View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0758_low_39 (Length: 308)

Name: NF0758_low_39
Description: NF0758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0758_low_39
NF0758_low_39
[»] chr6 (57 HSPs)
chr6 (1-246)||(19303202-19303447)
chr6 (1-244)||(29060757-29061000)
chr6 (1-246)||(18409488-18409733)
chr6 (1-241)||(20593993-20594233)
chr6 (1-246)||(22779888-22780133)
chr6 (1-246)||(17287457-17287702)
chr6 (1-246)||(20637955-20638189)
chr6 (1-147)||(28496134-28496280)
chr6 (1-226)||(18821491-18821705)
chr6 (1-242)||(25629016-25629257)
chr6 (1-243)||(20360632-20360863)
chr6 (1-147)||(29808544-29808691)
chr6 (1-221)||(18456955-18457174)
chr6 (1-142)||(1561622-1561763)
chr6 (1-183)||(16920305-16920476)
chr6 (1-146)||(21939699-21939843)
chr6 (1-225)||(25611384-25611608)
chr6 (1-195)||(22831768-22831951)
chr6 (1-146)||(4667874-4668019)
chr6 (1-144)||(19652512-19652655)
chr6 (1-146)||(4185484-4185629)
chr6 (1-183)||(11185780-11185951)
chr6 (12-246)||(25603057-25603291)
chr6 (1-146)||(15894091-15894237)
chr6 (1-146)||(4189271-4189416)
chr6 (1-146)||(4674721-4674866)
chr6 (1-145)||(27332945-27333089)
chr6 (1-145)||(27393685-27393829)
chr6 (1-79)||(31155059-31155137)
chr6 (1-224)||(25644559-25644782)
chr6 (1-72)||(23019796-23019867)
chr6 (1-90)||(22334543-22334632)
chr6 (1-146)||(22080398-22080543)
chr6 (3-71)||(20109605-20109673)
chr6 (13-71)||(31164531-31164589)
chr6 (94-146)||(25641939-25641991)
chr6 (12-71)||(22331803-22331862)
chr6 (111-146)||(23990218-23990253)
chr6 (12-70)||(1538628-1538686)
chr6 (12-70)||(1544727-1544785)
chr6 (3-69)||(17106180-17106246)
chr6 (3-73)||(19023837-19023907)
chr6 (3-69)||(20224412-20224478)
chr6 (3-69)||(22118396-22118462)
chr6 (2-72)||(25956283-25956353)
chr6 (3-65)||(33443517-33443579)
chr6 (3-69)||(35008618-35008684)
chr6 (94-143)||(15041306-15041355)
chr6 (13-70)||(16372223-16372280)
chr6 (12-56)||(14099005-14099049)
chr6 (12-56)||(14472648-14472692)
chr6 (94-146)||(16741503-16741555)
chr6 (94-146)||(16924635-16924687)
chr6 (94-146)||(16929350-16929402)
chr6 (176-224)||(18453419-18453467)
chr6 (94-146)||(18955520-18955572)
chr6 (94-146)||(23657177-23657229)
[»] chr4 (56 HSPs)
chr4 (1-244)||(14038865-14039109)
chr4 (3-246)||(15091111-15091355)
chr4 (1-246)||(44053044-44053289)
chr4 (1-246)||(16377183-16377429)
chr4 (1-224)||(22636671-22636894)
chr4 (1-224)||(44928584-44928807)
chr4 (1-183)||(7798975-7799157)
chr4 (1-224)||(3096880-3097092)
chr4 (1-224)||(12902994-12903205)
chr4 (1-240)||(7089098-7089326)
chr4 (1-224)||(14052974-14053186)
chr4 (1-224)||(17047745-17047956)
chr4 (1-220)||(44102451-44102669)
chr4 (1-246)||(16239653-16239876)
chr4 (1-144)||(16596963-16597105)
chr4 (1-146)||(15552129-15552273)
chr4 (1-146)||(24029057-24029201)
chr4 (1-146)||(13812470-13812614)
chr4 (3-146)||(22633876-22634018)
chr4 (1-146)||(20156951-20157095)
chr4 (84-223)||(7893938-7894077)
chr4 (1-220)||(21815293-21815511)
chr4 (3-235)||(15464592-15464825)
chr4 (1-110)||(6190783-6190893)
chr4 (1-147)||(21814964-21815109)
chr4 (1-147)||(21818386-21818531)
chr4 (2-146)||(8846689-8846834)
chr4 (1-147)||(12774313-12774458)
chr4 (3-224)||(52242856-52243077)
chr4 (105-240)||(23374125-23374259)
chr4 (59-146)||(3332201-3332287)
chr4 (1-72)||(39705949-39706020)
chr4 (1-146)||(15099665-15099810)
chr4 (1-69)||(43198249-43198317)
chr4 (12-56)||(17046721-17046765)
chr4 (1-72)||(15868296-15868367)
chr4 (1-72)||(15190706-15190777)
chr4 (3-72)||(13436-13505)
chr4 (12-71)||(14685534-14685593)
chr4 (1-50)||(13844950-13844999)
chr4 (7-71)||(14679325-14679389)
chr4 (1-72)||(12287794-12287865)
chr4 (12-71)||(23838796-23838855)
chr4 (1-44)||(32851868-32851911)
chr4 (12-70)||(386038-386096)
chr4 (140-226)||(6190697-6190782)
chr4 (12-70)||(7900855-7900913)
chr4 (12-70)||(15321778-15321836)
chr4 (3-69)||(17333749-17333815)
chr4 (3-45)||(32306582-32306624)
chr4 (1-71)||(40471837-40471907)
chr4 (12-70)||(51493502-51493560)
chr4 (1-70)||(40478511-40478580)
chr4 (3-72)||(53081760-53081829)
chr4 (12-56)||(16956334-16956378)
chr4 (3-71)||(46640043-46640111)
[»] chr8 (50 HSPs)
chr8 (1-246)||(6759471-6759717)
chr8 (1-246)||(16092002-16092247)
chr8 (1-246)||(28648705-28648950)
chr8 (1-246)||(18878898-18879143)
chr8 (1-246)||(22875280-22875525)
chr8 (1-246)||(21923589-21923834)
chr8 (1-246)||(22626950-22627195)
chr8 (1-246)||(20536423-20536668)
chr8 (1-220)||(23406622-23406841)
chr8 (1-224)||(41598421-41598644)
chr8 (1-246)||(18818071-18818315)
chr8 (1-246)||(23648768-23649013)
chr8 (1-146)||(5865938-5866082)
chr8 (1-146)||(17141229-17141373)
chr8 (1-224)||(25362812-25363024)
chr8 (1-183)||(21918671-21918843)
chr8 (1-125)||(7373084-7373209)
chr8 (1-146)||(21249697-21249841)
chr8 (1-146)||(21255535-21255679)
chr8 (1-146)||(21491308-21491452)
chr8 (1-224)||(31971492-31971704)
chr8 (1-224)||(16199319-16199530)
chr8 (1-72)||(45130692-45130763)
chr8 (11-89)||(21674076-21674155)
chr8 (1-146)||(26355359-26355504)
chr8 (1-146)||(39834147-39834292)
chr8 (1-72)||(19801088-19801159)
chr8 (1-72)||(38854912-38854983)
chr8 (142-246)||(7372985-7373088)
chr8 (1-75)||(6520754-6520828)
chr8 (3-73)||(20499048-20499118)
chr8 (1-69)||(21414888-21414956)
chr8 (3-73)||(37116812-37116882)
chr8 (11-72)||(23760511-23760572)
chr8 (3-71)||(17266579-17266647)
chr8 (134-201)||(45130793-45130859)
chr8 (3-73)||(982989-983059)
chr8 (11-72)||(24353489-24353550)
chr8 (3-71)||(40492438-40492506)
chr8 (1-44)||(13507670-13507713)
chr8 (1-44)||(13597202-13597245)
chr8 (12-71)||(20527812-20527871)
chr8 (11-45)||(17085770-17085804)
chr8 (12-70)||(18865695-18865753)
chr8 (170-224)||(22963249-22963303)
chr8 (3-69)||(22996313-22996379)
chr8 (3-72)||(2418462-2418531)
chr8 (1-70)||(16882845-16882914)
chr8 (3-72)||(17439092-17439161)
chr8 (94-146)||(22010435-22010487)
[»] chr5 (55 HSPs)
chr5 (7-246)||(9078167-9078406)
chr5 (1-246)||(21985808-21986053)
chr5 (1-246)||(25421747-25421992)
chr5 (1-246)||(1096682-1096927)
chr5 (1-246)||(25431609-25431854)
chr5 (1-246)||(24529435-24529681)
chr5 (1-246)||(13095709-13095954)
chr5 (1-246)||(24493783-24494028)
chr5 (1-246)||(13025525-13025770)
chr5 (1-246)||(23390157-23390402)
chr5 (1-224)||(11580906-11581129)
chr5 (1-224)||(36154489-36154712)
chr5 (1-201)||(21292642-21292831)
chr5 (1-246)||(8286514-8286748)
chr5 (1-146)||(22119854-22119998)
chr5 (1-146)||(19660498-19660643)
chr5 (1-240)||(22075240-22075468)
chr5 (1-146)||(24766998-24767142)
chr5 (3-170)||(22107047-22107204)
chr5 (1-142)||(21565863-21566004)
chr5 (3-219)||(22144292-22144508)
chr5 (1-146)||(22959194-22959339)
chr5 (1-146)||(21871232-21871377)
chr5 (1-146)||(21875512-21875657)
chr5 (1-141)||(19669219-19669360)
chr5 (1-171)||(21329156-21329326)
chr5 (2-171)||(5888837-5889006)
chr5 (1-72)||(21498678-21498749)
chr5 (3-69)||(20026526-20026592)
chr5 (4-73)||(22177807-22177876)
chr5 (6-70)||(41294112-41294176)
chr5 (12-71)||(21294947-21295006)
chr5 (1-72)||(21741204-21741275)
chr5 (12-70)||(15441638-15441696)
chr5 (12-70)||(25406789-25406847)
chr5 (13-71)||(25535351-25535409)
chr5 (3-45)||(26732421-26732463)
chr5 (3-45)||(26740234-26740276)
chr5 (1-70)||(17284430-17284499)
chr5 (105-154)||(21501919-21501968)
chr5 (12-69)||(22588459-22588516)
chr5 (13-70)||(23336973-23337030)
chr5 (3-44)||(25574056-25574097)
chr5 (3-44)||(25575249-25575290)
chr5 (3-44)||(25576442-25576483)
chr5 (3-72)||(26011697-26011766)
chr5 (94-146)||(123062-123114)
chr5 (94-146)||(19472476-19472528)
chr5 (12-56)||(19992261-19992305)
chr5 (107-147)||(20026706-20026746)
chr5 (94-146)||(20805858-20805910)
chr5 (12-56)||(22334501-22334545)
chr5 (94-146)||(23201680-23201732)
chr5 (94-146)||(23535346-23535398)
chr5 (94-146)||(31342414-31342466)
[»] chr3 (71 HSPs)
chr3 (1-246)||(14973069-14973314)
chr3 (1-246)||(18438749-18438994)
chr3 (3-246)||(40213384-40213627)
chr3 (1-246)||(14572803-14573048)
chr3 (1-246)||(25476046-25476291)
chr3 (1-246)||(11424424-11424669)
chr3 (1-246)||(14576494-14576739)
chr3 (1-246)||(17488071-17488317)
chr3 (1-246)||(26687102-26687347)
chr3 (10-246)||(13442489-13442725)
chr3 (1-222)||(17247947-17248168)
chr3 (1-246)||(17499553-17499799)
chr3 (1-246)||(20698108-20698342)
chr3 (1-246)||(23083022-23083267)
chr3 (1-224)||(53070360-53070582)
chr3 (1-146)||(12340068-12340212)
chr3 (3-146)||(12852027-12852169)
chr3 (1-142)||(9513228-9513370)
chr3 (1-142)||(9521203-9521345)
chr3 (13-146)||(14665921-14666053)
chr3 (13-146)||(14669076-14669208)
chr3 (13-146)||(14735434-14735566)
chr3 (1-246)||(30030054-30030288)
chr3 (1-146)||(13209989-13210133)
chr3 (1-147)||(12933971-12934117)
chr3 (1-90)||(14179693-14179782)
chr3 (1-147)||(32307983-32308128)
chr3 (1-116)||(4588476-4588590)
chr3 (63-224)||(43841169-43841330)
chr3 (1-146)||(16097645-16097790)
chr3 (1-147)||(1644344-1644489)
chr3 (1-143)||(49389305-49389446)
chr3 (1-147)||(49667745-49667890)
chr3 (1-160)||(12399506-12399655)
chr3 (1-224)||(42386648-42386871)
chr3 (1-67)||(43842572-43842638)
chr3 (3-147)||(324549-324693)
chr3 (1-214)||(2050862-2051073)
chr3 (1-72)||(16104169-16104240)
chr3 (1-59)||(17247181-17247239)
chr3 (132-240)||(16796768-16796875)
chr3 (1-143)||(14234809-14234950)
chr3 (3-224)||(52523390-52523611)
chr3 (1-50)||(12171778-12171827)
chr3 (1-136)||(16809724-16809845)
chr3 (1-72)||(1465070-1465141)
chr3 (1-72)||(15471313-15471384)
chr3 (3-72)||(22109938-22110007)
chr3 (1-69)||(23275133-23275201)
chr3 (1-72)||(14501588-14501659)
chr3 (3-44)||(43927597-43927638)
chr3 (3-72)||(45797632-45797701)
chr3 (1-72)||(605952-606023)
chr3 (12-71)||(839609-839668)
chr3 (1-72)||(12378385-12378456)
chr3 (1-72)||(23412834-23412905)
