View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0758_low_28 (Length: 323)
Name: NF0758_low_28
Description: NF0758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0758_low_28 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 89 - 323
Target Start/End: Complemental strand, 14880387 - 14880153
Alignment:
| Q |
89 |
catcatcaaggcaagtatgtgatcttcttctacatgtatccaagaacaaaaaagtggagtttgacaagatgaagatggattcgtacaactgaaattattt |
188 |
Q |
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| T |
14880387 |
catcatcaaggcaagtatgtgatcttcttctacatgtatcctagaacaaaaaagtggagtttgacaagatgaagatggattcgtacaactgaaattattt |
14880288 |
T |
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| Q |
189 |
ctcctttggattgatgaaaaagtggctttaaataacattgatttttactggcttttgtttaatgtttctgttcttgattttatttagttattgtagtatt |
288 |
Q |
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| T |
14880287 |
ctcctttggattgatgagaaagtggctttaaataacattgatttttactggcttttgtttaatgtttctgttcttgattttatttagttattgtagtatt |
14880188 |
T |
|
| Q |
289 |
tcaatttatatgtcattccaatactacttgaatat |
323 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
14880187 |
tcaatttatatgtcattccaatactacttgaatat |
14880153 |
T |
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