View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0757_low_3 (Length: 491)

Name: NF0757_low_3
Description: NF0757
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0757_low_3
NF0757_low_3
[»] scaffold0049 (1 HSPs)
scaffold0049 (72-294)||(34569-34791)
[»] chr5 (28 HSPs)
chr5 (296-487)||(24582726-24582917)
chr5 (296-487)||(21935849-21936040)
chr5 (72-294)||(23414060-23414282)
chr5 (296-487)||(23504760-23504951)
chr5 (135-271)||(21108499-21108635)
chr5 (300-413)||(27012604-27012717)
chr5 (122-294)||(11964927-11965099)
chr5 (122-236)||(20455171-20455286)
chr5 (122-287)||(20833134-20833298)
chr5 (122-245)||(14342832-14342956)
chr5 (135-236)||(24226660-24226762)
chr5 (312-491)||(16064433-16064612)
chr5 (185-294)||(23235585-23235694)
chr5 (176-291)||(21615923-21616036)
chr5 (176-258)||(23492956-23493037)
chr5 (131-236)||(33627580-33627685)
chr5 (176-289)||(37982348-37982460)
chr5 (176-291)||(431346-431459)
chr5 (196-287)||(28900999-28901090)
chr5 (196-287)||(28937394-28937485)
chr5 (176-294)||(16836442-16836559)
chr5 (176-244)||(19872805-19872874)
chr5 (438-487)||(23507342-23507391)
chr5 (198-284)||(26560935-26561020)
chr5 (179-291)||(19861137-19861247)
chr5 (179-233)||(23985523-23985578)
chr5 (198-284)||(5622576-5622661)
chr5 (177-229)||(19498697-19498748)
[»] chr3 (49 HSPs)
chr3 (296-487)||(8273117-8273308)
chr3 (296-487)||(30148588-30148779)
chr3 (296-487)||(30139037-30139228)
chr3 (299-487)||(6711131-6711318)
chr3 (296-487)||(6151571-6151762)
chr3 (296-487)||(15611334-15611525)
chr3 (296-487)||(18751174-18751365)
chr3 (300-487)||(25767553-25767740)
chr3 (296-487)||(16258375-16258565)
chr3 (296-460)||(13966089-13966253)
chr3 (296-437)||(16741471-16741612)
chr3 (313-487)||(55514450-55514624)
chr3 (339-487)||(18915000-18915148)
chr3 (135-272)||(8603611-8603748)
chr3 (176-294)||(14181132-14181249)
chr3 (296-380)||(17194325-17194409)
chr3 (122-293)||(11401552-11401723)
chr3 (176-291)||(33369993-33370108)
chr3 (122-236)||(5229188-5229303)
chr3 (176-291)||(34558806-34558919)
chr3 (135-290)||(41660494-41660648)
chr3 (158-261)||(14969840-14969942)
chr3 (131-233)||(43428727-43428831)
chr3 (176-291)||(48420583-48420697)
chr3 (176-261)||(38376862-38376947)
chr3 (131-236)||(25105151-25105255)
chr3 (176-274)||(39654818-39654915)
chr3 (198-274)||(17319728-17319803)
chr3 (131-233)||(18968991-18969095)
chr3 (177-291)||(54652848-54652961)
chr3 (196-292)||(13327691-13327787)
chr3 (178-291)||(17203596-17203707)
chr3 (179-271)||(54039689-54039782)
chr3 (176-258)||(12489881-12489959)
chr3 (188-251)||(9591923-9591986)
chr3 (135-261)||(12951918-12952041)
chr3 (176-294)||(31413435-31413553)
chr3 (214-291)||(19945567-19945644)
chr3 (214-274)||(7852855-7852915)
chr3 (139-210)||(17759543-17759615)
chr3 (139-210)||(19060863-19060935)
chr3 (177-279)||(11516631-11516733)
chr3 (214-257)||(14522463-14522506)
chr3 (176-291)||(15516651-15516765)
chr3 (179-236)||(17937157-17937215)
chr3 (198-284)||(21167863-21167948)
chr3 (300-345)||(10384906-10384951)
chr3 (200-292)||(14079522-14079612)
chr3 (135-235)||(17957531-17957629)
[»] scaffold0876 (2 HSPs)
scaffold0876 (296-487)||(1428-1619)
scaffold0876 (306-487)||(4187-4358)
[»] scaffold0692 (1 HSPs)
scaffold0692 (296-487)||(2357-2548)
[»] scaffold0225 (1 HSPs)
scaffold0225 (296-487)||(25027-25218)
[»] scaffold0124 (1 HSPs)
scaffold0124 (296-487)||(6290-6481)
[»] scaffold0077 (2 HSPs)
scaffold0077 (296-491)||(26744-26939)
scaffold0077 (296-487)||(25437-25618)
[»] chr6 (38 HSPs)
chr6 (296-487)||(16380997-16381188)
chr6 (296-487)||(1647438-1647629)
chr6 (296-487)||(16099475-16099666)
chr6 (296-487)||(16648593-16648784)
chr6 (296-487)||(23997714-23997905)
chr6 (296-487)||(18836532-18836723)
chr6 (296-487)||(16234494-16234685)
chr6 (296-487)||(19986040-19986231)
chr6 (296-491)||(14129935-14130130)
chr6 (296-487)||(21928671-21928862)
chr6 (72-294)||(34965747-34965971)
chr6 (345-487)||(18577724-18577866)
chr6 (296-487)||(23026349-23026531)
chr6 (296-373)||(35274824-35274901)
chr6 (122-270)||(17084398-17084547)
chr6 (135-292)||(29161467-29161623)
chr6 (131-294)||(22463242-22463406)
chr6 (177-294)||(19853122-19853238)
chr6 (135-291)||(22847013-22847168)
chr6 (122-261)||(23220678-23220816)
chr6 (176-274)||(22594471-22594569)
chr6 (160-272)||(16375278-16375390)
chr6 (135-294)||(11373879-11374038)
chr6 (160-233)||(31162090-31162164)
chr6 (176-272)||(26505779-26505874)
chr6 (122-194)||(16135260-16135332)
chr6 (221-292)||(25650100-25650171)
chr6 (214-291)||(18582229-18582306)
chr6 (178-291)||(22363341-22363452)
chr6 (176-292)||(35137133-35137246)
chr6 (167-272)||(17857573-17857678)
chr6 (213-270)||(4172749-4172805)
chr6 (206-289)||(18382831-18382913)
chr6 (72-115)||(19853036-19853079)
chr6 (222-293)||(26523339-26523410)
chr6 (198-284)||(32351047-32351132)
chr6 (213-270)||(4228358-4228414)
chr6 (176-292)||(33323685-33323798)
[»] chr1 (25 HSPs)
chr1 (296-487)||(20829943-20830134)
chr1 (296-487)||(20915218-20915409)
chr1 (296-487)||(22134108-22134299)
chr1 (296-487)||(41216408-41216599)
chr1 (72-294)||(5769321-5769542)
chr1 (135-291)||(8539092-8539247)
chr1 (135-291)||(8604331-8604486)
chr1 (135-274)||(33396290-33396430)
chr1 (176-291)||(21194078-21194193)
chr1 (131-292)||(40437406-40437567)
chr1 (176-291)||(27673753-27673867)
chr1 (181-294)||(20193043-20193156)
chr1 (196-271)||(77102-77176)
chr1 (161-292)||(52400233-52400365)
chr1 (196-287)||(16655446-16655537)
chr1 (196-290)||(5471535-5471629)
chr1 (176-287)||(17607867-17607976)
chr1 (131-232)||(46144671-46144774)
chr1 (135-291)||(37235113-37235266)
chr1 (138-271)||(20821981-20822114)
chr1 (142-233)||(49998509-49998602)
chr1 (190-289)||(22144528-22144626)
chr1 (176-274)||(20956137-20956234)
chr1 (176-261)||(13377944-13378028)
chr1 (312-349)||(52987405-52987442)
[»] scaffold0162 (1 HSPs)
scaffold0162 (296-487)||(14541-14732)
[»] scaffold0120 (1 HSPs)
scaffold0120 (300-487)||(23813-24000)
[»] scaffold0076 (1 HSPs)
scaffold0076 (296-487)||(41891-42082)
[»] chr8 (38 HSPs)
chr8 (296-487)||(23155962-23156153)
chr8 (296-487)||(21849259-21849450)
chr8 (296-484)||(16876020-16876208)
chr8 (296-487)||(22435971-22436162)
chr8 (308-487)||(21195461-21195640)
chr8 (72-294)||(22498406-22498629)
chr8 (72-294)||(33171098-33171319)
chr8 (103-294)||(18042649-18042840)
chr8 (296-487)||(22316859-22317040)
chr8 (296-417)||(23901855-23901976)
chr8 (122-274)||(45560255-45560407)
chr8 (122-274)||(25756966-25757118)
chr8 (122-274)||(25294946-25295098)
chr8 (122-271)||(11543491-11543639)
chr8 (296-487)||(20651277-20651446)
chr8 (132-294)||(24238581-24238743)
chr8 (122-239)||(22312646-22312763)
chr8 (135-291)||(37654776-37654931)
chr8 (131-292)||(7469149-7469311)
chr8 (176-292)||(17500959-17501074)
chr8 (133-272)||(19332656-19332795)
chr8 (176-294)||(22886797-22886915)
chr8 (140-233)||(3845223-3845317)
chr8 (181-289)||(16001039-16001147)
chr8 (176-292)||(33612200-33612315)
chr8 (142-292)||(38636798-38636949)
chr8 (177-291)||(26010374-26010485)
chr8 (176-288)||(15932262-15932372)
chr8 (184-291)||(23836134-23836239)
chr8 (176-274)||(23148810-23148906)
chr8 (193-272)||(20177023-20177101)
chr8 (193-272)||(20221750-20221828)
chr8 (312-447)||(24631628-24631763)
chr8 (131-209)||(25609032-25609111)
chr8 (198-245)||(25609190-25609237)
chr8 (179-289)||(23227158-23227267)
chr8 (72-127)||(23116092-23116147)
chr8 (159-272)||(18119081-18119194)
[»] chr7 (47 HSPs)
chr7 (296-487)||(7825491-7825682)
chr7 (72-294)||(13617660-13617882)
chr7 (296-487)||(15365530-15365721)
chr7 (296-487)||(27106262-27106453)
chr7 (296-487)||(27171872-27172063)
chr7 (296-487)||(14937937-14938128)
chr7 (296-487)||(4441519-4441710)
chr7 (296-474)||(13457622-13457800)
chr7 (296-487)||(17925242-17925432)
chr7 (72-294)||(9322171-9322392)
chr7 (298-487)||(21673020-21673209)
chr7 (296-486)||(13354740-13354930)
chr7 (135-271)||(16382538-16382674)
chr7 (309-491)||(23649461-23649643)
chr7 (308-439)||(15717439-15717570)
chr7 (122-239)||(21676029-21676147)
chr7 (311-457)||(17143780-17143926)
chr7 (176-294)||(20584010-20584127)
chr7 (122-294)||(4483705-4483877)
chr7 (122-236)||(28719432-28719547)
chr7 (131-261)||(21539288-21539419)
chr7 (131-272)||(39292823-39292963)
chr7 (122-232)||(8564704-8564815)
chr7 (176-291)||(9610181-9610294)
chr7 (176-291)||(9837753-9837866)
chr7 (143-272)||(15979144-15979273)
chr7 (181-289)||(14276083-14276190)
chr7 (131-291)||(48354236-48354393)
chr7 (176-291)||(9057782-9057895)
chr7 (141-292)||(14939684-14939836)
chr7 (141-292)||(15367277-15367429)
chr7 (176-293)||(18080741-18080857)
chr7 (181-271)||(9643284-9643374)
chr7 (167-272)||(3193227-3193332)
chr7 (176-291)||(10861987-10862101)
chr7 (196-291)||(16921064-16921158)
chr7 (193-272)||(44306262-44306340)
chr7 (202-294)||(13350982-13351073)
chr7 (135-294)||(45148533-45148692)
chr7 (176-274)||(49048952-49049049)
chr7 (122-174)||(46472941-46472993)
chr7 (216-291)||(7285354-7285429)
chr7 (199-258)||(19066545-19066603)
chr7 (159-272)||(12182955-12183068)
chr7 (72-113)||(20584171-20584212)
chr7 (213-261)||(17986027-17986074)
chr7 (131-222)||(31500109-31500201)
[»] chr4 (31 HSPs)
chr4 (296-487)||(14998917-14999108)
chr4 (296-487)||(15291637-15291828)
chr4 (296-487)||(9292437-9292628)
chr4 (72-294)||(24237726-24237948)
chr4 (78-273)||(49070671-49070865)
chr4 (299-487)||(12341344-12341532)
chr4 (106-294)||(47469453-47469640)
chr4 (135-271)||(12134792-12134928)
chr4 (72-274)||(10238584-10238784)
chr4 (177-294)||(50221071-50221188)
chr4 (133-292)||(12733050-12733209)
chr4 (135-290)||(15014411-15014565)
chr4 (132-290)||(16226295-16226452)
chr4 (131-294)||(19558318-19558481)
chr4 (122-236)||(5371773-5371887)
chr4 (160-272)||(17213010-17213122)
chr4 (136-260)||(54364623-54364747)
chr4 (176-294)||(41917873-41917991)
chr4 (176-258)||(34197347-34197428)
chr4 (72-157)||(50223406-50223491)
chr4 (131-291)||(18275711-18275868)
chr4 (122-236)||(17376634-17376749)
chr4 (181-271)||(13593872-13593962)
chr4 (184-291)||(41257493-41257600)
chr4 (196-292)||(7187056-7187151)
chr4 (106-293)||(19082201-19082388)
chr4 (131-245)||(38763677-38763793)
chr4 (196-288)||(12245404-12245495)
chr4 (215-291)||(43282513-43282589)
chr4 (177-292)||(34394101-34394214)
chr4 (184-294)||(40901800-40901911)
[»] scaffold0011 (1 HSPs)
scaffold0011 (296-487)||(181557-181748)
[»] chr2 (32 HSPs)
chr2 (296-487)||(12639252-12639443)
chr2 (296-487)||(24830207-24830398)
chr2 (296-485)||(22760590-22760779)
chr2 (296-487)||(22279338-22279529)
chr2 (300-487)||(24568687-24568874)
chr2 (296-487)||(25129842-25130033)
chr2 (143-292)||(6093831-6093980)
chr2 (122-294)||(18534804-18534976)
chr2 (122-272)||(24561910-24562060)
chr2 (106-233)||(22331679-22331807)
chr2 (177-288)||(24276810-24276920)
chr2 (135-236)||(43641706-43641808)
chr2 (176-291)||(66469-66583)
chr2 (176-274)||(22787184-22787281)
chr2 (135-235)||(19434653-19434754)
chr2 (200-294)||(9635744-9635838)
chr2 (177-291)||(25600866-25600979)
chr2 (152-236)||(45618407-45618492)
chr2 (330-437)||(10038392-10038499)
chr2 (176-291)||(24088508-24088622)
chr2 (198-284)||(25133147-25133232)
chr2 (178-272)||(9782076-9782168)
chr2 (176-271)||(29113238-29113333)
chr2 (176-259)||(19658866-19658947)
chr2 (176-239)||(24840831-24840894)
chr2 (179-233)||(32464911-32464966)
chr2 (221-271)||(20272424-20272474)
chr2 (330-411)||(10098814-10098895)
chr2 (176-269)||(19665582-19665674)
chr2 (176-229)||(19670339-19670391)
chr2 (176-256)||(721387-721466)
chr2 (136-215)||(20272350-20272430)
[»] scaffold0244 (1 HSPs)
scaffold0244 (296-487)||(25259-25450)
[»] scaffold0021 (3 HSPs)
scaffold0021 (296-491)||(31891-32086)
scaffold0021 (300-487)||(6851-7038)
scaffold0021 (296-339)||(72821-72864)
[»] scaffold0088 (1 HSPs)
scaffold0088 (72-294)||(44715-44939)
[»] scaffold0057 (1 HSPs)
scaffold0057 (78-294)||(4788-5004)
[»] scaffold1488 (1 HSPs)
scaffold1488 (296-487)||(1284-1475)
[»] scaffold0387 (1 HSPs)
scaffold0387 (296-487)||(15691-15882)
[»] scaffold0369 (1 HSPs)
scaffold0369 (296-487)||(1095-1286)
[»] scaffold0028 (2 HSPs)
scaffold0028 (296-487)||(105055-105246)
scaffold0028 (176-261)||(78596-78678)
[»] scaffold0008 (2 HSPs)
scaffold0008 (296-487)||(25459-25650)
scaffold0008 (296-486)||(132972-133162)
[»] scaffold0170 (1 HSPs)
scaffold0170 (296-486)||(33718-33908)
[»] scaffold0218 (1 HSPs)
scaffold0218 (296-487)||(2434-2626)
[»] scaffold0266 (1 HSPs)
scaffold0266 (296-487)||(8343-8534)
[»] scaffold0102 (1 HSPs)
scaffold0102 (296-487)||(46895-47086)
[»] scaffold0160 (2 HSPs)
scaffold0160 (300-462)||(2915-3077)
scaffold0160 (300-424)||(8902-9026)
[»] scaffold0335 (1 HSPs)
scaffold0335 (296-487)||(11192-11383)
[»] scaffold0610 (1 HSPs)
scaffold0610 (321-487)||(7410-7576)
[»] scaffold0243 (2 HSPs)
scaffold0243 (304-463)||(1514-1673)
scaffold0243 (184-258)||(3469-3542)
[»] scaffold0023 (1 HSPs)
scaffold0023 (296-491)||(54420-54614)
[»] scaffold0347 (1 HSPs)
scaffold0347 (299-487)||(2623-2811)
[»] scaffold0310 (1 HSPs)
scaffold0310 (294-487)||(13306-13489)
[»] scaffold0092 (1 HSPs)
scaffold0092 (314-426)||(1-113)
[»] scaffold0013 (2 HSPs)
scaffold0013 (122-272)||(8269-8419)
scaffold0013 (176-273)||(34370-34465)
[»] scaffold0302 (2 HSPs)
scaffold0302 (296-487)||(6807-6977)
scaffold0302 (453-487)||(1-35)
[»] scaffold0017 (1 HSPs)
scaffold0017 (122-237)||(11558-11675)
[»] scaffold0090 (3 HSPs)
scaffold0090 (122-236)||(1338-1453)
scaffold0090 (122-236)||(5718-5833)
scaffold0090 (176-272)||(35849-35944)
[»] scaffold0317 (1 HSPs)
scaffold0317 (122-239)||(14922-15040)
[»] scaffold0079 (1 HSPs)
scaffold0079 (122-261)||(5174-5313)
[»] scaffold1204 (1 HSPs)
scaffold1204 (135-236)||(1297-1399)
[»] scaffold0561 (1 HSPs)
scaffold0561 (176-294)||(3941-4059)
[»] scaffold0004 (3 HSPs)
scaffold0004 (176-294)||(85330-85448)
scaffold0004 (179-290)||(26482-26595)
scaffold0004 (72-113)||(26394-26435)
[»] scaffold0183 (1 HSPs)
scaffold0183 (122-239)||(9788-9907)
[»] scaffold0153 (1 HSPs)
scaffold0153 (131-293)||(762-924)
[»] scaffold0031 (1 HSPs)
scaffold0031 (176-291)||(98301-98414)
[»] scaffold0025 (1 HSPs)
scaffold0025 (176-291)||(84500-84615)
[»] scaffold0601 (1 HSPs)
scaffold0601 (176-261)||(2156-2240)
[»] scaffold0193 (1 HSPs)
scaffold0193 (196-291)||(3637-3730)
[»] scaffold0151 (1 HSPs)
scaffold0151 (176-291)||(23605-23719)
[»] scaffold0080 (1 HSPs)
scaffold0080 (188-291)||(24742-24845)
[»] scaffold0468 (1 HSPs)
scaffold0468 (122-204)||(12200-12282)
[»] scaffold0103 (1 HSPs)
scaffold0103 (176-258)||(32489-32570)
[»] scaffold0022 (1 HSPs)
scaffold0022 (177-294)||(130809-130925)
[»] scaffold0175 (1 HSPs)
scaffold0175 (176-292)||(6278-6393)
[»] scaffold0009 (3 HSPs)
scaffold0009 (174-284)||(98172-98281)
scaffold0009 (131-288)||(68386-68540)
scaffold0009 (176-261)||(255448-255532)
[»] scaffold0635 (1 HSPs)
scaffold0635 (330-437)||(8571-8678)
[»] scaffold0026 (1 HSPs)
scaffold0026 (176-258)||(91020-91101)
[»] scaffold0357 (1 HSPs)
scaffold0357 (198-274)||(6694-6769)
[»] scaffold0346 (1 HSPs)
scaffold0346 (208-287)||(13809-13888)
[»] scaffold0174 (1 HSPs)
scaffold0174 (134-240)||(21158-21264)
[»] scaffold0051 (1 HSPs)
scaffold0051 (176-258)||(59478-59559)
[»] scaffold0231 (1 HSPs)
scaffold0231 (136-271)||(14006-14142)
[»] scaffold0521 (1 HSPs)
scaffold0521 (202-273)||(7519-7589)
[»] scaffold0125 (1 HSPs)
scaffold0125 (177-236)||(34648-34707)
[»] scaffold0010 (1 HSPs)
scaffold0010 (176-291)||(30034-30147)
[»] scaffold0006 (1 HSPs)
scaffold0006 (176-291)||(198497-198612)
[»] scaffold0207 (1 HSPs)
scaffold0207 (294-335)||(19678-19719)
[»] scaffold0047 (2 HSPs)
scaffold0047 (238-287)||(1244-1293)
scaffold0047 (176-244)||(76006-76075)
[»] scaffold0456 (2 HSPs)
scaffold0456 (176-292)||(12080-12194)
scaffold0456 (176-258)||(13092-13172)
[»] scaffold0507 (1 HSPs)
scaffold0507 (176-291)||(4518-4630)
[»] scaffold1957 (1 HSPs)
scaffold1957 (211-244)||(981-1014)
[»] scaffold0503 (1 HSPs)
scaffold0503 (176-292)||(10516-10630)
[»] scaffold0016 (1 HSPs)
scaffold0016 (179-226)||(167383-167431)