chr3 (12-71)||(24188140-24188199)
chr3 (12-71)||(55149341-55149400)
chr3 (3-45)||(316612-316654)
chr3 (3-69)||(9578070-9578136)
chr3 (3-69)||(21837892-21837958)
chr3 (1-70)||(15691950-15692019)
chr3 (11-68)||(23318333-23318390)
chr3 (1-70)||(23704441-23704510)
chr3 (1-70)||(23722897-23722966)
chr3 (1-70)||(23741353-23741422)
chr3 (3-72)||(37250775-37250844)
chr3 (1-70)||(41201470-41201539)
chr3 (12-56)||(4291150-4291194)
chr3 (12-56)||(17710275-17710319)
chr3 (12-56)||(41092030-41092074)
[»] chr1 (55 HSPs)
chr1 (2-246)||(50209875-50210119)
chr1 (2-246)||(34509995-34510239)
chr1 (1-246)||(22532484-22532729)
chr1 (1-225)||(433243-433467)
chr1 (1-224)||(20135424-20135647)
chr1 (1-246)||(22354233-22354478)
chr1 (1-240)||(27250401-27250629)
chr1 (1-246)||(22355846-22356080)
chr1 (1-246)||(22357532-22357766)
chr1 (1-240)||(20846891-20847119)
chr1 (1-146)||(20918917-20919061)
chr1 (1-240)||(21026901-21027129)
chr1 (3-183)||(38801065-38801234)
chr1 (1-169)||(33681301-33681469)
chr1 (1-147)||(21754350-21754495)
chr1 (1-146)||(20091135-20091281)
chr1 (1-174)||(52927642-52927815)
chr1 (4-146)||(20248592-20248734)
chr1 (1-70)||(22921528-22921597)
chr1 (1-81)||(22238009-22238089)
chr1 (1-72)||(21162117-21162188)
chr1 (1-47)||(21301199-21301245)
chr1 (1-146)||(28194109-28194254)
chr1 (106-224)||(26065176-26065295)
chr1 (1-72)||(43697749-43697820)
chr1 (3-73)||(35260718-35260788)
chr1 (6-72)||(35981352-35981418)
chr1 (3-72)||(21895895-21895964)
chr1 (170-222)||(16758890-16758942)
chr1 (1-73)||(16759114-16759186)
chr1 (122-224)||(35260861-35260964)
chr1 (1-72)||(41049629-41049700)
chr1 (3-69)||(16381632-16381698)
chr1 (14-72)||(26065383-26065441)
chr1 (3-72)||(16367873-16367942)
chr1 (105-170)||(21162056-21162121)
chr1 (3-72)||(21861157-21861226)
chr1 (12-71)||(20524899-20524958)
chr1 (1-72)||(21342537-21342608)
chr1 (1-72)||(21347402-21347473)
chr1 (12-71)||(21438157-21438216)
chr1 (12-71)||(23763574-23763633)
chr1 (12-70)||(19063884-19063942)
chr1 (12-70)||(19111774-19111832)
chr1 (3-69)||(27652808-27652874)
chr1 (3-69)||(48521036-48521102)
chr1 (3-45)||(52940464-52940506)
chr1 (3-72)||(16093479-16093548)
chr1 (105-146)||(20637165-20637206)
chr1 (11-72)||(50687057-50687118)
chr1 (170-222)||(21342332-21342384)
chr1 (170-222)||(21347197-21347249)
chr1 (94-146)||(45310123-45310175)
chr1 (1-69)||(50613701-50613769)
chr1 (1-69)||(50621529-50621597)
[»] scaffold0122 (2 HSPs)
scaffold0122 (1-246)||(25726-25971)
scaffold0122 (1-246)||(33155-33401)
[»] chr7 (57 HSPs)
chr7 (1-246)||(38227695-38227940)
chr7 (2-246)||(3564026-3564270)
chr7 (1-246)||(15143698-15143943)
chr7 (1-246)||(9509404-9509649)
chr7 (1-246)||(12699047-12699292)
chr7 (1-224)||(44116742-44116964)
chr7 (1-224)||(17061621-17061844)
chr7 (1-240)||(16385919-16386147)
chr7 (1-146)||(28504962-28505106)
chr7 (1-201)||(40443649-40443837)
chr7 (1-224)||(12756378-12756600)
chr7 (1-224)||(27847505-27847717)
chr7 (1-142)||(15754548-15754689)
chr7 (1-146)||(18302494-18302638)
chr7 (1-142)||(39267307-39267447)
chr7 (1-146)||(9751211-9751355)
chr7 (1-146)||(34201099-34201243)
chr7 (1-146)||(2831967-2832110)
chr7 (1-240)||(26212217-26212445)
chr7 (1-147)||(810790-810936)
chr7 (3-224)||(12255454-12255675)
chr7 (2-146)||(44014489-44014633)
chr7 (112-243)||(10589256-10589386)
chr7 (1-174)||(22073203-22073376)
chr7 (3-222)||(2279781-2280000)
chr7 (11-174)||(16056615-16056778)
chr7 (1-68)||(47832201-47832268)
chr7 (1-171)||(68036-68206)
chr7 (1-201)||(16219377-16219578)
chr7 (1-50)||(11995719-11995768)
chr7 (11-72)||(16324395-16324456)
chr7 (1-50)||(18006052-18006101)
chr7 (1-73)||(2529638-2529710)
chr7 (4-72)||(14045213-14045281)
chr7 (4-72)||(14355243-14355311)
chr7 (1-69)||(21064823-21064891)
chr7 (1-72)||(9389356-9389427)
chr7 (3-69)||(9177252-9177318)
chr7 (14-72)||(12901794-12901852)
chr7 (4-72)||(1867650-1867718)
chr7 (74-146)||(11995764-11995835)
chr7 (4-71)||(14036664-14036731)
chr7 (4-71)||(14346694-14346761)
chr7 (12-71)||(14953560-14953619)
chr7 (12-71)||(14959526-14959585)
chr7 (12-71)||(26420340-26420399)
chr7 (12-71)||(44408043-44408102)
chr7 (3-45)||(11768526-11768568)
chr7 (3-69)||(17017054-17017120)
chr7 (170-224)||(17017297-17017351)
chr7 (14-71)||(11547953-11548010)
chr7 (14-71)||(11554549-11554606)
chr7 (3-44)||(15008107-15008148)
chr7 (1-70)||(20702664-20702733)
chr7 (1-70)||(32768038-32768107)
chr7 (12-56)||(11238655-11238699)
chr7 (122-217)||(15008279-15008375)
[»] scaffold0217 (1 HSPs)
scaffold0217 (1-246)||(16260-16506)
[»] scaffold0056 (3 HSPs)
scaffold0056 (1-246)||(16876-17121)
scaffold0056 (1-72)||(79023-79094)
scaffold0056 (122-224)||(79111-79213)
[»] scaffold0228 (3 HSPs)
scaffold0228 (1-246)||(4722-4968)
scaffold0228 (1-246)||(12304-12550)
scaffold0228 (1-246)||(22256-22502)
[»] scaffold0145 (1 HSPs)
scaffold0145 (1-246)||(38975-39219)
[»] chr2 (31 HSPs)
chr2 (1-246)||(23660237-23660482)
chr2 (1-246)||(23076657-23076900)
chr2 (1-246)||(27753790-27754035)
chr2 (1-246)||(22337330-22337575)
chr2 (1-240)||(298476-298714)
chr2 (1-246)||(22737841-22738086)
chr2 (1-226)||(32451590-32451815)
chr2 (1-221)||(22730894-22731114)
chr2 (1-146)||(23071624-23071768)
chr2 (1-246)||(23286076-23286310)
chr2 (1-224)||(37788-38000)
chr2 (1-183)||(20309383-20309554)
chr2 (1-145)||(22133878-22134020)
chr2 (1-240)||(23654071-23654286)
chr2 (4-143)||(28406297-28406436)
chr2 (1-65)||(28291963-28292027)
chr2 (3-222)||(23708282-23708500)
chr2 (1-72)||(25176231-25176302)
chr2 (3-71)||(23207744-23207812)
chr2 (170-220)||(19672068-19672118)
chr2 (3-49)||(39827602-39827648)
chr2 (3-72)||(22412722-22412791)
chr2 (94-146)||(22740716-22740768)
chr2 (14-69)||(20519790-20519845)
chr2 (12-71)||(24503473-24503532)
chr2 (12-70)||(12829434-12829492)
chr2 (3-73)||(18786471-18786541)
chr2 (3-69)||(23005197-23005263)
chr2 (3-45)||(34137412-34137454)
chr2 (12-56)||(23171416-23171460)
chr2 (12-56)||(23582673-23582717)
[»] scaffold0011 (2 HSPs)
scaffold0011 (1-246)||(52128-52372)
scaffold0011 (1-240)||(167651-167879)
[»] scaffold0627 (1 HSPs)
scaffold0627 (1-201)||(164-364)
[»] scaffold0305 (1 HSPs)
scaffold0305 (1-246)||(20618-20863)
[»] scaffold0292 (2 HSPs)
scaffold0292 (1-246)||(557-802)
scaffold0292 (3-246)||(3685-3928)
[»] scaffold0175 (2 HSPs)
scaffold0175 (1-246)||(13307-13552)
scaffold0175 (1-145)||(34437-34580)
[»] scaffold0080 (1 HSPs)
scaffold0080 (1-246)||(40127-40371)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-243)||(339612-339853)
[»] scaffold0021 (4 HSPs)
scaffold0021 (1-246)||(124800-125042)
scaffold0021 (1-89)||(62932-63021)
scaffold0021 (14-72)||(135965-136023)
scaffold0021 (14-72)||(144673-144731)
[»] scaffold0026 (5 HSPs)
scaffold0026 (4-246)||(40072-40313)
scaffold0026 (16-146)||(59179-59308)
scaffold0026 (24-131)||(26555-26662)
scaffold0026 (1-78)||(39592-39669)
scaffold0026 (143-246)||(26110-26213)
[»] scaffold0121 (1 HSPs)
scaffold0121 (6-221)||(8198-8413)
[»] scaffold0231 (1 HSPs)
scaffold0231 (1-246)||(23097-23342)
[»] scaffold0130 (3 HSPs)
scaffold0130 (68-246)||(28045-28223)
scaffold0130 (1-72)||(28925-28996)
scaffold0130 (5-73)||(1368-1436)
[»] scaffold0034 (2 HSPs)
scaffold0034 (1-226)||(51545-51770)
scaffold0034 (3-171)||(32826-32994)
[»] scaffold0540 (2 HSPs)
scaffold0540 (1-164)||(674-837)
scaffold0540 (176-246)||(2987-3057)
[»] scaffold0839 (1 HSPs)
scaffold0839 (1-195)||(1739-1932)
[»] scaffold0639 (1 HSPs)
scaffold0639 (1-246)||(8690-8935)
[»] scaffold0100 (1 HSPs)
scaffold0100 (1-147)||(20426-20572)
[»] scaffold0016 (3 HSPs)
scaffold0016 (1-246)||(2066-2311)
scaffold0016 (1-146)||(207180-207324)
scaffold0016 (3-69)||(119214-119280)
[»] scaffold0042 (1 HSPs)
scaffold0042 (1-220)||(23963-24181)
[»] scaffold0647 (1 HSPs)
scaffold0647 (1-246)||(5782-6027)
[»] scaffold0141 (1 HSPs)
scaffold0141 (89-246)||(39691-39848)
[»] scaffold0084 (1 HSPs)
scaffold0084 (1-246)||(10378-10618)
[»] scaffold0049 (1 HSPs)
scaffold0049 (89-246)||(74964-75121)
[»] scaffold1842 (1 HSPs)
scaffold1842 (1-240)||(721-949)
[»] scaffold0193 (1 HSPs)
scaffold0193 (1-246)||(13426-13660)
[»] scaffold0395 (2 HSPs)
scaffold0395 (1-245)||(623-868)
scaffold0395 (1-69)||(8153-8221)
[»] scaffold0070 (1 HSPs)
scaffold0070 (1-246)||(4738-4983)
[»] scaffold0161 (1 HSPs)
scaffold0161 (1-146)||(2106-2250)
[»] scaffold0456 (1 HSPs)
scaffold0456 (1-224)||(10098-10310)
[»] scaffold0120 (3 HSPs)
scaffold0120 (9-224)||(16324-16539)
scaffold0120 (1-224)||(32620-32843)
scaffold0120 (1-224)||(46162-46385)
[»] scaffold0598 (1 HSPs)
scaffold0598 (1-173)||(724-886)
[»] scaffold0413 (2 HSPs)
scaffold0413 (1-224)||(15276-15499)
scaffold0413 (3-73)||(13032-13102)
[»] scaffold0142 (2 HSPs)
scaffold0142 (1-217)||(17024-17240)
scaffold0142 (40-146)||(7471-7576)
[»] scaffold0235 (2 HSPs)
scaffold0235 (1-243)||(11185-11416)
scaffold0235 (1-72)||(14028-14099)
[»] scaffold0427 (1 HSPs)
scaffold0427 (1-217)||(13739-13944)
[»] scaffold0261 (1 HSPs)
scaffold0261 (1-146)||(15974-16118)
[»] scaffold0503 (1 HSPs)
scaffold0503 (1-224)||(12166-12388)
[»] scaffold0114 (1 HSPs)
scaffold0114 (4-201)||(15140-15326)
[»] scaffold0218 (1 HSPs)
scaffold0218 (1-142)||(28941-29081)
[»] scaffold0165 (3 HSPs)
scaffold0165 (1-224)||(3718-3930)
scaffold0165 (1-224)||(7782-7994)
scaffold0165 (3-72)||(27305-27374)
[»] scaffold0221 (1 HSPs)
scaffold0221 (1-143)||(12470-12611)
[»] scaffold0490 (1 HSPs)
scaffold0490 (1-241)||(2172-2401)
[»] scaffold0352 (1 HSPs)
scaffold0352 (1-125)||(17669-17794)
[»] scaffold0309 (1 HSPs)
scaffold0309 (1-241)||(6830-7059)
[»] scaffold0075 (2 HSPs)
scaffold0075 (1-146)||(7955-8099)
