View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0757_low_20 (Length: 232)

Name: NF0757_low_20
Description: NF0757
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0757_low_20
NF0757_low_20
[»] chr6 (8 HSPs)
chr6 (21-104)||(34964995-34965078)
chr6 (25-107)||(22468132-22468214)
chr6 (21-107)||(29162939-29163025)
chr6 (25-82)||(15006679-15006736)
chr6 (21-96)||(19852329-19852404)
chr6 (21-107)||(22595685-22595770)
chr6 (37-107)||(15295515-15295586)
chr6 (28-107)||(16131326-16131406)
[»] chr3 (12 HSPs)
chr3 (21-108)||(43429561-43429648)
chr3 (21-107)||(15551920-15552006)
chr3 (25-107)||(17320602-17320684)
chr3 (21-107)||(6817657-6817743)
chr3 (21-107)||(5230636-5230722)
chr3 (21-107)||(17760828-17760914)
chr3 (21-107)||(19062148-19062234)
chr3 (21-107)||(21168728-21168814)
chr3 (21-107)||(41659679-41659765)
chr3 (29-107)||(18968148-18968226)
chr3 (63-106)||(31416269-31416312)
chr3 (21-58)||(22637393-22637430)
[»] chr7 (11 HSPs)
chr7 (21-107)||(17948050-17948136)
chr7 (25-107)||(9641119-9641201)
chr7 (21-107)||(9323082-9323168)
chr7 (25-107)||(4482336-4482417)
chr7 (23-102)||(31499313-31499392)
chr7 (63-107)||(21677548-21677592)
chr7 (21-87)||(12245755-12245822)
chr7 (29-104)||(14938780-14938855)
chr7 (29-104)||(15366373-15366448)
chr7 (60-91)||(15980553-15980584)
chr7 (23-82)||(33557966-33558025)
[»] chr4 (8 HSPs)
chr4 (21-107)||(50224180-50224266)
chr4 (25-107)||(13596044-13596126)
chr4 (21-107)||(47470357-47470444)
chr4 (21-107)||(41919273-41919359)
chr4 (21-107)||(19557394-19557480)
chr4 (21-107)||(15216265-15216351)
chr4 (21-107)||(10239465-10239551)
chr4 (60-107)||(24237010-24237057)
[»] chr1 (8 HSPs)
chr1 (21-107)||(41213683-41213769)
chr1 (25-107)||(5770220-5770302)
chr1 (25-107)||(33383989-33384071)
chr1 (21-107)||(40555439-40555524)
chr1 (21-107)||(21041856-21041941)
chr1 (25-107)||(40438355-40438437)
chr1 (21-107)||(5472417-5472502)
chr1 (29-104)||(50001972-50002047)
[»] chr8 (12 HSPs)
chr8 (26-107)||(22499329-22499410)
chr8 (21-107)||(17264560-17264646)
chr8 (25-107)||(23118865-23118947)
chr8 (21-107)||(18043176-18043262)
chr8 (21-107)||(33170315-33170400)
chr8 (21-107)||(23216718-23216804)
chr8 (25-107)||(7468366-7468448)
chr8 (25-107)||(20707855-20707937)
chr8 (21-107)||(45561730-45561816)
chr8 (21-107)||(24554599-24554685)
chr8 (21-105)||(17499921-17500004)
chr8 (21-95)||(25607962-25608036)
[»] chr2 (4 HSPs)
chr2 (25-107)||(6092519-6092601)
chr2 (25-107)||(25132286-25132368)
chr2 (21-107)||(24272112-24272198)
chr2 (21-102)||(30995012-30995090)
[»] scaffold0004 (2 HSPs)
scaffold0004 (25-107)||(84491-84573)
scaffold0004 (21-107)||(25616-25702)
[»] chr5 (7 HSPs)
chr5 (25-107)||(23236433-23236515)
chr5 (21-107)||(5623441-5623527)
chr5 (21-104)||(11963659-11963742)
chr5 (26-107)||(26561810-26561891)
chr5 (32-107)||(19871987-19872062)
chr5 (29-107)||(29912119-29912197)
chr5 (48-107)||(3420855-3420914)
[»] scaffold0442 (2 HSPs)
scaffold0442 (21-107)||(1992-2077)
scaffold0442 (21-71)||(14159-14208)
[»] scaffold0003 (1 HSPs)
scaffold0003 (25-107)||(99215-99298)
[»] scaffold0138 (1 HSPs)
scaffold0138 (21-107)||(18694-18779)
[»] scaffold0327 (1 HSPs)
scaffold0327 (21-68)||(6948-6995)
[»] scaffold0013 (1 HSPs)
scaffold0013 (26-107)||(16707-16789)
[»] scaffold0022 (1 HSPs)
scaffold0022 (42-107)||(129964-130029)
[»] scaffold0047 (1 HSPs)
scaffold0047 (21-101)||(2148-2226)