Alignment Details
Target: scaffold0049 (Bit Score: 171; Significance: 1e-91; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 72 - 294
Target Start/End: Complemental strand, 34791 - 34569
Alignment:
Q  72 catcatcacattgtcatcataatttttaataatcatcaacattaattgatatatatactttaatcaacatcaactatataatatagctcaacaactccat 171  Q
    |||||||||||||||||||||||| | ||||||||||||||| ||||||||||| ||||||||||||  | |||||||||||||||||||||||||||||    
T  34791 catcatcacattgtcatcataattatcaataatcatcaacatcaattgatatatgtactttaatcaatttaaactatataatatagctcaacaactccat 34692  T
Q  172 acactttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcata 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  | ||||||| |||||||||    
T  34691 acactttctcacattccaagtaaggagaaaatacaacaccttatgataaacttcatattcaacacctaacaattcattcgtatatcttcatttaatcata 34592  T
Q  272 taacgctaatcacgaaagattta 294  Q
    ||| |||||||||||||||||||    
T  34591 taaagctaatcacgaaagattta 34569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 160; Significance: 5e-85; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 296 - 487
Target Start/End: Original strand, 24582726 - 24582917
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||     
T  24582726 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggcaaaatcaacactggagctgaagtcaacctcttc 24582825  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  24582826 ttcaactcttggaaactcttctcacacttggcatcccaaacataagcttgtcccttccgagtcaactgcgtcaatggcaacgccaacttaga 24582917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 296 - 487
Target Start/End: Complemental strand, 21936040 - 21935849
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||| |||||     
T  21936040 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggcaaaatcaacaccggagctgaagtcaacctcttc 21935941  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||  ||||| ||||||||||||||||||| ||||||||||||||||||    
T  21935940 ttcaactcttggaaactcttctcacacttggcatcccaaacataagcctgtcctttccgagtcaactgcgtcaatggcaacgccaacttaga 21935849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 72 - 294
Target Start/End: Original strand, 23414060 - 23414282
Alignment:
Q  72 catcatcacattgtcatcataatttttaataatcatcaacattaattgatatatatactttaatcaacatcaactatataatatagctcaacaactccat 171  Q
    |||| ||||||||||||||||||| | ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  23414060 catcttcacattgtcatcataattatcaataatcatcaacatcaattgatatatatacattaatcaacatcaactatataatatagctcaacaactccat 23414159  T
Q  172 acactttctcacattccaagt-aaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcat 270  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||| | ||||| | |||||||     
T  23414160 acactttctcacattccaagtaaaggagaaaatacaacaccttataataaacatcatattcagcacctaacaa-tcattcaaatatcttaatttaatcaa 23414258  T
Q  271 ataacgctaatcacgaaagattta 294  Q
    |||| | || ||||||||||||||    
T  23414259 ataaagttattcacgaaagattta 23414282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 296 - 487
Target Start/End: Original strand, 23504760 - 23504951
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||     
T  23504760 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggcaaaatcaacactggagctgaagtcaacctcttc 23504859  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||||||||||||||| ||||||  ||||||||||||||| ||| || ||||||||||||||||||| ||||||||||||||||||    
T  23504860 ttcaactcttggaaactcttctcacacttgtcatcccaaacataagcttgccctttccgagtcaactgcgtcaatggcaacgccaacttaga 23504951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 135 - 271
Target Start/End: Original strand, 21108499 - 21108635
Alignment:
Q  135 tcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaa-ggagaaaatacaacaccttatgataaacatcatattcaa 233  Q
    |||||||||||||||| |||||| |||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  21108499 tcaacatcaactatatcatatagttcaacaactccatatactttctcacaatccaagtaaaggagaaaatacaacaccttatggtaaacatcatattcaa 21108598  T
Q  234 cacctaacaattcattcacacatcttcaattaatcata 271  Q
    |||||||||| ||||||||| |||||||  ||||||||    
T  21108599 cacctaacaa-tcattcacatatcttcatataatcata 21108635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 300 - 413
Target Start/End: Original strand, 27012604 - 27012717
Alignment:
Q  300 acaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctctttttca 399  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||  ||||||||||||| ||||| ||||    
T  27012604 acaccatcaagacccatcttagaagcatcacaatacacaacaaacgattcattcggattcggcaaaatcaacaccggagctgaagtcaacctcttcttca 27012703  T
Q  400 actcttggaaactc 413  Q
    ||||||||||||||    
T  27012704 actcttggaaactc 27012717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 122 - 294
Target Start/End: Original strand, 11964927 - 11965099
Alignment:
Q  122 atatatactttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaa-ggagaaaatacaacaccttatgataa 220  Q
    |||||| | |||||||||||||||||||| || ||| ||||||||| |||||| ||||||||| | ||||||| |||||||||||||||| |||||||||    
T  11964927 atatatgcattaatcaacatcaactatattatttagttcaacaacttcatacaatttctcacaattcaagtaaaggagaaaatacaacacattatgataa 11965026  T
Q  221 acatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaagattta 294  Q
    |||||||||||||||| |   ||  |||||||| |||||||  ||||||||||| |||| ||||||||||||||    
T  11965027 acatcatattcaacacat-gtaaagcattcacatatcttcatataatcatataaagctattcacgaaagattta 11965099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 122 - 236
Target Start/End: Complemental strand, 20455286 - 20455171
Alignment:
Q  122 atatatactttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagt-aaggagaaaatacaacaccttatgataa 220  Q
    |||||| | |||||||||||||||||||| |||||| ||||||||||||| || ||||||||| | ||||| |||||||||||||||||| |||||||||    
T  20455286 atatatgcattaatcaacatcaactatatcatatagttcaacaactccattcagtttctcacaattcaagtaaaggagaaaatacaacacattatgataa 20455187  T
Q  221 acatcatattcaacac 236  Q
    ||||||||||||||||    
T  20455186 acatcatattcaacac 20455171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 122 - 287
Target Start/End: Complemental strand, 20833298 - 20833134
Alignment:
Q  122 atatatactttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaaggagaaaatacaacaccttatgataaa 221  Q
    |||||| | ||| |||||||||||||||| |||||| ||||||||||||||   ||||||||| | ||||||| ||||||||||| || |||||||||||    
T  20833298 atatatgcattattcaacatcaactatatcatatagttcaacaactccatattatttctcacaatacaagtaaagagaaaatacatcatcttatgataaa 20833199  T
Q  222 catcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaa 287  Q
     ||||||| |||||  |||||||||| ||||||||||||| |||  || |||| |||| |||||||    
T  20833198 tatcatatccaacatttaacaattca-tcacacatcttcatttagacacataaggctagtcacgaa 20833134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 122 - 245
Target Start/End: Complemental strand, 14342956 - 14342832
Alignment:
Q  122 atatatactttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaa-ggagaaaatacaacaccttatgataa 220  Q
    |||||| | ||| |||||||||||||||| |||| | |||||||||||||||  ||||||||| | ||| ||| |||||||||||||||| |||||||||    
T  14342956 atatatgcattattcaacatcaactatatcatattgttcaacaactccataccatttctcacaattcaattaatggagaaaatacaacacattatgataa 14342857  T
Q  221 acatcatattcaacacctaacaatt 245  Q
    |||||||||||||||| ||||||||    
T  14342856 acatcatattcaacacttaacaatt 14342832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 135 - 236
Target Start/End: Complemental strand, 24226762 - 24226660
Alignment:
Q  135 tcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagt-aaggagaaaatacaacaccttatgataaacatcatattcaa 233  Q
    ||||||||||||| || |||||| |||||||||||||||| ||||||||| | ||||| ||||||||| || ||||| ||||||||||||||||||||||    
T  24226762 tcaacatcaactacatcatatagttcaacaactccatacaatttctcacaattcaagtaaaggagaaagtaaaacacattatgataaacatcatattcaa 24226663  T
Q  234 cac 236  Q
    |||    
T  24226662 cac 24226660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 312 - 491
Target Start/End: Complemental strand, 16064612 - 16064433
Alignment:
Q  312 cccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctctttttcaactcttggaaac 411  Q
    ||||||||||| |||||||||||||||| ||||||| | || | ||||| ||||||||| ||| | ||  |||||||  | || |||||||  || || |    
T  16064612 cccatcttagacgcatcacaatacacaataaacgatcctttggtattcgaaaaaatcaaaactagcgcaaaagtcaacattttcttcaacttctgaaagc 16064513  T
Q  412 tcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttagaaaat 491  Q
    ||| || ||||||||||||||||||| |||||| |||||| |||||||| |||||||  || || ||||| |||||||||    
T  16064512 tctcctcacacttagcatcccaaacaaaagtttttcccttacgagtcaattgcgtcaaaggaaaagccaagttagaaaat 16064433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 185 - 294
Target Start/End: Complemental strand, 23235694 - 23235585
Alignment:
Q  185 ttccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgctaatcac 284  Q
    |||||||||| ||  ||||||||||||||||||| |||||||||| ||||| ||||||| ||||||||| | ||| | ||||||||| || |||| ||||    
T  23235694 ttccaagtaaagatgaaatacaacaccttatgatgaacatcatatccaacatctaacaagtcattcacataactttatttaatcatacaaagctattcac 23235595  T
Q  285 gaaagattta 294  Q
    ||||||||||    
T  23235594 gaaagattta 23235585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 176 - 291
Target Start/End: Original strand, 21615923 - 21616036
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataac 275  Q
    ||||||| |||||||||||| |||| |||||||| ||||||||||| ||||||| |||||   ||||| ||||||||||||||||| ||| ||||||||     
T  21615923 tttctcatattccaagtaag-agaacatacaacatcttatgataaatatcatat-caacatacaacaagtcattcacacatcttcatttattcatataag 21616020  T
Q  276 gctaatcacgaaagat 291  Q
    |||| |||||||||||    
T  21616021 gctagtcacgaaagat 21616036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 176 - 258
Target Start/End: Original strand, 23492956 - 23493037
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatct 258  Q
    ||||||| |||||||||||| |||| |||||||| ||||||||||| ||||||| |||||| |||||||||||||||||||||    
T  23492956 tttctcatattccaagtaag-agaacatacaacatcttatgataaatatcatatccaacacataacaattcattcacacatct 23493037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 33627685 - 33627580
Alignment:
Q  131 ttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagt-aaggagaaaatacaacaccttatgataaacatcatat 229  Q
    ||||||||| |||||||||| |||||| |||||||||||||||| ||| ||| | | ||||| ||||||||||||||||||  ||||||||||| |||||    
T  33627685 ttaatcaacttcaactatatcatatagttcaacaactccatacaatttttcataatacaagtaaaggagaaaatacaacacactatgataaaca-catat 33627587  T
Q  230 tcaacac 236  Q
    |||||||    
T  33627586 tcaacac 33627580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 176 - 289
Target Start/End: Original strand, 37982348 - 37982460
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataac 275  Q
    ||||||| |||||||||||| |||| |||||||| ||||||||||| ||||||| | |||  ||||||||||||||||| |||||  ||| ||||||||     
T  37982348 tttctcatattccaagtaag-agaacatacaacatcttatgataaatatcatatcctacatataacaattcattcacacctcttcctttagtcatataag 37982446  T
Q  276 gctaatcacgaaag 289  Q
    |||| |||||||||    
T  37982447 gctagtcacgaaag 37982460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 176 - 291
Target Start/End: Original strand, 431346 - 431459
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataac 275  Q
    |||||||||||||||||||  |||| |||||||| || |||||||| ||||||| |||||| |||||||||||||||||||||  | ||| |||||| |     
T  431346 tttctcacattccaagtaaa-agaacatacaacatctaatgataaatatcatatccaacacataacaattcattcacacatctctacttagtcatat-ag 431443  T
Q  276 gctaatcacgaaagat 291  Q
    |||| |||||||||||    
T  431444 gctagtcacgaaagat 431459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 196 - 287
Target Start/End: Original strand, 28900999 - 28901090
Alignment:
Q  196 gagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaa 287  Q
    ||||| |||||||| ||||||||||| ||||||  |||||| |||||||||||||||||||||||| ||| ||||| || |||| |||||||    
T  28900999 gagaacatacaacatcttatgataaatatcatagccaacacataacaattcattcacacatcttcatttagtcatacaaggctagtcacgaa 28901090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 196 - 287
Target Start/End: Original strand, 28937394 - 28937485
Alignment:
Q  196 gagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaa 287  Q
    ||||| |||||||| ||||||||||| ||||||  |||||| |||||||||||||||||||||||| ||| ||||| || |||| |||||||    
T  28937394 gagaacatacaacatcttatgataaatatcatagccaacacataacaattcattcacacatcttcatttagtcatacaaggctagtcacgaa 28937485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 176 - 294
Target Start/End: Complemental strand, 16836559 - 16836442
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataac 275  Q
    |||| |||||||||||||| ||| ||||||||||||||||||| |||||||||| |||  |||||||| ||||| ||| ||||| | ||||||||| ||     
T  16836559 tttcccacattccaagtaaagaggaaatacaacaccttatgatgaacatcatatccaatgcctaacaa-tcattaacatatctttatttaatcatacaaa 16836461  T
Q  276 gctaatcacgaaagattta 294  Q
    |||| |||| |||| ||||    
T  16836460 gctattcacaaaaggttta 16836442  T

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Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 176 - 244
Target Start/End: Original strand, 19872805 - 19872874
Alignment:
Q  176 tttctcacattccaagtaa-ggagaaaatacaacaccttatgataaacatcatattcaacacctaacaat 244  Q
    |||| |||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||| |||||||    
T  19872805 tttcccacattccaagtaaaggagaaaatatcacaccttatgataaacatcatattccacacttaacaat 19872874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 438 - 487
Target Start/End: Original strand, 23507342 - 23507391
Alignment:
Q  438 taagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||| |||||| ||||||||||||||||||| ||||||||||||||||||    
T  23507342 taagcttgtcctttccgagtcaactgcgtcaatggcaacgccaacttaga 23507391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 284
Target Start/End: Complemental strand, 26561020 - 26560935
Alignment:
Q  198 gaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgctaatcac 284  Q
    |||||||||||||||| |||||||| ||| ||||||||||| || ||| | ||||| ||||||| | ||||||||||  ||||||||    
T  26561020 gaaaatacaacaccttgtgataaacctcacattcaacacct-accatttactcacatatcttcattcaatcatataaaactaatcac 26560935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 291
Target Start/End: Original strand, 19861137 - 19861247
Alignment:
Q  179 ctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgct 278  Q
    |||| ||||||||| || |||| |||||||| ||||||||||| |||||||  | |  | ||||| |||||||| |||||||| ||| |||||||| |||    
T  19861137 ctcatattccaagttag-agaacatacaacatcttatgataaatatcatatcaatctac-aacaagtcattcacgcatcttcatttagtcatataaggct 19861234  T
Q  279 aatcacgaaagat 291  Q
    | |||||||||||    
T  19861235 agtcacgaaagat 19861247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 179 - 233
Target Start/End: Complemental strand, 23985578 - 23985523
Alignment:
Q  179 ctcacattccaagtaaggag-aaaatacaacaccttatgataaacatcatattcaa 233  Q
    |||||||||||||||| ||| |||||||| ||||||| ||||||||||| ||||||    
T  23985578 ctcacattccaagtaaagaggaaaatacatcaccttaagataaacatcacattcaa 23985523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 284
Target Start/End: Complemental strand, 5622661 - 5622576
Alignment:
Q  198 gaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgctaatcac 284  Q
    |||||||||||| ||| |||||||| ||| ||||||||||| || ||| | ||||| ||||||| | ||||||||||  ||||||||    
T  5622661 gaaaatacaacatcttgtgataaacctcacattcaacacct-accatttactcacatatcttcattcaatcatataaaactaatcac 5622576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 19498697 - 19498748
Alignment:
Q  177 ttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatat 229  Q
    |||||| |||||||||||| |||| |||||||| || ||||||||||||||||    
T  19498697 ttctcatattccaagtaag-agaacatacaacatctcatgataaacatcatat 19498748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 160; Significance: 5e-85; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 296 - 487
Target Start/End: Complemental strand, 8273308 - 8273117
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||     
T  8273308 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggcaaaatcaacactggagctgaagtcaacctcttc 8273209  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  8273208 ttcaactcttggaaactcttctcacacttggcatcccaaacataagcttgtcccttccgagtcaactgcgtcaatggcaacgccaacttaga 8273117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 296 - 487
Target Start/End: Original strand, 30148588 - 30148779
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||| |||||     
T  30148588 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggcaaaatcaacaccggagctgaagtcaacctcttc 30148687  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||    
T  30148688 ttcaactcttggaaactcttctcacacttggcatcccaaacataagcttgtcctttccgagtcaactgcgtcaatggcaacgccaacttaga 30148779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 296 - 487
Target Start/End: Original strand, 30139037 - 30139228
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||| |||||     
T  30139037 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggcaaaatcaacaccggagctgaagtcaacctcttc 30139136  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||  ||||| ||||||||||||||||||| ||||||||||||||||||    
T  30139137 ttcaactcttggaaactcttctcacacttggcatcccaaacataagcctgtcctttccgagtcaactgcgtcaatggcaacgccaacttaga 30139228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 299 - 487
Target Start/End: Complemental strand, 6711318 - 6711131
Alignment:
Q  299 cacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctctttttc 398  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||| ||||||||||||| ||||| |||    
T  6711318 cacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattctttcggattcggtaaaatcaatactagagctgaagtcaacctcttcttc 6711219  T
Q  399 aactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    ||||||||||||||||||| |||| |||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||    
T  6711218 aactcttggaaactcttctcacac-tagcatcccaaacataagcttgtcctttccgagtcaactgcgtcaatggcaacgccaacttaga 6711131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 296 - 487
Target Start/End: Complemental strand, 6151762 - 6151571
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| | |||     
T  6151762 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggcaaaatcaacactggagctgaagtcaaccccttc 6151663  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||||||||||||||| ||| ||||||||| ||||||||| |||||| || |||||||||||||| | ||||||||||||||||||    
T  6151662 ttcaactcttggaaactcttctcacatttagcatccaaaacataagcttgtccttttcgagtcaactgcgtgaatggcaacgccaacttaga 6151571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 296 - 487
Target Start/End: Original strand, 15611334 - 15611525
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||     
T  15611334 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggcaaaatcaacactggagctgaagtcaacctcttc 15611433  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    ||||||||||||||||||| || |||||| |||||||||||||||| |||||| ||| ||| ||||||| ||| ||||||||||||||||||    
T  15611434 ttcaactcttggaaactctactcacacttggcatcccaaacataagcttgtcctttctgagccaactgcttcaatggcaacgccaacttaga 15611525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 296 - 487
Target Start/End: Original strand, 18751174 - 18751365
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||| ||| ||||||||| |||||     
T  18751174 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattcattcgggttcggcaaaatcaacactggagttgaagtcaacctcttc 18751273  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||| |||||| ||||||||||| ||||||| ||||||||||||||||||    
T  18751274 ttcaactcttggaaactcttctcacacttaacatcccaaacataagcttgtcctttccgagtcaattgcgtcaatggcaacgccaacttaga 18751365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 300 - 487
Target Start/End: Original strand, 25767553 - 25767740
Alignment:
Q  300 acaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctctttttca 399  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||| |||||||| ||||| ||||    
T  25767553 acaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggatttggcaaaatcaacactggagccgaagtcaacctcttcttca 25767652  T
Q  400 actcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    ||||||||||||||||||  |||||||||||||||||||||| |||||| ||| ||||||||||||||| ||||||||||||||||||    
T  25767653 actcttggaaactcttctcgcacttagcatcccaaacataagcttgtcctttctgagtcaactgcgtcaatggcaacgccaacttaga 25767740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 296 - 487
Target Start/End: Original strand, 16258375 - 16258565
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    ||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||| |||||     
T  16258375 aagcacaccaccaagacccatcaaagaagcataacaatacacaacaaacgattccttcagattcggtaaaatcaacactggagctgaagtcaacctcttc 16258474  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    ||||||||||||||||||||| | |||||  ||||||||||||||| ||| || ||||||||||||||||||| ||||||||||||||||||    
T  16258475 ttcaactcttggaaactcttc-tccacttgtcatcccaaacataagcttgccctttccgagtcaactgcgtcaatggcaacgccaacttaga 16258565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 296 - 460
Target Start/End: Complemental strand, 13966253 - 13966089
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||| |||||     
T  13966253 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattcctttggattcggcaaaatcaacactggagctgaagtcaacctcttc 13966154  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaa 460  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| ||| || ||||| |||||    
T  13966153 ttcaactcttggaaactcttctcacacttggcatcccaaacataagcttgccctttccgcgtcaa 13966089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 296 - 437
Target Start/End: Complemental strand, 16741612 - 16741471
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||     
T  16741612 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggcaaaatcaacactggagctgaagtcaacctcttc 16741513  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaaca 437  Q
    |||||||||||||||||||||| |||||| ||||||||||||    
T  16741512 ttcaactcttggaaactcttctcacacttggcatcccaaaca 16741471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 313 - 487
Target Start/End: Complemental strand, 55514624 - 55514450
Alignment:
Q  313 ccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctctttttcaactcttggaaact 412  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||| | | ||||||||||||| ||||| |||||||||| ||||||    
T  55514624 ccatcttagaagcatcgcaatacacaacaaatgattccttcggattcggaataatcaatattggagctgaagtcaacctcttcttcaactcttagaaact 55514525  T
Q  413 cttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    ||||| ||||||||||||| ||||||||| |||||||||  ||||||||| ||||| |||||||||||| |||||    
T  55514524 cttctcacacttagcatcctaaacataagcttgtcccttttgagtcaactacgtcaatggcaacgccaaattaga 55514450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 339 - 487
Target Start/End: Original strand, 18915000 - 18915148
Alignment:
Q  339 acaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctctttttcaactcttggaaactcttcttacacttagcatcccaaacat 438  Q
    ||||||||||||||||||||||| |||||||||||  ||||| ||||||| ||||| |||||||||||||||||||||| |||||| |||||||||| |     
T  18915000 acaaacgattccttcggattcggcaaaatcaacaccggagctaaagtcaacctcttcttcaactcttggaaactcttctcacacttggcatcccaaaaaa 18915099  T
Q  439 aagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    ||| |||||| ||||||||||||||||||| ||||||||||||||||||    
T  18915100 aagcttgtccattccgagtcaactgcgtcaatggcaacgccaacttaga 18915148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 135 - 272
Target Start/End: Original strand, 8603611 - 8603748
Alignment:
Q  135 tcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaa-ggagaaaatacaacaccttatgataaacatcatattcaa 233  Q
    |||||||||||||||| |||||| ||||||||  |||||  ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  8603611 tcaacatcaactatatcatatagttcaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaacaccttatgataaacatcatattcaa 8603710  T
Q  234 cacctaacaattcattcacacatcttcaattaatcatat 272  Q
    |||||||||| ||||||||| |||||||  |||||||||    
T  8603711 cacctaacaa-tcattcacatatcttcacataatcatat 8603748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 176 - 294
Target Start/End: Complemental strand, 14181249 - 14181132
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataac 275  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||| | ||||||||||     
T  14181249 tttcccacattccaaataaggagaaaatacaacaccttatgataaacatcatattcaacacttaacaa-tcattcacatatcttcattcaatcatataaa 14181151  T
Q  276 gctaatcacgaaagattta 294  Q
    |||| |||| |||||||||    
T  14181150 gctattcacaaaagattta 14181132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 296 - 380
Target Start/End: Original strand, 17194325 - 17194409
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagct 380  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||    
T  17194325 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattcatttggattcggaaaaatcaacactggagct 17194409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 122 - 293
Target Start/End: Original strand, 11401552 - 11401723
Alignment:
Q  122 atatatactttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagt-aaggagaaaatacaacaccttatgataa 220  Q
    |||||| | |||||||||||||||| ||| |||||| ||||||||| |||||| ||||||||| | ||||| |||||||||| ||| ||| |||||||||    
T  11401552 atatatgcattaatcaacatcaactttatcatatagttcaacaacttcatacaatttctcacaattcaagtaaaggagaaaacacagcacattatgataa 11401651  T
Q  221 acatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaagattt 293  Q
    ||||||||||||||| ||| ||| ||||||| ||| ||| |  ||||||||||| |||| |||| ||||||||    
T  11401652 acatcatattcaacaactagcaa-tcattcatacaactttatgtaatcatataaagctattcacaaaagattt 11401723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 176 - 291
Target Start/End: Complemental strand, 33370108 - 33369993
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataac 275  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||| ||||||| |||||  ||||||| |||||||||||||||| ||| ||||||||     
T  33370108 tttctcatattccaagtaaagagaaaatacaacaccttatgataaatatcatatccaacatataacaatccattcacacatcttcatttagtcatataag 33370009  T
Q  276 gctaatcacgaaagat 291  Q
    |||| |||| ||||||    
T  33370008 gctagtcactaaagat 33369993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 122 - 236
Target Start/End: Complemental strand, 5229303 - 5229188
Alignment:
Q  122 atatatactttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaa-ggagaaaatacaacaccttatgataa 220  Q
    |||||| | |||||| ||||||||||||| |||| | |||||||||||||||  ||||||||| | ||||||| |||||||||||||||| |||||||||    
T  5229303 atatatgcattaatcgacatcaactatatcatattgttcaacaactccatacgatttctcacaattcaagtaaaggagaaaatacaacacattatgataa 5229204  T
Q  221 acatcatattcaacac 236  Q
    ||||||||||||||||    
T  5229203 acatcatattcaacac 5229188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 176 - 291
Target Start/End: Original strand, 34558806 - 34558919
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataac 275  Q
    ||||||| |||||||||||| |||| |||||||| ||||||||||| ||||||| |||||  ||||||||||||| |||||||||| ||| ||||||||     
T  34558806 tttctcatattccaagtaag-agaacatacaacatcttatgataaatatcatat-caacatataacaattcattcgcacatcttcatttagtcatataag 34558903  T
Q  276 gctaatcacgaaagat 291  Q
    ||||||||||||||||    
T  34558904 gctaatcacgaaagat 34558919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 135 - 290
Target Start/End: Original strand, 41660494 - 41660648
Alignment:
Q  135 tcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaac 234  Q
    ||||||||||||| ||||||||  |  || |||||| | | ||||||| ||| ||||||| |||||||||||||||||||||||||| ||||||| ||||    
T  41660494 tcaacatcaactacataatataatttcaccactccaaata-tttctcatatttcaagtaaagagaaaatacaacaccttatgataaatatcatatccaac 41660592  T
Q  235 acctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaaga 290  Q
    |||   |||||||||| ||||| |||| ||| |||||||| |||| ||||||||||    
T  41660593 accccccaattcattctcacatattcatttagtcatataaggctagtcacgaaaga 41660648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 158 - 261
Target Start/End: Original strand, 14969840 - 14969942
Alignment:
Q  158 ctcaacaactccatacactttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatc 257  Q
    ||||||||||| ||||  ||||||||| ||||||||||| |||||| || ||   ||||||||||||||||||||||||||| ||| |||||||||||||    
T  14969840 ctcaacaactctatactatttctcacaatccaagtaaggggaaaatccatcatactatgataaacatcatattcaacacctatcaa-tcattcacacatc 14969938  T
Q  258 ttca 261  Q
    ||||    
T  14969939 ttca 14969942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 131 - 233
Target Start/End: Complemental strand, 43428831 - 43428727
Alignment:
Q  131 ttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaa--ggagaaaatacaacaccttatgataaacatcata 228  Q
    ||||||||| || ||||||| |||||| |||||||||||||||| ||||||| | | |||||||  |  |||||||||| ||||||||||||||||||||    
T  43428831 ttaatcaacttccactatatcatatagttcaacaactccatacaatttctcataatacaagtaatagaggaaaatacaataccttatgataaacatcata 43428732  T
Q  229 ttcaa 233  Q
    |||||    
T  43428731 ttcaa 43428727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 176 - 291
Target Start/End: Original strand, 48420583 - 48420697
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataac 275  Q
    ||||||| |||||||||||| |||| |||||||| ||||||||||| ||||||| |||||| ||| ||||| ||||||||||| || ||| ||||  ||     
T  48420583 tttctcatattccaagtaag-agaacatacaacatcttatgataaatatcatatccaacacataaaaattcgttcacacatctccatttagtcattcaag 48420681  T
Q  276 gctaatcacgaaagat 291  Q
    |||| |||||||||||    
T  48420682 gctagtcacgaaagat 48420697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 176 - 261
Target Start/End: Complemental strand, 38376947 - 38376862
Alignment:
Q  176 tttctcacattccaagtaa-ggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttca 261  Q
    ||||||| | ||||||||| |||||||||| |||||||||||||||||||||||  ||||||||||||| ||||||||| |||||||    
T  38376947 tttctcaaaatccaagtaaaggagaaaatataacaccttatgataaacatcatacacaacacctaacaa-tcattcacatatcttca 38376862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 25105255 - 25105151
Alignment:
Q  131 ttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagt-aaggagaaaatacaacaccttatgataaacatcatat 229  Q
    ||||||||| |||||||||| || ||| |||||||||||||||| |||| |||| | ||||| |||||||||||||||||||   ||||||||||| |||    
T  25105255 ttaatcaacttcaactatatcatttagttcaacaactccatacaatttcccacaattcaagtaaaggagaaaatacaacacc--gtgataaacatcgtat 25105158  T
Q  230 tcaacac 236  Q
    || ||||    
T  25105157 tcgacac 25105151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 274
Target Start/End: Original strand, 39654818 - 39654915
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataa 274  Q
    |||||||||||| ||||||| || | |||||||| ||||||| ||| ||||||| |||||  |||| ||||||||||||||||||| ||| ||||||||    
T  39654818 tttctcacattctaagtaag-aggacatacaacatcttatgacaaatatcatatccaacatataaccattcattcacacatcttcacttagtcatataa 39654915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 198 - 274
Target Start/End: Complemental strand, 17319803 - 17319728
Alignment:
Q  198 gaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataa 274  Q
    |||||||||||||||| |||||||||||| ||||||||| |||||||| | ||||| ||||||| ||||||| ||||    
T  17319803 gaaaatacaacaccttctgataaacatcaaattcaacacttaacaatt-actcacatatcttcatttaatcagataa 17319728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 131 - 233
Target Start/End: Original strand, 18968991 - 18969095
Alignment:
Q  131 ttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaa-ggag-aaaatacaacaccttatgataaacatcata 228  Q
    |||||| || |||||||||| |||||| |||||| |||||| ||  |||||| | | ||||||| |||| ||||||||||||||||||||||| ||||||    
T  18968991 ttaatccacttcaactatatcatatagttcaacagctccattcaacttctcataatacaagtaaaggaggaaaatacaacaccttatgataaatatcata 18969090  T
Q  229 ttcaa 233  Q
    |||||    
T  18969091 ttcaa 18969095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 177 - 291
Target Start/End: Complemental strand, 54652961 - 54652848
Alignment:
Q  177 ttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacg 276  Q
    |||||| |||||||||||| |||| |||||||| |  |||| ||| ||||||| |||||  |||| ||||||||||||||||||| ||| |||||||| |    
T  54652961 ttctcatattccaagtaag-agaacatacaacatcccatgacaaatatcatatacaacatataaccattcattcacacatcttcacttagtcatataagg 54652863  T
Q  277 ctaatcacgaaagat 291  Q
     || |||||| ||||    
T  54652862 atagtcacgatagat 54652848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 196 - 292
Target Start/End: Complemental strand, 13327787 - 13327691
Alignment:
Q  196 gagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttca-attaatcatataacgctaatcacgaaagatt 292  Q
    ||||||||||| ||  |||||||||| ||||||| ||||| ||||||||||| |||||||||||||  ||| ||| |||| |||| ||||||||||||    
T  13327787 gagaaaatacatcatattatgataaatatcatatccaacatctaacaattca-tcacacatcttcattttagtcacataaagctagtcacgaaagatt 13327691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 17203596 - 17203707
Alignment:
Q  178 tctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgc 277  Q
    ||||| |||||||||||| |||| |||||||| ||||||||||| |||||| ||||||  | || ||||||||| ||||||||| ||| |||||| | ||    
T  17203596 tctcatattccaagtaag-agaacatacaacatcttatgataaatatcata-tcaacatttcaccattcattcatacatcttcatttagtcatatgaagc 17203693  T
Q  278 taatcacgaaagat 291  Q
    || |||| ||||||    
T  17203694 tagtcacaaaagat 17203707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 179 - 271
Target Start/End: Complemental strand, 54039782 - 54039689
Alignment:
Q  179 ctcacattccaagtaaggag-aaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcata 271  Q
    |||||||||||||||| ||| ||||||   ||||||| ||||||||||| || |||||  |||| ||||||||||||||||||| ||| |||||    
T  54039782 ctcacattccaagtaaagaggaaaatatgtcaccttaagataaacatcacatccaacatataaccattcattcacacatcttcacttagtcata 54039689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 258
Target Start/End: Complemental strand, 12489959 - 12489881
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatct 258  Q
    ||||||| |||||||||||| |||| ||||| |   |||||||||| ||||||| |||||| |||||||||||||||||||||    
T  12489959 tttctcatattccaagtaag-agaacatacatc---ttatgataaatatcatatccaacacataacaattcattcacacatct 12489881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 188 - 251
Target Start/End: Complemental strand, 9591986 - 9591923
Alignment:
Q  188 caagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattca 251  Q
    ||||||| |||||||||||||| |||||||| || ||||||| || || |||||||||||||||    
T  9591986 caagtaaagagaaaatacaacatcttatgatcaatatcatatccagcatctaacaattcattca 9591923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 261
Target Start/End: Original strand, 12951918 - 12952041
Alignment:
Q  135 tcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaac 234  Q
    ||||||||||||| || |||||| |  || |||||| | | ||||||| |||||||||||| |||| |||||||| ||||||||||| ||||||| |  |    
T  12951918 tcaacatcaactacatcatatagtttcaccactccaaata-tttctcatattccaagtaag-agaacatacaacatcttatgataaatatcatat-ctcc 12952014  T
Q  235 acctaacaattcattcacacatcttca 261  Q
    |  |||||| |||||||||||||||||    
T  12952015 atataacaaatcattcacacatcttca 12952041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 294
Target Start/End: Complemental strand, 31413553 - 31413435
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataac 275  Q
    |||| |||||||||||||| ||  ||||| || ||||| |||| ||||| |||| ||||||  ||||| ||| ||||| | ||| | ||||||||| ||     
T  31413553 tttcccacattccaagtaaagatgaaatataataccttttgatgaacattatatccaacacacaacaagtcactcacataactttatttaatcatacaaa 31413454  T
Q  276 gctaatcacgaaagattta 294  Q
    |||| ||||||||||||||    
T  31413453 gctattcacgaaagattta 31413435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 214 - 291
Target Start/End: Original strand, 19945567 - 19945644
Alignment:
Q  214 atgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaagat 291  Q
    ||||||||||||||||  ||||  |||| ||||||||||||||||||| ||| |||||||| | || |||||| ||||    
T  19945567 atgataaacatcatatcaaacatataaccattcattcacacatcttcacttagtcatataaggatagtcacgatagat 19945644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 7852855 - 7852915
Alignment:
Q  214 atgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataa 274  Q
    |||||||||||||||| ||| |  |||| ||||||||||||||||||| ||| ||||||||    
T  7852855 atgataaacatcatatccaaaatataaccattcattcacacatcttcacttagtcatataa 7852915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 139 - 210
Target Start/End: Complemental strand, 17759615 - 17759543
Alignment:
Q  139 catcaactatataatatagctcaacaactccatacactttctcacattccaagt-aaggagaaaatacaacac 210  Q
    |||||||||||| |||||  | |||||||||||| ||||||||||| ||||| | || |||||||||||||||    
T  17759615 catcaactatatcatataatttaacaactccatatactttctcacaatccaattaaaagagaaaatacaacac 17759543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 139 - 210
Target Start/End: Complemental strand, 19060935 - 19060863
Alignment:
Q  139 catcaactatataatatagctcaacaactccatacactttctcacattccaagt-aaggagaaaatacaacac 210  Q
    |||||||||||| |||||  | |||||||||||| ||||||||||| ||||| | || |||||||||||||||    
T  19060935 catcaactatatcatataatttaacaactccatatactttctcacaatccaattaaaagagaaaatacaacac 19060863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 279
Target Start/End: Complemental strand, 11516733 - 11516631
Alignment:
Q  177 ttctcacattccaagtaagga-gaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataac 275  Q
    |||||||| ||||||||| || ||||||||| ||  ||| |||||| ||||| ||||||||||| ||||| ||||| ||||||| |  |||||||||||     
T  11516733 ttctcacaatccaagtaaagaagaaaatacatcatattaagataaatatcattttcaacacctagcaatt-attcatacatctttatgtaatcatataaa 11516635  T
Q  276 gcta 279  Q
    ||||    
T  11516634 gcta 11516631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 257
Target Start/End: Complemental strand, 14522506 - 14522463
Alignment:
Q  214 atgataaacatcatattcaacacctaacaattcattcacacatc 257  Q
    |||||||| ||||||| |||||| ||||||||||||||||||||    
T  14522506 atgataaatatcatatccaacacataacaattcattcacacatc 14522463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 291
Target Start/End: Original strand, 15516651 - 15516765
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataac 275  Q
    |||||||||||| ||||||| || | |||| | | ||||||| ||| ||||||| |||||  |||| |||||||||||||||| || ||| ||||| ||     
T  15516651 tttctcacattctaagtaag-aggacataccatatcttatgacaaatatcatatccaacatataaccattcattcacacatctccatttagtcatacaag 15516749  T
Q  276 gctaatcacgaaagat 291  Q
    |||| |||| ||||||    
T  15516750 gctagtcactaaagat 15516765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 17937157 - 17937215
Alignment:
Q  179 ctcacattccaagtaagga-gaaaatacaacaccttatgataaacatcatattcaacac 236  Q
    |||||||||||||||| || ||||||||| ||||||| ||| ||||||| |||||||||    
T  17937157 ctcacattccaagtaaagaggaaaatacatcaccttaagatgaacatcacattcaacac 17937215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 284
Target Start/End: Complemental strand, 21167948 - 21167863
Alignment:
Q  198 gaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgctaatcac 284  Q
    |||||||||||| ||| |||||||| ||| ||||||||||| || ||| | ||||| ||||||| | ||||||||||  ||||||||    
T  21167948 gaaaatacaacatcttgtgataaacctcacattcaacacct-accatttactcacatatcttcattcaatcatataaaactaatcac 21167863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 345
Target Start/End: Original strand, 10384906 - 10384951
Alignment:
Q  300 acaccaccaagacccatcttagaagcatcacaatacacaacaaacg 345  Q
    |||||||| || |||| |||||| ||||||||||||||||||||||    
T  10384906 acaccacctaggcccagcttagatgcatcacaatacacaacaaacg 10384951  T