scaffold0075 (3-72)||(53134-53203)
[»] scaffold0484 (1 HSPs)
scaffold0484 (1-224)||(1151-1363)
[»] scaffold0358 (2 HSPs)
scaffold0358 (1-224)||(172-385)
scaffold0358 (1-224)||(4948-5161)
[»] scaffold0351 (1 HSPs)
scaffold0351 (1-180)||(16560-16728)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-163)||(32361-32513)
[»] scaffold0032 (1 HSPs)
scaffold0032 (1-183)||(51857-52028)
[»] scaffold0403 (1 HSPs)
scaffold0403 (1-173)||(5135-5297)
[»] scaffold0192 (1 HSPs)
scaffold0192 (1-146)||(10226-10370)
[»] scaffold0166 (1 HSPs)
scaffold0166 (1-146)||(9495-9639)
[»] scaffold0124 (1 HSPs)
scaffold0124 (1-146)||(24312-24456)
[»] scaffold0037 (1 HSPs)
scaffold0037 (13-146)||(80005-80137)
[»] scaffold0028 (2 HSPs)
scaffold0028 (1-147)||(132967-133113)
scaffold0028 (12-70)||(57408-57466)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-220)||(20087-20305)
[»] scaffold0347 (1 HSPs)
scaffold0347 (13-146)||(344-476)
[»] scaffold0211 (1 HSPs)
scaffold0211 (1-147)||(28470-28616)
[»] scaffold0150 (1 HSPs)
scaffold0150 (1-147)||(32397-32543)
[»] scaffold0718 (1 HSPs)
scaffold0718 (1-224)||(4803-5015)
[»] scaffold0266 (1 HSPs)
scaffold0266 (1-93)||(18619-18712)
[»] scaffold0064 (1 HSPs)
scaffold0064 (1-173)||(47273-47435)
[»] scaffold0628 (1 HSPs)
scaffold0628 (1-147)||(2464-2609)
[»] scaffold1984 (1 HSPs)
scaffold1984 (11-154)||(437-580)
[»] scaffold0556 (2 HSPs)
scaffold0556 (1-146)||(7126-7271)
scaffold0556 (1-72)||(8405-8476)
[»] scaffold0475 (1 HSPs)
scaffold0475 (1-146)||(9391-9536)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-147)||(101709-101854)
[»] scaffold0876 (1 HSPs)
scaffold0876 (1-80)||(2746-2825)
[»] scaffold0088 (1 HSPs)
scaffold0088 (1-246)||(21126-21350)
[»] scaffold0125 (1 HSPs)
scaffold0125 (1-146)||(45450-45596)
[»] scaffold0102 (1 HSPs)
scaffold0102 (1-154)||(19573-19726)
[»] scaffold1137 (1 HSPs)
scaffold1137 (1-147)||(1962-2108)
[»] scaffold0389 (1 HSPs)
scaffold0389 (1-75)||(13269-13343)
[»] scaffold0001 (3 HSPs)
scaffold0001 (1-89)||(161056-161145)
scaffold0001 (3-45)||(446965-447007)
scaffold0001 (3-45)||(497896-497938)
[»] scaffold0247 (2 HSPs)
scaffold0247 (1-69)||(6489-6557)
scaffold0247 (106-170)||(6561-6625)
[»] scaffold0106 (2 HSPs)
scaffold0106 (3-201)||(1546-1733)
scaffold0106 (3-201)||(7523-7710)
[»] scaffold0151 (1 HSPs)
scaffold0151 (1-65)||(10540-10604)
[»] scaffold0810 (1 HSPs)
scaffold0810 (1-72)||(3321-3392)
[»] scaffold0138 (3 HSPs)
scaffold0138 (1-174)||(13227-13400)
scaffold0138 (13-71)||(29892-29950)
scaffold0138 (13-71)||(41888-41946)
[»] scaffold0116 (2 HSPs)
scaffold0116 (1-146)||(43445-43590)
scaffold0116 (1-146)||(47365-47510)
[»] scaffold0207 (1 HSPs)
scaffold0207 (1-72)||(2305-2376)
[»] scaffold0078 (1 HSPs)
scaffold0078 (2-147)||(10842-10987)
[»] scaffold0010 (4 HSPs)
scaffold0010 (1-146)||(130222-130367)
scaffold0010 (106-224)||(60479-60598)
scaffold0010 (3-69)||(60301-60367)
scaffold0010 (12-56)||(242435-242479)
[»] scaffold0530 (1 HSPs)
scaffold0530 (2-67)||(690-755)
[»] scaffold0357 (4 HSPs)
scaffold0357 (108-224)||(15866-15983)
scaffold0357 (157-224)||(13367-13435)
scaffold0357 (3-72)||(13596-13665)
scaffold0357 (1-69)||(3162-3230)
[»] scaffold0278 (1 HSPs)
scaffold0278 (1-69)||(5985-6053)
[»] scaffold0507 (1 HSPs)
scaffold0507 (1-147)||(7718-7864)
[»] scaffold0555 (2 HSPs)
scaffold0555 (1-142)||(897-1039)
scaffold0555 (1-61)||(10229-10289)
[»] scaffold0320 (1 HSPs)
scaffold0320 (3-72)||(12384-12453)
[»] scaffold0243 (1 HSPs)
scaffold0243 (2-70)||(5784-5852)
[»] scaffold0621 (1 HSPs)
scaffold0621 (11-145)||(6852-6987)
[»] scaffold0333 (2 HSPs)
scaffold0333 (1-143)||(6931-7073)
scaffold0333 (1-143)||(14311-14453)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-72)||(15491-15562)
[»] scaffold0022 (1 HSPs)
scaffold0022 (3-72)||(80727-80796)
[»] scaffold0012 (2 HSPs)
scaffold0012 (11-72)||(227881-227942)
scaffold0012 (105-224)||(225644-225763)
[»] scaffold0586 (1 HSPs)
scaffold0586 (1-69)||(2245-2313)
[»] scaffold0423 (1 HSPs)
scaffold0423 (1-38)||(10933-10970)
[»] scaffold0040 (1 HSPs)
scaffold0040 (1-72)||(103244-103315)
[»] scaffold0123 (1 HSPs)
scaffold0123 (3-69)||(25574-25640)
[»] scaffold0076 (1 HSPs)
scaffold0076 (2-72)||(24182-24252)
[»] scaffold0004 (2 HSPs)
scaffold0004 (3-69)||(332784-332850)
scaffold0004 (12-71)||(58102-58161)
[»] scaffold0601 (1 HSPs)
scaffold0601 (3-72)||(7119-7188)
[»] scaffold0005 (2 HSPs)
scaffold0005 (3-72)||(268117-268186)
scaffold0005 (1-70)||(307460-307529)
[»] scaffold0367 (1 HSPs)
scaffold0367 (1-73)||(1278-1350)
[»] scaffold0139 (1 HSPs)
scaffold0139 (1-72)||(38762-38833)
[»] scaffold0098 (1 HSPs)
scaffold0098 (1-72)||(29150-29221)
[»] scaffold0525 (1 HSPs)
scaffold0525 (12-70)||(3560-3618)
[»] scaffold0259 (1 HSPs)
scaffold0259 (12-70)||(10541-10599)
[»] scaffold0233 (1 HSPs)
scaffold0233 (12-70)||(14224-14282)
[»] scaffold0109 (2 HSPs)
scaffold0109 (12-70)||(27006-27064)
scaffold0109 (1-45)||(35531-35575)
[»] scaffold0077 (1 HSPs)
scaffold0077 (3-45)||(55271-55313)
[»] scaffold0029 (1 HSPs)
scaffold0029 (12-70)||(125797-125855)
[»] scaffold0013 (1 HSPs)
scaffold0013 (12-70)||(9704-9762)
[»] scaffold0476 (2 HSPs)
scaffold0476 (16-73)||(8190-8247)
scaffold0476 (14-71)||(13233-13290)
[»] scaffold0737 (1 HSPs)
scaffold0737 (3-71)||(1384-1452)
[»] scaffold0184 (1 HSPs)
scaffold0184 (94-146)||(3981-4033)
[»] scaffold0168 (1 HSPs)
scaffold0168 (94-146)||(3287-3339)
[»] scaffold0104 (2 HSPs)
scaffold0104 (94-146)||(2137-2189)
scaffold0104 (94-146)||(9819-9871)


Alignment Details
Target: chr6 (Bit Score: 238; Significance: 1e-132; HSPs: 57)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 19303202 - 19303447
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19303202 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 19303301  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19303302 tctgacctgaactcgccacggcgagcagaggctctcgcctcgagagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 19303401  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  19303402 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 19303447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 29061000 - 29060757
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||| ||||||| ||||||||| |||||||||    
T  29061000 ccttagatgcttttgagtgcctgaacatgtccaataatgattaggaaggaatgtaggatgagattgaacctggaaagattgtagaatgaa-cttttggaa 29060902  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||| |||    
T  29060901 atctgacctgaactcgccacgacgagtagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagt 29060802  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgat 244  Q
    ||||||||| ||||||||||||||| | ||||| |||||||||||    
T  29060801 tgctaagagctgaaccttggggtagtattgagacttaatgatgat 29060757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 18409488 - 18409733
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||     
T  18409488 ccttagatgcttttgagtgccttaacatgtctattaatgattaggaaagaatgtagaatgagattgaacctggaaagatttagaatgaaactttttgaat 18409587  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||| || ||| |||| ||||    
T  18409588 tctgacctgaactcgccacggcgagcagaggctctcgcctctctagtgacccagaaacagagtgccttgttaggattttacgacctttgttgcacgagtt 18409687  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
      | ||||||||||||| |||||| | ||||| |||||||||||||    
T  18409688 attgagagttgaaccttagggtagtattgagacttaatgatgatgt 18409733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 20594233 - 20593993
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    ||||||||| |||||||||||| |||||||||||  ||||||||| |||||||||| ||||||||||||||| ||||||| |||||| ||||||||||||    
T  20594233 ccttagatgtttttgagtgcctaaacatgtctaaatatgattagggaagaatgtaggatgagattgaacctggaaagattgtagaat-aaacttttggaa 20594135  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  20594134 atctgacctgaactcgctacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgccttgttaggattttgcgatctgtgtcgcacaagt 20594035  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgat 241  Q
    || |||| ||||||||||||||||| | ||||| ||||||||    
T  20594034 tgttaagggttgaaccttggggtagtattgagacttaatgat 20593993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 22779888 - 22780133
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| ||| |    
T  22779888 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtggga 22779987  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     |||||||| ||||||||||| | |||| ||||||||||||||||||| ||| |||||||||||| | ||||||| ||||| || || ||| ||||||||    
T  22779988 ttctgacctaaactcgccacggcaagcaaaggctctcgcctcgcgagtaacctagaaacagagtgtcctgttagg-ttttgtgacctttgttgcacaagt 22780086  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    |||  |||||||||||||||||||| |   ||| |||||||||||||    
T  22780087 tgccgagagttgaaccttggggtagtataaagacttaatgatgatgt 22780133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 17287457 - 17287702
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||| ||||||| ||||||||||||| ||| |    
T  17287457 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgtgattgtacctggaaagattgtagaatgaaacttgtggga 17287556  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     |||||||| ||||||||||| |||  ||||||||| | |||| ||||||||||||||||||||| |||||||||  ||||| |||| ||| |||| |||    
T  17287557 ttctgacctaaactcgccacggcgattagaggctcttgtctcgtgagtgacccagaaacagagtgtcttgttagg-gtttgctatctttgttgcacgagt 17287655  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    || | |||||||||||||||||||||| ||||| ||||||| |||||    
T  17287656 tgttgagagttgaaccttggggtagcattgagacttaatgaggatgt 17287702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 20637955 - 20638189