Alignment Details
Target: chr6 (Bit Score: 72; Significance: 7e-33; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 34964995 - 34965078
Alignment:
Q  21 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaata 104  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  34964995 acatcatcataaaaattctctaaatcccgacaaatgggaaaatctccacaacataaataaatccagaataaacaatctagaata 34965078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 22468214 - 22468132
Alignment:
Q  25 catcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    |||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22468214 catcataaaaattctccaaatcccgacaaatggacaaatctccacaacataaataaatccagaataaacaatctagaataatc 22468132  T

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Target: chr6; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 29163025 - 29162939
Alignment:
Q  21 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    |||||||| || |||||||  ||||| ||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  29163025 acatcatcgtataaattcttcaaatctcgaaaaatgggcaaaactccacaacataaataaatccagaataaacaatctagaataatc 29162939  T

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Target: chr6; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 15006736 - 15006679
Alignment:
Q  25 catcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaat 82  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  15006736 catcataaaaattctcgaaatcccgacaaatgggcaaatctccacaacataaataaat 15006679  T

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Target: chr6; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 19852329 - 19852404
Alignment:
Q  21 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaat 96  Q
    |||||||||||||||||||| ||||| ||||||||||| ||||||||| || |||||||||| || ||||||||||    
T  19852329 acatcatcataaaaattctccaaatcccgacaaatgggtaaatctccaaaatataaataaatccaaaataaacaat 19852404  T

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Target: chr6; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 22595770 - 22595685
Alignment:
Q  21 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    ||||||||||| |||||||| ||| | ||||||||||| ||||||||| ||||||||| || | |||||||||||||||||||||||    
T  22595770 acatcatcatataaattctccaaaccccgacaaatgggtaaatctccaaaacataaat-aagtaagaataaacaatctagaataatc 22595685  T

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Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 37 - 107
Target Start/End: Complemental strand, 15295586 - 15295515
Alignment:
Q  37 tctctaaatcacgacaaatgggcaaa-tctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    |||| ||||| ||||||||||| ||| ||| |||||||||||||||| |||||||| |||||||||||||||    
T  15295586 tctccaaatcccgacaaatgggtaaaatcttcacaacataaataaatccagaataatcaatctagaataatc 15295515  T

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Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 107
Target Start/End: Original strand, 16131326 - 16131406
Alignment:
Q  28 cataaaaattctctaaatcacgacaaatgggcaaa-tctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    |||| ||| |||| ||||| ||||| ||||||||| ||||||||||||||| |||| |||| ||| |||||||||||||||    
T  16131326 catataaaatctccaaatcccgacatatgggcaaaatctccacaacataaacaaatccagattaatcaatctagaataatc 16131406  T

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Target: chr3 (Bit Score: 72; Significance: 7e-33; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 21 - 108
Target Start/End: Complemental strand, 43429648 - 43429561
Alignment:
Q  21 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatct 108  Q
    |||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  43429648 acatcatcataaaaattctccaaatcccaacaaatgggcaaatctccacaacataaataaatccagaataaacaatctagaataatct 43429561  T