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Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 200 - 292
Target Start/End: Original strand, 14079522 - 14079612
Alignment:
Q  200 aaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaagatt 292  Q
    |||||||||| || |||||||| ||||||| ||||| ||| |||||||| |||||| ||||| |||  || |||| |||| ||||||||||||    
T  14079522 aaatacaacatctcatgataaatatcatatccaacatcta-caattcat-cacacaccttcatttagacacataaggctagtcacgaaagatt 14079612  T

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Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 135 - 235
Target Start/End: Complemental strand, 17957629 - 17957531
Alignment:
Q  135 tcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaac 234  Q
    |||||||||||||||| |||||| |  || | |||| |||  |||||| ||||||||||| ||||| |||||||| || |||||||| ||||||| ||||    
T  17957629 tcaacatcaactatatcatatagtttcaccattccaaaca-attctcatattccaagtaa-gagaacatacaacatctcatgataaatatcatatccaac 17957532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 152; Significance: 3e-80; HSPs: 2)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 296 - 487
Target Start/End: Complemental strand, 1619 - 1428
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||     
T  1619 aagcacaccaccaagacccatcttagacgcatcacaatacacaacaaacgattccttcggattcggtaaaatcaacacttgagctgaagtcaacctcttc 1520  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||| || ||||||||||||||||  |||||||||||||||||    
T  1519 ttcaactcttggaaactcttctcacacttagcatcccaaacataagcttgtccttttcgagtcaactgcgtcaacggcaacgccaacttaga 1428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 306 - 487
Target Start/End: Original strand, 4187 - 4358
Alignment:
Q  306 ccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctctttttcaactctt 405  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||| | ||| |||           
T  4187 ccaagacctatcttagaagcatcacaatacacaacaaacgattccttcggattcggcaaaatcaacactggagcagaagtcaaccacttcttc------- 4279  T
Q  406 ggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
       ||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||| ||| ||||||||||| ||||||    
T  4280 ---aactcttctcacacttagcatcccaaacataagtttgtcctttctgagtcaactgcatcaatggcaacgccaccttaga 4358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 152; Significance: 3e-80; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 296 - 487
Target Start/End: Complemental strand, 2548 - 2357
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||| |||||     
T  2548 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggcaaaatcaacaccggagctgaagtcaacctcttc 2449  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||    
T  2448 ttcaactcttggaaactcttctcacacttggcatcccaaacataagcttgtcctttccgagtcaactgcgtcaatggcaacgccaacttaga 2357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 152; Significance: 3e-80; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 296 - 487
Target Start/End: Original strand, 25027 - 25218
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||| |||||     
T  25027 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggcaaaatcaacaccggagctgaagtcaacctcttc 25126  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||    
T  25127 ttcaactcttggaaactcttctcacacttggcatcccaaacataagcttgtcctttccgagtcaactgcgtcaatggcaacgccaacttaga 25218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 152; Significance: 3e-80; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 296 - 487
Target Start/End: Complemental strand, 6481 - 6290
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||     
T  6481 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggcaaaatcaacactggagctgaagtcaacctcttc 6382  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| |||||| ||||||||||||||||||| ||||||| ||||||||||    
T  6381 ttcaactcttggaaactcttctcacacttggcatcccaaacataagcttgtcctttccgagtcaactgcgtcaatggcaacaccaacttaga 6290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 152; Significance: 3e-80; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 296 - 491
Target Start/End: Complemental strand, 26939 - 26744
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||| |||||     
T  26939 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacaattccttcggattcggcaaaatcaacactggagctgaagtcaacctcttc 26840  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttagaaaat 491  Q
    |||||||||||||||||||||| ||||||||||||||||||||| | |||||| ||||||||||| ||||||| ||||||||||||||||||||||    
T  26839 ttcaactcttggaaactcttctcacacttagcatcccaaacatacgcttgtcctttccgagtcaagtgcgtcaatggcaacgccaacttagaaaat 26744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 296 - 487
Target Start/End: Complemental strand, 25618 - 25437
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||| |||||     
T  25618 aagcacactgccaagacccatcttagaagcatcacaatacacaacaaatgattccttcggattcggcaaaatcaacactggagctgaagtcaacctcttc 25519  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||||          | |||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||    
T  25518 ttcaactcttg----------tcacacttagcatcccaaacataagtttgtcctttctgagtcaactgcgtcaatggcaacgccaacttaga 25437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 152; Significance: 3e-80; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 296 - 487
Target Start/End: Complemental strand, 16381188 - 16380997
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||| |||||     
T  16381188 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggcaaaatcaacaccggagctgaagtcaacctcttc 16381089  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||    
T  16381088 ttcaactcttggaaactcttctcacacttggcatcccaaacataagcttgtcctttccgagtcaactgcgtcaatggcaacgccaacttaga 16380997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 296 - 487
Target Start/End: Complemental strand, 1647629 - 1647438
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||| ||||||| |||||     
T  1647629 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaatgattccttcggattcggcaaaatcaacactggagctaaagtcaacctcttc 1647530  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||    
T  1647529 ttcaactcttggaaactcttctcacacttggcatcccaaacataagcttgtcctttccgagtcaactgcgtcaatggcaacgccaacttaga 1647438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 296 - 487
Target Start/End: Original strand, 16099475 - 16099666
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| ||||||||||||| |||||     
T  16099475 aagcacaccaccaagacccatcttagaagcatcacaatatacaacaaacgaatccttcggattcggcaaaatcaacactggagctgaagtcaacctcttc 16099574  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||| |||||| ||||||||||||||||||  ||||||||||||||||||    
T  16099575 ttcaactcttggaaacttttctcacacttagcatcccaaacataagcttgtcctttccgagtcaactgcgtcgatggcaacgccaacttaga 16099666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 296 - 487
Target Start/End: Complemental strand, 16648784 - 16648593
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||  ||||||||||||| |||||     
T  16648784 aagcacaccaccaagacccatcttagaagcatcacaatacaccacaaacgattccttcggattcggcaaaatcaacaccggagctgaagtcaacctcttc 16648685  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    ||||||||||||||||||||||  ||||| |||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||    
T  16648684 ttcaactcttggaaactcttctcgcacttggcatcccaaacataagcttgtcctttccgagtcaactgcgtcaatggcaacgccaacttaga 16648593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 296 - 487
Target Start/End: Original strand, 23997714 - 23997905
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||  ||||||||||||| |||||     
T  23997714 aagcacaccaccaagatccatcttagaagcatcacaatacacaacaaacgattccttcggatttggcaaaatcaacaccggagctgaagtcaacctcttc 23997813  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||    
T  23997814 ttcaactcttggaaactcttctcacacttggcatcccaaacataagcttgtcctttccgagtcaactgcgtcaatggcaacgccaacttaga 23997905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 296 - 487
Target Start/End: Complemental strand, 18836723 - 18836532
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||| |||||||| |||| |||||     
T  18836723 aagcacaccaccaagtcccatcttagaagcttcacaatacacaacaaacgattcctttggattcggcaaaatcaacactagagctgaaatcaacctcttc 18836624  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    ||||||||||||||||| |||| |||||| |||||||||||||||| |||||| ||||||||||||||| ||| ||||||||||||||||||    
T  18836623 ttcaactcttggaaacttttctcacacttggcatcccaaacataagcttgtcctttccgagtcaactgcttcaatggcaacgccaacttaga 18836532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 296 - 487
Target Start/End: Original strand, 16234494 - 16234685
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    ||||||||||||||| ||||||||||||| |||||| ||||| ||||| ||||||||||||||||| |||||||||||| | || |||||||| |||||     
T  16234494 aagcacaccaccaagtcccatcttagaagtatcacagtacaccacaaatgattccttcggattcggcaaaatcaacactagggccgaagtcaacctcttc 16234593  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||    
T  16234594 ttcaactcttggaaactcttctcacacttggcatcccaaacataagcttgtcctttccgagtcaactgcgtcaatggcaacgccaacttaga 16234685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 296 - 487
Target Start/End: Complemental strand, 19986231 - 19986040
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||| |||||||||| |||| | |||||||||||| ||| |||| |||| |||||     
T  19986231 aagcacaccacccaaacccatcttagaagcatcacaatacacaacaaaggattccttcgaattcagcaaaatcaacactggagttgaattcaacctcttc 19986132  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||    
T  19986131 ttcaactcttggaaactcttctcacacttggcatcccaaacataagcttgccccttccgagtcaactgcgtcaatggcaacgccaacttaga 19986040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 296 - 491
Target Start/End: Original strand, 14129935 - 14130130
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||   |||||||||||| |||||     
T  14129935 aagcaaaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggcaaaatcaacaccaaagctgaagtcaacctcttc 14130034  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttagaaaat 491  Q
    ||||||||||||||| |||||| |||||| || ||||||||||||| ||| || ||| ||||||||| ||||| ||||||||| ||||||||||||    
T  14130035 ttcaactcttggaaattcttctcacacttggcgtcccaaacataagcttgccctttctgagtcaactacgtcaatggcaacgctaacttagaaaat 14130130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 296 - 487
Target Start/End: Original strand, 21928671 - 21928862
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||| |||| |  |||||||||||| ||||||||||||| |||||     
T  21928671 aagcacaccaccaagactcaacttagaagcatcacaatacacaacaaaagattccttcagatttgacaaaatcaacactggagctgaagtcaacctcttc 21928770  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||| || |||||||| |||||| ||| ||||||||||||||||||    
T  21928771 ttcaactcttggaaactcttctcacacttagcatcccaaacataagcttgccctttccgagttaactgcatcaatggcaacgccaacttaga 21928862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 72 - 294
Target Start/End: Original strand, 34965747 - 34965971
Alignment:
Q  72 catcatcacattgtcatcataatttttaataatcatcaacattaattgatatatatactt---taatcaacatcaactatataatatagctcaacaactc 168  Q
    ||||||||||| |||||||||||| | |||||| |||||||| ||||||||||||||  |   ||||||||||||||||||||||||||  | || ||||    
T  34965747 catcatcacatggtcatcataattatcaataattatcaacatcaattgatatatatatatcaataatcaacatcaactatataatatagtcccaccactc 34965846  T
Q  169 catacactttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatc 268  Q
    || |||||| |||| ||||||||||| ||||||||| |||||||||||||||| ||||||||||||| ||||||||||||| ||| ||||||| ||||||    
T  34965847 caaacactt-ctcatattccaagtaaagagaaaataaaacaccttatgataaatatcatattcaacatctaacaattcatttacatatcttcatttaatc 34965945  T
Q  269 atataacgctaatcacgaaagattta 294  Q
    |||||| |||| ||||||||||||||    
T  34965946 atataaagctagtcacgaaagattta 34965971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 345 - 487
Target Start/End: Original strand, 18577724 - 18577866
Alignment:
Q  345 gattccttcggattcggaaaaatcaacacttgagctgaagtcaatctctttttcaactcttggaaactcttcttacacttagcatcccaaacataagttt 444  Q
    ||||||||||||||||| |||||||||||| ||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||| |||||    
T  18577724 gattccttcggattcggcaaaatcaacactggagctgaagtcaacctcttcttcaactcttggaaactcttctcacacttagcatcccaaacattagttt 18577823  T
Q  445 gtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||| ||||||||||||||||||| ||||||||||||||||||    
T  18577824 gtcctttccgagtcaactgcgtcaatggcaacgccaacttaga 18577866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 296 - 487
Target Start/End: Complemental strand, 23026531 - 23026349
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||          || |||||||||||| ||||||||||||| |||||     
T  23026531 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattc----------ggcaaaatcaacactagagctgaagtcaaactcttc 23026442  T
Q  396 ttcaactcttgga-aactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    ||||||||||    ||||||||| ||||||||||||||||||||||| |||||| ||||||||||||| ||||| ||||||||||||||||||    
T  23026441 ttcaactcttcttcaactcttctcacacttagcatcccaaacataagcttgtcctttccgagtcaactacgtcaatggcaacgccaacttaga 23026349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 296 - 373
Target Start/End: Complemental strand, 35274901 - 35274824
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacac 373  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  35274901 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggcaaaatcaacac 35274824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 122 - 270
Target Start/End: Complemental strand, 17084547 - 17084398
Alignment:
Q  122 atatatactttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagt-aaggagaaaatacaacaccttatgataa 220  Q
    |||||| | ||||||||||| |||||||| |||||| |||||||||||||||| ||||||||| | ||||| || ||||||||||||||| |||||||||    
T  17084547 atatatgcattaatcaacataaactatatcatatagttcaacaactccatacaatttctcacaatacaagtaaatgagaaaatacaacacattatgataa 17084448  T
Q  221 acatcatattcaa-cacctaacaattcattcacacatcttcaattaatcat 270  Q
    ||||||||||||| ||||||| ||  |||||||| |||||||  |||||||    
T  17084447 acatcatattcaatcacctaa-aaagcattcacatatcttcatataatcat 17084398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 135 - 292
Target Start/End: Complemental strand, 29161623 - 29161467
Alignment:
Q  135 tcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaa-ggagaaaatacaacaccttatgataaacatcatattcaa 233  Q
    |||||||||||||||| |||||| || ||||||||||| ||||| |||||| |||||||| |||||||||||  ||| ||||||||||||||||||||||    
T  29161623 tcaacatcaactatatcatatagttcgacaactccatatactttttcacat-ccaagtaaaggagaaaatacttcacattatgataaacatcatattcaa 29161525  T
Q  234 cacctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaagatt 292  Q
    ||| |||||||| | ||||| ||||||| ||| ||| |||| |||| | || |||||||    
T  29161524 cacttaacaatt-actcacatatcttcatttagtcacataaagctatttacaaaagatt 29161467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 131 - 294
Target Start/End: Complemental strand, 22463406 - 22463242
Alignment:
Q  131 ttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaa-ggag-aaaatacaacaccttatgataaacatcata 228  Q
    ||||||||| ||||||||||  ||||| |||| | || |  ||| ||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||    
T  22463406 ttaatcaacttcaactatatcctatagttcaaaaccttcgcacaatttctcacaatccaagtaaaggaggaaaatacaacaccttatgataaacatcata 22463307  T
Q  229 ttcaacacctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaagattta 294  Q
    ||||| |||| |||||| | ||||| ||||||| | |||||||||| |||| |||| |||||||||    
T  22463306 ttcaagacctcacaatt-actcacatatcttcattcaatcatataaagctattcacaaaagattta 22463242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 177 - 294
Target Start/End: Original strand, 19853122 - 19853238
Alignment:
Q  177 ttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacg 276  Q
    |||||| ||| |||||||| ||||||||||||||| ||||||||| ||||||| |||||| |||||||||||||||||||||||| ||| || ||||| |    
T  19853122 ttctcatatttcaagtaag-agaaaatacaacaccctatgataaatatcatatccaacacttaacaattcattcacacatcttcatttagtcttataaag 19853220  T
Q  277 ctaatcacgaaagattta 294  Q
    | | ||||||| ||||||    
T  19853221 caagtcacgaaggattta 19853238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 135 - 291
Target Start/End: Original strand, 22847013 - 22847168
Alignment:
Q  135 tcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaac 234  Q
    ||||||||||||| || |||||| |  || |||||| | | ||||||| |||| |||||| |||||||||||||| ||||||||||| ||||||| ||||    
T  22847013 tcaacatcaactacatcatatagtttcaccactccaaata-tttctcatattcaaagtaaagagaaaatacaacaacttatgataaatatcatatccaac 22847111  T
Q  235 acctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaagat 291  Q
    |  |||||||||||||| ||||||||| ||| ||||||||   || |||||||||||    
T  22847112 atataacaattcattcaaacatcttcatttagtcatataagtttagtcacgaaagat 22847168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 122 - 261
Target Start/End: Original strand, 23220678 - 23220816
Alignment:
Q  122 atatatactttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagt-aaggagaaaatacaacaccttatgataa 220  Q
    |||||| | |||||||||||||||||||| |||||| ||||||||| |||| | ||||||||| | ||||| |||||||||||  ||||| |||||||||    
T  23220678 atatatgcattaatcaacatcaactatatcatatagttcaacaact-catataatttctcacaattcaagtaaaggagaaaatgaaacacattatgataa 23220776  T
Q  221 acatcatattcaacacctaacaattcattcacacatcttca 261  Q
    |||||||||| ||||||| | || ||||||||| |||||||    
T  23220777 acatcatattaaacacct-agaaatcattcacatatcttca 23220816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 176 - 274
Target Start/End: Complemental strand, 22594569 - 22594471
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataa 274  Q
    |||| |||||||||||||| ||| ||||||||||||||||||| |||||||||| ||||||||||||| ||| ||| | |||||||  |||||||||||    
T  22594569 tttcccacattccaagtaaagaggaaatacaacaccttatgatgaacatcatatccaacacctaacaagtcactcaaatatcttcatataatcatataa 22594471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 160 - 272
Target Start/End: Original strand, 16375278 - 16375390
Alignment:
Q  160 caacaactccatacactttctcacattccaagtaa-ggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatct 258  Q
    |||||||| |||||| ||||||||| | ||||||| ||||||||||||||||  ||||||||||||||||||| |||||| | || ||||||||||||||    
T  16375278 caacaacttcatacaatttctcacaattcaagtaaaggagaaaatacaacacactatgataaacatcatattccacacct-agaaatcattcacacatct 16375376  T
Q  259 tcaattaatcatat 272  Q
    |||  |||||||||    
T  16375377 tcatataatcatat 16375390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 135 - 294
Target Start/End: Complemental strand, 11374038 - 11373879
Alignment:
Q  135 tcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagt-aaggagaaaatacaacaccttatgataaacatcatattcaa 233  Q
    |||||||||||||||| |||||| |||||||||| ||| ||| ||||||| ||||||| |||||||||||||||  | ||| ||||||| ||  ||  ||    
T  11374038 tcaacatcaactatatcatatagttcaacaactctatatactatctcacaatccaagtaaaggagaaaatacaaagcattaggataaacctcgcataaaa 11373939  T
Q  234 cacctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaagattta 294  Q
     || || ||| ||||||||| ||||||| | |||||||||| |||| ||||||||||||||    
T  11373938 aacttagcaa-tcattcacatatcttcattcaatcatataaagctattcacgaaagattta 11373879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 160 - 233
Target Start/End: Complemental strand, 31162164 - 31162090
Alignment:
Q  160 caacaactccatacactttctcacattccaagtaa-ggagaaaatacaacaccttatgataaacatcatattcaa 233  Q
    |||||||| |||||| ||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||    
T  31162164 caacaacttcatacagtttctcacaattcaagtaaaggagaaaatacaacaccttatgataaacatcatattcaa 31162090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 176 - 272
Target Start/End: Original strand, 26505779 - 26505874
Alignment:
Q  176 tttctcacattccaagtaag-gagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatat 272  Q
    ||||||||  |||||||||  ||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||    
T  26505779 tttctcacgatccaagtaaatgagaaaatacaacacatt-tgataaacatcatattcaacacctaacaa-tcattcacatatcttcatttaatcatat 26505874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 194
Target Start/End: Original strand, 16135260 - 16135332
Alignment:
Q  122 atatatactttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaa 194  Q
    |||||| | |||||||||||||||||||| |||||| |||| ||||||||||| ||||||||| |||||||||    
T  16135260 atatatgcattaatcaacatcaactatatcatatagttcaataactccatacaatttctcacaatccaagtaa 16135332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 221 - 292
Target Start/End: Original strand, 25650100 - 25650171
Alignment:
Q  221 acatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaagatt 292  Q
    ||||||||| ||||| ||||||||||||||||||||||||| ||| |||||||| |||| |||| |||||||    
T  25650100 acatcatatccaacatctaacaattcattcacacatcttcatttagtcatataaggctattcacaaaagatt 25650171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 214 - 291
Target Start/End: Original strand, 18582229 - 18582306
Alignment:
Q  214 atgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaagat 291  Q
    |||||||||||||||| |||||  |||| ||||||||||||||||||| ||| |||||||| | || |||||| ||||    
T  18582229 atgataaacatcatatccaacatataaccattcattcacacatcttcacttagtcatataaggatagtcacgatagat 18582306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 178 - 291
Target Start/End: Complemental strand, 22363452 - 22363341
Alignment:
Q  178 tctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgc 277  Q
    ||||| |||||||||||| |||| |||||||| ||||||||||  ||||||| |||||  | |||||||||||| ||||||||| ||| |||||| | ||    
T  22363452 tctcatattccaagtaag-agaacatacaacatcttatgataagtatcatat-caacatatcacaattcattcatacatcttcatttagtcatatgaagc 22363355  T
Q  278 taatcacgaaagat 291  Q
    || |||| ||||||    
T  22363354 tagtcacaaaagat 22363341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 292
Target Start/End: Complemental strand, 35137246 - 35137133
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataac 275  Q
    ||||||| |||||||||||| ||||||||||||| || | |||||  ||||||||||||| || |||||||| ||||||| ||||| |||  || ||||     
T  35137246 tttctcatattccaagtaag-agaaaatacaacatctcaggataagtatcatattcaacatct-acaattca-tcacacaccttcatttagacacataag 35137150  T
Q  276 gctaatcacgaaagatt 292  Q
    |||| ||||||||||||    
T  35137149 gctagtcacgaaagatt 35137133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 167 - 272
Target Start/End: Complemental strand, 17857678 - 17857573
Alignment:
Q  167 tccatacactttctcacattccaagtaagga-gaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaatta 265  Q
    ||||||||  |||||||| | ||||||| || ||||||||||||| |||||||||| ||||| ||||||||||| | | ||||| ||| |||||||  ||    
T  17857678 tccatacaagttctcacaattcaagtaaagaagaaaatacaacacattatgataaatatcatgttcaacacctagcta-tcattaacatatcttcatata 17857580  T
Q  266 atcatat 272  Q
    |||||||    
T  17857579 atcatat 17857573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 213 - 270
Target Start/End: Complemental strand, 4172805 - 4172749
Alignment:
Q  213 tatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcat 270  Q
    ||||||||||||||||||||||||||| ||| ||||||| |||||||||  |||||||    
T  4172805 tatgataaacatcatattcaacacctatcaa-tcattcatacatcttcatataatcat 4172749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 289
Target Start/End: Complemental strand, 18382913 - 18382831
Alignment:
Q  206 aacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaag 289  Q
    |||| ||||||||||| ||||||| |||||   ||||| ||||||||||||||||| ||| |||||||  |||| |||||||||    
T  18382913 aacatcttatgataaatatcatat-caacatacaacaagtcattcacacatcttcatttagtcatatacggctagtcacgaaag 18382831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 72 - 115
Target Start/End: Original strand, 19853036 - 19853079
Alignment:
Q  72 catcatcacattgtcatcataatttttaataatcatcaacatta 115  Q
    |||||||||||||||||||||||  | |||||||||||||||||    
T  19853036 catcatcacattgtcatcataatcatcaataatcatcaacatta 19853079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 293
Target Start/End: Complemental strand, 26523410 - 26523339
Alignment:
Q  222 catcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaagattt 293  Q
    |||||||||||||||||||| | ||||||||||||||||   ||||||||| | ||||  ||| ||||||||    
T  26523410 catcatattcaacacctaactaatcattcacacatcttcgtataatcatatcaagctatacacaaaagattt 26523339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 284
Target Start/End: Original strand, 32351047 - 32351132
Alignment:
Q  198 gaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgctaatcac 284  Q
    |||||||||||||||| |||||||| ||| |||||||| || || ||| | ||||| ||||||| | ||||||||||  ||||||||    
T  32351047 gaaaatacaacaccttgtgataaacctcacattcaaca-cttaccatttactcacatatcttcattcaatcatataaaactaatcac 32351132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 270
Target Start/End: Complemental strand, 4228414 - 4228358
Alignment:
Q  213 tatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcat 270  Q
    ||||||||||||||||||||||||||| ||| ||||||| |||| ||||  |||||||    
T  4228414 tatgataaacatcatattcaacacctatcaa-tcattcatacatattcatataatcat 4228358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 292
Target Start/End: Original strand, 33323685 - 33323798
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataac 275  Q
    ||||||| ||||||||||| ||| |||||||||| || | |||||  ||||||||| ||| || |||||||| ||||||| ||||| |||  || ||||     
T  33323685 tttctcatattccaagtaa-gaggaaatacaacatctcaagataagtatcatattccacatct-acaattca-tcacacaccttcatttagacacataag 33323781  T
Q  276 gctaatcacgaaagatt 292  Q
    |||| ||||||||||||    
T  33323782 gctagtcacgaaagatt 33323798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 152; Significance: 3e-80; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 296 - 487
Target Start/End: Complemental strand, 20830134 - 20829943
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||| |||||     
T  20830134 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggcaaaatcaacaccggagctgaagtcaacctcttc 20830035  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||    
T  20830034 ttcaactcttggaaactcttctcacacttggcatcccaaacataagcttgtcctttccgagtcaactgcgtcaatggcaacgccaacttaga 20829943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 296 - 487
Target Start/End: Original strand, 20915218 - 20915409
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||     
T  20915218 aagcacaccaccaagacccatcttagaagcaacacaatacacaacaaacgattccttcggattcggtaaaatcaacactggagctgaagtcaacctcttc 20915317  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||| || |||||||| |||||||||    
T  20915318 ttcaactcttggaaactcttctcacacttagcatcccaaacataagcttgtcctttccgagtcaactgcgccaatggcaacgtcaacttaga 20915409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 296 - 487
Target Start/End: Complemental strand, 22134299 - 22134108
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| || ||||||||||||| |||||     
T  22134299 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattcctttggattcggcaaaatcaactctggagctgaagtcaacctcttc 22134200  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||| |||||||||| || ||||||||||||| ||||||||| |||||| |||| |||||||||||||| ||||||||||||||||||    
T  22134199 ttcaactcctggaaactctactcacacttagcatcctaaacataagcttgtcctttccaagtcaactgcgtcaatggcaacgccaacttaga 22134108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 296 - 487
Target Start/End: Complemental strand, 41216599 - 41216408
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||  ||||||||||||| |||||     
T  41216599 aagcacaccaccaagacccatcttataagcatcacaatacacaacaaaggattccttcggattcggcaaaatcaacacgggagctgaagtcaacctcttc 41216500  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    || |||||||| |||||||||| ||||||||||||||||||||||| |||||| ||||||||||||| ||||| ||||||| ||||| ||||    
T  41216499 tttaactcttgaaaactcttctcacacttagcatcccaaacataagcttgtcctttccgagtcaactacgtcaatggcaacaccaacctaga 41216408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 72 - 294
Target Start/End: Complemental strand, 5769542 - 5769321
Alignment:
Q  72 catcatcacattgtcatcataatttttaataatcatcaacattaattgatatatatactttaatcaacatcaactatataatatagctcaacaactccat 171  Q
    ||||||||||||| |||||||||| | ||||||||||||||| |||||||||||| || ||||||||||||||| ||||||||||| || || ||| ||     
T  5769542 catcatcacattgccatcataattatcaataatcatcaacatcaattgatatataaacattaatcaacatcaacaatataatatagttccaccacttcaa 5769443  T
Q  172 acactttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcata 271  Q
    | |||| |||| ||||||||||| |||||||| ||||||||||||||||| ||||||||| ||| ||||||| ||||||||| ||||||| ||| |||||    
T  5769442 atactt-ctcatattccaagtaaagagaaaatgcaacaccttatgataaatatcatattcgacatctaacaactcattcacatatcttcatttagtcata 5769344  T
Q  272 taacgctaatcacgaaagattta 294  Q
    ||| |||| ||||||||||||||    
T  5769343 taaggctagtcacgaaagattta 5769321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 135 - 291
Target Start/End: Complemental strand, 8539247 - 8539092
Alignment:
Q  135 tcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaac 234  Q
    ||||||||||||| || |||||| |  ||| ||||| | | ||||||| ||||||||||| ||||||||||||||| |||||||||| ||||||| ||||    
T  8539247 tcaacatcaactacatcatatagtttcacagctccaaata-tttctcatattccaagtaaagagaaaatacaacacgttatgataaatatcatatccaac 8539149  T
Q  235 acctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaagat 291  Q
    |  |||||||||||||||||||||||| ||| |||||||| |||| |||||||||||    
T  8539148 atataacaattcattcacacatcttcatttagtcatataaggctagtcacgaaagat 8539092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 135 - 291
Target Start/End: Complemental strand, 8604486 - 8604331
Alignment:
Q  135 tcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaac 234  Q
    ||||||||||||| || |||||| |  ||| ||||| | | ||||||| ||||||||||| ||||||||||||||| |||||||||| ||||||| ||||    
T  8604486 tcaacatcaactacatcatatagtttcacagctccaaata-tttctcatattccaagtaaagagaaaatacaacacgttatgataaatatcatatccaac 8604388  T
Q  235 acctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaagat 291  Q
    |  |||||||||||||||||||||||| ||| |||||||| |||| |||||||||||    
T  8604387 atataacaattcattcacacatcttcatttagtcatataaggctagtcacgaaagat 8604331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 135 - 274
Target Start/End: Original strand, 33396290 - 33396430
Alignment:
Q  135 tcaacatcaactatataatatagctcaacaactccatacactttctcaca-ttccaagtaag-gagaaaatacaacaccttatgataaacatcatattca 232  Q
    |||||||||||||||| |||||| ||||||||  ||||   ||||||||| ||||||||||  ||||||||||||||||||| |||||||||||||||||    
T  33396290 tcaacatcaactatatcatatagttcaacaacatcatattatttctcacaattccaagtaaatgagaaaatacaacaccttacgataaacatcatattca 33396389  T
Q  233 acacctaacaattcattcacacatcttcaattaatcatataa 274  Q
    ||||||| ||| ||||||||| |||||||  |||||||||||    
T  33396390 acacctagcaa-tcattcacatatcttcatataatcatataa 33396430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 176 - 291
Target Start/End: Original strand, 21194078 - 21194193
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataac 275  Q
    ||||||| || |||||||| ||||||||||||||| |||||||||| ||||||| |||||  || ||||||||||||||||||||| ||| ||||||||     
T  21194078 tttctcatatcccaagtaatgagaaaatacaacactttatgataaatatcatatccaacatatatcaattcattcacacatcttcatttagtcatataaa 21194177  T
Q  276 gctaatcacgaaagat 291  Q
    |||| |||||||||||    
T  21194178 gctagtcacgaaagat 21194193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 131 - 292
Target Start/End: Complemental strand, 40437567 - 40437406
Alignment:
Q  131 ttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaa-ggagaaaatacaacaccttatgataaacatcatat 229  Q
    ||||||||| |||| |||||  ||||| ||||||||| |  ||| ||||||||| ||||||||| |||| |||||||| ||||||||||||||||||| |    
T  40437567 ttaatcaacttcaattatatcctatagttcaacaacttcgcacaatttctcacaatccaagtaaaggaggaaatacaataccttatgataaacatcatgt 40437468  T
Q  230 tcaacacctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaagatt 292  Q
    |||||||||||||||| | ||||| | ||||| |||||||||||| | || |||| |||||||    
T  40437467 tcaacacctaacaatt-actcacataacttcatttaatcatataaagttattcacaaaagatt 40437406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 176 - 291
Target Start/End: Original strand, 27673753 - 27673867
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataac 275  Q
    ||||||| |||||||||||| |||| |||| ||| ||||||||||| ||||||| |||||| ||||||||||||||||||||| || ||| ||||| ||     
T  27673753 tttctcatattccaagtaag-agaacatacgacatcttatgataaatatcatatccaacacataacaattcattcacacatctccatttagtcatacaag 27673851  T
Q  276 gctaatcacgaaagat 291  Q
    |||| |||||||||||    
T  27673852 gctagtcacgaaagat 27673867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 181 - 294
Target Start/End: Original strand, 20193043 - 20193156
Alignment:
Q  181 cacattccaagtaa-ggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgcta 279  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||| | |||||| ||||  | | ||||||| |||||||||||| ||||    
T  20193043 cacattccaagtaaaggagaaaatgcaacaccttatgataaacatcatattcaacgcttaacaa-tcatctaaatatcttcatttaatcatataaagcta 20193141  T
Q  280 atcacgaaagattta 294  Q
    ||||  |||||||||    
T  20193142 atcataaaagattta 20193156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 196 - 271
Target Start/End: Complemental strand, 77176 - 77102
Alignment:
Q  196 gagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcata 271  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||  ||||||||    
T  77176 gagaaaatacaacactttatgataaacatcatattcaacacctaacaa-tcattcacatatcttcatataatcata 77102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 161 - 292
Target Start/End: Original strand, 52400233 - 52400365
Alignment:
Q  161 aacaactccatacactttctcacattccaagtaa-ggag-aaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatct 258  Q
    ||||||||||||||  |||||| | | ||||||| |||| ||||||||||||||||||||||| ||||||||||| |||| |||||| | ||||| ||||    
T  52400233 aacaactccatacaacttctcataatacaagtaaaggaggaaaatacaacaccttatgataaatatcatattcaagacctcacaatt-agtcacatatct 52400331  T
Q  259 tcaattaatcatataacgctaatcacgaaagatt 292  Q
    ||| | ||||||||||  |||||||| |||||||    
T  52400332 tcactcaatcatataaaactaatcacaaaagatt 52400365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 196 - 287
Target Start/End: Original strand, 16655446 - 16655537
Alignment:
Q  196 gagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaa 287  Q
    ||||| |||||||| ||||||||||| ||||||  |||||| |||||||||||||||||||||||| ||| ||||| || |||| |||||||    
T  16655446 gagaacatacaacatcttatgataaatatcatagccaacacataacaattcattcacacatcttcatttagtcatacaaggctagtcacgaa 16655537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 196 - 290
Target Start/End: Complemental strand, 5471629 - 5471535
Alignment:
Q  196 gagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaaga 290  Q
    |||| ||||||||||||||||||||||||||||| ||| || |||||||||||||||||| ||||| |||  ||||  | |||| ||||||||||    
T  5471629 gagataatacaacaccttatgataaacatcatatccaaaacttaacaattcattcacacaccttcatttagacataataggctagtcacgaaaga 5471535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 176 - 287
Target Start/End: Original strand, 17607867 - 17607976
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataac 275  Q
    ||||||| ||||||||||| ||||| |||||||| || |||||||| |||||| ||||||  |||||||||| ||| ||||||||| ||| ||||||||     
T  17607867 tttctcatattccaagtaa-gagaacatacaacatctcatgataaatatcata-tcaacatataacaattcactcatacatcttcatttagtcatataag 17607964  T
Q  276 gctaatcacgaa 287  Q
    |||| |||||||    
T  17607965 gctagtcacgaa 17607976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 131 - 232
Target Start/End: Original strand, 46144671 - 46144774
Alignment:
Q  131 ttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagt-aagga-gaaaatacaacaccttatgataaacatcata 228  Q
    |||||| || |||||||||| |||||| ||||||||||||||||  |||||| | | ||||| ||||| ||| |||||||||||||||||||| ||||||    
T  46144671 ttaatccacttcaactatatcatatagttcaacaactccatacaacttctcataatacaagtaaaggaggaacatacaacaccttatgataaatatcata 46144770  T
Q  229 ttca 232  Q
    ||||    
T  46144771 ttca 46144774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 135 - 291
Target Start/End: Complemental strand, 37235266 - 37235113
Alignment:
Q  135 tcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaac 234  Q
    ||||||||||||| || |||||| |  || |||||| | | ||||||| |||||||||||| |||| ||||| ||  |||||||||| ||||||| ||||    
T  37235266 tcaacatcaactacatcatatagtttcaccactccaaata-tttctcatattccaagtaag-agaacatacagcattttatgataaatatcatat-caac 37235170  T
Q  235 acctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaagat 291  Q
    |   ||||| ||||||||||||||||| ||| |||||||| |||| ||| |||||||    
T  37235169 atacaacaagtcattcacacatcttcatttagtcatataaggctagtcatgaaagat 37235113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 138 - 271
Target Start/End: Original strand, 20821981 - 20822114
Alignment:
Q  138 acatcaactatataatatagctcaacaactccatacactttctcacattccaagtaa-ggagaaaatacaacaccttatgataaacatcatattcaacac 236  Q
    ||||||||| ||| |||||  ||||||||  || ||  ||||||||| ||||| ||| |||||||||||  ||| ||||||||||||| |||||||||||    
T  20821981 acatcaactttatcatataattcaacaacatcacactatttctcacaatccaaataaaggagaaaatacttcacattatgataaacattatattcaacac 20822080  T
Q  237 ctaacaattcattcacacatcttcaattaatcata 271  Q
    ||| ||| |||| |||| |||||||  ||||||||    
T  20822081 ctagcaa-tcatccacatatcttcatataatcata 20822114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 142 - 233
Target Start/End: Complemental strand, 49998602 - 49998509
Alignment:
Q  142 caactatataatatagctcaacaactccatacactttctcacattccaagtaa-ggag-aaaatacaacaccttatgataaacatcatattcaa 233  Q
    ||||||||| |||||| ||||||||| ||||||  |||||| | | ||||||| |||| |||||||||||||||||| |||| |||||||||||    
T  49998602 caactatatcatatagttcaacaactacatacaacttctcataatacaagtaaaggaggaaaatacaacaccttatgttaaatatcatattcaa 49998509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 190 - 289
Target Start/End: Complemental strand, 22144626 - 22144528
Alignment:
Q  190 agtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaag 289  Q
    ||||| |||||||||||||| |||||||| || ||||||  ||||| ||||||||||| |||||||||| || ||| ||| |||| |||| |||| ||||    
T  22144626 agtaaagagaaaatacaacatcttatgatcaatatcataaccaacatctaacaattca-tcacacatctccatttagtcacataaggctagtcacaaaag 22144528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 274
Target Start/End: Complemental strand, 20956234 - 20956137
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataa 274  Q
    |||||||||||| ||||||| |||| |||||||| || |||||||||||||||| | |||  |||  ||||||||| |||  |||| ||| ||||||||    
T  20956234 tttctcacattctaagtaag-agaacatacaacatctcatgataaacatcatatccgacatataatcattcattcatacaatttcacttagtcatataa 20956137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 261
Target Start/End: Complemental strand, 13378028 - 13377944
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttca 261  Q
    ||||||| |||||||||||| |||| |||||||| |  |||||||| ||||||| |  ||  |||||| |||||||||||||||||    
T  13378028 tttctcatattccaagtaag-agaacatacaacatcacatgataaatatcatatccttcatgtaacaaatcattcacacatcttca 13377944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 349
Target Start/End: Original strand, 52987405 - 52987442
Alignment:
Q  312 cccatcttagaagcatcacaatacacaacaaacgattc 349  Q
    |||| |||||| ||||||||||||||||||||||||||    
T  52987405 cccaacttagatgcatcacaatacacaacaaacgattc 52987442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 148; Significance: 7e-78; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 296 - 487
Target Start/End: Original strand, 14541 - 14732
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||| |||||     
T  14541 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggcaaaatcaacaccggagctgaagtcaacctcttc 14640  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||  ||||| ||||||||||||||||||| ||||||||||||||||||    
T  14641 ttcaactcttggaaactcttctcacacttggcatcccaaacataagcctgtcctttccgagtcaactgcgtcaatggcaacgccaacttaga 14732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 148; Significance: 7e-78; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 300 - 487
Target Start/End: Original strand, 23813 - 24000
Alignment:
Q  300 acaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctctttttca 399  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||| ||||||||||||| ||||| ||||    
T  23813 acaccaccaaaacccatcttagaagcatcacattacacaacaaacgattccttcggattcagcaaaatcaacactagagctgaagtcaacctcttcttca 23912  T
Q  400 actcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  23913 actcttggaaactcttctcacacttagcatcccaaacataagcttgtcccttccgagtcaactgcgtcaatggcaacgccaacttaga 24000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 148; Significance: 7e-78; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 296 - 487
Target Start/End: Original strand, 41891 - 42082
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||| |||||     
T  41891 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggcaaaatcaacaccggagctgaagtcaacctcttc 41990  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||  ||||| ||||||||||||||||||| ||||||||||||||||||    
T  41991 ttcaactcttggaaactcttctcacacttggcatcccaaacataagcctgtcctttccgagtcaactgcgtcaatggcaacgccaacttaga 42082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 148; Significance: 7e-78; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 296 - 487
Target Start/End: Complemental strand, 23156153 - 23155962
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||| || |||||     
T  23156153 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggcaaaatcaacacaggagctgaagtaaacctcttc 23156054  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    || ||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||    
T  23156053 ttaaactcttggaaactcttctaacacttagcatcccaaacataagcttgtcctttccgagtcaactgcgtcaatggcaacgccaacttaga 23155962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 296 - 487
Target Start/End: Complemental strand, 21849450 - 21849259
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||  ||||||||||||| |||||     
T  21849450 aagcacaccaccaagacccatcttagaagcatcacaatacaccacaaacgattctttcggattcggcaaaatcaacaccggagctgaagtcaacctcttc 21849351  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    ||||||||||||||||||||||  ||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  21849350 ttcaactcttggaaactcttctcgcacttggcatcccaaacataagtttgtcctttccgagtcaactgcgtcaatggcaacgccaacttaga 21849259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 296 - 484
Target Start/End: Complemental strand, 16876208 - 16876020
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||  ||||||||||||| |||||     
T  16876208 aagcacaccaccaagacccatcttagaagcatcacaatacaccacaaacgattccttcggattcggcaaaatcaacaccggagctgaagtcaacctcttc 16876109  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaactt 484  Q
    ||||||||||||||||||||||  ||||| |||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||    
T  16876108 ttcaactcttggaaactcttctcgcacttggcatcccaaacataagcttgtcctttccgagtcaactgcgtcaatggcaacgccaactt 16876020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 296 - 487
Target Start/End: Original strand, 22435971 - 22436162
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||| | |||     