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||          ||||||||||| ||| |     
T  20637955 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaatgaaacttgtgggat 20638044  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||||| || ||| |||| ||||    
T  20638045 tctgacctgaactcgccacggcgagcaaaggctctcacctcgcgagtgacccagaaacagagtgccttgtta-gattttgcgacctttgttgcacgagtt 20638143  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    |   |||||||||||||||| || || | ||| |||||||||||||    
T  20638144 gtcgagagttgaaccttgggataacattaagacttaatgatgatgt 20638189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 28496134 - 28496280
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||  ||    
T  28496134 ccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagacttagaatgaaacttttgagaa 28496233  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||    
T  28496234 tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 28496280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 18821491 - 18821705
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||          ||||||||||| ||| |     
T  18821491 ccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctg----------gaatgaaacttgtgggat 18821580  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||| || ||| |||| ||||    
T  18821581 tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagcgacccagaaacagagtgacttgtta-gattttgcgacctttgttgcacgagtt 18821679  T
Q  201 gctaagagttgaaccttggggtagca 226  Q
    |   ||||||||||||||||||||||    
T  18821680 gtcgagagttgaaccttggggtagca 18821705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 25629016 - 25629257
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattt-agaatgaaacttttggaa 99  Q
    ||||||||| | || || |||| ||||| |||| |||||||||||||| | ||||||||||||||||||||| ||| |||| ||||| |||||||||  |    
T  25629016 ccttagatgttgttaagcgcctaaacatctctattaatgattaggaaatattgtagaatgagattgaacctggaaatattttagaat-aaacttttgtga 25629114  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     | ||||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||| |||| |||    
T  25629115 ttatgacctgtactcgccgtggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacttttgttgcacgagt 25629214  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatg 242  Q
    || |||||||||||||||||||||| | ||||| |||||||||    
T  25629215 tgttaagagttgaaccttggggtagtattgagacttaatgatg 25629257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 20360632 - 20360863
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||          ||||||||||| ||| |     
T  20360632 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaatgaaacttgtgggat 20360721  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| || ||| |||| ||||    
T  20360722 tctgacctgaactcgccatggcgagctgaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagg-ttttgcgacctttgttgcacgagtt 20360820  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatga 243  Q
    | | ||  ||||||||| |||||| | | ||| ||||||||||    
T  20360821 gttgaggattgaacctttgggtagtattaagacttaatgatga 20360863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 29808544 - 29808691
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga--tttagaatgaaacttttgga 98  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||  ||||||||||||| |||||     
T  29808544 ccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagatttttagaatgaaac-tttggg 29808642  T
Q  99 aatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||    
T  29808643 aatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 29808691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 18457174 - 18456955
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |   ||| |||||| ||||||| | ||    
T  18457174 ccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggattaattaagaatg-aactttttggaa 18457076  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtt-aggattttgcgatctatgtcgcacaagt 199  Q
     |||||||||||| |||| | |||| |||||||||||||||||||||  ||||   |||||  |||||||| ||||||||||||||| |||||||| |||    
T  18457075 gctgacctgaactagccatggcgagtagaggctctcgcctcgcgagttgcccaattacaga-agccttgttcaggattttgcgatctttgtcgcacgagt 18456977  T
Q  200 tgctaagagttgaaccttgggg 221  Q
     | | |||||||||||||||||    
T  18456976 cgttgagagttgaaccttgggg 18456955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 1561763 - 1561622
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatg-aaacttttggaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| | |||||||| |||||||||  |    
T  1561763 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaagtagaatgagattgaacctggaaaaacttagaatgaaaacttttgaga 1561664  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcg 142  Q
    |||||||| ||||| |||||| |||||| ||||||||||||||    
T  1561663 atctgacc-gaacttgccacggcgagcataggctctcgcctcg 1561622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 16920305 - 16920476
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| || |||||| |||||          |||| |||||| |||||     
T  16920305 ccttagatgcttttgagtgcctgaatatgtctaataatgattagaaaagaatgtaggataagattgtacctg----------gaattaaacttatggaat 16920394  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcga 183  Q
    |||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||| |||| |||||| |||||||||||    
T  16920395 tctgacctgaactcgccatggcgagcagaggctctcgccttgcgagtgacccagaaacaaagtgacttgtt-ggattttgcga 16920476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 21939843 - 21939699
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||  |||||||||||||||||| ||||| ||||||||||||||||||| |||||||||| |||| ||||| ||||||| ||||||| |  ||    
T  21939843 ccttagatgcccttgagtgcctgaacatgtgtaatattgattaggaaagaatgtaggatgagattgagcctggaaagacttagaataaaactttggagaa 21939744  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||| |||||||||||| | |||||||||||||||||||||||||    
T  21939743 tctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 21939699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 25611384 - 25611608
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaac-ttttggaa 99  Q
    |||||||||| |||||||||||||||||||||||||||||||||||  ||||| || ||||||||| ||||| ||||| ||||||||||||   || | |    
T  25611384 ccttagatgcctttgagtgcctgaacatgtctaataatgattaggagtgaatgcagcatgagattggacctggaaagacttagaatgaaacaacttagga 25611483  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     |||||||||||||||||| |  ||||||||||||||||||||||||  |  |   |||||||||| |||| ||||  ||||||||| |||||||  |||    
T  25611484 ttctgacctgaactcgccatggagagcagaggctctcgcctcgcgagctagtctagaacagagtgcattgtgagga-cttgcgatctgtgtcgcatgagt 25611582  T
Q  200 tgctaagagttgaaccttggggtagc 225  Q
    | || ||||||||||||| |||||||    
T  25611583 tacttagagttgaacctttgggtagc 25611608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 22831951 - 22831768
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||  ||||||||||||||| |||||||  |||||| ||| | |||||||||||||          |||| |||||  ||| |     
T  22831951 ccttagatgcttttgagtgtttgaacatgtctaatattgattagtgaagaatataggacgagattgaacctg----------gaattaaactgatgggat 22831862  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcac 195  Q
    ||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||| || ||||||||    
T  22831861 tctaacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgaccgagaaacagagtgacttgtt-ggattttgcgacctttgtcgcac 22831768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 4667874 - 4668019
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||| ||||| ||||| |||||||||||  |||| |      
T  4667874 ccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagtttagaatgaa--tttttgtg 4667971  T
Q  100 atctg-acctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    | ||| |||||||||||||| | |||| ||||||||||||||||||||    
T  4667972 aactgaacctgaactcgccatggcgagtagaggctctcgcctcgcgag 4668019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 19652655 - 19652512
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||| |||||||||||  |||  |||    
T  19652655 ccttaaatgtttttgagtgcctgaacatgtctaataatgattaggaaagattgaagaatgagattgaacctggaaagactttagaatgaatttttgtgaa 19652556  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcg 144  Q
     | | |||||||||||||| | |||| ||||||||||||||||||    
T  19652555 ttgt-acctgaactcgccatggcgagtagaggctctcgcctcgcg 19652512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 4185484 - 4185629
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    |||||||||||||||||||| |||||| ||||||||| ||||| ||||||||||||| |||||||||||||| ||||| |||||||||||  |||| |      
T  4185484 ccttagatgcttttgagtgcatgaacaagtctaataacgattatgaaagaatgtagagtgagattgaacctggaaagagtttagaatgaa--tttttgtg 4185581  T
Q  100 atctg-acctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    | ||| |||||||||||||| | |||| ||||||||||||||||||||    
T  4185582 aactgaacctgaactcgccatggcgagtagaggctctcgcctcgcgag 4185629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 11185951 - 11185780
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| |||||||||||||||||||| |||| |||||||  |||| ||||| | |||||||||||||          |||| |||||| ||| |     
T  11185951 ccttagatgcctttgagtgcctgaacatgtcgaatattgattagtgaagagtgtaggacgagattgaacctg----------gaattaaacttatgggat 11185862  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcga 183  Q
    ||| |||||||||||||||| ||||||||||| ||||||||| |||||||||||||||| |||| ||||||| ||||||||||    
T  11185861 tctaacctgaactcgccacggcgagcagaggccctcgcctcgtgagtgacccagaaacatagtgacttgtta-gattttgcga 11185780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 246
Target Start/End: Original strand, 25603057 - 25603291