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Target: chr3; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 15552006 - 15551920
Alignment:
Q  21 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||    
T  15552006 acatcatcatataaattctctaaatcccgacaaatgggcaaatctccacaacataaataagtctagaataaacaatctagaataatc 15551920  T

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Target: chr3; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 17320684 - 17320602
Alignment:
Q  25 catcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  17320684 catcataaaaattctccaaatcccgacaaatgggcaaatctccacaacataaataaatccaaaataaacaatctagaataatc 17320602  T

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Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 6817743 - 6817657
Alignment:
Q  21 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    ||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||    
T  6817743 acatcatcatataaattctccaaatcccgacaaatgggcaaatcttcacaacataaataaatccaaaataaacaatctagaataatc 6817657  T

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Target: chr3; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 5230722 - 5230636
Alignment:
Q  21 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    ||||||||||| ||| |||| ||||| ||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||    
T  5230722 acatcatcatataaaatctccaaatcccgacaaatgggtaaatctccacaacataaataaatatagaataaacaatctagaataatc 5230636  T

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Target: chr3; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 17760914 - 17760828
Alignment:
Q  21 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    ||||||||||| |||||||| ||||| |||||||| |||||||||| ||||||||||||||| || |||||||||||||||||||||    
T  17760914 acatcatcatataaattctccaaatctcgacaaattggcaaatctcaacaacataaataaatccataataaacaatctagaataatc 17760828  T

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Target: chr3; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 19062234 - 19062148
Alignment:
Q  21 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    ||||||||||| |||||||| ||||| |||||||| |||||||||| ||||||||||||||| || |||||||||||||||||||||    
T  19062234 acatcatcatataaattctccaaatctcgacaaattggcaaatctcaacaacataaataaatccataataaacaatctagaataatc 19062148  T

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Target: chr3; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 21168814 - 21168728
Alignment:
Q  21 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    |||||||||||||||||||| ||||| ||||||||||| ||||||||| ||||||||||||| || ||||||||| ||||| |||||    
T  21168814 acatcatcataaaaattctccaaatcccgacaaatgggtaaatctccaaaacataaataaatccacaataaacaacctagagtaatc 21168728  T

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Target: chr3; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 21 - 107
Target Start/End: Original strand, 41659679 - 41659765
Alignment:
Q  21 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    |||||||||||||||||||| ||||| ||||||||||| ||||||||| || |||||||||| || ||||||||||||||| |||||    
T  41659679 acatcatcataaaaattctccaaatcccgacaaatgggtaaatctccaaaatataaataaatccaaaataaacaatctagagtaatc 41659765  T

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Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 107
Target Start/End: Original strand, 18968148 - 18968226
Alignment:
Q  29 ataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    |||||||||||| ||||| |||||| ||||||||||||||  |||||||||||| || || ||| |||||||| |||||    
T  18968148 ataaaaattctccaaatcccgacaagtgggcaaatctccaacacataaataaatccacaacaaataatctagagtaatc 18968226  T

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Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 31416312 - 31416269
Alignment:
Q  63 tctccacaacataaataaattcagaataaacaatctagaataat 106  Q
    ||||||||||||||||||||  ||||||||||||||||||||||    
T  31416312 tctccacaacataaataaatctagaataaacaatctagaataat 31416269  T

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Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 22637393 - 22637430
Alignment:
Q  21 acatcatcataaaaattctctaaatcacgacaaatggg 58  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  22637393 acatcatcataaaaattctccaaatcccgacaaatggg 22637430  T

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Target: chr7 (Bit Score: 71; Significance: 3e-32; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 17948136 - 17948050
Alignment:
Q  21 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  17948136 acatcatcataaaaattctccaaatcccgacaaatgggcaaatctcaacaacataaataaatccagaataaacaatctagaataatc 17948050  T