T  22435971 aagcacaccaccaagacccatcttaaaagcatcgcaatacacaacaaacgattccttcggattcgtcaaaatcaacactggagctgaagtcaaccacttc 22436070  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||||||||||||||| |||||||||||| |||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||    
T  22436071 ttcaactcttggaaactcttctcacacttagcatcacaaacataagcttgtcctttccgagtcaactgcgtcaatggcaacgccaacttaga 22436162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 308 - 487
Target Start/End: Complemental strand, 21195640 - 21195461
Alignment:
Q  308 aagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctctttttcaactcttgg 407  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||| ||||||||||||| ||||| ||||||||||||    
T  21195640 aagacccatcttagaagcatcacaatacacaacaaatgattccttcgaattcggcaaaatcaacactggagctgaagtcaacctcttcttcaactcttgg 21195541  T
Q  408 aaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||| ||||||| |||| ||||||||||||||||||    
T  21195540 aaactcttctcacacttagcatcccaaacataagtttgtcctttccgattcaactgtgtcaatggcaacgccaacttaga 21195461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 72 - 294
Target Start/End: Complemental strand, 22498629 - 22498406
Alignment:
Q  72 catcatcacattgtcatcataatttttaataatcatcaacattaattgatatatata--ctttaatcaacatcaactatataatatagctcaacaactcc 169  Q
    |||||| ||||||||||||||||| | |||| |||||||||| ||||||||||||||  | ||||||||||||||||||||||||||| ||||| |||||    
T  22498629 catcattacattgtcatcataattatcaatattcatcaacatcaattgatatatatatacattaatcaacatcaactatataatatagttcaaccactcc 22498530  T
Q  170 atacactttctcacattccaagta-aggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatc 268  Q
    |||||| |||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||| ||||||| ||||||    
T  22498529 atacac-ttctcatattccaagtataggagaaaatacaacaccttgtgataaacatcatattcaacacctatcaa-tcattcacatatcttcatttaatc 22498432  T
Q  269 atataacgctaatcacgaaagattta 294  Q
    |||||| |||| ||||||||||||||    
T  22498431 atataaagctattcacgaaagattta 22498406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 72 - 294
Target Start/End: Original strand, 33171098 - 33171319
Alignment:
Q  72 catcatcacattgtcatcataatttttaataatcatcaacattaattgatatatatactttaatcaacatcaactatataatatagctcaacaactccat 171  Q
    |||||| ||||||||||||||||| | ||||||||||||||| |||| ||||||| || ||||||||||||||| ||||||||||| || || ||||||     
T  33171098 catcattacattgtcatcataattatcaataatcatcaacatcaattaatatataaacattaatcaacatcaaccatataatatagttccactactccaa 33171197  T
Q  172 acactttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcata 271  Q
    | |||| |||| ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||| ||||     
T  33171198 atactt-ctcatattccaagtaaagagaaaatgcaacaccttatgataaatatcatattcaacacctaacaattcattcacatatcttcatttagtcatg 33171296  T
Q  272 taacgctaatcacgaaagattta 294  Q
     || |||| ||||||||||||||    
T  33171297 caaggctagtcacgaaagattta 33171319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 103 - 294
Target Start/End: Complemental strand, 18042840 - 18042649
Alignment:
Q  103 atcatcaacattaattgatatatatactttaat-caacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaaggagaaa 201  Q
    ||||||||| | ||||||||||||||| ||||| |||||||||||||||||||||| ||||| |||||| |||||| |||  |||||||||   ||||||    
T  18042840 atcatcaacgtcaattgatatatatacattaattcaacatcaactatataatatagttcaaccactccaaacactt-ctcgtattccaagtttagagaaa 18042742  T
Q  202 atacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaagattta 294  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||    
T  18042741 atacaacaccttatgataaatatcatattcaacacctaacaattcattcacatatcttcatttaatcatataaagctagtcacgaaagattta 18042649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 296 - 487
Target Start/End: Original strand, 22316859 - 22317040
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||     
T  22316859 aagcacaccaccaagaaccatcttagaagcatcacaatacacaacaaatgattccttcggattcggcaaaatcaacacttgagctgaagtcaacctcttc 22316958  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||          ||||||||| ||||||||||||||||||||| | |||||| ||||||||||||| ||||| ||||||||||||| ||||    
T  22316959 ttc----------aactcttctcacacttagcatcccaaacatacgcttgtcctttccgagtcaactacgtcaatggcaacgccaacctaga 22317040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 296 - 417
Target Start/End: Original strand, 23901855 - 23901976
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||| ||||||| |||||     
T  23901855 aagcacaccaccaagcctcatcttagaagcatcacaatacacaacaaaagattccttcggattcggcaaaatcaacactggagctcaagtcaacctctta 23901954  T
Q  396 ttcaactcttggaaactcttct 417  Q
    ||||||||||||||||||||||    
T  23901955 ttcaactcttggaaactcttct 23901976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 122 - 274
Target Start/End: Complemental strand, 45560407 - 45560255
Alignment:
Q  122 atatatactttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaa-ggagaaaatacaacaccttatgataa 220  Q
    |||||| | |||||||||||||||||||| |||||| ||||||||||||||||  |||||||| ||||||||| |||||||||||||||| |||||||||    
T  45560407 atatatgcattaatcaacatcaactatatcatatagttcaacaactccatacaacttctcacaatccaagtaaaggagaaaatacaacactttatgataa 45560308  T
Q  221 acatcatattcaacacctaacaattcattcacacatcttcaattaatcatataa 274  Q
    ||||||||||||||||||||||| || |||||| |||||||  |||||||||||    
T  45560307 acatcatattcaacacctaacaa-tcgttcacatatcttcatataatcatataa 45560255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 122 - 274
Target Start/End: Original strand, 25756966 - 25757118
Alignment:
Q  122 atatatactttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaa-ggagaaaatacaacaccttatgataa 220  Q
    |||||| | |||||||||||||||||||| |||||| |||||||||||||||| |||||||||   ||||||| |||||||||||||||| |||||||||    
T  25756966 atatatgcattaatcaacatcaactatatcatatagttcaacaactccatacaatttctcacaagtcaagtaaaggagaaaatacaacacattatgataa 25757065  T
Q  221 acatcatattcaacacctaacaattcattcacacatcttcaattaatcatataa 274  Q
    |||||||||||||||||||| || ||||||||| |||||||  |||||||||||    
T  25757066 acatcatattcaacacctaa-aaatcattcacatatcttcatataatcatataa 25757118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 122 - 274
Target Start/End: Original strand, 25294946 - 25295098
Alignment:
Q  122 atatatactttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagt-aaggagaaaatacaacaccttatgataa 220  Q
    |||||| | |||||||||||||||||||| |||||| |||||||||||||||| |||||||||   ||||| |||||||||||||||||| |||||||||    
T  25294946 atatatgcattaatcaacatcaactatatcatatagttcaacaactccatacaatttctcacaagtcaagtaaaggagaaaatacaacacattatgataa 25295045  T
Q  221 acatcatattcaacacctaacaattcattcacacatcttcaattaatcatataa 274  Q
    |||||||||||||||| ||| || ||||||||| |||||||  |||||||||||    
T  25295046 acatcatattcaacacttaa-aaatcattcacatatcttcatataatcatataa 25295098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 122 - 271
Target Start/End: Original strand, 11543491 - 11543639
Alignment:
Q  122 atatatactttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaaggagaaaatacaacaccttatgataaa 221  Q
    |||||| | |||||||||||||||||||| |||||| |||||||||||||||  ||||||||| | ||||| ||||||| ||||||||  ||||||||||    
T  11543491 atatatgcattaatcaacatcaactatatcatatagttcaacaactccatactatttctcacaattcaagtgaggagaagatacaacaatttatgataaa 11543590  T
Q  222 catcatattcaacacctaacaattcattcacacatcttcaattaatcata 271  Q
    |||||||||||||||||| ||| ||||||||| | ||||| |||||||||    
T  11543591 catcatattcaacacctagcaa-tcattcacataccttcatttaatcata 11543639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 296 - 487
Target Start/End: Complemental strand, 20651446 - 20651277
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    ||||||||||||||| ||||||||||||||||||||||||            |||||||||||||| |||||||||||| |||||||||||||  ||||     
T  20651446 aagcacaccaccaagccccatcttagaagcatcacaatac------------tccttcggattcggcaaaatcaacactggagctgaagtcaacatcttc 20651359  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    ||||||||||          || ||||||||||||||||||||||| |||||| ||| ||||||||||||||| ||||||||||||||||||    
T  20651358 ttcaactctt----------ctcacacttagcatcccaaacataagcttgtcctttctgagtcaactgcgtcaatggcaacgccaacttaga 20651277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 132 - 294
Target Start/End: Original strand, 24238581 - 24238743
Alignment:
Q  132 taatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagt-aaggagaaaatacaacaccttatgataaacatcatatt 230  Q
    ||||||||||||||||||||||||| |||||||||| |||| ||||||||| | ||||||| ||| || ||||||||||| ||| ||||||| || ||||    
T  24238581 taatcaacatcaactatataatataactcaacaacttcatatactttctcataatccaagtaaagaagtaaatacaacacgttacgataaacctcgtatt 24238680  T
Q  231 caacacctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaagattta 294  Q
    ||||||| || || ||||||||  ||||||| ||||||||||||  ||| ||||||||||||||    
T  24238681 caacaccgaagaa-tcattcacttatcttcatttaatcatataaatctattcacgaaagattta 24238743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 122 - 239
Target Start/End: Original strand, 22312646 - 22312763
Alignment:
Q  122 atatatactttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaaggagaaaatacaacaccttatgataaa 221  Q
    |||||| | |||||||||||||||||||| |||||| |||||||||||||||  ||||||||| | ||||| ||||||| ||||||||  ||||||||||    
T  22312646 atatatgcattaatcaacatcaactatatcatatagttcaacaactccatactatttctcacaattcaagtgaggagaagatacaacaatttatgataaa 22312745  T
Q  222 catcatattcaacaccta 239  Q
    ||||||||||||||||||    
T  22312746 catcatattcaacaccta 22312763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 135 - 291
Target Start/End: Complemental strand, 37654931 - 37654776
Alignment:
Q  135 tcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaac 234  Q
    ||||||||||||| || |||||| |  || |||||| | | ||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  37654931 tcaacatcaactacatcatatagtttcaccactccaaata-tttctcatattccaagtaaagagaaaatacaacaccttatgataaatatcatattcaac 37654833  T
Q  235 acctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaagat 291  Q
    |   |||||| ||||||||| || ||| ||| |||||||| |||| |||||||||||    
T  37654832 atagaacaatccattcacacgtcatcatttagtcatataaggctagtcacgaaagat 37654776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 131 - 292
Target Start/End: Original strand, 7469149 - 7469311
Alignment:
Q  131 ttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaa-ggag-aaaatacaacaccttatgataaacatcata 228  Q
    ||||||| | |||||||||| |||||| ||||||||||||||||  |||||| | | ||||||| |||| ||||||||||||||||||||||||||||||    
T  7469149 ttaatcagcttcaactatatcatatagttcaacaactccatacaacttctcataatacaagtaaaggaggaaaatacaacaccttatgataaacatcata 7469248  T
Q  229 ttcaacacctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaagatt 292  Q
    ||||| ||||  ||||| | ||||| ||||||| | |||||||||| |||| |||| |||||||    
T  7469249 ttcaagacctcgcaatt-actcacatatcttcattcaatcatataaagctattcacaaaagatt 7469311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 176 - 292
Target Start/End: Original strand, 17500959 - 17501074
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataac 275  Q
    |||| |||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |  |||| ||||||||||||     
T  17500959 tttcccacattccaagtaaagatgaaatacaacaccttatgataaacatcatattcaacacctaacaa-tcattcacataatttcatttaatcatataaa 17501057  T
Q  276 gctaatcacgaaagatt 292  Q
    ||||  ||| |||||||    
T  17501058 gctatccacaaaagatt 17501074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 133 - 272
Target Start/End: Complemental strand, 19332795 - 19332656
Alignment:
Q  133 aatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagt-aaggagaaaatacaacaccttatgataaacatcatattc 231  Q
    |||||||||||||||||| |||||| |||||||||||||| |||| |||||| ||||||| ||| |||||||||  ||| ||||||||||||||||||||    
T  19332795 aatcaacatcaactatatcatatagttcaacaactccatatacttcctcacaatccaagtaaagaagaaaatacttcacattatgataaacatcatattc 19332696  T
Q  232 aacacctaacaattcattcacacatcttcaattaatcatat 272  Q
    | ||||| | || |||| |||| |||||||  |||||||||    
T  19332695 atcacct-agaaatcatccacatatcttcatataatcatat 19332656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 176 - 294
Target Start/End: Original strand, 22886797 - 22886915
Alignment:
Q  176 tttctcacattccaagtaa-ggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataa 274  Q
    |||| ||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||| | ||||| ||| ||||||||    
T  22886797 tttcccacattccatgtaaaggagaagatacaacaccttatgataaacatcatattcaacacttaacaa-tcattcacatagcttcatttagtcatataa 22886895  T
Q  275 cgctaatcacgaaagattta 294  Q
     |||| |||| |||||||||    
T  22886896 agctattcacaaaagattta 22886915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 140 - 233
Target Start/End: Complemental strand, 3845317 - 3845223
Alignment:
Q  140 atcaactatataatatagctcaacaactccatacactttctcacattccaagt-aaggagaaaatacaacaccttatgataaacatcatattcaa 233  Q
    ||||||||||| |||||| |||||||||||||||| ||||||||| ||||||| |||||||||||||| ||| ||| ||||||||||||||||||    
T  3845317 atcaactatatcatatagttcaacaactccatacaatttctcacaatccaagtaaaggagaaaatacatcacattaggataaacatcatattcaa 3845223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 181 - 289
Target Start/End: Original strand, 16001039 - 16001147
Alignment:
Q  181 cacattccaagt-aaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgcta 279  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||  |||||||| | ||||||| ||||||| ||||||| |||| ||||    
T  16001039 cacattccaagtgaaggagaaaatacaacaccctatgataaacatcatattcaatgcctaacaact-attcacatatcttcacttaatcaaataaagcta 16001137  T
Q  280 atcacgaaag 289  Q
    ||||| ||||    
T  16001138 atcacaaaag 16001147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 176 - 292
Target Start/End: Complemental strand, 33612315 - 33612200
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataac 275  Q
    ||||||| ||| ||||||| ||||||| |||||| |||||||| || ||||||| ||||| | |||||||||| |||||||||||| ||| ||| ||||     
T  33612315 tttctcatattacaagtaacgagaaaacacaacatcttatgatcaatatcatatccaacatccaacaattcat-cacacatcttcatttagtcacataag 33612217  T
Q  276 gctaatcacgaaagatt 292  Q
    |||| ||||||||||||    
T  33612216 gctagtcacgaaagatt 33612200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 142 - 292
Target Start/End: Complemental strand, 38636949 - 38636798
Alignment:
Q  142 caactatataatatagctcaacaactccatacactttctcacattccaagtaa-ggag-aaaatacaacaccttatgataaacatcatattcaacaccta 239  Q
    ||||||||| |||||| ||||||||| |||| |  |||||| | |  |||||| |||| ||||||||||||||||||||||| ||||||||||| ||||     
T  38636949 caactatatcatatagttcaacaacttcatataacttctcataatataagtaaaggaggaaaatacaacaccttatgataaatatcatattcaatacctc 38636850  T
Q  240 acaattcattcacacatcttcaattaatcatataacgctaatcacgaaagatt 292  Q
    |||||| | ||||| ||||||| | ||||||||||  |||||||| |||||||    
T  38636849 acaatt-actcacatatcttcattcaatcatataaaactaatcacaaaagatt 38636798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 177 - 291
Target Start/End: Original strand, 26010374 - 26010485
Alignment:
Q  177 ttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacg 276  Q
    |||||| ||||| |||||| |||| |||||||| ||||||||||| ||||||| |||||  ||||||||||||||||||||| |||||| |||||||| |    
T  26010374 ttctcatattcccagtaag-agaacatacaacatcttatgataaa-atcatat-caacatataacaattcattcacacatctccaattagtcatataagg 26010470  T
Q  277 ctaatcacgaaagat 291  Q
    ||| | |||||||||    
T  26010471 ctagtaacgaaagat 26010485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 176 - 288
Target Start/End: Original strand, 15932262 - 15932372
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataac 275  Q
    ||||||| || ||||||||| |||| |||||||| ||||||||||| ||||||| ||| |  |||||||||||||||||||||||  ||| ||||||||     
T  15932262 tttctcatatgccaagtaag-agaacatacaacatcttatgataaatatcatat-caatatataacaattcattcacacatcttcgtttagtcatataag 15932359  T
Q  276 gctaatcacgaaa 288  Q
    |||| ||||||||    
T  15932360 gctagtcacgaaa 15932372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 184 - 291
Target Start/End: Original strand, 23836134 - 23836239
Alignment:
Q  184 attccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgctaatca 283  Q
    |||||||||||| |||| ||| |||| ||||||||||| ||||||| |||||  |||||| ||||||||||||||||| ||| |||||||  |||| |||    
T  23836134 attccaagtaag-agaacatataacatcttatgataaatatcatat-caacatataacaagtcattcacacatcttcatttagtcatatacggctagtca 23836231  T
Q  284 cgaaagat 291  Q
    ||||||||    
T  23836232 cgaaagat 23836239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 274
Target Start/End: Original strand, 23148810 - 23148906
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataa 274  Q
    ||||||| |||||||||||| ||||||||||||| || |||||||| ||||||| ||||| ||||||||||| ||||||||| ||| ||| ||| ||||    
T  23148810 tttctcatattccaagtaag-agaaaatacaacatctcatgataaatatcatatacaacatctaacaattca-tcacacatcatcatttagtcacataa 23148906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 272
Target Start/End: Complemental strand, 20177101 - 20177023
Alignment:
Q  193 aaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatat 272  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| ||  || ||||||||| |||||||  |||||||||    
T  20177101 aaggagaaaatacaacaccttataataaacatcacattcaacacatagtaa-tcattcacatatcttcatataatcatat 20177023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 272
Target Start/End: Complemental strand, 20221828 - 20221750
Alignment:
Q  193 aaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatat 272  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| ||  || ||||||||| |||||||  |||||||||    
T  20221828 aaggagaaaatacaacaccttataataaacatcacattcaacacatagtaa-tcattcacatatcttcatataatcatat 20221750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 312 - 447
Target Start/End: Complemental strand, 24631763 - 24631628
Alignment:
Q  312 cccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctctttttcaactcttggaaac 411  Q
    ||||||||| | |||||||||||||| ||||| || || |||| |||||| |||||||| ||||| | ||| ||||| ||||| ||||  ||||| ||||    
T  24631763 cccatcttaaatgcatcacaatacaccacaaaagactcattcgcattcggcaaaatcaaaacttgcgttgatgtcaacctcttcttcatatcttgaaaac 24631664  T
Q  412 tcttcttacacttagcatcccaaacataagtttgtc 447  Q
      |||| ||||| |||| |||||||| | |||||||    
T  24631663 ctttctcacactgagcaacccaaacaaatgtttgtc 24631628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 25609032 - 25609111
Alignment:
Q  131 ttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagt-aaggagaaaatacaaca 209  Q
    |||||| ||||||||||||| |||||| ||||||||  |||||  ||||||||| ||||||| |||||||||||||||||    
T  25609032 ttaatccacatcaactatatcatatagttcaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaaca 25609111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 198 - 245
Target Start/End: Original strand, 25609190 - 25609237
Alignment:
Q  198 gaaaatacaacaccttatgataaacatcatattcaacacctaacaatt 245  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  25609190 gaaaatacaacgccttatgataaacatcatattcaacacttaacaatt 25609237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 179 - 289
Target Start/End: Complemental strand, 23227267 - 23227158
Alignment:
Q  179 ctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgct 278  Q
    |||| ||| ||| ||| ||||||| |||||  |||||||| || |||| || ||||| |||||||||||| |||||||||||| ||||||| |||| |||    
T  23227267 ctcatattgcaaataacgagaaaacacaacttcttatgatcaatatcacatccaacatctaacaattcat-cacacatcttcatttaatcacataaggct 23227169  T
Q  279 aatcacgaaag 289  Q
    | |||||||||    
T  23227168 agtcacgaaag 23227158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 23116147 - 23116092
Alignment:
Q  72 catcatcacattgtcatcataatttttaataatcatcaacattaattgatatatat 127  Q
    |||||||||||| ||||||||||| | ||||||||||||||| ||| |||||||||    
T  23116147 catcatcacattatcatcataattatcaataatcatcaacatcaatcgatatatat 23116092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 272
Target Start/End: Complemental strand, 18119194 - 18119081
Alignment:
Q  159 tcaacaactccatacactttctcacattccaagtaa-ggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatc 257  Q
    ||||||||| |||||| ||||||| | | ||||||| |||||||||  | ||   ||||||||||||||||||||||||||| |||  |||||||| |||    
T  18119194 tcaacaacttcatacaatttctcaaaattcaagtaaaggagaaaatctaccatgctatgataaacatcatattcaacacctagcaa-acattcacatatc 18119096  T
Q  258 ttcaattaatcatat 272  Q
    ||||  |||||||||    
T  18119095 ttcatataatcatat 18119081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 148; Significance: 7e-78; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 296 - 487
Target Start/End: Original strand, 7825491 - 7825682
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||| |||||     
T  7825491 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggcaaaatcaacaccggagctgaagtcaacctcttc 7825590  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||  ||||| ||||||||||||||||||| ||||||||||||||||||    
T  7825591 ttcaactcttggaaactcttctcacacttggcatcccaaacataagcctgtcctttccgagtcaactgcgtcaatggcaacgccaacttaga 7825682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 72 - 294
Target Start/End: Original strand, 13617660 - 13617882
Alignment:
Q  72 catcatcacattgtcatcataatttttaataatcatcaacattaattgatatatatactttaatcaacatcaactatataatatagctcaacaactccat 171  Q
    |||| ||||||||||||||||||| | ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  13617660 catcttcacattgtcatcataattatcaataatcatcaacatcaattgatatatatacattaatcaacatcaactatataatatagctcaacaactccat 13617759  T
Q  172 acactttctcacattccaagt-aaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcat 270  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||| | ||||| | |||||||     
T  13617760 acactttctcacattccaagtaaaggagaaaatacaacaccttataataaacatcatattcagcacctaacaa-tcattcaaatatcttaatttaatcaa 13617858  T
Q  271 ataacgctaatcacgaaagattta 294  Q
    |||| | || ||||||||||||||    
T  13617859 ataaagttattcacgaaagattta 13617882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 296 - 487
Target Start/End: Original strand, 15365530 - 15365721
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||     
T  15365530 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggcaaaatcaacactggagctgaagtcaacctcttc 15365629  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    ||||| |||||||||||||| | ||||||||||||||||||||||| |||||| || |||||||||||||||| ||||||||||||||||||    
T  15365630 ttcaattcttggaaactcttttcacacttagcatcccaaacataagcttgtcctttacgagtcaactgcgtcaatggcaacgccaacttaga 15365721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 296 - 487
Target Start/End: Complemental strand, 27106453 - 27106262
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||| |||||     
T  27106453 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggcaaaatcaacaccggagctgaagtcaacctcttc 27106354  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||  ||||| ||||||||||||||||||| ||||||||||||||||||    
T  27106353 ttcaactcttggaaactcttctcacacttggcatcccaaacataagcctgtcctttccgagtcaactgcgtcaatggcaacgccaacttaga 27106262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 296 - 487
Target Start/End: Original strand, 27171872 - 27172063
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||| |||||     
T  27171872 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggcaaaatcaacaccggagctgaagtcaacctcttc 27171971  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||  ||||| ||||||||||||||||||| ||||||||||||||||||    
T  27171972 ttcaactcttggaaactcttctcacacttggcatcccaaacataagcctgtcctttccgagtcaactgcgtcaatggcaacgccaacttaga 27172063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 296 - 487
Target Start/End: Original strand, 14937937 - 14938128
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||     
T  14937937 aagcacaccaccaagacccatcttagaagcatcacaatatacaacaaacgattccttcggattcggcaaaatcaacactggagctgaagtcaacctcttc 14938036  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    ||||| |||||||||||||| | ||||||||||||||||||||||| |||||| || |||||||||||||||| ||||||||||||||||||    
T  14938037 ttcaattcttggaaactcttttcacacttagcatcccaaacataagcttgtcctttacgagtcaactgcgtcaatggcaacgccaacttaga 14938128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 296 - 487
Target Start/End: Original strand, 4441519 - 4441710
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||  |||||||||||| ||||||||||||| |||||     
T  4441519 aagcacatcaccaagacccatcttagaagcatcacaatacacaacaaatgatttcttcggattcgacaaaatcaacactggagctgaagtcaacctcttc 4441618  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||| || ||||||||||||||||||    
T  4441619 ttcaactcttggaaactcttctcacacttagcatcccaaacataagcttgtcctttccgagtcaactgcgccaatggcaacgccaacttaga 4441710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 296 - 474
Target Start/End: Original strand, 13457622 - 13457800
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||| |||||||||| || |||||     
T  13457622 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaatgattccttcagattcagaaaaatcaacactagagctgaagtaaacctcttc 13457721  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggca 474  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  13457722 ttcaactcttggaaactcttctcacacttagcatcccaaacataagcttgtcccttccgagtcaactgcgtcaatggca 13457800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 296 - 487
Target Start/End: Original strand, 17925242 - 17925432
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||| |||||||| ||||| ||||||| |||||     
T  17925242 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaaagattcctttggattgggaaaa-tcaacactggagctaaagtcaacctcttc 17925340  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||||||||||||||| |||||||||||||||||| |||| |||||| ||||||||||||||||||| ||||||||||||||||||    
T  17925341 ttcaactcttggaaactcttctcacacttagcatcccaaacgtaagcttgtcctttccgagtcaactgcgtcaatggcaacgccaacttaga 17925432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 72 - 294
Target Start/End: Complemental strand, 9322392 - 9322171
Alignment:
Q  72 catcatcacattgtcatcataatttttaataatcatcaacattaattgatatatatactttaatcaacatcaactatataatatagctcaacaactccat 171  Q
    |||||||||||||| ||||||||| | ||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||| || || ||||||     
T  9322392 catcatcacattgttatcataattatcaataatcatcaacatcaattgatatataaactttaatcaacatcaaccatataatatagttccaccactccaa 9322293  T
Q  172 acactttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcata 271  Q
    | |||| |||| ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||| |||||    
T  9322292 atactt-ctcatattccaagtaaagagaaaatgcaacaccttatgataaatatcatattcaacacctaacaattcattcacatatcttcatttagtcata 9322194  T
Q  272 taacgctaatcacgaaagattta 294  Q
    ||| |||| | ||||||||||||    
T  9322193 taaggctagttacgaaagattta 9322171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 298 - 487
Target Start/End: Complemental strand, 21673209 - 21673020
Alignment:
Q  298 gcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttttt 397  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||| ||||||||||||||||||||||||||||| |||||||||| || | ||| ||    
T  21673209 gcacaccactaagacccatcttagaagcattattatacacaacaaacaattccttcggattcggaaaaatcaacactggagctgaagtgaaccccttctt 21673110  T
Q  398 caactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||||||||||||| |||| || |||| |||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||    
T  21673109 caactcttggaaactcttctcacacctaacatcacaaacataagcttgtcctttccgagtcaactgcgtcaatggcaacgccaacttaga 21673020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 296 - 486
Target Start/End: Original strand, 13354740 - 13354930
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||  |||||||||| || || |||||||||||| ||||||||||||| |||||     
T  13354740 aagcacaccgccaagccccatcttagaagcatcacaatacacaacaaaacattccttcggctttggcaaaatcaacactggagctgaagtcaacctcttc 13354839  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttag 486  Q
    | |||||||||||||||||||||||| ||||||||||||||||||| || ||| ||||||||||||||||||| ||||||||  |||||||    
T  13354840 tccaactcttggaaactcttcttacatttagcatcccaaacataagcttatcctttccgagtcaactgcgtcaatggcaacgtgaacttag 13354930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 135 - 271
Target Start/End: Original strand, 16382538 - 16382674
Alignment:
Q  135 tcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaa-ggagaaaatacaacaccttatgataaacatcatattcaa 233  Q
    |||||||||||||||| |||||| |||||||||||||| ||||||||| | ||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  16382538 tcaacatcaactatatcatatagttcaacaactccatatactttctcataatccaagtaaaggagaaaatacaacaccttataataaacatcatattcaa 16382637  T
Q  234 cacctaacaattcattcacacatcttcaattaatcata 271  Q
    |||||||||| ||||||||| |||||||  ||||||||    
T  16382638 cacctaacaa-tcattcacatatcttcatataatcata 16382674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 309 - 491
Target Start/End: Original strand, 23649461 - 23649643
Alignment:
Q  309 agacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctctttttcaactcttgga 408  Q
    |||||||||||| ||||||||| |||||||||||| ||||||||||||||||  |||||||||||| | |||||  |||| ||||| |||||||||||||    
T  23649461 agacccatcttaaaagcatcactatacacaacaaatgattccttcggattcgtcaaaatcaacactagcgctgacatcaacctcttcttcaactcttgga 23649560  T
Q  409 aactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttagaaaat 491  Q
    ||||||  | |||||||| |||||||||| | |||||||| ||| ||||||||||| |||  || || ||||||||| |||||    
T  23649561 aactctcttcacacttagtatcccaaacaaacgtttgtcctttctgagtcaactgcatcaacggtaaagccaacttaaaaaat 23649643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 308 - 439
Target Start/End: Complemental strand, 15717570 - 15717439
Alignment:
Q  308 aagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctctttttcaactcttgg 407  Q
    ||||||||||||||| |||||||||||||| | |||||||||||||| |||||  ||||||| ||||   |||||||| || ||||| ||||||||||||    
T  15717570 aagacccatcttagatgcatcacaatacacgaaaaacgattccttcgaattcgacaaaatcagcactgacgctgaagttaacctcttcttcaactcttgg 15717471  T
Q  408 aaactcttcttacacttagcatcccaaacata 439  Q
    |||||||||| |||||||||||||||||||||    
T  15717470 aaactcttctcacacttagcatcccaaacata 15717439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 122 - 239
Target Start/End: Complemental strand, 21676147 - 21676029
Alignment:
Q  122 atatatactttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaa-ggagaaaatacaacaccttatgataa 220  Q
    |||||| | ||| |||||||||||||||| |||||| |||||||||||||||| ||||||||| | ||||||| |||||||||||||||| |||||||||    
T  21676147 atatatgcattattcaacatcaactatatcatatagttcaacaactccatacaatttctcacaattcaagtaaaggagaaaatacaacacattatgataa 21676048  T
Q  221 acatcatattcaacaccta 239  Q
    |||||||||||||||||||    
T  21676047 acatcatattcaacaccta 21676029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 311 - 457
Target Start/End: Complemental strand, 17143926 - 17143780
Alignment:
Q  311 acccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctctttttcaactcttggaaa 410  Q
    |||||||||||||||||||||||||||||||||   |||||| ||||| ||  ||||||||||| | ||||||||||| ||||| ||||||||||| |||    
T  17143926 acccatcttagaagcatcacaatacacaacaaaaatttccttaggatttggtcaaatcaacactggcgctgaagtcaacctcttcttcaactcttgaaaa 17143827  T
Q  411 ctcttcttacacttagcatcccaaacataagtttgtcccttccgagt 457  Q
    ||||  | |||||||| |||||||||| | | |||||| ||||||||    
T  17143826 ctctcttcacacttagtatcccaaacaaacgcttgtcctttccgagt 17143780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 176 - 294
Target Start/End: Complemental strand, 20584127 - 20584010
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataac 275  Q
    ||||||| ||| |||||||| ||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||  ||||||| ||| ||||||||     
T  20584127 tttctcatatttcaagtaag-agaaaatacaacaccctatgataaacatcatatccaacacttaacaattcattcacgtatcttcatttagtcatataaa 20584029  T
Q  276 gctaatcacgaaagattta 294  Q
    |||| ||||||||||||||    
T  20584028 gctagtcacgaaagattta 20584010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 122 - 294
Target Start/End: Original strand, 4483705 - 4483877
Alignment:
Q  122 atatatactttaatcaacatcaactatataatatagctcaacaactccatacactttctcac-attccaagtaaggagaaaatacaacaccttatgataa 220  Q
    |||||| | |||||||||||||||||||| |||||| |||||||||||||||| |||||||| |||| ||  |||| ||||||||||||  |||||||||    
T  4483705 atatatgcattaatcaacatcaactatatcatatagttcaacaactccatacaatttctcacaattcaaataaaggggaaaatacaacatattatgataa 4483804  T
Q  221 acatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaagattta 294  Q
    |||||||||||||||| |   ||   ||| ||| ||||||| ||| |||||||| |||| ||||||||||||||    
T  4483805 acatcatattcaacacat-gtaaagaatttacatatcttcatttagtcatataaagctagtcacgaaagattta 4483877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 122 - 236
Target Start/End: Original strand, 28719432 - 28719547
Alignment:
Q  122 atatatactttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagt-aaggagaaaatacaacaccttatgataa 220  Q
    |||||| | |||||||||||||||| ||| |||||| |||||||||||||||| ||||||| | | ||||| || ||||||||||||||| |||||||||    
T  28719432 atatatgcattaatcaacatcaactctatcatatagttcaacaactccatacaatttctcaaaattcaagtaaaagagaaaatacaacacattatgataa 28719531  T
Q  221 acatcatattcaacac 236  Q
    ||||||||||||||||    
T  28719532 acatcatattcaacac 28719547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 131 - 261
Target Start/End: Complemental strand, 21539419 - 21539288
Alignment:
Q  131 ttaatcaacatcaactatataatatagctcaacaactccatacactttctcac-attccaagtaaggagaaaatacaacaccttatgat-aaacatcata 228  Q
    |||||||||||||||||||| |||||| |||||||||||||||| |||||||| | ||||||||||||||||||||| ||| | ||||| ||| ||||||    
T  21539419 ttaatcaacatcaactatatcatatagttcaacaactccatacaatttctcacaaatccaagtaaggagaaaatacatcacatcatgataaaatatcata 21539320  T
Q  229 ttcaacacctaacaattcattcacacatcttca 261  Q
    ||||| | ||| ||| ||||||||| |||||||    
T  21539319 ttcaatatctagcaa-tcattcacatatcttca 21539288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 131 - 272
Target Start/End: Complemental strand, 39292963 - 39292823
Alignment:
Q  131 ttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaa-ggagaaaatacaacaccttatgataaacatcatat 229  Q
    ||||||||||| ||||| || |||| | |||||||||||||||| ||||||||| | || |||| ||||| |||||||||| ||||||||||||||||||    
T  39292963 ttaatcaacat-aactagatcatatggttcaacaactccatacaatttctcacaatacacgtaaaggagagaatacaacacattatgataaacatcatat 39292865  T
Q  230 tcaacacctaacaattcattcacacatcttcaattaatcatat 272  Q
    ||||||||| | || ||||||||| |||||||  |||||||||    
T  39292864 tcaacacct-agaaatcattcacatatcttcatataatcatat 39292823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 122 - 232
Target Start/End: Complemental strand, 8564815 - 8564704
Alignment:
Q  122 atatatactttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagt-aaggagaaaatacaacaccttatgataa 220  Q
    |||||| | |||||||||||||||||||| |||||| |||||||||||||||  ||||||||| | ||||| |||||||| |||||||||   |||||||    
T  8564815 atatatgcattaatcaacatcaactatatcatatagttcaacaactccatacgatttctcacaattcaagtaaaggagaacatacaacacacaatgataa 8564716  T
Q  221 acatcatattca 232  Q
    ||||||||||||    
T  8564715 acatcatattca 8564704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 176 - 291
Target Start/End: Original strand, 9610181 - 9610294
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataac 275  Q
    |||||||||||||||||||| |||| |||||||| | ||||||||| ||||||| |||||  |||||||||||||||||||||||| ||| ||||||||     
T  9610181 tttctcacattccaagtaag-agaacatacaacatcatatgataaatatcatat-caacatataacaattcattcacacatcttcatttagtcatataag 9610278  T
Q  276 gctaatcacgaaagat 291  Q
    |||| ||| |||||||    
T  9610279 gctagtcaagaaagat 9610294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 176 - 291
Target Start/End: Original strand, 9837753 - 9837866
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataac 275  Q
    |||||||||||||||||||| |||| |||||||| | ||||||||| ||||||| |||||  |||||||||||||||||||||||| ||| ||||||||     
T  9837753 tttctcacattccaagtaag-agaacatacaacatcatatgataaatatcatat-caacatataacaattcattcacacatcttcatttagtcatataag 9837850  T
Q  276 gctaatcacgaaagat 291  Q
    |||| ||| |||||||    
T  9837851 gctagtcaagaaagat 9837866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 143 - 272
Target Start/End: Complemental strand, 15979273 - 15979144
Alignment:
Q  143 aactatataatatagctcaacaactccatacactttctcacattccaagtaagg-agaaaatacaacaccttatgataaacatcatattcaacacctaac 241  Q
    |||||||| |||||| ||||||||| |||||| ||||||||| ||||||||| | |||||||||| ||| ||| ||||||||| |||||||||||||||     
T  15979273 aactatatcatatagttcaacaacttcatacaatttctcacaatccaagtaaagtagaaaatacatcacattaggataaacataatattcaacacctaa- 15979175  T
Q  242 aattcattcacacatcttcaattaatcatat 272  Q
    || ||||||| | |||||||  |||||||||    
T  15979174 aaatcattcatatatcttcatataatcatat 15979144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 181 - 289
Target Start/End: Complemental strand, 14276190 - 14276083
Alignment:
Q  181 cacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgctaa 280  Q
    |||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||| ||| ||||| ||| | ||||| ||||||| |||| ||||     
T  14276190 cacattccaagtaaagatgaaatacaacaccttatgataaacatcatattcaacacctatcaa-tcattaacataacttcatttaatcaaataaagctag 14276092  T
Q  281 tcacgaaag 289  Q
    |||| ||||    
T  14276091 tcacaaaag 14276083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 131 - 291
Target Start/End: Original strand, 48354236 - 48354393
Alignment:
Q  131 ttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatatt 230  Q
    ||||||||| ||||||| || |||||| |  || |||||| | | ||||||| |||||||||||| |||| |||||||| ||||||||||  |||||||     
T  48354236 ttaatcaacttcaactacatcatatagtttcaccactccaaata-tttctcatattccaagtaag-agaacatacaacatcttatgataattatcatat- 48354332  T
Q  231 caacacctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaagat 291  Q
    |||||  |||||||||||||||||||||||| ||| ||||||||  ||| |||||||||||    
T  48354333 caacatataacaattcattcacacatcttcatttagtcatataagcctagtcacgaaagat 48354393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 176 - 291
Target Start/End: Complemental strand, 9057895 - 9057782
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataac 275  Q
    ||||||| |||||||||||| |||| |||||||| ||||||||||  ||||||| |||||  ||||||||||||||||||| |||| ||| ||||||||     
T  9057895 tttctcatattccaagtaag-agaacatacaacatcttatgataagtatcatat-caacatataacaattcattcacacattttcatttagtcatataag 9057798  T
Q  276 gctaatcacgaaagat 291  Q
    |||| |||||||||||    
T  9057797 gctagtcacgaaagat 9057782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 292
Target Start/End: Original strand, 14939684 - 14939836
Alignment:
Q  141 tcaactatataatatagctcaacaactccatacactttctcacattccaagtaa-ggag-aaaatacaacaccttatgataaacatcatattcaacacct 238  Q
    |||||||||| || ||| ||||||||| |||| |  |||||| | | ||||||| |||| ||||||||||||||||||||||| ||||||||||| ||||    
T  14939684 tcaactatatcatttagttcaacaacttcatataacttctcataatacaagtaaaggaggaaaatacaacaccttatgataaatatcatattcaagacct 14939783  T
Q  239 aacaattcattcacacatcttcaattaatcatataacgctaatcacgaaagatt 292  Q
     |||||| | ||||| ||||||| | ||||||||||  |||||||| |||||||    
T  14939784 cacaatt-actcacatatcttcattcaatcatataaaactaatcacaaaagatt 14939836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 292
Target Start/End: Original strand, 15367277 - 15367429
Alignment:
Q  141 tcaactatataatatagctcaacaactccatacactttctcacattccaagtaa-ggag-aaaatacaacaccttatgataaacatcatattcaacacct 238  Q
    |||||||||| || ||| ||||||||| |||| |  |||||| | | ||||||| |||| ||||||||||||||||||||||| ||||||||||| ||||    
T  15367277 tcaactatatcatttagttcaacaacttcatataacttctcataatacaagtaaaggaggaaaatacaacaccttatgataaatatcatattcaagacct 15367376  T
Q  239 aacaattcattcacacatcttcaattaatcatataacgctaatcacgaaagatt 292  Q
     |||||| | ||||| ||||||| | ||||||||||  |||||||| |||||||    
T  15367377 cacaatt-actcacatatcttcattcaatcatataaaactaatcacaaaagatt 15367429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 176 - 293
Target Start/End: Complemental strand, 18080857 - 18080741
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataac 275  Q
    |||| |||||||||||||| |||||||||||| || ||||||| |||||||||| |||  |||||||| ||||||||| |||||||  |||||||||||     
T  18080857 tttcccacattccaagtaaagagaaaatacaatacgttatgatgaacatcatatccaatgcctaacaa-tcattcacatatcttcacataatcatataaa 18080759  T
Q  276 gctaatcacgaaagattt 293  Q
    ||||  ||| ||||||||    
T  18080758 gctatccacaaaagattt 18080741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 181 - 271
Target Start/End: Original strand, 9643284 - 9643374
Alignment:
Q  181 cacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcata 271  Q
    |||||||||||||| ||  ||||||||||||||||||| |||||||||| ||||| ||||||| ||| ||||| | ||||| |||||||||    
T  9643284 cacattccaagtaaagatgaaatacaacaccttatgatgaacatcatatccaacatctaacaagtcactcacataacttcatttaatcata 9643374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 167 - 272
Target Start/End: Complemental strand, 3193332 - 3193227
Alignment:
Q  167 tccatacactttctcacattccaagtaa-ggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaatta 265  Q
    ||||||||  |||||||| | ||||||| ||||||||||| |||  |||||||||||||||||||||| ||||| ||| ||||||||| |||||||  ||    
T  3193332 tccatacaagttctcacaattcaagtaaaggagaaaatacgacaaattatgataaacatcatattcaatacctagcaa-tcattcacatatcttcatata 3193234  T
Q  266 atcatat 272  Q
    |||||||    
T  3193233 atcatat 3193227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 291
Target Start/End: Complemental strand, 10862101 - 10861987
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataac 275  Q
    |||||||||||| ||||||| | || |||||||| || |||| ||| ||||||||||| |  |||| ||||||||||||||||||| ||| ||||||||     
T  10862101 tttctcacattctaagtaag-ataacatacaacatctcatgacaaatatcatattcaaaatataaccattcattcacacatcttcacttagtcatataag 10862003  T
Q  276 gctaatcacgaaagat 291  Q
    | || |||||| ||||    
T  10862002 gatagtcacgatagat 10861987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 196 - 291
Target Start/End: Complemental strand, 16921158 - 16921064
Alignment:
Q  196 gagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaagat 291  Q
    ||||| |||||||| |||| |||||| ||||||| |||||   ||||||||||||||||||||||| ||| |||||||| || | |||||||||||    
T  16921158 gagaacatacaacatcttaagataaatatcatat-caacatagaacaattcattcacacatcttcatttagtcatataaggccagtcacgaaagat 16921064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 272
Target Start/End: Complemental strand, 44306340 - 44306262
Alignment:
Q  193 aaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatat 272  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| ||  || ||||||||| |||||||  |||||||||    
T  44306340 aaggagaaaatacaacaccttataataaacatcacattcaacacatagtaa-tcattcacatatcttcatataatcatat 44306262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 202 - 294
Target Start/End: Original strand, 13350982 - 13351073
Alignment:
Q  202 atacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaagattta 294  Q
    ||||| ||||||||| |||||||||||||||| |||||| || ||||||||| || |||  |||||||||||| |||| |||| || ||||||    
T  13350982 atacatcaccttatggtaaacatcatattcaatacctaagaa-tcattcacatatattcttttaatcatataaagctattcacaaatgattta 13351073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 135 - 294
Target Start/End: Original strand, 45148533 - 45148692
Alignment:
Q  135 tcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagt-aaggagaaaatacaacaccttatgataaacatcatattcaa 233  Q
    |||||||||| |||||  ||||| |||||||||||||| ||| |||||||  |||||| || ||||||||||||  | ||| ||||||| ||  || |||    
T  45148533 tcaacatcaattatatcttatagttcaacaactccatatactatctcacaaaccaagtaaatgagaaaatacaatgcattaggataaacctcgcatacaa 45148632  T