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaac-ttttggaaatctgacctga 110  Q
    |||||||||||||||||||||||||||||||||||  ||||| |  ||||||||| ||||| ||||| ||||||||||||   || | | |||||| |||    
T  25603057 tttgagtgcctgaacatgtctaataatgattaggagtgaatgcatgatgagattggacctggaaagacttagaatgaaacaacttaggattctgacttga 25603156  T
Q  111 actcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttgctaagagtt 210  Q
    |||| ||| | ||||||||||||||||||||| |||  |  |   |||||||||| |||| ||||  ||||||||| |||||||  ||||||| ||||||    
T  25603157 actcaccatggcgagcagaggctctcgcctcgtgagctagtctagaacagagtgcattgtgagga-cttgcgatctgtgtcgcatgagttgcttagagtt 25603255  T
Q  211 gaaccttggggtagcactgagaattaatgatgatgt 246  Q
    ||||||| |||||||  | ||| ||||||| |||||    
T  25603256 gaacctttgggtagctttaagacttaatgacgatgt 25603291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 15894091 - 15894237
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaa-cttttggaa 99  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||  |||||||  ||||||||| ||||| ||||| |||||||||||    |||| |    
T  15894091 ccttagatgcctttgagtgcctgaacatgtctaatattgattaggagtgaatgtaagatgagattggacctggaaagacttagaatgaaagaacttggga 15894190  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
     |||||||||||||||||| | ||||||||| ||||| |||||||||    
T  15894191 ttctgacctgaactcgccatggcgagcagagtctctcacctcgcgag 15894237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 4189416 - 4189271
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||| ||||| ||||| |||||||||||  |||| |      
T  4189416 ccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagtttagaatgaa--tttttgtg 4189319  T
Q  100 atctg-acctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    | ||| |||| |||||| || | |||| ||||||||||||||||||||    
T  4189318 aactgaacctaaactcgtcatggcgagtagaggctctcgcctcgcgag 4189271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 4674721 - 4674866
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||| ||||| ||||| |||||||||||  |||| |      
T  4674721 ccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagtttagaatgaa--tttttgtg 4674818  T
Q  100 atctg-acctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    | ||| |||| |||||| || | |||| ||||||||||||||||||||    
T  4674819 aactgaaccttaactcgtcatggcgagtagaggctctcgcctcgcgag 4674866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 27332945 - 27333089
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||||||||||||| |||||||||| |||| |||||||||||||| | ||||||||| ||||||||| ||||| ||||||||| || |||||  |    
T  27332945 ccttagatgcttttgagtggctgaacatgtataatgatgattaggaaagattttagaatgaggttgaacctggaaagattttagaatg-aagttttgtga 27333043  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcga 145  Q
     |   |||||||||||||| | |||| |||||||||||||||||||    
T  27333044 gttgcacctgaactcgccatggcgagtagaggctctcgcctcgcga 27333089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 27393685 - 27393829
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||||||||||||| |||||||||| |||| |||||||||||||| | ||||||||| ||||||||| ||||| ||||||||| || |||||  |    
T  27393685 ccttagatgcttttgagtggctgaacatgtataatgatgattaggaaagattttagaatgaggttgaacctggaaagattttagaatg-aagttttgtga 27393783  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcga 145  Q
     |   |||||||||||||| | |||| |||||||||||||||||||    
T  27393784 gttgcacctgaactcgccatggcgagtagaggctctcgcctcgcga 27393829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 31155059 - 31155137
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagat 79  Q
    ||||||||||||||||||||||||| | ||||||||| |||| ||||||||||||||||||||||||||||| ||||||    
T  31155059 ccttagatgcttttgagtgcctgaataagtctaataacgattgggaaagaatgtagaatgagattgaacctggaaagat 31155137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 25644782 - 25644559
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaa-agatttagaatgaaacttttggaa 99  Q
    ||||||||| |||||||||||||  ||||| |||   ||||||||||||| | |||| ||||||||||||||||| || || |||||| |  |||||| |    
T  25644782 ccttagatgtttttgagtgcctgttcatgtataacgttgattaggaaagattttagattgagattgaacctgaaatagtttaagaatggat-ttttggga 25644684  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     |   ||| ||||||||||   |||| |||||| ||||||||||||||  ||| |   |||| ||| |  ||||| ||||||||||| |||||||| |||    
T  25644683 gttacacccgaactcgccatagcgagtagaggccctcgcctcgcgagttgcccggtttcagaatgcttgtttaggtttttgcgatctttgtcgcacgagt 25644584  T
Q  200 tgctaagagttgaaccttggggtag 224  Q
    |||| ||||||||||||||||||||    
T  25644583 tgctgagagttgaaccttggggtag 25644559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 23019867 - 23019796
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||| | |||| ||||||||||||||    
T  23019867 ccttagatgcttttgagtgcctgaacatgtgtgataatgattaggaaagattttagattgagattgaacctg 23019796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 22334543 - 22334632
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaa 90  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||  |||||||  ||||||||| ||||| ||| | |||||||||||    
T  22334543 ccttagatgcctttgagtgcctgaacatgtctaatattgattaggagtgaatgtaagatgagattggacctggaaatacttagaatgaaa 22334632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 22080398 - 22080543
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct-gaaaagatttagaatgaaacttttggaa 99  Q
    ||||||||| ||||||||| |||||||||||||||||||||||| ||||| |  ||| | ||||||||||| ||| || || |||| | ||||| ||| |    
T  22080398 ccttagatgtttttgagtgactgaacatgtctaataatgattagaaaagattagagattaagattgaacctggaatagtttaagaacg-aacttatggga 22080496  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
     |   |||||||||||||| | |||| ||||||||||||||||||||    
T  22080497 gttatacctgaactcgccatggcgagtagaggctctcgcctcgcgag 22080543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 20109673 - 20109605
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    ||||||| || ||||||||||||||||| |||||||||||||| |||  | |||| |||||||||||||    
T  20109673 ttagatgattctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacct 20109605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 31164531 - 31164589
Alignment:
Q  13 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    ||||||||||||||||  ||| ||||||||||||| |||||||| ||||||||| ||||    
T  31164531 ttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggatgagattggacct 31164589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 25641939 - 25641991
Alignment:
Q  94 ttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    |||| |||||| | ||||||||||||| |||||||| ||||||||||||||||    
T  25641939 ttgggaatctggcttgaactcgccacggcgagcagatgctctcgcctcgcgag 25641991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 22331862 - 22331803
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  22331862 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 22331803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 146
Target Start/End: Complemental strand, 23990253 - 23990218
Alignment:
Q  111 actcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||||||||||||||||| ||||||||||||||||    
T  23990253 actcgccacgacgagcagatgctctcgcctcgcgag 23990218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 1538628 - 1538686
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  1538628 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 1538686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 1544727 - 1544785
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  1544727 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 1544785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 17106246 - 17106180
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||| ||||||||||||||| |||| ||| |||||||||| |||  | |||| |||||||||||    
T  17106246 ttagatgattttgagtgcctgaatatgtataagaatgattaggcaagtttttagactgagattgaac 17106180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 19023907 - 19023837
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctga 73  Q
    ||||||| ||| | ||||||||| |||| |||||||||||||| |||  | |||| |||||||||||||||    
T  19023907 ttagatgatttcgggtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctga 19023837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 20224478 - 20224412
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||| |||||||||||||||||||  ||| |||||||||| |||  | |||| |||||||||||    
T  20224478 ttagatgattttgagtgcctgaacatgcataagaatgattaggcaagtttttagattgagattgaac 20224412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 22118462 - 22118396
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||| |||||||||||||||||||  ||| |||||||||| |||  | |||| |||||||||||    
T  22118462 ttagatgattttgagtgcctgaacatgcataagaatgattaggcaagtttttagattgagattgaac 22118396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 25956283 - 25956353
Alignment:
Q  2 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    |||||||  ||||||||||||||||||||||||| | |||| | ||||| | |||| ||||||| ||||||    
T  25956283 cttagatatttttgagtgcctgaacatgtctaattacgattggaaaagattctagattgagatttaacctg 25956353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 33443579 - 33443517
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagatt 65  Q
    ||||||| ||||||||||||||| ||||  ||||||||||||| |||| | |||| |||||||    
T  33443579 ttagatgattttgagtgcctgaatatgtacaataatgattaggcaagattttagattgagatt 33443517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 35008684 - 35008618
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||| |||| ||||||||||||||| ||| |||||||||| |||  | |||| |||||||||||    
T  35008684 ttagatgtttttaagtgcctgaacatgtataagaatgattaggcaagtttttagactgagattgaac 35008618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 15041306 - 15041355