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Target: chr7; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 9641119 - 9641201
Alignment:
Q  25 catcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    |||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9641119 catcataaaaattctccaaatcccgataaatgggcaaatctccacaacataaataaatccagaataaacaatctagaataatc 9641201  T

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Target: chr7; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 9323168 - 9323082
Alignment:
Q  21 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    |||||| |||||||||| |  ||||| ||||||||||| ||||||||||||||||||||||| || |||||| ||||||||||||||    
T  9323168 acatcaacataaaaattattcaaatcccgacaaatgggaaaatctccacaacataaataaatccacaataaaaaatctagaataatc 9323082  T

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Target: chr7; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 4482336 - 4482417
Alignment:
Q  25 catcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    |||||||||| ||||| ||||| |||||||||||||||||||||| |  ||||||||| || |||||||||||||||||||||    
T  4482336 catcataaaagttctccaaatcccgacaaatgggcaaatctccac-atgtaaataaatccaaaataaacaatctagaataatc 4482417  T

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Target: chr7; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 102
Target Start/End: Original strand, 31499313 - 31499392
Alignment:
Q  23 atcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaa 102  Q
    |||| ||||||||||||| ||||| |||||| |||| ||||||||||||||||||||||| || ||  ||||||||||||    
T  31499313 atcaacataaaaattctcaaaatcccgacaattgggtaaatctccacaacataaataaatccaaaacgaacaatctagaa 31499392  T

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Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 107
Target Start/End: Complemental strand, 21677592 - 21677548
Alignment:
Q  63 tctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    ||||| |||||||||||||| ||||||||||||| ||||||||||    
T  21677592 tctcctcaacataaataaatccagaataaacaatatagaataatc 21677548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 12245755 - 12245822
Alignment:
Q  21 acatcatcataaaaattctctaaatcacgacaaatgggc-aaatctccacaacataaataaattcaga 87  Q
    ||||||||||| ||| |||| ||||| ||||| |||||| ||||||||| ||||||||||||| ||||    
T  12245755 acatcatcatataaaatctccaaatcccgacatatgggcaaaatctccataacataaataaatccaga 12245822  T