Q  234 cacctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaagattta 294  Q
     || || | | ||||||||| ||||||| | |||||||||| |||| |||||| |||||||    
T  45148633 aacttagc-actcattcacatatcttcattcaatcatataaagctattcacgacagattta 45148692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 274
Target Start/End: Complemental strand, 49049049 - 49048952
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataa 274  Q
    ||||| |||||| ||||||| |||| |||||||| |  |||||||||||||||| |||||| |||  ||||||||| ||| ||||| ||| ||||||||    
T  49049049 tttcttacattctaagtaag-agaacatacaacatcccatgataaacatcatatccaacacataatcattcattcatacaacttcacttagtcatataa 49048952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 46472941 - 46472993
Alignment:
Q  122 atatatactttaatcaacatcaactatataatatagctcaacaactccataca 174  Q
    |||||| | ||||||||||| |||||||| |||||| ||||||||||||||||    
T  46472941 atatatgcattaatcaacataaactatatcatatagttcaacaactccataca 46472993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 291
Target Start/End: Complemental strand, 7285429 - 7285354
Alignment:
Q  216 gataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaagat 291  Q
    |||||||||||||| ||| |  |||| ||||||||||||||||||| ||| |||||||| | || |||||| ||||    
T  7285429 gataaacatcatatccaaaatataaccattcattcacacatcttcacttagtcatataaggatagtcacgatagat 7285354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 258
Target Start/End: Original strand, 19066545 - 19066603
Alignment:
Q  199 aaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatct 258  Q
    |||||||||||| ||||||||||| |||| |||| |||||||||| ||||||||| ||||    
T  19066545 aaaatacaacacattatgataaacctcatgttcagcacctaacaa-tcattcacatatct 19066603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 272
Target Start/End: Original strand, 12182955 - 12183068
Alignment:
Q  159 tcaacaactccatacactttctcacattccaagtaagga-gaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatc 257  Q
    |||||||||| ||||| | ||||||| | ||||||| || |||||| || ||   ||||||||||||||||||||||| || | || ||||||||||| |    
T  12182955 tcaacaactctatacaatatctcacaattcaagtaacgaagaaaatccatcatactatgataaacatcatattcaacatct-ataaatcattcacacaac 12183053  T
Q  258 ttcaattaatcatat 272  Q
    ||||  |||||||||    
T  12183054 ttcatataatcatat 12183068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 113
Target Start/End: Complemental strand, 20584212 - 20584171
Alignment:
Q  72 catcatcacattgtcatcataatttttaataatcatcaacat 113  Q
    |||||||||||||||||||||||  | |||||||||||||||    
T  20584212 catcatcacattgtcatcataatcatcaataatcatcaacat 20584171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 17986074 - 17986027
Alignment:
Q  213 tatgataaacatcatattcaacacctaacaattcattcacacatcttca 261  Q
    |||||||||||||||||||||||| || ||| ||||||||| |||||||    
T  17986074 tatgataaacatcatattcaacacttagcaa-tcattcacatatcttca 17986027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 31500109 - 31500201
Alignment:
Q  131 ttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaag-gagaaaatacaacaccttatgataaac 222  Q
    ||||||||| ||||||||||  ||||| ||| |||||   |||| ||| ||||  |||||||||  |||||||||||||||||| ||||||||    
T  31500109 ttaatcaacttcaactatattctatagttcatcaactttgtacaatttatcaccatccaagtaaaagagaaaatacaacaccttgtgataaac 31500201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 148; Significance: 7e-78; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 296 - 487
Target Start/End: Original strand, 14998917 - 14999108
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||     
T  14998917 aagcacaccaccaaaacccatcttagaagcatcacaatacaccacaaacgattccttcggattcggcaaaatcaacactggagctgaagtcaacctcttc 14999016  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||    
T  14999017 ttcaactcttggaaactcttctcacacttggcatcccaaacataagcttgtcctttccgagtcaactgcgtcaatggcaacgccaacttaga 14999108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 296 - 487
Target Start/End: Complemental strand, 15291828 - 15291637
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||  ||||||||||||| |||||     
T  15291828 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattcctttggattcagcaaaatcaacaccggagctgaagtcaacctcttc 15291729  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||||||||||||| | |||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  15291728 ttcaactcttggaaactcttgtcacacttggcatcccaaacataagtttgtcctttccgagtcaactgcgtcaatggcaacgccaacttaga 15291637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 296 - 487
Target Start/End: Original strand, 9292437 - 9292628
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||| |||||||||||| |||| |||||||| |||||     
T  9292437 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattcttcgggattcggcaaaatcaacactggagccgaagtcaacctcttc 9292536  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| |||||| ||||||||||| ||||||| ||||||||||||||||||    
T  9292537 ttcaactcttggaaactcttctcacacttggcatcccaaacataagcttgtcctttccgagtcaaatgcgtcaatggcaacgccaacttaga 9292628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 72 - 294
Target Start/End: Original strand, 24237726 - 24237948
Alignment:
Q  72 catcatcacattgtcatcataatttttaataatcatcaacattaattgatatatatactttaatcaacatcaactatataatatagctcaacaactccat 171  Q
    ||||| |||||||||||||||||| | || |||||||||||| |||||||||| |||| ||||||||||||||||||||| |||| ||||||||||||||    
T  24237726 catcaccacattgtcatcataattatcaacaatcatcaacatcaattgatatacatacattaatcaacatcaactatatattatatctcaacaactccat 24237825  T
Q  172 acactttctcacattccaagt-aaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcat 270  Q
    |||| |||| | | ||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||| || ||||| ||| ||||||| ||||||||    
T  24237826 acacgttcttataatccaagtaaaggagaaaatacaaaaccttatgataaatatcatattcaacacctaa-aaatcattaacatatcttcatttaatcat 24237924  T
Q  271 ataacgctaatcacgaaagattta 294  Q
    |||| |||| ||||||||||||||    
T  24237925 ataaagctattcacgaaagattta 24237948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 78 - 273
Target Start/End: Original strand, 49070671 - 49070865
Alignment:
Q  78 cacattgtcatcataatttttaataatcatcaacattaattgatatatatactttaatcaacatcaactatataatatagctcaacaactccatacactt 177  Q
    |||||||||||||||||| | |  || ||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  49070671 cacattgtcatcataattatcac-aaccatcaacatcaattgatatacatacattaatcaacatcaactatataatatagctcaacaactccatatactt 49070769  T
Q  178 tctcacattccaagt-aaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatata 273  Q
    ||||||| ||||||| ||||||| ||||||||||||||| ||||| ||||||||||||||||||||| ||| ||||| ||||||| |||||||||||    
T  49070770 tctcacaatccaagtaaaggagagaatacaacaccttatcataaatatcatattcaacacctaacaa-tcactcacatatcttcatttaatcatata 49070865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 299 - 487
Target Start/End: Complemental strand, 12341532 - 12341344
Alignment:
Q  299 cacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctctttttc 398  Q
    ||||| |||||||| ||||||||| ||||||||||||||| |||| |||||||| | |||||| |||||||||||| | | |||| |||  ||||| |||    
T  12341532 cacactaccaagactcatcttagatgcatcacaatacacaccaaatgattcctttgaattcggcaaaatcaacactagcgttgaattcagcctcttcttc 12341433  T
Q  399 aactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    || |||||||||||||||| ||||||||||||||||||||| | |||||| |||| |||||||||||||| || |||||||||||||||    
T  12341432 aattcttggaaactcttctcacacttagcatcccaaacatacgcttgtcctttccaagtcaactgcgtcaatgacaacgccaacttaga 12341344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 106 - 294
Target Start/End: Complemental strand, 47469640 - 47469453
Alignment:
Q  106 atcaacattaattgatatatatactttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaaggagaaaatac 205  Q
    |||||||| |||||||||||| || ||||||||||||||| ||||||||||| || || |||||| | |||| |||||||||||||||| |||||||| |    
T  47469640 atcaacatcaattgatatataaacattaatcaacatcaaccatataatatagttctaccactccaaatactt-ctcacattccaagtaaagagaaaatgc 47469542  T
Q  206 aacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaagattta 294  Q
    |||||||||||||||| ||||||||  || ||||| |||||||||||| ||||||| |||||||||||| |||| || |||||||||||    
T  47469541 aacaccttatgataaatatcatatttcacgcctaaaaattcattcacatatcttcatttaatcatataaggctagtcccgaaagattta 47469453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 135 - 271
Target Start/End: Complemental strand, 12134928 - 12134792
Alignment:
Q  135 tcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagt-aaggagaaaatacaacaccttatgataaacatcatattcaa 233  Q
    |||||||||||||||| |||||| |||||||||||||| ||||||||||| ||||||| || ||||||||||||||| ||||||||||||||||||||||    
T  12134928 tcaacatcaactatatcatatagttcaacaactccatatactttctcacaatccaagtaaaagagaaaatacaacactttatgataaacatcatattcaa 12134829  T
Q  234 cacctaacaattcattcacacatcttcaattaatcata 271  Q
     ||||||||| ||||||||| |||||||  ||||||||    
T  12134828 aacctaacaa-tcattcacatatcttcatataatcata 12134792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 72 - 274
Target Start/End: Complemental strand, 10238784 - 10238584
Alignment:
Q  72 catcatcacattgtcatcataatttttaataatcatcaacattaattgatatatatactttaatcaacatcaactatataatatagctcaacaactccat 171  Q
    |||||||||||| ||||||||||| | | ||||||||||||| |||||||||||| |  ||||||||||||||| ||||| ||||| || || | ||||     
T  10238784 catcatcacattttcatcataattatcagtaatcatcaacatcaattgatatataaatattaatcaacatcaaccatatagtatagttccaccattccaa 10238685  T
Q  172 acactttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcata 271  Q
    | || || ||| ||||||||||| |||||||| |||||||||||||| || |||||||||||||  ||| |||||||||||| ||||||| ||| |||||    
T  10238684 atac-ttatcatattccaagtaaagagaaaatgcaacaccttatgat-aatatcatattcaacaattaaaaattcattcacatatcttcatttagtcata 10238587  T
Q  272 taa 274  Q
    |||    
T  10238586 taa 10238584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 177 - 294
Target Start/End: Complemental strand, 50221188 - 50221071
Alignment:
Q  177 ttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacg 276  Q
    |||||| ||||||||||| |||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||| ||| |||||||| |    
T  50221188 ttctcatattccaagtaaagagaaaatgcaacaccttatgataaatatcatattaaacacctaacaattcattcacatatcttcatttagtcatataagg 50221089  T
Q  277 ctaatcacgaaagattta 294  Q
    ||| ||||||||||||||    
T  50221088 ctagtcacgaaagattta 50221071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 133 - 292
Target Start/End: Original strand, 12733050 - 12733209
Alignment:
Q  133 aatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaa-ggagaaaatacaacaccttatgataaacatcatattc 231  Q
    ||||||| ||||||||||  ||||| ||||||||| |  ||  ||||||||| | ||||||| ||||||||||||||||||||||||||||||||| |||    
T  12733050 aatcaacttcaactatatcctatagttcaacaacttcgcaccatttctcacaatacaagtaaaggagaaaatacaacaccttatgataaacatcatgttc 12733149  T
Q  232 aacacctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaagatt 292  Q
    ||||| |||||||| ||||||| ||||||| || ||||||||| |||| ||||||||||||    
T  12733150 aacacgtaacaatt-attcacatatcttcatttgatcatataaagctattcacgaaagatt 12733209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 135 - 290
Target Start/End: Complemental strand, 15014565 - 15014411
Alignment:
Q  135 tcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaac 234  Q
    ||||||||||||| || |||||| |  || |||||| | | ||||||| ||||||||||| |||||||||||||| ||||||||||| ||||||| ||||    
T  15014565 tcaacatcaactacatcatatagtttcaccactccaaata-tttctcatattccaagtaaagagaaaatacaacaacttatgataaatatcatatccaac 15014467  T
Q  235 acctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaaga 290  Q
    |  |||||||||||||||||||||||| ||| |||||||| |||| ||| ||||||    
T  15014466 atataacaattcattcacacatcttcatttagtcatataaggctagtcaagaaaga 15014411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 132 - 290
Target Start/End: Complemental strand, 16226452 - 16226295
Alignment:
Q  132 taatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattc 231  Q
    |||||||||||||  |||| |||||   ||||||||||||||| || |||||| ||||||||| ||||||||||||||| ||||||||||  ||||||||    
T  16226452 taatcaacatcaatcatatcatataatccaacaactccatacaattcctcacaatccaagtaacgagaaaatacaacacattatgataaatttcatattc 16226353  T
Q  232 aacacctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaaga 290  Q
    ||||||| | ||   ||||||||||| ||| |||||||||||| |||| ||||||||||    
T  16226352 aacacct-agaagaaattcacacatcatcatttaatcatataaagctattcacgaaaga 16226295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 131 - 294
Target Start/End: Original strand, 19558318 - 19558481
Alignment:
Q  131 ttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagt-aaggagaaaatacaacaccttatgataaacatcatat 229  Q
    |||||||||||||||||||| |||| | |||||||||| ||||| ||||||||| | ||||| |||||||||||||||||| ||||||||||||||||||    
T  19558318 ttaatcaacatcaactatatcatatggttcaacaactcgatacaatttctcacaattcaagtaaaggagaaaatacaacacattatgataaacatcatat 19558417  T
Q  230 tcaacacctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaagattta 294  Q
     |||||| |   |   ||||||||  ||||||  ||||||||||| |||| ||||||||||||||    
T  19558418 ccaacacat-gtagagcattcacatgtcttcatataatcatataaggctattcacgaaagattta 19558481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 122 - 236
Target Start/End: Complemental strand, 5371887 - 5371773
Alignment:
Q  122 atatatactttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaa-ggagaaaatacaacaccttatgataa 220  Q
    |||||| | |||||||||||||||||||| |||||| |||||||||||||||| ||||||||| | || | || |||||||||||||||| |||||||||    
T  5371887 atatatgcattaatcaacatcaactatatcatatag-tcaacaactccatacagtttctcacaattcaggcaaaggagaaaatacaacacattatgataa 5371789  T
Q  221 acatcatattcaacac 236  Q
    ||||||||||||||||    
T  5371788 acatcatattcaacac 5371773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 160 - 272
Target Start/End: Complemental strand, 17213122 - 17213010
Alignment:
Q  160 caacaactccatacactttctcacattccaagtaa-ggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatct 258  Q
    |||||||| |||||| ||||||||| | ||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||| |    
T  17213122 caacaacttcatacaatttctcacaattcaagtaaaggagaaaatacaacacattatgataaacatcatattcaacacctagcaa-tcattcacacattt 17213024  T
Q  259 tcaattaatcatat 272  Q
    |||  |||||||||    
T  17213023 tcatataatcatat 17213010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 136 - 260
Target Start/End: Complemental strand, 54364747 - 54364623
Alignment:
Q  136 caacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaa-ggagaaaatacaacaccttatgataaacatcatattcaac 234  Q
    ||||||| ||| ||| |||||  ||||||||  |||||  ||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  54364747 caacatcgactttatcatataattcaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaacaccttatgataaatatcatattcaac 54364648  T
Q  235 acctaacaattcattcacacatcttc 260  Q
    ||||||||| ||||||||| ||||||    
T  54364647 acctaacaa-tcattcacatatcttc 54364623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 176 - 294
Target Start/End: Complemental strand, 41917991 - 41917873
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataac 275  Q
    |||| |||||||||||||| ||  ||||||||||||||||||| |||||||||| |||||||||| || ||| ||||| | ||||| ||||||||| ||     
T  41917991 tttcccacattccaagtaaagatgaaatacaacaccttatgatgaacatcatatccaacacctaataagtcactcacataacttcatttaatcatacaaa 41917892  T
Q  276 gctaatcacgaaagattta 294  Q
    |||| ||||||||||||||    
T  41917891 gctattcacgaaagattta 41917873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 176 - 258
Target Start/End: Complemental strand, 34197428 - 34197347
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatct 258  Q
    ||||||| |||||||||||| |||| |||||||| ||||||||||| ||||||| |||||| |||||||||||||||||||||    
T  34197428 tttctcatattccaagtaag-agaacatacaacatcttatgataaatatcatatccaacacataacaattcattcacacatct 34197347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 72 - 157
Target Start/End: Complemental strand, 50223491 - 50223406
Alignment:
Q  72 catcatcacattgtcatcataatttttaataatcatcaacattaattgatatatatactttaatcaacatcaactatataatatag 157  Q
    ||||||||||||||||||| |||| | ||||||||||||||| ||||| |||||| || ||||||||||||||| |||| ||||||    
T  50223491 catcatcacattgtcatcacaattatcaataatcatcaacatcaattggtatatacacattaatcaacatcaaccatattatatag 50223406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 131 - 291
Target Start/End: Original strand, 18275711 - 18275868
Alignment:
Q  131 ttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatatt 230  Q
    ||||||||| |||||||||| | |||| |  || |||||| | | ||||||| |||| ||||||| |||| |||||||| ||||||||||| |||||||     
T  18275711 ttaatcaacttcaactatatcacatagtttcaccactccaaata-tttctcatattctaagtaag-agaacatacaacatcttatgataaatatcatat- 18275807  T
Q  231 caacacctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaagat 291  Q
    ||||   ||||||||||||||||| |||||| ||| |||||||| |||| |||||||||||    
T  18275808 caacgtataacaattcattcacacctcttcatttagtcatataaggctagtcacgaaagat 18275868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 122 - 236
Target Start/End: Complemental strand, 17376749 - 17376634
Alignment:
Q  122 atatatactttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaa-ggagaaaatacaacaccttatgataa 220  Q
    |||||| | |||| |||||||||||| || |||||  | |||||| ||||| | ||||||||| | ||||||| ||||||||||||||||  ||||||||    
T  17376749 atatatgcattaaccaacatcaactaaatcatataatttaacaaccccatataatttctcacaattcaagtaaaggagaaaatacaacacactatgataa 17376650  T
Q  221 acatcatattcaacac 236  Q
    ||||||||||||||||    
T  17376649 acatcatattcaacac 17376634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 181 - 271
Target Start/End: Complemental strand, 13593962 - 13593872
Alignment:
Q  181 cacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcata 271  Q
    |||||||||||||| ||  ||||||||||||||||||| |||||||||| ||||| ||||||| ||| ||||| | ||||| |||||||||    
T  13593962 cacattccaagtaaagatgaaatacaacaccttatgatgaacatcatatccaacatctaacaagtcactcacataacttcatttaatcata 13593872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 184 - 291
Target Start/End: Complemental strand, 41257600 - 41257493
Alignment:
Q  184 attccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgctaatca 283  Q
    |||||||| || | |||||| | ||||||||||||||  ||||||| |||||  |||||||||||||||||||||||| ||| |  ||||| |||| |||    
T  41257600 attccaagcaaagggaaaatgccacaccttatgataattatcatatccaacatataacaattcattcacacatcttcatttagttgtataaggctagtca 41257501  T
Q  284 cgaaagat 291  Q
    ||||||||    
T  41257500 cgaaagat 41257493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 196 - 292
Target Start/End: Complemental strand, 7187151 - 7187056
Alignment:
Q  196 gagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaagatt 292  Q
    ||||||| |||||| |||||||| || ||||||| ||||| ||||||||||| ||||||| |||||  || |||||||| |||| ||||||||||||    
T  7187151 gagaaaacacaacatcttatgatcaatatcatatccaacatctaacaattca-tcacacaccttcatctagtcatataaggctagtcacgaaagatt 7187056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 106 - 293
Target Start/End: Complemental strand, 19082388 - 19082201
Alignment:
Q  106 atcaacattaattgatatatatactttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaa-ggagaaaata 204  Q
    |||| ||| |||| |||||||||| || | ||||||| |||| || |||||  |||| |||| ||| || ||||| ||| | ||||||| ||||||||||    
T  19082388 atcaccatcaattaatatatatacattcaccaacatcgactacatcatataattcaataacttcatgcaatttcttacaattcaagtaaaggagaaaata 19082289  T
Q  205 caacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaagattt 293  Q
     | |||  || |||||||||||||||||||||||| ||| || |||| ||||||| |  ||||||||||| |||| |||| ||| ||||    
T  19082288 tatcacgctaagataaacatcatattcaacacctatcaa-tccttcatacatcttaatataatcatataaagctattcacaaaatattt 19082201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 245
Target Start/End: Original strand, 38763677 - 38763793
Alignment:
Q  131 ttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaa-ggag-aaaatacaacaccttatgataaacatcata 228  Q
    |||||| || |||||||||| |||||| ||||||||| ||||||  || ||| | | ||||||| |||| |||||||||||||| |||||||| ||||||    
T  38763677 ttaatccacttcaactatatcatatagttcaacaacttcatacaacttttcataatacaagtaaaggaggaaaatacaacacctaatgataaatatcata 38763776  T
Q  229 ttcaacacctaacaatt 245  Q
    || || |||| ||||||    
T  38763777 tttaagacctcacaatt 38763793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 196 - 288
Target Start/End: Complemental strand, 12245495 - 12245404
Alignment:
Q  196 gagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaa 288  Q
    ||||| |||||||| ||||||||||| |||||| ||||||   ||||| |||||| ||| |||||| ||| |||||||| |||| ||||||||    
T  12245495 gagaacatacaacatcttatgataaatatcata-tcaacatacaacaagtcattcccacttcttcatttagtcatataaggctagtcacgaaa 12245404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 215 - 291
Target Start/End: Complemental strand, 43282589 - 43282513
Alignment:
Q  215 tgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaagat 291  Q
    ||||||| ||||||| ||| || ||||||||||||||||||||| || ||| ||||| || || | |||||||||||    
T  43282589 tgataaatatcatatccaaaacataacaattcattcacacatctccatttagtcatacaaggcaagtcacgaaagat 43282513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 292
Target Start/End: Original strand, 34394101 - 34394214
Alignment:
Q  177 ttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacg 276  Q
    |||||| ||||||||||||  | ||| |||||| || |||||||||||||||| |||||  |||| ||||| ||||| |||| || ||| |||||| | |    
T  34394101 ttctcatattccaagtaagagggaaa-acaacatctcatgataaacatcatatccaacatgtaaccattcaatcacatatctccacttagtcatat-agg 34394198  T
Q  277 ctaatcacgaaagatt 292  Q
    ||| ||||||||||||    
T  34394199 ctagtcacgaaagatt 34394214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 294
Target Start/End: Complemental strand, 40901911 - 40901800
Alignment:
Q  184 attccaagtaaggagaaaatacaa-caccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgctaatc 282  Q
    ||||||||||||||  ||||||||  | |||||||| ||||||||||  ||||| |||||| ||| ||||| | ||||| |||| |||| || |||| ||    
T  40901911 attccaagtaaggatgaaatacaataatcttatgatgaacatcatatcgaacacttaacaagtcactcacataacttcatttaaccatacaaagctattc 40901812  T
Q  283 acgaaagattta 294  Q
    || |||||||||    
T  40901811 accaaagattta 40901800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 144; Significance: 2e-75; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 296 - 487
Target Start/End: Original strand, 181557 - 181748
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||| |||||     
T  181557 aagcacaccaccaagacccatctttgaagcatcacaatacacaacaaacgattcattcggattcggcaaaatcaacactggagctgaagtcaacctcttc 181656  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| |||||| ||||||||||||||||||| ||||||||| ||||||||    
T  181657 ttcaactcttggaaactcttctcacacttggcatcccaaacataagcttgtcctttccgagtcaactgcgtcaatggcaacgctaacttaga 181748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 144; Significance: 2e-75; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 296 - 487
Target Start/End: Complemental strand, 12639443 - 12639252
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||| ||| |     
T  12639443 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggcaaaatcaacaccggagctgaagtcaacctcctc 12639344  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    ||||||||||||||||||||||  ||||| |||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||    
T  12639343 ttcaactcttggaaactcttctcgcacttggcatcccaaacataagcttgtcctttccgagtcaactgcgtcaatggcaacgccaacttaga 12639252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 296 - 487
Target Start/End: Complemental strand, 24830398 - 24830207
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||     
T  24830398 aagcacaccaccaagacccatcttagaagcatcacaatacaccacaaacgattccttcggattcggcaaaatcaacactagagctgaagtcaacctcttc 24830299  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||||||||||||||| |||||| |||||||| ||||||| |||||| ||||||||||||||||||  ||||||||||||||||||    
T  24830298 ttcaactcttggaaactcttctcacacttggcatcccacacataagcttgtcctttccgagtcaactgcgtcgatggcaacgccaacttaga 24830207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 296 - 485
Target Start/End: Complemental strand, 22760779 - 22760590
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||| |||||| |||||||||| || |||||     
T  22760779 aagcacaccaccaagacccatcttagaagcatcacaatacacagcaaacgattccttcggatttggcaaaatgaacactggagctgaagttaacctcttc 22760680  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaactta 485  Q
    ||||||||||  |||||||||| ||||||||||||||||||||||| |||||| |||||||||||| |||||| ||||||||||||||||    
T  22760679 ttcaactcttataaactcttctcacacttagcatcccaaacataagcttgtcctttccgagtcaacagcgtcaatggcaacgccaactta 22760590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 296 - 487
Target Start/End: Original strand, 22279338 - 22279529
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    ||||||||||||||||||||||  |||||||||| ||||||| ||||||||||||||||||||||| |||||||||||| |||| |||||||| ||||||    
T  22279338 aagcacaccaccaagacccatcaaagaagcatcataatacaccacaaacgattccttcggattcggcaaaatcaacactggagccgaagtcaacctcttt 22279437  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| |||||| |||||||| || || |||| ||||||||||||||||||    
T  22279438 ttcaactcttggaaactcttctcacacttggcatcccaaacataagcttgtcctttccgagttaattgtgtcaatggcaacgccaacttaga 22279529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 300 - 487
Target Start/End: Complemental strand, 24568874 - 24568687
Alignment:
Q  300 acaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctctttttca 399  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||| ||||||| ||||| ||||    
T  24568874 acaccaccaagacccatcttagaagcatcacaatacacaagaaacgattccttcggattcggtaaaatcaacactggagctaaagtcaacctcttcttca 24568775  T
Q  400 actcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
     ||||||||||||||  | ||||||||||||||||| ||||| |||||| ||||||||||||||||||| |||||||||||| |||||    
T  24568774 cctcttggaaactctattcacacttagcatcccaaaaataagcttgtcctttccgagtcaactgcgtcaatggcaacgccaatttaga 24568687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 296 - 487
Target Start/End: Original strand, 25129842 - 25130033
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||| ||| |||| ||||||| |||||||| ||| ||||||||||||| |||||     
T  25129842 aagcacgccaccgagacccatcttagaagcatcacaatacacaacaaacaatttcttcagattcggcaaaatcaaaactggagctgaagtcaacctcttc 25129941  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    || ||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||| |||||||||||    
T  25129942 tttaactcttggaaactcttctcacacttagcatcccaatcataagtttgttccttccgagtcaactgcgtcaatggcaatgccaacttaga 25130033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 143 - 292
Target Start/End: Original strand, 6093831 - 6093980
Alignment:
Q  143 aactatataatatagctcaacaactccatacactttctcacattccaagtaa-ggagaaaatacaacaccttatgataaacatcatattcaacacctaac 241  Q
    |||||||| |||||| |||||||||||||| ||||||||||| ||||||||| |||||||||||  | | ||||||||||||||||||||||||||||||    
T  6093831 aactatatcatatagttcaacaactccatatactttctcacaatccaagtaaaggagaaaatacttcgcattatgataaacatcatattcaacacctaac 6093930  T
Q  242 aattcattcacacatcttcaattaatcatataacgctaatcacgaaagatt 292  Q
    |||| | ||||| ||||||| |||||||||||| |||| ||||||||||||    
T  6093931 aatt-actcacatatcttcatttaatcatataaagctattcacgaaagatt 6093980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 122 - 294
Target Start/End: Original strand, 18534804 - 18534976
Alignment:
Q  122 atatatactttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagt-aaggagaaaatacaacaccttatgataa 220  Q
    |||||| | |||||||||||||||||||| |||||| |||||||||||||| | ||||||||| | ||||| |||||||||||||||||| |||||||||    
T  18534804 atatatgcattaatcaacatcaactatatcatatagttcaacaactccatataatttctcacaattcaagtaaaggagaaaatacaacacattatgataa 18534903  T
Q  221 acatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaagattta 294  Q
     ||||||||||||||| |   ||  |||||||| |||||||  ||||||||||| |||| ||||||||||||||    
T  18534904 tcatcatattcaacacat-gtaaaacattcacatatcttcatataatcatataaagctattcacgaaagattta 18534976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 122 - 272
Target Start/End: Complemental strand, 24562060 - 24561910
Alignment:
Q  122 atatatactttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaa-ggagaaaatacaacaccttatgataa 220  Q
    |||||| | |||||||||||| ||| ||| |||||  ||||||||  |||||  ||||||||| ||||||||| ||||||||||||||||||||||||||    
T  24562060 atatatgcattaatcaacatcgactttatcatataattcaacaacatcatactatttctcacaatccaagtaaaggagaaaatacaacaccttatgataa 24561961  T
Q  221 acatcatattcaacacctaacaattcattcacacatcttcaattaatcatat 272  Q
    ||||||||||||||| ||||||| ||||||||| |||||||  |||||||||    
T  24561960 acatcatattcaacatctaacaa-tcattcacatatcttcatataatcatat 24561910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 106 - 233
Target Start/End: Original strand, 22331679 - 22331807
Alignment:
Q  106 atcaacattaattgatatatatactttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagt-aaggagaaaata 204  Q
    |||| ||| |||| |||||||| | ||||||||||| |||||||| |||||| |||||||||||||||| ||||||||| | ||||| |||||||| |||    
T  22331679 atcaccatcaattaatatatatgcattaatcaacataaactatatcatatagttcaacaactccatacaatttctcacaatacaagtaaaggagaagata 22331778  T
Q  205 caacaccttatgataaacatcatattcaa 233  Q
    |||||| ||||||||||||||||||||||    
T  22331779 caacacattatgataaacatcatattcaa 22331807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 177 - 288
Target Start/End: Original strand, 24276810 - 24276920
Alignment:
Q  177 ttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacg 276  Q
    |||||| |||||||||||| ||||||||||||||| ||||||||| ||||||| |||||||||| |||||||||||||||||||| ||| |||||||| |    
T  24276810 ttctcatattccaagtaag-agaaaatacaacaccctatgataaatatcatatccaacacctaaaaattcattcacacatcttcatttagtcatataaag 24276908  T
Q  277 ctaatcacgaaa 288  Q
    ||| ||||||||    
T  24276909 ctagtcacgaaa 24276920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 135 - 236
Target Start/End: Original strand, 43641706 - 43641808
Alignment:
Q  135 tcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaa-ggagaaaatacaacaccttatgataaacatcatattcaa 233  Q
    ||||||||||||| || |||||| |||||||||||||||| ||||||||| | ||||||| |||||||||||||||| ||||||||||||||||||||||    
T  43641706 tcaacatcaactacatcatatagttcaacaactccatacaatttctcacaattcaagtaaaggagaaaatacaacacattatgataaacatcatattcaa 43641805  T
Q  234 cac 236  Q
    |||    
T  43641806 cac 43641808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 176 - 291
Target Start/End: Original strand, 66469 - 66583
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataac 275  Q
    ||||||| |||||||||||| |||| |||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||| || ||| ||||| ||     
T  66469 tttctcatattccaagtaag-agaacatacaacatcttatgataaatatcatatacaacacataacaattcattcacacatctccatttagtcatacaag 66567  T
Q  276 gctaatcacgaaagat 291  Q
    |||| |||||||||||    
T  66568 gctagtcacgaaagat 66583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 176 - 274
Target Start/End: Complemental strand, 22787281 - 22787184
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataa 274  Q
    |||||||||||| || |||| |||| |||||||| ||||||||||| |||||||||||||  |||||||||||||||||||||||| ||| ||||||||    
T  22787281 tttctcacattctaattaag-agaacatacaacatcttatgataaatatcatattcaacatataacaattcattcacacatcttcatttagtcatataa 22787184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 135 - 235
Target Start/End: Complemental strand, 19434754 - 19434653
Alignment:
Q  135 tcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaa-ggagaaaatacaacaccttatgataaacatcatattcaa 233  Q
    ||||||||||||| || |||||| |||| |||||| |||| ||||||||| | ||||||| ||||||||||||| || ||||||||||||||||||||||    
T  19434754 tcaacatcaactacatcatatagttcaaaaactccttacaatttctcacaattcaagtaaaggagaaaatacaatacattatgataaacatcatattcaa 19434655  T
Q  234 ca 235  Q
    ||    
T  19434654 ca 19434653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 200 - 294
Target Start/End: Original strand, 9635744 - 9635838
Alignment:
Q  200 aaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaagattta 294  Q
    ||||||| |||||||| || |||||||||| ||||||||||||| ||| ||||| | ||||| ||||||||| || |||| ||||||||||||||    
T  9635744 aaatacatcaccttataatgaacatcatatccaacacctaacaagtcactcacataacttcatttaatcatacaaagctattcacgaaagattta 9635838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 177 - 291
Target Start/End: Original strand, 25600866 - 25600979
Alignment:
Q  177 ttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacg 276  Q
    |||||| |||||||||||| |||| |||||| | ||||||||||| ||||||| || ||| ||||||||||||||||||||| || ||| ||||| ||      
T  25600866 ttctcatattccaagtaag-agaacatacaatatcttatgataaatatcatatccagcacataacaattcattcacacatctccatttagtcatacaaga 25600964  T
Q  277 ctaatcacgaaagat 291  Q
    ||| |||||||||||    
T  25600965 ctagtcacgaaagat 25600979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 152 - 236
Target Start/End: Original strand, 45618407 - 45618492
Alignment:
Q  152 atatagctcaacaactccatacactttctcacattccaagtaag-gagaaaatacaacaccttatgataaacatcatattcaacac 236  Q
    |||||| ||||||||| |||||| ||||||||| | |||||||  ||||||||||||||| |||||||||| ||||||||||||||    
T  45618407 atatagttcaacaacttcatacaatttctcacaattcaagtaaaagagaaaatacaacacattatgataaaaatcatattcaacac 45618492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 330 - 437
Target Start/End: Complemental strand, 10038499 - 10038392
Alignment:
Q  330 caatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctctttttcaactcttggaaactcttcttacacttagcat 429  Q
    ||||||||||||||  ||||||| |||||||||||| |||||||| | | |||  |||| ||| | |||||||||||||||||||  | |||||||| ||    
T  10038499 caatacacaacaaaaaattcctttggattcggaaaagtcaacactggcgatgacatcaacctcctcttcaactcttggaaactctcttcacacttagaat 10038400  T
Q  430 cccaaaca 437  Q
    ||||||||    
T  10038399 cccaaaca 10038392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 176 - 291
Target Start/End: Complemental strand, 24088622 - 24088508
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataac 275  Q
    |||||||||||| ||||||| || | |||| ||| ||||||||||| ||||||| |||||| ||||||||||||| ||||||| || ||| ||||| ||     
T  24088622 tttctcacattctaagtaag-aggacataccacatcttatgataaatatcatatccaacacataacaattcattctcacatctccatttagtcatacaag 24088524  T
Q  276 gctaatcacgaaagat 291  Q
    |||| |||| ||||||    
T  24088523 gctagtcactaaagat 24088508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 198 - 284
Target Start/End: Original strand, 25133147 - 25133232
Alignment:
Q  198 gaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgctaatcac 284  Q
    |||||||||||||||| |||||||||||| ||||||||| |||| ||| | ||||||||||||| | |||||||||| |||| ||||    
T  25133147 gaaaatacaacaccttgtgataaacatcacattcaacacttaac-atttactcacacatcttcattcaatcatataaagctattcac 25133232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 9782168 - 9782076
Alignment:
Q  178 tctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatat 272  Q
    ||||| |||||||||||| |||| |||||||| ||||||||||| |||||| ||||||  | |||||||||||| ||||||||| ||| ||||||    
T  9782168 tctcatattccaagtaag-agaacatacaacatcttatgataaatatcata-tcaacatatcacaattcattcatacatcttcatttagtcatat 9782076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 271
Target Start/End: Original strand, 29113238 - 29113333
Alignment:
Q  176 tttctcacattccaagtaa-ggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcata 271  Q
    ||||||||| ||||| ||| |||||||||||  ||| ||||||||||||||||||||| |||||| ||| |||| |||| |||||||  ||||||||    
T  29113238 tttctcacaatccaaataaaggagaaaatacttcacattatgataaacatcatattcatcacctagcaa-tcatccacatatcttcatataatcata 29113333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 176 - 259
Target Start/End: Original strand, 19658866 - 19658947
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatctt 259  Q
    ||||||| |||||||||||  ||||||||||||| || |||||||| ||||||| |||||  |||||||||| |||||||||||    
T  19658866 tttctcatattccaagtaaa-agaaaatacaacatctcatgataaatatcatatccaacatttaacaattca-tcacacatctt 19658947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 176 - 239
Target Start/End: Original strand, 24840831 - 24840894
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacaccta 239  Q
    ||||||||| | ||||| ||||||||||||||||| |||||||||| |||||||| || |||||    
T  24840831 tttctcacaattcaagtgaggagaaaatacaacacattatgataaaaatcatattaaaaaccta 24840894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 179 - 233
Target Start/End: Original strand, 32464911 - 32464966
Alignment:
Q  179 ctcacattccaagtaaggag-aaaatacaacaccttatgataaacatcatattcaa 233  Q
    |||||||||||||||| ||| |||||||| ||||||| ||||||||||||||||||    
T  32464911 ctcacattccaagtaaagaggaaaatacatcaccttaagataaacatcatattcaa 32464966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 221 - 271
Target Start/End: Original strand, 20272424 - 20272474
Alignment:
Q  221 acatcatattcaacacctaacaattcattcacacatcttcaattaatcata 271  Q
    |||| ||||||||||||||| |||||||||||| |||||||  ||||||||    
T  20272424 acattatattcaacacctaaaaattcattcacatatcttcatataatcata 20272474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 411
Target Start/End: Complemental strand, 10098895 - 10098814
Alignment:
Q  330 caatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctctttttcaactcttggaaac 411  Q
    ||||||||||||||  ||||||| |||||||||||| |||||||| | | |||  |||| ||  | ||||||||||||||||    
T  10098895 caatacacaacaaaaaattcctttggattcggaaaagtcaacactggcgatgacatcaaccttctcttcaactcttggaaac 10098814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 269
Target Start/End: Original strand, 19665582 - 19665674
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatca 269  Q
    ||||||| ||| ||||||| ||||||| |||||  |||||| | || |||| || ||||| ||||||||||| |||||||||| || |||||||    
T  19665582 tttctcatattgcaagtaacgagaaaacacaacttcttatgttcaatatcacatccaacatctaacaattca-tcacacatctccatttaatca 19665674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 229
Target Start/End: Complemental strand, 19670391 - 19670339
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatat 229  Q
    ||||||| |||||||||||| ||||||||||||| || |||||||| |||||||    
T  19670391 tttctcatattccaagtaag-agaaaatacaacatctcatgataaatatcatat 19670339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 256
Target Start/End: Original strand, 721387 - 721466
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacat 256  Q
    |||||||||||| |||||| ||| | |||||||| ||||||| ||| |||| ||||||||  |||| |||||||| |||||    
T  721387 tttctcacattctaagtaa-gaggacatacaacatcttatgacaaatatcacattcaacatataaccattcattcccacat 721466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 136 - 215
Target Start/End: Original strand, 20272350 - 20272430
Alignment:
Q  136 caacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaa-ggagaaaatacaacaccttat 215  Q
    ||||||| ||| ||| |||||  |||| |||  |||||| ||||||||| ||||||||| |||||||||||||||| ||||    
T  20272350 caacatcgactttatcatataattcaataacatcatacaatttctcacaatccaagtaaaggagaaaatacaacacattat 20272430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 140; Significance: 4e-73; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 296 - 487
Target Start/End: Complemental strand, 25450 - 25259
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| || |||||||||| |||||     
T  25450 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggcagaatcaacactggacctgaagtcaacctcttc 25351  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    ||||| |||||||||||||||| ||||||||||||||||||||| | |||||| |||||||||||||||||||  |||||||||||||||||    
T  25350 ttcaattcttggaaactcttctcacacttagcatcccaaacatacgcttgtcctttccgagtcaactgcgtcaaaggcaacgccaacttaga 25259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 140; Significance: 4e-73; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 296 - 491
Target Start/End: Complemental strand, 32086 - 31891
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||| ||||| ||||||| |||||     
T  32086 aagcacaccaccaagacccatcttagaagcatcacaatacacaaaaaacgattccttcgtattcggcaaaatcaacactggagctaaagtcaacctcttc 31987  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttagaaaat 491  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||| |||||| ||||||||||||| ||||| || |||||||||||||||||||    
T  31986 ttcaactcttggaaactcttctcacatttagcatcccaaacataaggttgtcctttccgagtcaactacgtcaatgacaacgccaacttagaaaat 31891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 300 - 487
Target Start/End: Original strand, 6851 - 7038
Alignment:
Q  300 acaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctctttttca 399  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||| ||||||||||||| ||||| | ||    
T  6851 acaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggcgaagtcaacactggagctgaagtcaacctcttctgca 6950  T
Q  400 actcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||||||||||| |||||| || ||| ||||||||| |||||| ||| ||||||| ||||||| ||||||||||||||||||    
T  6951 actcttggaaactcttctcacacttggcgtccaaaacataagcttgtcctttcggagtcaattgcgtcaatggcaacgccaacttaga 7038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 72821 - 72864
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaa 339  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  72821 aagcacaccaccaagacccatctttgaagcatcacaatacacaa 72864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 139; Significance: 2e-72; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 72 - 294
Target Start/End: Complemental strand, 44939 - 44715
Alignment:
Q  72 catcatcacattgtcatcataatttttaataatcatcaacattaattgatatatatactttaatcaacatcaacta--tataatatagctcaacaactcc 169  Q
    ||||||||||||||||| |||||| | ||||||||||||||| ||||||||||||||| |||||||||||||||||  |||||||||||||||||||||     
T  44939 catcatcacattgtcattataattatcaataatcatcaacatcaattgatatatatacattaatcaacatcaactatatataatatagctcaacaactct 44840  T
Q  170 atacactttctcacattccaagta-aggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatc 268  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||| | ||||||| ||||||    
T  44839 atacactttctcacattccaagtagaggagaaaatacaacaccttataataaacatcatattcaacacctatcaa-tcattcatagatcttcatttaatc 44741  T
Q  269 atataacgctaatcacgaaagattta 294  Q
    || ||| |||| ||| ||||||||||    
T  44740 atgtaaagctattcatgaaagattta 44715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 138; Significance: 6e-72; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 78 - 294
Target Start/End: Original strand, 4788 - 5004
Alignment:
Q  78 cacattgtcatcataatttttaataatcatcaacattaattgatatatatactttaatcaacatcaactatataatatagctcaacaactccatacactt 177  Q
    |||||||||||||||||| | || || ||||||| | |||||||||| |||| |||||||| |||||||||||||||||||||||||||| |||||||||    
T  4788 cacattgtcatcataattatcaacaaccatcaacgtcaattgatatacatacattaatcaatatcaactatataatatagctcaacaacttcatacactt 4887  T
Q  178 tctcacattccaagt-aaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacg 276  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||| |    
T  4888 tctcacaatccaagtaaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaa-tcattcacatatcttcatttaatcatataaag 4986  T
Q  277 ctaatcacgaaagattta 294  Q
    ||| ||||||||| ||||    
T  4987 ctattcacgaaaggttta 5004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1488 (Bit Score: 136; Significance: 1e-70; HSPs: 1)
Name: scaffold1488
Description:

Target: scaffold1488; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 296 - 487
Target Start/End: Complemental strand, 1475 - 1284
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||| |||||     
T  1475 aagcacaccaccaagacccatcttagacgcatcacaatacacaacaaacgattccttcggattcagcaaaatcaacactggagctgaagtcaacctcttc 1376  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||  ||||| ||| ||||||||||||||| ||||||||| ||||||||    
T  1375 ttcaattcttggaaactcttctcacacttagcatcccaaacataagcatgtcctttcggagtcaactgcgtcaatggcaacgcaaacttaga 1284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 136; Significance: 1e-70; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 296 - 487
Target Start/End: Original strand, 15691 - 15882
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||| || |||||     
T  15691 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaatgattccttcggattcggcaaaatcaacactggagctgaagttaacctcttc 15790  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||  ||||| |||| |||||||||||||| || |||||||||||||||    
T  15791 ttcatctcttggaaactcttctcacacttagcatcccaaacataagcatgtcctttccaagtcaactgcgtcaatgacaacgccaacttaga 15882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 136; Significance: 1e-70; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 296 - 487
Target Start/End: Original strand, 1095 - 1286
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||  |||||||||||| ||||||||||||| |||||     
T  1095 aagcacaccaccaagacccatcttagaagcatcacaatacaccacaaacgattccttcagattcgtcaaaatcaacactggagctgaagtcaacctcttc 1194  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||| ||  || ||||||||||||||||||| ||||||||||||||||||    
T  1195 ttcacctcttggaaactcttctcacacttagcatcccaaacataagctttccctttccgagtcaactgcgtcaatggcaacgccaacttaga 1286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 136; Significance: 1e-70; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 296 - 487
Target Start/End: Complemental strand, 105246 - 105055
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||   |||     
T  105246 aagcacatcaccaagacccatctttgaagcatcacaatacacaacaaacgattctttcggattcggaaaaatcaacactggagctgaagtcaactgcttc 105147  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| |||||| ||| ||||||||||||||| ||||||||||||||||||    
T  105146 ttcaactcttggaaactcttctcacacttggcatcccaaacataagcttgtcctttctgagtcaactgcgtcaatggcaacgccaacttaga 105055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 261
Target Start/End: Original strand, 78596 - 78678
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttca 261  Q
    ||||||| ||| |||||||| ||||||||||||| || |||||||  ||||||| ||||| || |||||||| |||||||||||||    
T  78596 tttctcatatttcaagtaag-agaaaatacaacatctcatgataattatcatatccaacatct-acaattca-tcacacatcttca 78678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 136; Significance: 1e-70; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 296 - 487
Target Start/End: Original strand, 25459 - 25650
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||     
T  25459 aagcacaccaccaagacccatcttagcagcatcacaatatacaacaaacgattccttcggattcggcaaaatcaacactagagctgaagtcaacctcttc 25558  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||| |||||| ||| ||||||||||||||| | |||| |||||||||||    
T  25559 ttcaactattggaaactcttctcacacttagcatcccaaacataagcttgtcctttctgagtcaactgcgtcaattgcaaagccaacttaga 25650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 296 - 486
Target Start/End: Complemental strand, 133162 - 132972
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||| | |||     
T  133162 aagcacgccactaagacccatcttagaagcatcacaatacataacaaacgattccttcggattcggcaaaatcaacacttgagttgaagtcaaccgcttc 133063  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttag 486  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| |||||| |||| |||||||||||||| |||||||||||||||||    
T  133062 ttcaactcttggaaactcttctcacacttggcatcccaaacataagcttgtcctttcctagtcaactgcgtcaatggcaacgccaacttag 132972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 135; Significance: 4e-70; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 296 - 486
Target Start/End: Original strand, 33718 - 33908
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||| ||||||||||||| |||||     
T  33718 aagcacaccatcaagacccatcttagaagcatcacaatacaccataaacgattccttcggattcggcaaaatcaacactggagctgaagtcaacctcttc 33817  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttag 486  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| |||||| ||||||||||||||||||| |||||  ||||||||||    
T  33818 ttcaactcttggaaactcttctcacacttggcatcccaaacataagcttgtcctttccgagtcaactgcgtcaatggcagtgccaacttag 33908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 129; Significance: 1e-66; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 296 - 487
Target Start/End: Complemental strand, 2626 - 2434
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagc-tgaagtcaatctctt 394  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||  |||||||| |||||    
T  2626 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattctttcggattcggcaaaatcaacactagagcacgaagtcaacctctt 2527  T
Q  395 tttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
     |||||||||||||||||||||| |||||| |||||||||||||| | ||| ||||| |||||||||||||||| |||||||||||| |||||    
T  2526 cttcaactcttggaaactcttctcacacttggcatcccaaacatacgcttgcccctttcgagtcaactgcgtcaatggcaacgccaaattaga 2434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 128; Significance: 6e-66; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 296 - 487
Target Start/End: Complemental strand, 8534 - 8343
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||| |||||||||||| ||||||||||||| | |||     
T  8534 aagcacaccaccaagacccatctttgaagcatcacaatacacaacaaacgattccttcgaatgcggcaaaatcaacactggagctgaagtcaaccgcttc 8435  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||| |||| |||||| |||||| |||||||||||||||| |||||| ||||||||||||||||||| |||||| |||||||||||    
T  8434 ttcaactcttagaaaatcttctcacacttggcatcccaaacataagcttgtcctttccgagtcaactgcgtcaatggcaatgccaacttaga 8343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 128; Significance: 6e-66; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 296 - 487
Target Start/End: Complemental strand, 47086 - 46895
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||||||  |||||  |||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||| |||||     
T  47086 aagcacaccaccaagacttatctttaaagcatcacaatacacaacaaatgattccttcggattcggcaaaatcaacactggagctgaagtcaacctcttc 46987  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||  |||||| ||||||||||||||||||| ||||||| ||||||||||    
T  46986 ttcaactcttggtaactcttctcacacttagcatcccaaacataaacttgtcctttccgagtcaactgcgtcaatggcaacaccaacttaga 46895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 127; Significance: 2e-65; HSPs: 2)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 300 - 462
Target Start/End: Original strand, 2915 - 3077
Alignment:
Q  300 acaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctctttttca 399  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | || |||||||| ||||| ||||    
T  2915 acaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggcaaaatcaacactggggccgaagtcaacctcttcttca 3014  T
Q  400 actcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaact 462  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||    
T  3015 actcttggaaactcttctcacacttagcatcccaaacataagcttgccccttccgagtcaact 3077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 300 - 424
Target Start/End: Original strand, 8902 - 9026
Alignment:
Q  300 acaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctctttttca 399  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | || |||||||| ||||| ||||    
T  8902 acaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggcaaaatcaacactggggccgaagtcaacctcttcttca 9001  T
Q  400 actcttggaaactcttcttacactt 424  Q
    |||||||||||||||||| ||||||    
T  9002 actcttggaaactcttctcacactt 9026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 116; Significance: 8e-59; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 296 - 487
Target Start/End: Complemental strand, 11383 - 11192
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||| |||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||     
T  11383 aagcactccaccaagacccatcaaagaagcatcacaatacactacaaacgattccttcggattcggcaaaatcaacactggagctgaagtcaacctcttc 11284  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    ||||| |||||||||||||||| ||||||  ||||||||||||||| ||  || |||||||||| |||||||| ||||||||||| ||||||    
T  11283 ttcaattcttggaaactcttctcacacttgtcatcccaaacataagcttcccctttccgagtcagctgcgtcaatggcaacgccatcttaga 11192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 111; Significance: 8e-56; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 321 - 487
Target Start/End: Complemental strand, 7576 - 7410
Alignment:
Q  321 gaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctctttttcaactcttggaaactcttcttac 420  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||| |||||||||||| ||||||||| ||    
T  7576 gaagcatcacaatacacaacaaacgattccttcggattcggcaaaatcaacactggagctgaagtcaacctcttcttcaactcttggtaactcttctcac 7477  T
Q  421 acttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    ||||||||||||||||||||| ||  || || |||||||||| ||||| ||||||| ||||||||||    
T  7476 acttagcatcccaaacataagcttacccttttcgagtcaactacgtcaatggcaacaccaacttaga 7410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 108; Significance: 5e-54; HSPs: 2)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 304 - 463
Target Start/End: Original strand, 1514 - 1673
Alignment:
Q  304 caccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctctttttcaactc 403  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||| ||||||| || |||||||||||| |||||||||| || ||||| ||||||||    
T  1514 caccaagacccatcttagaagcatcacaatacacagcaaatgattccatcggatttggcaaaatcaacactagagctgaagttaacctcttcttcaactc 1613  T
Q  404 ttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactg 463  Q
    |||||||||||||| ||| ||||||||||||||||||| |||||| ||||||||||||||    
T  1614 ttggaaactcttctcacatttagcatcccaaacataagcttgtcctttccgagtcaactg 1673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 184 - 258
Target Start/End: Complemental strand, 3542 - 3469
Alignment:
Q  184 attccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatct 258  Q
    |||||||||||| |||| |||||||| ||||||||||| ||||||| |||| | |||||||||||||||||||||    
T  3542 attccaagtaag-agaacatacaacatcttatgataaatatcatatccaactcataacaattcattcacacatct 3469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 108; Significance: 5e-54; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 296 - 491
Target Start/End: Complemental strand, 54614 - 54420
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||||||||||||| ||||||||||||||||| |  ||| ||||||| |||||| | |||||||||||| ||||||||||||| |||||     
T  54614 aagcacaccaccaagacccatctttgaagcatcacaatacaccaagaacaattcctttggattcagcaaaatcaacactggagctgaagtcaacctcttc 54515  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttagaaaat 491  Q
    |||||||||||||||||||||| ||||||  |||||| ||| || | |||||||||| ||||||||||| ||| ||||||||||||||||||||||    
T  54514 ttcaactcttggaaactcttctcacacttgtcatccc-aacgtacgcttgtcccttctgagtcaactgcatcaatggcaacgccaacttagaaaat 54420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 101; Significance: 7e-50; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 299 - 487
Target Start/End: Original strand, 2623 - 2811
Alignment:
Q  299 cacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctctttttc 398  Q
    |||||||||||| || ||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||| |  |||||| ||| ||||| |||    
T  2623 cacaccaccaagtccaatcttagaagcatcacaatacacaacaaatgattccttcagattcggcaaaatcaacactggcactgaagccaacctcttcttc 2722  T
Q  399 aactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||||||||||||  |||||||||||||||||||  | |||||  |||||| |||||| | ||| ||||||||||||||||||    
T  2723 aactcttggaaactcttctcgcacttagcatcccaaacatgcgcttgtcatttccgactcaactacatcaatggcaacgccaacttaga 2811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 294 - 487
Target Start/End: Complemental strand, 13489 - 13306
Alignment:
Q  294 agaagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctct 393  Q
    ||||||||||  ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||| |||||||| |||| ||||    
T  13489 agaagcacactgccaagacccatcttagaagcatcacaatacagaacaaatgattccttcggattcggcaaaatcaacactagagctgaaatcaacctct 13390  T
Q  394 ttttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    | |||          ||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||| ||| ||||||||||| ||||||    
T  13389 tcttc----------aactcttctcacacttagcatcccaaacataagtttgtcctttctgagtcaactgcatcaatggcaacgccagcttaga 13306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 314 - 426
Target Start/End: Original strand, 1 - 113
Alignment:
Q  314 catcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctctttttcaactcttggaaactc 413  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||| ||||| ||||||||||||||||||    
T  1 catcttagaagcatcacaatacacaacaaacgattcctttggattcggcaaaatcaacactggagctgaagtcaacctcttcttcaactcttggaaactc 100  T
Q  414 ttcttacacttag 426  Q
    |||| ||||||||    
T  101 ttctcacacttag 113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 89; Significance: 1e-42; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 122 - 272
Target Start/End: Complemental strand, 8419 - 8269
Alignment:
Q  122 atatatactttaatcaacat-caactatataatatagctcaacaactccatacactttctcacattccaagtaa-ggagaaaatacaacaccttatgata 219  Q
    |||||||| ||||||||||| |||||||||||||||||| ||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  8419 atatatacattaatcaacattcaactatataatatagct-aacaacttcatacactttctcacaatccaagtaaaggagaaaatacaacaccttatgata 8321  T
Q  220 aacatcatattcaacacctaacaattcattcacacatcttcaattaatcatat 272  Q
    || ||||||||||||||||||||| ||||||||| || ||||  |||||||||    
T  8320 aatatcatattcaacacctaacaa-tcattcacatatattcatgtaatcatat 8269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 176 - 273
Target Start/End: Original strand, 34370 - 34465
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatata 273  Q
    ||||||| |||||||||||| |||| |||||||| |||||||||||  ||||||| ||||   ||||| ||||||||||||||||| ||| |||||||    
T  34370 tttctcatattccaagtaag-agaacatacaacatcttatgataaatttcatatt-aacatacaacaagtcattcacacatcttcatttagtcatata 34465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 88; Significance: 4e-42; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 296 - 487
Target Start/End: Original strand, 6807 - 6977
Alignment:
Q  296 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctcttt 395  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||        
T  6807 aagcacaccaccaagacccatcttagaagcatcacaatacacaacaaacgattccttcggattcggcaaaatcaacactggagctgaggtcaatct---- 6902  T
Q  396 ttcaactcttggaaactcttcttacacttagcatcccaaacataagtttgtcccttccgagtcaactgcgtcattggcaacgccaacttaga 487  Q
                     ||||| |||||| |||| ||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||    
T  6903 -----------------cttctcacacttggcattccaaacataagcttgtcctttccgagtcaactgcgtcaatggcaacgccaacttaga 6977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 453 - 487
Target Start/End: Original strand, 1 - 35
Alignment:
Q  453 cgagtcaactgcgtcattggcaacgccaacttaga 487  Q
    |||||||||||||||| ||||||||||||||||||    
T  1 cgagtcaactgcgtcaatggcaacgccaacttaga 35  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 122 - 237
Target Start/End: Original strand, 11558 - 11675
Alignment:
Q  122 atatatactttaatcaacat-caactatataatatagctcaacaactccatacactttctcacattccaagt-aaggagaaaatacaacaccttatgata 219  Q
    |||||| | ||||||||||| ||||||||||||||| |||||||||| |||||||||||||||| ||||||| |||||||||||| ||||||||||||||    
T  11558 atatatgcattaatcaacattcaactatataatataactcaacaacttcatacactttctcacaatccaagtaaaggagaaaataaaacaccttatgata 11657  T
Q  220 aacatcatattcaacacc 237  Q
    ||||||||||||||||||    
T  11658 aacatcatattcaacacc 11675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 72; Significance: 1e-32; HSPs: 3)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 122 - 236
Target Start/End: Complemental strand, 1453 - 1338
Alignment:
Q  122 atatatactttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagt-aaggagaaaatacaacaccttatgataa 220  Q
    |||||| | ||||||||| |||||||||| |||||| |||||||||||||||| ||||||||| | ||||| |||||||||||||||||| |||||||||    
T  1453 atatatgcattaatcaacgtcaactatatcatatagttcaacaactccatacaatttctcacaattcaagtaaaggagaaaatacaacacattatgataa 1354  T
Q  221 acatcatattcaacac 236  Q
    ||||||||||||||||    
T  1353 acatcatattcaacac 1338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 122 - 236
Target Start/End: Complemental strand, 5833 - 5718
Alignment:
Q  122 atatatactttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagt-aaggagaaaatacaacaccttatgataa 220  Q
    |||||| | ||||||||| |||||||||| |||||| |||||||||||||||| ||||||||| | ||||| |||||||||||||||||| |||||||||    
T  5833 atatatgcattaatcaacgtcaactatatcatatagttcaacaactccatacaatttctcacaattcaagtaaaggagaaaatacaacacattatgataa 5734  T
Q  221 acatcatattcaacac 236  Q
    ||||||||||||||||    
T  5733 acatcatattcaacac 5718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 176 - 272
Target Start/End: Complemental strand, 35944 - 35849
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatat 272  Q
    ||||||| ||||||||||| ||||||||||| |||  ||||||||||||||||||||||||| | ||| ||||||||| |||||||  |||||||||    
T  35944 tttctcatattccaagtaaagagaaaatacaccacactatgataaacatcatattcaacacccagcaa-tcattcacatatcttcatataatcatat 35849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 122 - 239
Target Start/End: Complemental strand, 15040 - 14922
Alignment:
Q  122 atatatactttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaa-ggagaaaatacaacaccttatgataa 220  Q
    |||||| | |||||| ||||||||||||| |||||| |||||||||||||| | ||||||||| | ||||||| |||||||||||||||| |||||||||    
T  15040 atatatgcattaatcgacatcaactatatcatatagttcaacaactccatataatttctcacaattcaagtaaaggagaaaatacaacacattatgataa 14941  T
Q  221 acatcatattcaacaccta 239  Q
    |||||||||||||||||||    
T  14940 acatcatattcaacaccta 14922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 122 - 261
Target Start/End: Complemental strand, 5313 - 5174
Alignment:
Q  122 atatatactttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaa-ggagaaaatacaacaccttatgataa 220  Q
    |||||||| ||| |||||||||||||||| |||||| ||||||||| |||||  ||||||||| | ||| ||| |||||||||||||||| |||||||||    
T  5313 atatatacattattcaacatcaactatatcatatagttcaacaacttcataccatttctcacaattcaattaatggagaaaatacaacacattatgataa 5214  T
Q  221 acatcatattcaacacctaacaattcattcacacatcttca 261  Q
    ||||| |||||||||||| | || ||||||||| |||||||    
T  5213 acatcttattcaacacct-agaaatcattcacatatcttca 5174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1204 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold1204
Description:

Target: scaffold1204; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 135 - 236
Target Start/End: Complemental strand, 1399 - 1297
Alignment:
Q  135 tcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagt-aaggagaaaatacaacaccttatgataaacatcatattcaa 233  Q
    |||||||||||||||| |||||| |||||||||||||| ||||||||||| ||||||| ||||||||||||||||||   |||||||||||| |||||||    
T  1399 tcaacatcaactatatcatatagttcaacaactccatatactttctcacaatccaagtaaaggagaaaatacaacacaccatgataaacatcgtattcaa 1300  T
Q  234 cac 236  Q
    |||    
T  1299 cac 1297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 176 - 294
Target Start/End: Complemental strand, 4059 - 3941
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataac 275  Q
    |||| |||||||||||||| ||| |||||| |||||||||||| |||||||||||||||||||||||| ||| ||| | ||||||| ||||| ||||||     
T  4059 tttcccacattccaagtaaagaggaaataccacaccttatgatgaacatcatattcaacacctaacaagtcactcaaatatcttcatttaataatataaa 3960  T
Q  276 gctaatcacgaaagattta 294  Q
    | || ||||||||||||||    
T  3959 gttattcacgaaagattta 3941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 63; Significance: 4e-27; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 176 - 294
Target Start/End: Original strand, 85330 - 85448
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataac 275  Q
    ||||||| |||| || ||| ||||||||| ||||  | |||||||| ||||||| ||||||||||||||||||||||||||||||| ||| ||| ||||     
T  85330 tttctcatattcaaattaaagagaaaatataacaagtcatgataaatatcatatccaacacctaacaattcattcacacatcttcatttagtcacataag 85429  T
Q  276 gctaatcacgaaagattta 294  Q
    |||||||||||||||||||    
T  85430 gctaatcacgaaagattta 85448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 179 - 290
Target Start/End: Original strand, 26482 - 26595
Alignment:
Q  179 ctcacattccaagtaaggagaaaatacaacaccttatgataa----acatcatattcaacacctaacaattcattcacacatcttcaattaatcatataa 274  Q
    |||| |||||||||||  ||||||||||||||  ||||||||    | ||||||| |||| |||||||||||||||||||||||||| ||| ||||||||    
T  26482 ctcatattccaagtaaa-agaaaatacaacactctatgataattaaatatcatatccaac-cctaacaattcattcacacatcttcatttagtcatataa 26579  T
Q  275 cgctaatcacgaaaga 290  Q
     |||| ||||||||||    
T  26580 ggctagtcacgaaaga 26595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 113
Target Start/End: Original strand, 26394 - 26435
Alignment:
Q  72 catcatcacattgtcatcataatttttaataatcatcaacat 113  Q
    |||||||||||||||||||||||  | |||||||||||||||    
T  26394 catcatcacattgtcatcataatcatcaataatcatcaacat 26435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 122 - 239
Target Start/End: Original strand, 9788 - 9907
Alignment:
Q  122 atatatactttaatcaacatcaactatataatatagctcaacaactccatac-actttctcacattccaagt-aaggagaaaatacaacaccttatgata 219  Q
    |||||| | |||||||||||||||||||| |||||| ||||||||||||||| | ||||||||| | ||||| || ||||||||||||||  ||||| ||    
T  9788 atatatgcattaatcaacatcaactatatcatatagttcaacaactccatacaattttctcacaattcaagtaaaagagaaaatacaacatattatggta 9887  T
Q  220 aacatcatattcaacaccta 239  Q
    ||||||||||||||||||||    
T  9888 aacatcatattcaacaccta 9907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 131 - 293
Target Start/End: Original strand, 762 - 924
Alignment:
Q  131 ttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaa-ggagaaaatacaacaccttatgataaacatcatat 229  Q
    ||||||||||| ||||||||  ||| | ||||||||  |||  ||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||    
T  762 ttaatcaacataaactatatcctatcgttcaacaacatcatgtactttctcacaatccaagtaaaggagaaaatacaacacattatgataaacatcatat 861  T
Q  230 tcaacacctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaagattt 293  Q
    ||||||| |   ||  |||||||| ||| ||| ||| |||||||| |||| |||||||||||||    
T  862 tcaacacat-gtaaagcattcacatatcctcatttagtcatataaggctagtcacgaaagattt 924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 176 - 291
Target Start/End: Complemental strand, 98414 - 98301
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataac 275  Q
    ||||||| |||||||||||| |||| |||||||| ||||||||||| ||||||| |||||  ||||||||||||||||||||| || ||||||||||||     
T  98414 tttctcatattccaagtaag-agaacatacaacatcttatgataaatatcatat-caacatataacaattcattcacacatctacatttaatcatataag 98317  T
Q  276 gctaatcacgaaagat 291  Q
    |||| |||| ||||||    
T  98316 gctagtcacaaaagat 98301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 176 - 291
Target Start/End: Original strand, 84500 - 84615
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataac 275  Q
    ||||||| ||| ||||||| |||||||||||| ||||||||||||| ||||||| |||||  ||| |||||||||||||||||||| ||| |||| |||     
T  84500 tttctcatatttcaagtaaagagaaaatacaataccttatgataaatatcatatccaacatataataattcattcacacatcttcatttagtcatttaag 84599  T
Q  276 gctaatcacgaaagat 291  Q
    |||| |||| ||||||    
T  84600 gctagtcacaaaagat 84615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 176 - 261
Target Start/End: Complemental strand, 2240 - 2156
Alignment:
Q  176 tttctcacattccaagtaa-ggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttca 261  Q
    ||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||    
T  2240 tttctcacaatccaagtaaaggagaaaatacaacaccttatgat-aacatcatattcaacacctaacaa-tcattcacatatcttca 2156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 196 - 291
Target Start/End: Original strand, 3637 - 3730
Alignment:
Q  196 gagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaagat 291  Q
    |||||||||||||||||||||||||| ||||||| |||||  |||| |||||||||||||||||| |||| |||||||| |||| |||||||||||    
T  3637 gagaaaatacaacaccttatgataaatatcatatccaacatataac-attcattcacacatcttc-attagtcatataaggctagtcacgaaagat 3730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 176 - 291
Target Start/End: Complemental strand, 23719 - 23605
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataac 275  Q
    ||||||| |||||||||||| |||| |||||||| ||||||||||| ||||||| |||||  |||||||||||||||| |||| || ||| ||||| ||     
T  23719 tttctcatattccaagtaag-agaacatacaacatcttatgataaatatcatatccaacatataacaattcattcacatatctccatttagtcatacaag 23621  T
Q  276 gctaatcacgaaagat 291  Q
    |||| |||||||||||    
T  23620 gctagtcacgaaagat 23605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 188 - 291
Target Start/End: Complemental strand, 24845 - 24742
Alignment:
Q  188 caagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaa 287  Q
    ||||||| ||||||||||||||||| |||||||| || ||||||||||  ||||||| |||||||||||| | | ||| |||||||| |||| |||||||    
T  24845 caagtaacgagaaaatacaacacctcatgataaatattatattcaacatataacaatccattcacacatcattatttagtcatataaggctagtcacgaa 24746  T
Q  288 agat 291  Q
    ||||    
T  24745 agat 24742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 122 - 204
Target Start/End: Complemental strand, 12282 - 12200
Alignment:
Q  122 atatatactttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaaggagaaaata 204  Q
    |||||| | |||||||||||||||||||| |||||| ||||||| |||||||| ||||||||| | |||||||||||||||||    
T  12282 atatatgcattaatcaacatcaactatatcatatagttcaacaattccatacaatttctcacaattcaagtaaggagaaaata 12200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 176 - 258
Target Start/End: Original strand, 32489 - 32570
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatct 258  Q
    |||||||||||| ||||||| |||| |||||||| || |||||||| |||||||||||||| |||||||||||||||||||||    
T  32489 tttctcacattctaagtaag-agaacatacaacatctcatgataaatatcatattcaacacataacaattcattcacacatct 32570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 177 - 294
Target Start/End: Original strand, 130809 - 130925
Alignment:
Q  177 ttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacg 276  Q
    |||||| ||| |||||||| |||||||||||||||  |||||||| ||||||| |||||  ||||||||||||| |||||||||| ||| ||||| || |    
T  130809 ttctcatatttcaagtaag-agaaaatacaacaccccatgataaatatcatatccaacaattaacaattcattcccacatcttcatttagtcatacaaag 130907  T
Q  277 ctaatcacgaaagattta 294  Q
    ||| ||||||| ||||||    
T  130908 ctagtcacgaaggattta 130925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 176 - 292
Target Start/End: Complemental strand, 6393 - 6278
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataac 275  Q
    ||||||| ||| ||||||| ||||||| |||||| |||||||| || ||||||| ||||| ||||||||||| ||| ||||||||| ||| ||| ||||     
T  6393 tttctcatattgcaagtaacgagaaaacacaacatcttatgatcaatatcatatccaacatctaacaattca-tcatacatcttcacttagtcacataag 6295  T
Q  276 gctaatcacgaaagatt 292  Q
    |||| ||||||||||||    
T  6294 gctagtcacgaaagatt 6278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 47; Significance: 1e-17; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 174 - 284
Target Start/End: Complemental strand, 98281 - 98172
Alignment:
Q  174 actttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatata 273  Q
    |||||| |||||||||||||| |||||||||||||||||||| || |||||| ||| |||  | |||||||| |||||||  |||||| ||||||| |||    
T  98281 actttcccacattccaagtaacgagaaaatacaacaccttatcatgaacatcgtatccaatgcttaacaatt-attcacatctcttcacttaatcaaata 98183  T
Q  274 acgctaatcac 284  Q
    | |||||||||    
T  98182 aagctaatcac 98172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 131 - 288
Target Start/End: Original strand, 68386 - 68540
Alignment:
Q  131 ttaatcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatatt 230  Q
    ||||||||| ||||||| || || ||| |  || |||||| ||| ||||||| ||| |||||||| |||| |||||||| ||||||||||| |||||| |    
T  68386 ttaatcaacttcaactacatcatgtagtttcaccactccaaaca-tttctcatatttcaagtaag-agaacatacaacatcttatgataaatatcata-t 68482  T
Q  231 caacacctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaaa 288  Q
    |||||  ||||||| |||||||||| ||||| ||| ||||| || |||| ||||||||    
T  68483 caacatgtaacaatccattcacacaccttcatttagtcatacaaggctagtcacgaaa 68540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 176 - 261
Target Start/End: Complemental strand, 255532 - 255448
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttca 261  Q
    ||||||||| | ||||| ||| ||||||||| |||  |||||||||||||||||||||||||| | || ||||||||| |||||||    
T  255532 tttctcacaattcaagtgaggggaaaatacaccacagtatgataaacatcatattcaacacct-agaaatcattcacatatcttca 255448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 330 - 437
Target Start/End: Original strand, 8571 - 8678
Alignment:
Q  330 caatacacaacaaacgattccttcggattcggaaaaatcaacacttgagctgaagtcaatctctttttcaactcttggaaactcttcttacacttagcat 429  Q
    ||||||||||||||  ||||||| |||||||||||| |||||||| | | |||  |||| ||| | |||||||||||||||||||  | |||||||| ||    
T  8571 caatacacaacaaaaaattcctttggattcggaaaagtcaacactggcgatgacatcaacctcctcttcaactcttggaaactctcttcacacttagaat 8670  T
Q  430 cccaaaca 437  Q
    ||||||||    
T  8671 cccaaaca 8678  T