Alignment:
Q  94 ttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgc 143  Q
    |||| |||||||| || |||||||| |||||||||| |||||||||||||    
T  15041306 ttgggaatctgacttgtactcgccatgacgagcagatgctctcgcctcgc 15041355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 16372280 - 16372223
Alignment:
Q  13 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||||||||||||||| |||| ||||||||||| | |||||||| |  ||||||||||    
T  16372280 ttgagtgcctgaacatatctagtaatgattagggatgaatgtaggacaagattgaacc 16372223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 14099049 - 14099005
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtag 56  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||    
T  14099049 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 14099005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 14472692 - 14472648
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtag 56  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||    
T  14472692 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 14472648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 16741555 - 16741503
Alignment:
Q  94 ttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||||||||| | || |||||||| | |||||||| ||||||||||||||||    
T  16741555 ttggaaatctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 16741503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 16924635 - 16924687
Alignment:
Q  94 ttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    |||||| |||| |||| |||||||| | |||||||| ||||||||||||||||    
T  16924635 ttggaagtctggcctgtactcgccatggcgagcagatgctctcgcctcgcgag 16924687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 16929350 - 16929402
Alignment:
Q  94 ttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    |||||| |||| |||| |||||||| | |||||||| ||||||||||||||||    
T  16929350 ttggaagtctggcctgtactcgccatggcgagcagatgctctcgcctcgcgag 16929402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 18453467 - 18453419
Alignment:
Q  176 ttttgcgatctatgtcgcacaagttgctaagagttgaaccttggggtag 224  Q
    ||||||||||| ||||||||||| || || ||||||| |||||||||||    
T  18453467 ttttgcgatctttgtcgcacaagatgttatgagttgatccttggggtag 18453419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 18955520 - 18955572
Alignment:
Q  94 ttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    |||| |||||| | || |||||||| |||||||||| ||||||||||||||||    
T  18955520 ttgggaatctggcttgtactcgccatgacgagcagatgctctcgcctcgcgag 18955572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 23657177 - 23657229
Alignment:
Q  94 ttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||||| ||| |||| |||||||| | |||||||| ||||||||||||||||    
T  23657177 ttggaaacctggcctgtactcgccatggcgagcagatgctctcgcctcgcgag 23657229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 201; Significance: 1e-109; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 14039109 - 14038865
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattt-agaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||    
T  14039109 ccttagatgcttttgagtgcctgaacatgtctaataatgatttggaaagaatgtagaatgagattgaacctagaaagattttagaatgaaacttttggaa 14039010  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  14039009 atctgaccagaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctgtgtcgcacaagt 14038910  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgat 244  Q
    ||||||||||||||||||||||||| | ||||| |||||||||||    
T  14038909 tgctaagagttgaaccttggggtagtattgagacttaatgatgat 14038865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 3 - 246
Target Start/End: Complemental strand, 15091355 - 15091111
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattt-agaatgaaacttttggaaat 101  Q
    ||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||    
T  15091355 ttagatgcttttgagtttctgaacatgtctaatattgattaggaaagaatgtagaatgagattgaacctggaaggattttagaatgaaacttttggaaat 15091256  T
Q  102 ctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttg 201  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||     
T  15091255 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctgtgtcgcacaagttt 15091156  T
Q  202 ctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    ||||||||||||||||||||||| | ||||| ||||||| |||||    
T  15091155 ctaagagttgaaccttggggtagtattgagacttaatgaagatgt 15091111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 44053289 - 44053044
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||| ||| ||||||||| ||| |    
T  44053289 ccttagatgcttttgagtgtctgaacatgtctaataatgattgggaaagaatgtaggatgagattgaacctgtaaagattataggatgaaacttgtggga 44053190  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||| |||| |||    
T  44053189 ttctgacctgaactcgccacggcgagcagagactctcgcctcgcgagtgacccagaaacagagtgccttgtta-gattttgcgacctttgttgcacgagt 44053091  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    ||   |||||||||||||||| ||||| | ||| |||||||||||||    
T  44053090 tgtcgagagttgaaccttgggatagcattaagacttaatgatgatgt 44053044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 16377183 - 16377429
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| ||||||||||||||| || |||  ||||||||| ||||||| |    
T  16377183 ccttagatgcttttgagcgtctgaacatgtctaataatgattaggaaataatgtaggatgagattgaacctggaatgatcgtagaatgaa-cttttggga 16377281  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaag- 198  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| | || ||| |||| ||     
T  16377282 atctgacctgaactcgccacggcgagcagaggctctcgcctcacgagtgacccagaaacatagtgccttgttaggattttgctacctttgttgcacgagt 16377381  T
Q  199 ttgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    ||  | |||||||||||||||||||| | ||||| |||||||||||||    
T  16377382 tttatgagagttgaaccttggggtagtattgagacttaatgatgatgt 16377429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 22636894 - 22636671
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||| ||| ||||||||||||| ||| |    
T  22636894 ccttagatgcttttgagtgtctgaagatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaaaattgtagaatgaaacttgtggga 22636795  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     |||||| ||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||| || ||| |||| |||    
T  22636794 ttctgacttgacctcgccacggcgagcagaggctctcgcctcacgagtgacccagaaacagagtgtcttgttagg-ttttgcgacctttgttgcacgagt 22636696  T
Q  200 tgctaagagttgaaccttggggtag 224  Q
    || | ||| ||||||||||||||||    
T  22636695 tgttgagaattgaaccttggggtag 22636671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 44928584 - 44928807
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattt-agaatgaaacttttggaa 99  Q
    ||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||    
T  44928584 ccttatatgtttttgagtgcctgaacatatctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaactttgggaa 44928683  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     ||||||| |||||||||| | |||||||||||||||||||||||||||||||||  ||||| ||| |  ||||||||||||||||| |||||||| |||    
T  44928684 -tctgaccagaactcgccatggcgagcagaggctctcgcctcgcgagtgacccagttacagaatgcttgtttaggattttgcgatctttgtcgcacgagt 44928782  T
Q  200 tgctaagagttgaaccttggggtag 224  Q
     | | |||||||||||||| |||||    
T  44928783 cgttgagagttgaaccttgtggtag 44928807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 7799157 - 7798975
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| | ||||||| ||||||||||||||| |||| || ||||||||||||| | | |    
T  7799157 ccttagatgcttttgagtgcctgaacatgactaataatgattaggacataatgtaggatgagattgaacctggaaagtttgtagaatgaaacttgtagta 7799058  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcga 183  Q
     |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||    
T  7799057 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacaaagtgtcttgttagg-ttttgcga 7798975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 3097092 - 3096880
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||          ||||||||||| ||| |     
T  3097092 ccttagatgttttcgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaatgaaacttgtgggat 3097003  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| || ||| |||| ||||    
T  3097002 tctgacctgaactcgccaaggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgcacgagtt 3096904  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    |   ||||||||||||| ||||||    
T  3096903 gtcgagagttgaacctttgggtag 3096880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 12903205 - 12902994
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||          ||||||||||| ||| |     
T  12903205 ccttagatgcttt-gagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaatgaaacttgtgggat 12903117  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| || ||| |||| || |    
T  12903116 tctgacctgaactcgccacggcgagtagaggctcccgcctcgcgagtgacccagaaacagagtgccttgtta-gattttgcgacctttgttgcacgagct 12903018  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    | | ||||||||||||| ||||||    
T  12903017 gttgagagttgaacctttgggtag 12902994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 7089326 - 7089098
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||          ||||||||||| ||| |     
T  7089326 ccttagatgcctatgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaatgaaacttatgggat 7089237  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||| || ||| |||  ||||    
T  7089236 tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccggaaacagagtgtcttgtta-gattttgcgacctttgttgcaagagtt 7089138  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatga 240  Q
    |   ||||||||||||| | |||||| | ||| |||||||    
T  7089137 gtcgagagttgaacctttgagtagcattaagacttaatga 7089098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 14052974 - 14053186