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Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 104
Target Start/End: Original strand, 14938780 - 14938855
Alignment:
Q  29 ataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaata 104  Q
    ||||||||||||| |||| | |||| ||||||||||||||  |||||||||||| || || | | |||||||||||    
T  14938780 ataaaaattctctgaatcccaacaagtgggcaaatctccaacacataaataaatccacaacagataatctagaata 14938855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 104
Target Start/End: Original strand, 15366373 - 15366448
Alignment:
Q  29 ataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaata 104  Q
    ||||||||||||| |||| | |||| ||||||||||||||  |||||||||||| || || | | |||||||||||    
T  15366373 ataaaaattctctgaatcccaacaagtgggcaaatctccaacacataaataaatccacaacagataatctagaata 15366448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 91
Target Start/End: Complemental strand, 15980584 - 15980553
Alignment:
Q  60 aaatctccacaacataaataaattcagaataa 91  Q
    ||||||||||||||||||||||||||||||||    
T  15980584 aaatctccacaacataaataaattcagaataa 15980553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 82
Target Start/End: Original strand, 33557966 - 33558025
Alignment:
Q  23 atcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaat 82  Q
    |||| ||||||||||||| ||||| |||||  |||| |||||||||||||| ||||||||    
T  33557966 atcaacataaaaattctccaaatcccgacatttgggtaaatctccacaacaaaaataaat 33558025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 3e-32; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 50224266 - 50224180
Alignment:
Q  21 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    |||||| ||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  50224266 acatcaacataaaaattctccaaatcccgacaaatggacaaatctccacaacataaataaattcagaataaacaatctagaataatc 50224180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 13596126 - 13596044
Alignment:
Q  25 catcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    |||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13596126 catcataaaaattctccaaatcccgataaatgggcaaatctccacaacataaataaatccagaataaacaatctagaataatc 13596044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 47470444 - 47470357
Alignment:
Q  21 acatcatcataaaaa-ttctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    ||||||||||||||| ||||| ||||| ||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||    
T  47470444 acatcatcataaaaaattctccaaatctcgacaaatgggaaaatctccacaacataaataaatccagagtaaacaatctagaataatc 47470357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 41919359 - 41919273
Alignment:
Q  21 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    ||||||||||| ||| |||  ||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  41919359 acatcatcatataaaatcttaaaatcccgacaaatgggcaaatatccacaacataaataaatccagaataaacaatctagaataatc 41919273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 21 - 107
Target Start/End: Original strand, 19557394 - 19557480
Alignment:
Q  21 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    |||||||||||||||||||| ||||| | | ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||||    
T  19557394 acatcatcataaaaattctccaaatcccaaaaaatgggtaaatctccacatcagaaataaatccagaataaacaatctagaataatc 19557480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 15216351 - 15216265
Alignment:
Q  21 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    ||||||||||| |||||||| ||||| |||||| |||| || |||||||||||||||||| | ||||||||| ||||||||||||||    
T  15216351 acatcatcatataaattctccaaatcccgacaattgggaaagtctccacaacataaataagtccagaataaaaaatctagaataatc 15216265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 10239551 - 10239465
Alignment:
Q  21 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    |||||| ||||||||||||  ||||  |||||| |||| |||||||||||||| |||||||| || |||||||||||||||||||||    
T  10239551 acatcaacataaaaattcttcaaattccgacaattgggtaaatctccacaacacaaataaatccaaaataaacaatctagaataatc 10239465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 107
Target Start/End: Original strand, 24237010 - 24237057
Alignment:
Q  60 aaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    ||||||||||||||||||||||  |||||||| |||||||||||||||    
T  24237010 aaatctccacaacataaataaacccagaataatcaatctagaataatc 24237057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 3e-32; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 41213769 - 41213683
Alignment:
Q  21 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  41213769 acatcatcataaaaattctccaaatcccgacaaatgggcaaatctccataacataaataaatccagaataaacaatctagaataatc 41213683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 5770302 - 5770220
Alignment:
Q  25 catcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    |||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  5770302 catcataaaaattctccaaatcccgacaaatgggtaaatctccacaacataaataaatccaggataaacaatctagaataatc 5770220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 33383989 - 33384071
Alignment:
Q  25 catcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    |||||||||||||||| ||||  ||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||    
T  33383989 catcataaaaattctccaaattccgacaaatgggcaaatctccgaaacataaataaatccagaataaacaatctagaataatc 33384071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 107
Target Start/End: Original strand, 40555439 - 40555524
Alignment:
Q  21 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    |||||||||||||| ||||  ||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  40555439 acatcatcataaaa-ttcttcaaatcccgacaaatgggcaaatctccacaacataaataaatccaaaataaacaatctagaataatc 40555524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 21 - 107
Target Start/End: Original strand, 21041856 - 21041941
Alignment:
Q  21 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    ||||||||||| |||||||| ||||| ||||||||||| ||||||||||||||||||| || ||||||||||| |||||||||||||    
T  21041856 acatcatcatataaattctccaaatcccgacaaatgggtaaatctccacaacataaat-aagtcagaataaacgatctagaataatc 21041941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 40438437 - 40438355
Alignment:
Q  25 catcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    |||||||| ||||||  ||||| |||||||||||| ||||||| |||||||||||||  ||||||||||||||||||||||||    
T  40438437 catcataacaattcttcaaatcccgacaaatgggctaatctccgcaacataaataaaaccagaataaacaatctagaataatc 40438355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 5472502 - 5472417
