccattaagtacatctaatggtttt 33798510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 186 - 229
Target Start/End: Original strand, 48691861 - 48691904
Alignment:
Q  186 tttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    |||||||| ||||||||||||  |||||||||||||||||||||    
T  48691861 tttccacagcaaaatggttttgacattccggtacggtgatgatg 48691904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 188
Target Start/End: Original strand, 24360521 - 24360554
Alignment:
Q  155 ctgctggaaaccattaagtacatctaatgatttt 188  Q
    ||||||||||||||||||||||||||||| ||||    
T  24360521 ctgctggaaaccattaagtacatctaatggtttt 24360554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 188
Target Start/End: Original strand, 32091287 - 32091320
Alignment:
Q  155 ctgctggaaaccattaagtacatctaatgatttt 188  Q
    ||||||||||||||||||||||||||||| ||||    
T  32091287 ctgctggaaaccattaagtacatctaatggtttt 32091320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 188
Target Start/End: Original strand, 46024793 - 46024826
Alignment:
Q  155 ctgctggaaaccattaagtacatctaatgatttt 188  Q
    ||||||||||||||||||||||||||||| ||||    
T  46024793 ctgctggaaaccattaagtacatctaatggtttt 46024826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Original strand, 48305958 - 48305995
Alignment:
Q  151 gaaactgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||| |||||||| ||||    
T  48305958 gaaactgctggaaaccattaagtatatctaatggtttt 48305995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 189
Target Start/End: Original strand, 5758055 - 5758087
Alignment:
Q  157 gctggaaaccattaagtacatctaatgattttc 189  Q
    ||||||||||||||||||||||||||| |||||    
T  5758055 gctggaaaccattaagtacatctaatggttttc 5758087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 6620738 - 6620770
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||| ||||    
T  6620738 tgctggaaaccattaagtacatctaatggtttt 6620770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 44426739 - 44426771
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||| ||||    
T  44426739 tgctggaaaccattaagtacatctaatggtttt 44426771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 1e-44; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 14550858 - 14550755
Alignment:
Q  126 tgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgat 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||    
T  14550858 tgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatctaatggttttccacaacaaaatggttttggcattccggtatggtgat 14550759  T
Q  226 gatg 229  Q
    ||||    
T  14550758 gatg 14550755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 20710318 - 20710426
Alignment:
Q  80 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 179  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  20710318 gttcacggtttcagatctgaagttgttactggattcgaaatctttgtgatgttagagggatttatggctgagaaactgctggaaaccattaagtgcatct 20710417  T
Q  180 aatgatttt 188  Q
    |||| ||||    
T  20710418 aatggtttt 20710426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 18297688 - 18297580
Alignment:
Q  80 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 179  Q
    ||||||||||||||||||||||||||||| ||||||  ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18297688 gttcacggtttcagatctgaagttgttacaggattcttaatctttgtgatgttagagggatttatagctgggaaactgctggaaaccattaagtacatct 18297589  T
Q  180 aatgatttt 188  Q
    |||| ||||    
T  18297588 aatggtttt 18297580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 136 - 229
Target Start/End: Original strand, 2264153 - 2264246
Alignment:
Q  136 gggatttatggctgggaaactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||    
T  2264153 gggatttatgactgggaaactgctggaaaccattaagtacatctaatggttttccacagcaaaatggttttggcattccggtacggtgatgatg 2264246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 4579305 - 4579228
Alignment:
Q  20 gatgaatttgagagtggtagacgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatct 97  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4579305 gatgaattcgagagtggtagatgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatct 4579228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 153 - 229
Target Start/End: Original strand, 25193495 - 25193571
Alignment:
Q  153 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  25193495 aactgctggaaaccattaagtacatctaatggttttccacaacaaaatggttttggcattccggtacggtgatgatg 25193571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 152 - 229
Target Start/End: Complemental strand, 4579226 - 4579149
Alignment:
Q  152 aaactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    ||||||||||||||||||||||| |||||||| ||||||||| ||||||| |||| ||||||||||||||||||||||    
T  4579226 aaactgctggaaaccattaagtatatctaatggttttccacagcaaaatgattttggcattccggtacggtgatgatg 4579149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 153 - 229
Target Start/End: Complemental strand, 18297572 - 18297496
Alignment:
Q  153 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    ||||||||||||||||||||||||||||||| ||||||| | |||||||||||| |||||| |||||||||||||||    
T  18297572 aactgctggaaaccattaagtacatctaatggttttccatagcaaaatggttttggcattcaggtacggtgatgatg 18297496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 229
Target Start/End: Original strand, 2264465 - 2264508
Alignment:
Q  186 tttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  2264465 tttccacaacaaaatggttttggcattccggtacggtgatgatg 2264508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 4579051 - 4579009
Alignment:
Q  187 ttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    ||||||| |||||||||||| ||||||||||||||||||||||    
T  4579051 ttccacagcaaaatggttttggcattccggtacggtgatgatg 4579009  T

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Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 186 - 229
Target Start/End: Complemental strand, 14550655 - 14550612
Alignment:
Q  186 tttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    |||||||| |||||||||||| |||||||| |||||||||||||    
T  14550655 tttccacagcaaaatggttttggcattccgatacggtgatgatg 14550612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 186 - 229
Target Start/End: Complemental strand, 18297408 - 18297365
Alignment:
Q  186 tttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    |||||||| ||||||||||||  |||||||||||||||||||||    
T  18297408 tttccacagcaaaatggttttgacattccggtacggtgatgatg 18297365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 4578791 - 4578749
Alignment:
Q  187 ttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    ||||||| |||||||||||| |||||| |||||||||||||||    
T  4578791 ttccacagcaaaatggttttggcattcaggtacggtgatgatg 4578749  T