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||          |||| |||||| ||| |     
T  14052974 ccttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtaggatgagattgaacttg----------gaattaaacttgtgggat 14053063  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||| ||| | ||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||| || ||| |||| ||||    
T  14053064 tctgacctgaactcaccatggcgagcagaggctctcgccttgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgcacgagtt 14053162  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    |   ||||||||||| | ||||||    
T  14053163 gtcgagagttgaacccttgggtag 14053186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 17047745 - 17047956
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||  |||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||           | ||||||||||| ||| |     
T  17047745 ccttagatgtctttgagtgcctgaacatgactaataatgattaggaaaaaatgtaggatgagattgaac-----------tggaatgaaacttgtgggat 17047833  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||| | || ||||||| || ||| |||| ||||    
T  17047834 tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccggaaacagagtgccttgtga-gactttgcgacctttgttgcacgagtt 17047932  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    | | ||||||||||||| ||||||    
T  17047933 gttgagagttgaacctttgggtag 17047956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 44102669 - 44102451
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattt-agaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||| ||||| |||||||||||| ||| |||||||| ||||||||||||||| | |||||| ||||| |||||||  |||    
T  44102669 ccttagatgcttttgagtgcctgagcatgtttaataatgattatgaa-gaatgtaggatgagattgaacctggatagattttagaataaaactttgagaa 44102571  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     |||||||||||||||||| | |||||||||||||||||||||||||||||| |   ||||| | | |  ||||||||||||||||| ||| |||| |||    
T  44102570 -tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacctatttacagaatacttgtttaggattttgcgatctttgtagcacgagt 44102472  T
Q  200 tgctaagagttgaaccttggg 220  Q
     | | ||||||||||||||||    
T  44102471 cgttgagagttgaaccttggg 44102451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 16239653 - 16239876
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaag-aatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||| |    
T  16239653 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaatgtagaatgagattgaacctggaaagatttagaatgaaacttgtgg-a 16239751  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     ||| ||||||||||||                      |||||||||||||||||||||||||| ||||||||| |||||||| || ||| |||| |||    
T  16239752 ttctaacctgaactcgc----------------------ctcgcgagtgacccagaaacagagtgacttgttaggtttttgcgacctttgttgcacgagt 16239829  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    || | |||||||||| ||||||||| | | ||| |||||||||||||    
T  16239830 tgttgagagttgaactttggggtagtattaagacttaatgatgatgt 16239876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 16597105 - 16596963
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||| |  ||    
T  16597105 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagacttagaatgaaaatttagagaa 16597006  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcg 144  Q
    ||||||| |||||||||| | |||| ||||| ||||||| ||||    
T  16597005 tctgacc-gaactcgccatggcgagtagaggttctcgccccgcg 16596963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 15552273 - 15552129
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||| ||||||| ||| ||| |  ||    
T  15552273 ccttatatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaaagacttagaatcaaaatttggagaa 15552174  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||||| |||||||||||| ||||||||||||| |||||||||||    
T  15552173 tctgacc-gaactcgccacggcgagcagaggctcgcgcctcgcgag 15552129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 24029201 - 24029057
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||  ||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||| ||||| ||||||||||||||| |  ||    
T  24029201 ccttagatgtctttgagtgcctgaacatgtctaatattgattatgaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggagaa 24029102  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||| |||||||||||| | |||||||||||||||||||||||||    
T  24029101 tctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 24029057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 13812470 - 13812614
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| |||||||| |||||||||||||||| ||||||||||| ||||||| ||||||||||||||| ||||| ||||||||||||||| |  ||    
T  13812470 ccttagatgcctttgagtgtctgaacatgtctaatattgattaggaaataatgtaggatgagattgaacctggaaagacttagaatgaaactttggagaa 13812569  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||| || ||||||||| | |||||||||||||||||||||||||    
T  13812570 tctga-ctaaactcgccatggcgagcagaggctctcgcctcgcgag 13812614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 3 - 146
Target Start/End: Original strand, 22633876 - 22634018
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaatc 102  Q
    ||||||||  |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| |  ||||    
T  22633876 ttagatgcccttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggataatc 22633975  T
Q  103 tgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
     ||  ||||||||||| | |||||||||||||||||||||||||    
T  22633976 aga-ttgaactcgccatggcgagcagaggctctcgcctcgcgag 22634018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 20156951 - 20157095
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||  |||||||||||||||    ||    
T  20156951 ccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaaggcttagaatgaaactttgaagaa 20157050  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    | ||| |||||||||||| | || ||||||||||||||||||||||    
T  20157051 tatga-ctgaactcgccatggcgtgcagaggctctcgcctcgcgag 20157095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 84 - 223
Target Start/End: Complemental strand, 7894077 - 7893938
Alignment:
Q  84 aatgaaacttttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcga 183  Q
    |||||||||| ||| | |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| | ||||||||| ||||||||    
T  7894077 aatgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcacgagtgacccagaaacagagagtcttgttaggtttttgcga 7893978  T
Q  184 tctatgtcgcacaagttgctaagagttgaaccttggggta 223  Q
     || ||| |||  ||||||  |||||||||||||||||||    
T  7893977 cctttgttgcatgagttgccgagagttgaaccttggggta 7893938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 21815293 - 21815511
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||| ||| |||||||| | |||||||| |   ||| |||||| ||||||| | ||    
T  21815293 ccttagatgcttttgagtgtctgaacatgtttaataatgattaggaaataatttagaatgataatgaacctggattaattaagaatg-aactttttggaa 21815391  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttg-ttaggattttgcgatctatgtcgcacaagt 199  Q
     ||||||||||||||||| | |||| |||||||||||||||||||||  ||||   |||||  |||||| |||||||||||||||||   |||||| |||    
T  21815392 gctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagttgcccaattacaga-agccttgtttaggattttgcgatcttcatcgcacgagt 21815490  T
Q  200 tgctaagagttgaaccttggg 220  Q
     | | ||||||||||||||||    
T  21815491 cgttgagagttgaaccttggg 21815511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 3 - 235
Target Start/End: Original strand, 15464592 - 15464825
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaa-agatttagaatgaaacttttggaaat 101  Q
    ||||||| ||||||||||||||| |||| ||||||||||||||||||| | |||| ||||||||||||||||| || || |||||| |  ||||||   |    
T  15464592 ttagatgattttgagtgcctgaatatgtataataatgattaggaaagattttagattgagattgaacctgaaatagtttaagaatggat-ttttgggtgt 15464690  T
Q  102 ctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtt-aggattttgcgatctatgtcgcacaagtt 200  Q
       |||||||||| |||   |||| |||||||||||||||||||||  |||||  ||||| || |||||| |||||||||| |||| |||||||||||||    
T  15464691 tacacctgaactcaccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaatgacttgtttaggattttgcaatctttgtcgcacaagtt 15464790  T
Q  201 gctaagagttgaaccttggggtagcactgagaatt 235  Q
    | || |||||||||||||| |||| | ||||||||    
T  15464791 gttatgagttgaaccttggagtagtaatgagaatt 15464825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 6190893 - 6190783
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||| ||||||| ||||||||||||| ||| |    
T  6190893 ccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtggga 6190794  T
Q  100 atctgacctga 110  Q
     | ||||||||    
T  6190793 ttttgacctga 6190783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 21814964 - 21815109
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||| | |||||||| |   ||| |||||| ||||||| | ||    
T  21814964 ccttagatgcttttgagtgtctgaacatgtttaataatgattaggaaagaatttagaatgataatgaacctggattaattaagaatg-aactttttggaa 21815062  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
     ||||| ||||||||||| | |||| |||||||||||||||||||||    
T  21815063 gctgacttgaactcgccatggcgagtagaggctctcgcctcgcgagt 21815109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 21818386 - 21818531
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||| | |||||||| |   ||| |||||| ||||||| | ||    
T  21818386 ccttagatgcttttgagtgtctgaacatgtttaataatgattaggaaagaatttagaatgataatgaacctggattaattaagaatg-aactttttggaa 21818484  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
     ||||| ||||||||||| | |||| |||||||||||||||||||||    
T  21818485 gctgacttgaactcgccatggcgagtagaggctctcgcctcgcgagt 21818531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 146