Alignment:
Q  21 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    ||||||||||| |||||||| ||||| ||||||||||| ||||||||| ||||||||||||| || || | |||||||||| |||||    
T  5472502 acatcatcatataaattctccaaatcccgacaaatgggtaaatctcca-aacataaataaatccaaaacagacaatctagagtaatc 5472417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 50002047 - 50001972
Alignment:
Q  29 ataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaata 104  Q
    |||||||||||| ||||| |||||| |||| |||||||||  |||||||||||| || || ||| |||||||||||    
T  50002047 ataaaaattctccaaatcccgacaagtgggtaaatctccagcacataaataaatccacaacaaataatctagaata 50001972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 1e-31; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 22499410 - 22499329
Alignment:
Q  26 atcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22499410 atcataaaaattctccaaatcccgacaaatgggcaaatctccacaacataaataaatccagaataaacaatctagaataatc 22499329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 21 - 107
Target Start/End: Original strand, 17264560 - 17264646
Alignment:
Q  21 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    ||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  17264560 acatcatcatataaattctccaaatcccgacaaatgggcaaatctccacaacataaataaatccagaataatcaatctagaataatc 17264646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 23118947 - 23118865
Alignment:
Q  25 catcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    ||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23118947 catcataaaaattatccaaatcccgacaaatgggcaaatctccacaacataaataaatccagaataaacaatctagaataatc 23118865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 18043262 - 18043176
Alignment:
Q  21 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    ||||||||||||| |||||| ||||| ||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  18043262 acatcatcataaagattctccaaatcccgacaaatgagcaaatctccacaacataaataaatccagaacaaacaatctagaataatc 18043176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 107
Target Start/End: Original strand, 33170315 - 33170400
Alignment:
Q  21 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    |||||||||||||| ||||| ||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33170315 acatcatcataaaa-ttctccaaatcccgacaaatggacaaatctccacaacataaataaatccagaataaacaatctagaataatc 33170400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 107
Target Start/End: Original strand, 23216718 - 23216804
Alignment:
Q  21 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    |||||||||||||||||||| |  || ||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||    
T  23216718 acatcatcataaaaattctccatttcccgacaaatgggcaaatctatacaacataaataaatccagaataaacaatctagaataatc 23216804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 7468366 - 7468448
Alignment:
Q  25 catcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    |||||||||| ||||| ||||| ||||||||||||||||||||||||  ||||||||| || |||||||||||||||||||||    
T  7468366 catcataaaagttctccaaatcccgacaaatgggcaaatctccacaatgtaaataaatccaaaataaacaatctagaataatc 7468448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 20707855 - 20707937
Alignment:
Q  25 catcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    |||||||||||||||  ||||| ||||||||||| | ||||||||||||||||||||| ||  ||||||||||||||||||||    
T  20707855 catcataaaaattcttcaaatcccgacaaatgggtagatctccacaacataaataaatccaagataaacaatctagaataatc 20707937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 45561816 - 45561730
Alignment:
Q  21 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    ||||||||||| |||||||| ||||| |||||||| |||||| ||||||||||||||||||| || | |||||||| ||||||||||    
T  45561816 acatcatcatataaattctccaaatcccgacaaattggcaaacctccacaacataaataaatccacagtaaacaatttagaataatc 45561730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 24554685 - 24554599
Alignment:
Q  21 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    ||||||||||| ||||||||| |||  |||||| |||| |||||||||||||||||||||||  | ||| |||||||||||||||||    
T  24554685 acatcatcatataaattctctgaattccgacaattgggtaaatctccacaacataaataaatctataattaacaatctagaataatc 24554599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 17499921 - 17500004
Alignment:
Q  21 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataa 105  Q
    ||||||||||| ||||||||  |||| | ||||||||| ||||||||||||| ||||| || |||||||||| ||||||||||||    
T  17499921 acatcatcatataaattctccgaatcccaacaaatgggtaaatctccacaacgtaaat-aagtcagaataaataatctagaataa 17500004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 25607962 - 25608036
Alignment:
Q  21 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaa 95  Q
    |||||||||||  ||||||| ||||| |||||| ||||||||||| ||||||||||| || | ||||||||||||    
T  25607962 acatcatcatatcaattctccaaatcccgacaattgggcaaatcttcacaacataaacaagtccagaataaacaa 25608036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 6e-30; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 6092519 - 6092601
Alignment:
Q  25 catcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    |||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  6092519 catcataaaaattctccaaatcccgacaaatgggcaaatctccgcaacataaataaatccagaataaacaatctagaataatc 6092601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 25132286 - 25132368
Alignment:
Q  25 catcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    |||||||||||||||| ||||| || ||||||||||||||||||||| |||||||||| || |||||||||||||||||||||    
T  25132286 catcataaaaattctccaaatcccgtcaaatgggcaaatctccacaatataaataaatccaaaataaacaatctagaataatc 25132368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 107
Target Start/End: Original strand, 24272112 - 24272198
Alignment:
Q  21 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    |||||||||||||||||||| ||||| ||||||||||| ||||||| | ||||||||||||| || ||||||| ||||||| |||||    
T  24272112 acatcatcataaaaattctccaaatcccgacaaatgggtaaatctctaaaacataaataaatccaaaataaacgatctagagtaatc 24272198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 30995090 - 30995012
Alignment:
Q  21 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaa 102  Q
    |||||| | ||||||||||||||||| |||||| |||| ||||||||   |||||||||||| || ||| ||||||||||||    
T  30995090 acatcaacctaaaaattctctaaatcccgacaattgggaaaatctcc---acataaataaatccaaaatgaacaatctagaa 30995012  T

