View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0758_low_30 (Length: 319)
Name: NF0758_low_30
Description: NF0758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0758_low_30 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 206; Significance: 1e-112; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 102 - 319
Target Start/End: Complemental strand, 28664442 - 28664225
Alignment:
| Q |
102 |
tatatttatattacatcaaatactatattgcaagtcaatcatcatgcatgatacaacttgataatacactcacaaacttcaaaggtgaattattttctat |
201 |
Q |
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| T |
28664442 |
tatatttatattacatcaaatactatattgcaagtcaatcatcatgcatgatacaacttgataatacactcacaaacttcaaaggtgaattattttctat |
28664343 |
T |
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| Q |
202 |
tacctttgtcggctgatcaagtaacatatctgtgggaacaactaatatacgaaagtacaagcatagaagtcttagcccgttggcattattaattattcta |
301 |
Q |
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| T |
28664342 |
tgcctttgtcggctgatcaagtaaaatatctgtgggaacaactaatatacgaaagtacaagcataaaagtcttagcccgttggcattattaattattcta |
28664243 |
T |
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| Q |
302 |
tatatgaaatgcaaatac |
319 |
Q |
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| T |
28664242 |
tatatgaaatgcaaatac |
28664225 |
T |
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