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Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 4578921 - 4578879
Alignment:
Q  187 ttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    ||||||| |||||||||||| |||||||||||| |||||||||    
T  4578921 ttccacagcaaaatggttttggcattccggtacagtgatgatg 4578879  T

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Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 188
Target Start/End: Complemental strand, 4281121 - 4281088
Alignment:
Q  155 ctgctggaaaccattaagtacatctaatgatttt 188  Q
    ||||||||||||||||||||||||||||| ||||    
T  4281121 ctgctggaaaccattaagtacatctaatggtttt 4281088  T

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Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 188
Target Start/End: Complemental strand, 41345375 - 41345342
Alignment:
Q  155 ctgctggaaaccattaagtacatctaatgatttt 188  Q
    ||||||||||||||||||||||||||||| ||||    
T  41345375 ctgctggaaaccattaagtacatctaatggtttt 41345342  T

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Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 1095283 - 1095251
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||| ||||    
T  1095283 tgctggaaaccattaagtacatctaatggtttt 1095251  T

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Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 12449158 - 12449126
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||| ||||    
T  12449158 tgctggaaaccattaagtacatctaatggtttt 12449126  T

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Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 22596408 - 22596376
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||| ||||    
T  22596408 tgctggaaaccattaagtacatctaatggtttt 22596376  T

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Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 25575427 - 25575395
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||| ||||    
T  25575427 tgctggaaaccattaagtacatctaatggtttt 25575395  T

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Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 30777451 - 30777419
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||| ||||    
T  30777451 tgctggaaaccattaagtacatctaatggtttt 30777419  T

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Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 42364633 - 42364665
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||| ||||    
T  42364633 tgctggaaaccattaagtacatctaatggtttt 42364665  T

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Target: scaffold0238 (Bit Score: 90; Significance: 2e-43; HSPs: 3)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 80 - 181
Target Start/End: Complemental strand, 24828 - 24727
Alignment:
Q  80 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 179  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24828 gttcacggtttcagatctgaagttgttactggattcgaaatctttgtgatgttagagggatttatggctgggaaactgctgaaaaccattaagtacatct 24729  T
Q  180 aa 181  Q
    ||    
T  24728 aa 24727  T

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Target: scaffold0238; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 227
Target Start/End: Complemental strand, 24559 - 24518
Alignment:
Q  186 tttccacaacaaaatggtttttgcattccggtacggtgatga 227  Q
    |||||||| |||||||||||| ||||||||||||||||||||    
T  24559 tttccacagcaaaatggttttggcattccggtacggtgatga 24518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 24703 - 24659
Alignment:
Q  185 ttttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    ||||||||| |||||||||||| ||||||||||||||||| ||||    
T  24703 ttttccacagcaaaatggttttggcattccggtacggtgaagatg 24659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 89; Significance: 7e-43; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 28157 - 28265
Alignment:
Q  80 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 179  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  28157 gttcacggtttcagatctgaagttgttactagattcaaaatctttgtgatgttagagggatttatgactgggaaactggtggaaaccattaagtacatct 28256  T
Q  180 aatgatttt 188  Q
    |||| ||||    
T  28257 aatggtttt 28265  T

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Target: scaffold0097 (Bit Score: 89; Significance: 7e-43; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 14157 - 14265
Alignment:
Q  80 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatct 179  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  14157 gttcacggtttcagatctgaagttgttactggattcgaaatctttgtgatgttagagggatttatggctgagaaactgctggaaaccattaagtgcatct 14256  T
Q  180 aatgatttt 188  Q
    |||| ||||    
T  14257 aatggtttt 14265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 92 - 188
Target Start/End: Complemental strand, 203453 - 203357
Alignment:
Q  92 agatctgaagttgttactggattcaaaatctttatgatgttagagggatttatggctgggaaactgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||| ||||| ||| ||| |||||||||||||||||| ||||    
T  203453 agatctgaagttgttactcgattcgaaatctttgtgatgttagagggatttatggctggaaaactcctgaaaatcattaagtacatctaatggtttt 203357  T

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Target: scaffold0338 (Bit Score: 57; Significance: 9e-24; HSPs: 3)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 153 - 229
Target Start/End: Original strand, 6171 - 6247
Alignment:
Q  153 aactgctggaaaccattaagtacatctaatgattttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    ||||| ||||||| ||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  6171 aactgttggaaactattaagtacatataatggttttccacaacaaaatggttttggcattccggtacggtgatgatg 6247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 229
Target Start/End: Original strand, 6335 - 6378
Alignment:
Q  186 tttccacaacaaaatggtttttgcattccggtacggtgatgatg 229  Q
    |||||||| |||||||||||| ||||||||||||||||||||||    
T  6335 tttccacagcaaaatggttttggcattccggtacggtgatgatg 6378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 151 - 188
Target Start/End: Original strand, 6126 - 6163
Alignment:
Q  151 gaaactgctggaaaccattaagtacatctaatgatttt 188  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  6126 gaaactgctggaaaccattaagtacatctaatggtttt 6163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 96139 - 96171
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||||||||    
T  96139 tgctggaaaccattaagtacatctaatgatttt 96171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 23648 - 23616
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||| ||||    
T  23648 tgctggaaaccattaagtacatctaatggtttt 23616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 20024 - 19992
Alignment:
Q  156 tgctggaaaccattaagtacatctaatgatttt 188  Q
    |||||||||||||||||||||||||||| ||||    
T  20024 tgctggaaaccattaagtacatctaatggtttt 19992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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