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Target: scaffold0004 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 84491 - 84573
Alignment:
Q  25 catcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    |||||||||| ||||| ||||| ||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||    
T  84491 catcataaaagttctccaaatcccgacaaatgggcaaatctccacaatgtaaataaattcaaaataaacaatctagaataatc 84573  T

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Target: scaffold0004; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 21 - 107
Target Start/End: Original strand, 25616 - 25702
Alignment:
Q  21 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    |||||||||||||||||||| |||||  ||||| |||| ||||||||||||| ||||||||| |||||||||||||||| |||||||    
T  25616 acatcatcataaaaattctccaaatcctgacaattgggtaaatctccacaacgtaaataaatccagaataaacaatctaaaataatc 25702  T

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Target: chr5 (Bit Score: 59; Significance: 4e-25; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 23236515 - 23236433
Alignment:
Q  25 catcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    |||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  23236515 catcataaaaattctccaaatcccgacaaatgggtaaatctccacaacataaataaatccaagataaacaatctagaataatc 23236433  T

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Target: chr5; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 5623527 - 5623441
Alignment:
Q  21 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    |||||||||||||||||||| ||||| ||||||||||| ||||||||| ||||||||||||| || ||||||||| ||||| |||||    
T  5623527 acatcatcataaaaattctccaaatcccgacaaatgggtaaatctccaaaacataaataaatccacaataaacaacctagagtaatc 5623441  T

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Target: chr5; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 11963659 - 11963742
Alignment:
Q  21 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaata 104  Q
    ||||||||||| ||| |||| |||||  ||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  11963659 acatcatcatataaaatctccaaatcctgacaaatgggcaaatctccacaatataaataaatctagaataaacaatctagaata 11963742  T

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Target: chr5; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 26561891 - 26561810
Alignment:
Q  26 atcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    ||||||||| ||||| ||||| ||||||||||| || |||||| |||||||||||||||| ||||||||||||||| |||||    
T  26561891 atcataaaatttctccaaatcccgacaaatgggtaattctccaaaacataaataaattcacaataaacaatctagagtaatc 26561810  T

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Target: chr5; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 19871987 - 19872062
Alignment:
Q  32 aaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    ||||||||| ||||| ||||||||| |||||||||||||||||||||||||  | |||||||||| ||||||||||    
T  19871987 aaaattctccaaatcccgacaaatgagcaaatctccacaacataaataaatcaaaaataaacaatatagaataatc 19872062  T