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Target: scaffold0026 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 258
Target Start/End: Complemental strand, 91101 - 91020
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatct 258  Q
    ||||||| |||||| ||||| | || |||||||| ||||||||||| ||||||| |||||| |||||||||||||||||||||    
T  91101 tttctcatattccaggtaagaa-aacatacaacatcttatgataaatatcatatccaacacataacaattcattcacacatct 91020  T

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Target: scaffold0357 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 198 - 274
Target Start/End: Original strand, 6694 - 6769
Alignment:
Q  198 gaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataa 274  Q
    |||||||||||||||||||||||| ||||||||||| |||| |||||| | ||||| ||||||| | ||||||||||    
T  6694 gaaaatacaacaccttatgataaatatcatattcaagacctcacaatt-actcacatatcttcattcaatcatataa 6769  T

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Target: scaffold0346 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 208 - 287
Target Start/End: Complemental strand, 13888 - 13809
Alignment:
Q  208 caccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataacgctaatcacgaa 287  Q
    |||||||||||||| ||||||| ||||| ||||||||| ||||||||||| ||| |||  ||||||| |||| |||||||    
T  13888 caccttatgataaatatcatatccaacatctaacaatttattcacacatcgtcatttagacatataaggctagtcacgaa 13809  T

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Target: scaffold0174 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 134 - 240
Target Start/End: Complemental strand, 21264 - 21158
Alignment:
Q  134 atcaacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaa 233  Q
    ||||||||| ||| ||| |||||  || |||||  |||||  ||||||||| | ||||| ||||||||||||| |||  ||||||||| |||||||||||    
T  21264 atcaacatcgactttatcatataattccacaacatcatactatttctcacaattcaagtgaggagaaaatacatcacagtatgataaaaatcatattcaa 21165  T
Q  234 cacctaa 240  Q
    |||||||    
T  21164 cacctaa 21158  T

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Target: scaffold0051 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 176 - 258
Target Start/End: Original strand, 59478 - 59559
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatct 258  Q
    ||||||| |||||||||||| | || |||||||  ||||||||||| ||||||| |||||| |||||| ||||||||||||||    
T  59478 tttctcatattccaagtaag-ataacatacaacgtcttatgataaatatcatatccaacacataacaactcattcacacatct 59559  T

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Target: scaffold0231 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 136 - 271
Target Start/End: Complemental strand, 14142 - 14006
Alignment:
Q  136 caacatcaactatataatatagctcaacaactccatacactttctcacattccaagtaa-ggagaaaa-tacaacaccttatgataaacatcatattcaa 233  Q
    ||||||||||||||| |||||  ||||||||  || ||  ||||||||| ||||| ||| |||||||| |||  ||  ||||||||||||||||||||||    
T  14142 caacatcaactatatcatataattcaacaacatcacactatttctcacaatccaaataaaggagaaaaatacttcaaattatgataaacatcatattcaa 14043  T
Q  234 cacctaacaattcattcacacatcttcaattaatcata 271  Q
    |||||| ||| |||| |||| |||||||  ||||||||    
T  14042 cacctagcaa-tcatccacatatcttcatataatcata 14006  T

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Target: scaffold0521 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 202 - 273
Target Start/End: Original strand, 7519 - 7589
Alignment:
Q  202 atacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatata 273  Q
    |||||||| |||||||||||||||||| ||||||   ||||| ||||||||||||||||| ||| |||||||    
T  7519 atacaacatcttatgataaacatcata-tcaacatacaacaagtcattcacacatcttcatttagtcatata 7589  T

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Target: scaffold0125 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 34648 - 34707
Alignment:
Q  177 ttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacac 236  Q
    |||||| ||||||||||||  ||||||||| ||||||| ||||||||||| |||||||||    
T  34648 ttctcatattccaagtaagaggaaaatacatcaccttaagataaacatcacattcaacac 34707  T

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Target: scaffold0010 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 176 - 291
Target Start/End: Original strand, 30034 - 30147
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataac 275  Q
    ||||||| |||||||||||| |||| |||||||| || |||||||| ||||||| |||    |||||||||| ||| ||||||||| ||| ||||||||     
T  30034 tttctcatattccaagtaag-agaacatacaacatctcatgataaatatcatat-caagctataacaattcactcatacatcttcatttagtcatataag 30131  T
Q  276 gctaatcacgaaagat 291  Q
    | || |||||||||||    
T  30132 gttagtcacgaaagat 30147  T

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Target: scaffold0006 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 291
Target Start/End: Complemental strand, 198612 - 198497
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacaca--tcttcaattaatcatata 273  Q
    ||||||| |||||||||||| |||| ||||||||  |||||||||| ||||||| |||||   |||||||||||||||||  ||||||  || |||||||    
T  198612 tttctcatattccaagtaag-agaacatacaacattttatgataaatatcatat-caacatacaacaattcattcacacacatcttcatctagtcatata 198515  T
Q  274 acgctaatcacgaaagat 291  Q
    | |||| | |||||||||    
T  198514 aggctagttacgaaagat 198497  T

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Target: scaffold0207 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 294 - 335
Target Start/End: Original strand, 19678 - 19719
Alignment:
Q  294 agaagcacaccaccaagacccatcttagaagcatcacaatac 335  Q
    ||||||||||||||||||||||||  ||||||||||||||||    
T  19678 agaagcacaccaccaagacccatcaaagaagcatcacaatac 19719  T

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Target: scaffold0047 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 238 - 287
Target Start/End: Complemental strand, 1293 - 1244
Alignment:
Q  238 taacaattcattcacacatcttcaattaatcatataacgctaatcacgaa 287  Q
    |||||||||||||||||||||||| ||| |||||||| |||| |||||||    
T  1293 taacaattcattcacacatcttcatttagtcatataaggctactcacgaa 1244  T

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Target: scaffold0047; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 176 - 244
Target Start/End: Original strand, 76006 - 76075
Alignment:
Q  176 tttctcacattccaagtaa-ggagaaaatacaacaccttatgataaacatcatattcaacacctaacaat 244  Q
    ||||||||| ||||| ||| ||| |||||||  ||| ||||||||||||||||||||| |||||||||||    
T  76006 tttctcacaatccaaataaaggataaaatacttcacattatgataaacatcatattcatcacctaacaat 76075  T

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Target: scaffold0456 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 292
Target Start/End: Complemental strand, 12194 - 12080
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataac 275  Q
    ||||||| ||| |||||||| ||||||||||||| || ||||| || ||||||| ||||| ||||||| ||| ||| ||| || || ||| ||||||||     
T  12194 tttctcatattacaagtaag-agaaaatacaacatctcatgattaatatcatatccaacatctaacaaatca-tcaaacaactgcatttagtcatataag 12097  T
Q  276 gctaatcacgaaagatt 292  Q
    |||| |||| |||||||    
T  12096 gctagtcacaaaagatt 12080  T

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Target: scaffold0456; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 258
Target Start/End: Original strand, 13092 - 13172
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatct 258  Q
    ||||||| |||||||| ||| ||||||||||||| || |||||||||||||||| |||||  |||| ||||| ||||| ||||    
T  13092 tttctcatattccaagcaag-agaaaatacaacatct-atgataaacatcatatccaacatgtaaccattcaatcacatatct 13172  T

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Target: scaffold0507 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 291
Target Start/End: Complemental strand, 4630 - 4518
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataac 275  Q
    ||||||| |||||||| ||| ||||||||||||| || |||||||||||||||| |||||  |||| ||||| ||||| ||||  | ||| |||||| |     
T  4630 tttctcatattccaagcaag-agaaaatacaacatct-atgataaacatcatatccaacatgtaaccattcaatcacatatctctacttagtcatat-ag 4534  T
Q  276 gctaatcacgaaagat 291  Q
    |||| |||||||||||    
T  4533 gctagtcacgaaagat 4518  T

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Target: scaffold1957 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1957
Description:

Target: scaffold1957; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 244
Target Start/End: Complemental strand, 1014 - 981
Alignment:
Q  211 cttatgataaacatcatattcaacacctaacaat 244  Q
    |||||||||||||| |||||||||||||||||||    
T  1014 cttatgataaacattatattcaacacctaacaat 981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 292
Target Start/End: Original strand, 10516 - 10630
Alignment:
Q  176 tttctcacattccaagtaaggagaaaatacaacaccttatgataaacatcatattcaacacctaacaattcattcacacatcttcaattaatcatataac 275  Q
    ||||||| ||| |||||||| ||||||||||||| || | ||| || ||| ||| ||||| ||||||| ||| ||||||| ||||| ||| ||| ||||     
T  10516 tttctcatattacaagtaag-agaaaatacaacatctcacgattaatatcctatccaacatctaacaaatca-tcacacaacttcatttagtcacataag 10613  T
Q  276 gctaatcacgaaagatt 292  Q
    |||| |||| |||||||    
T  10614 gctagtcactaaagatt 10630  T

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Target: scaffold0016 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 167431 - 167383
Alignment:
Q  179 ctcacattccaagtaaggag-aaaatacaacaccttatgataaacatca 226  Q
    |||||||||||||||| ||| |||||||| ||||||| |||||||||||    
T  167431 ctcacattccaagtaaagaggaaaatacatcaccttaagataaacatca 167383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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