View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0757_low_11 (Length: 314)
Name: NF0757_low_11
Description: NF0757
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0757_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 9 - 222
Target Start/End: Complemental strand, 28433236 - 28433023
Alignment:
| Q |
9 |
atcatgttacacgaatcaggcttaaagaactgttgttaaaatcaaaataaatgacatatcaaccacattatctgactttatacacagcattcgtaaactc |
108 |
Q |
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| T |
28433236 |
atcatgttacacgaatcaggcttaaagaactgttgttaaaatcaaaataaatgacatatcaaccacattatctgactttatacacagcattcgtaaactc |
28433137 |
T |
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| Q |
109 |
agcagggaaaagaatcaaaaccaacaacaaccgaagcctttttccaaccaggtagattcaaatataaaatacacacacacatgcacgcgcgcggatcaaa |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28433136 |
agcagggaaaagaatcaaaaccaacaacaaccgaagcctttttccaaccaggtagattcaaatataaaatacacacacacatgcacgcgcgcggatcaaa |
28433037 |
T |
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| Q |
209 |
cagcaccatattgt |
222 |
Q |
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|||||||||||||| |
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| T |
28433036 |
cagcaccatattgt |
28433023 |
T |
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