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Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 107
Target Start/End: Original strand, 29912119 - 29912197
Alignment:
Q  29 ataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    |||||||||||| ||||| |||||| ||||||||||||||  |||||||||||| || || | | ||||||||||||||    
T  29912119 ataaaaattctccaaatcccgacaagtgggcaaatctccaacacataaataaatccacaacagataatctagaataatc 29912197  T

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Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 107
Target Start/End: Complemental strand, 3420914 - 3420855
Alignment:
Q  48 cgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    ||||||||| | ||||||||| ||||||||||||| || ||||||||||||||| |||||    
T  3420914 cgacaaatgagaaaatctccaaaacataaataaatccacaataaacaatctagagtaatc 3420855  T

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Target: scaffold0442 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 2077 - 1992
Alignment:
Q  21 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    |||||||||||||||||||| || || ||||||||||| |||||||||||  |||||||||| || |||||||||||||||||||||    
T  2077 acatcatcataaaaattctccaa-tcccgacaaatgggtaaatctccacagtataaataaatccaaaataaacaatctagaataatc 1992  T

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Target: scaffold0442; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 14208 - 14159
Alignment:
Q  21 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaa 71  Q
    |||||||||||||||||||| || || ||||||||||| ||||||||||||    
T  14208 acatcatcataaaaattctccaa-tcccgacaaatgggtaaatctccacaa 14159  T

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Target: scaffold0003 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 99215 - 99298
Alignment:
Q  25 catcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaata-aattcagaataaacaatctagaataatc 107  Q
    |||||||||||||||||||||| |||||| |||| ||||||||| |||||||||| ||| || ||||||  ||||||| |||||    
T  99215 catcataaaaattctctaaatcccgacaattgggtaaatctccataacataaatataatccaaaataaatgatctagagtaatc 99298  T

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Target: scaffold0138 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 107
Target Start/End: Original strand, 18694 - 18779
Alignment:
Q  21 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    |||||||||||||||||||| ||||| ||||||||||| ||||||||| | ||| ||||| | || || ||| ||||||||||||||    
T  18694 acatcatcataaaaattctccaaatcccgacaaatgggtaaatctccaaagcat-aataagtccacaacaaataatctagaataatc 18779  T

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Target: scaffold0327 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 6995 - 6948
Alignment:
Q  21 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctcca 68  Q
    |||||||||||||||||||| ||||| ||||||||||| |||||||||    
T  6995 acatcatcataaaaattctccaaatcccgacaaatgggtaaatctcca 6948  T

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Target: scaffold0013 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 16789 - 16707
Alignment:
Q  26 atcataaaaattctctaaatcacgacaaatgggcaaa-tctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    |||||| ||| |||| | ||| ||||||||||| ||| ||| |||||||||||||||| |||||||| |||||||| ||||||    
T  16789 atcatataaaatctccacatcccgacaaatgggtaaaatcttcacaacataaataaatccagaataatcaatctagtataatc 16707  T

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Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 107
Target Start/End: Original strand, 129964 - 130029
Alignment:
Q  42 aaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctagaataatc 107  Q
    ||||| ||||||||||| ||||||||| ||||||||||| | || |||||| |||||||| |||||    
T  129964 aaatcccgacaaatgggtaaatctccaaaacataaataagtccaaaataaagaatctagagtaatc 130029  T

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Target: scaffold0047 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 101
Target Start/End: Complemental strand, 2226 - 2148
Alignment:
Q  21 acatcatcataaaaattctctaaatcacgacaaatgggcaaatctccacaacataaataaattcagaataaacaatctaga 101  Q
    |||||| ||||||| |||||||| || ||||||||||| |||||||  |||||| ||||||| || |||| | ||||||||    
T  2226 acatcaacataaaagttctctaagtcccgacaaatgggtaaatctc--caacatgaataaatccaaaatagataatctaga 2148  T

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