Target Start/End: Complemental strand, 8846834 - 8846689
Alignment:
Q  2 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaaa 100  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||| |||||||||||  |||||  |     
T  8846834 cttagatgtttttgagtacctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatgaattttttgtgag 8846735  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    |   |||| ||||||||| | |||| ||||||||||||||||||||    
T  8846734 ttgcaccttaactcgccatggcgagtagaggctctcgcctcgcgag 8846689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 12774458 - 12774313
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||| | |||  ||||||||||  |||||  |    
T  12774458 ccttagatgtttttgagtgcctgaacatgtctaataatgattagaaaagattggagaatgagattgaacctggagagacgttagaatgaa--ttttgtga 12774361  T
Q  100 atctg-acctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
    | ||| |||||||||||||| | ||||||||||||||||||||||||||    
T  12774360 a-ctgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 12774313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 3 - 224
Target Start/End: Original strand, 52242856 - 52243077
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaa-agatttagaatgaaacttttggaaat 101  Q
    ||||||| ||| |||||||||||||||| |||||||||| |||||||| | ||||||||||||||||||| || || || |||||| |  | |||| | |    
T  52242856 ttagatgatttcgagtgcctgaacatgtataataatgatcaggaaagattctagaatgagattgaacctggaatagtttaagaatgcat-tgttgggagt 52242954  T
Q  102 ctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttg 201  Q
       ||||||||||||||   |||| |||||||||||||||||||||  |||||  ||||| ||| |  ||||||||||||||||| |||||||| ||| |    
T  52242955 tacacctgaactcgccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaatgcttgtttaggattttgcgatctttgtcgcacgagtcg 52243054  T
Q  202 ctaagagttgaaccttggggtag 224  Q
      ||||||||||| |||||||||    
T  52243055 taaagagttgaactttggggtag 52243077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 105 - 240
Target Start/End: Original strand, 23374125 - 23374259
Alignment:
Q  105 acctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttgcta 204  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||| | || ||| |||| ||||| |     
T  23374125 acctgaactcgccacggcgagcagaggctctcgcctcgcgggtgacccagaaacagagtgacttgtta-gattttgcaacctttgttgcacgagttgttg 23374223  T
Q  205 agagttgaaccttggggtagcactgagaattaatga 240  Q
    ||  || |||||| |||||||| | ||| |||||||    
T  23374224 aggattaaacctttgggtagcattaagacttaatga 23374259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 59 - 146
Target Start/End: Complemental strand, 3332287 - 3332201
Alignment:
Q  59 tgagattgaacctgaaaagatttagaatgaaacttttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    |||||||||||||| ||||| ||||||||||||||| |  |||||||| ||||||||||| | |||||||||||||||||||||||||    
T  3332287 tgagattgaacctggaaagacttagaatgaaactttggagaatctgac-tgaactcgccatggcgagcagaggctctcgcctcgcgag 3332201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 39705949 - 39706020
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| || ||| | ||||||||||||    
T  39705949 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattgaagattaagattgaacctg 39706020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 15099810 - 15099665
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct-gaaaagatttagaatgaaacttttggaa 99  Q
    ||||||||| |||||||||||||||| ||| | || |||||||||||||| |||||| ||||||||||||| ||| || || |||||| || |||||  |    
T  15099810 ccttagatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacctggaatagtttaagaatg-aatttttgtga 15099712  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
     |   |||||||||||||| | |||| ||||||||||||||||||||    
T  15099711 gttgcacctgaactcgccatggcgagtagaggctctcgcctcgcgag 15099665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 43198249 - 43198317
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||    
T  43198249 ccttagatgtttttgagtgcctgaacatgtgtaataatgattaggaaagattttagattgagattgaac 43198317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 17046765 - 17046721
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtag 56  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  17046765 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtag 17046721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 15868296 - 15868367
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| ||||||||||||||| |||| ||||||||||||||||||  | |||| ||||||||||||||    
T  15868296 ccttagatgattttgagtgcctgaatatgtataataatgattaggaaagtttttagattgagattgaacctg 15868367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 15190777 - 15190706
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| ||||||||||||||||||||||||| |||||||| ||||  | |||| ||||||| ||||||    
T  15190777 ccttagatgtttttgagtgcctgaacatgtctaattatgattagaaaaggttctagattgagatttaacctg 15190706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 13436 - 13505
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| ||||||||||||||||| || |||||||||||||| |||  | |||| ||||||||||||||    
T  13436 ttagatgattttgagtgcctgaacaagtataataatgattaggcaagtttttagattgagattgaacctg 13505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 14685593 - 14685534
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| || |||||||||||    
T  14685593 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggataagattgaacct 14685534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 13844999 - 13844950
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaga 50  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||| |||||    
T  13844999 ccttagatgtttttgagtgtctgaacatgtctaattatgattagaaaaga 13844950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 14679389 - 14679325
Alignment:
Q  7 atgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||| |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  14679389 atgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 14679325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 12287794 - 12287865
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| || | |||| |||||||||| |||||||||||||| |||  | |||| ||||||||||||||    
T  12287794 ccttagatgtttctaagtgtctgaacatgtataataatgattaggcaagtttttagattgagattgaacctg 12287865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 23838855 - 23838796
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  23838855 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 23838796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 32851911 - 32851868
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattag 44  Q
    ||||||||| ||||||||||||||| |||| |||||||||||||    
T  32851911 ccttagatgattttgagtgcctgaatatgtataataatgattag 32851868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 386038 - 386096
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  386038 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 386096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 226
Target Start/End: Complemental strand, 6190782 - 6190697
Alignment:
Q  140 tcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttgctaagagttgaaccttggggtagca 226  Q
    |||||||||||||| ||| |||||| ||||||| |||||||||| || ||| |||| || ||   ||||||||||||||| ||||||    
T  6190782 tcgcgagtgacccaaaaatagagtgacttgtta-gattttgcgacctttgttgcacgagctgtcgagagttgaaccttggcgtagca 6190697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 7900855 - 7900913
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  7900855 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 7900913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 15321778 - 15321836
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  15321778 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 15321836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 17333815 - 17333749
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||| ||||||||||||||| ||||  ||||||||||||| |||  | |||| |||||||||||    
T  17333815 ttagatgattttgagtgcctgaatatgtacaataatgattaggcaagtttttagattgagattgaac 17333749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 32306582 - 32306624
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 45  Q
    ||||||| |||||||||||| ||||||| ||||||||||||||    
T  32306582 ttagatggttttgagtgcctaaacatgtataataatgattagg 32306624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 40471907 - 40471837
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||| |||||||| || |||||||||||    
T  40471907 ccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacct 40471837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 51493502 - 51493560
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  51493502 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 51493560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 40478580 - 40478511
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  40478580 ccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 40478511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 53081760 - 53081829
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| || ||||||||| ||||||| |||||||||||| | |||  | |||| ||||||||||||||    
T  53081760 ttagatgattctgagtgcctaaacatgtataataatgattaagcaagtttttagattgagattgaacctg 53081829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 16956334 - 16956378
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtag 56  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||    
T  16956334 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 16956378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 46640043 - 46640111
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    ||||||| || |||||||||||||||||  ||||||||||||| |||  | |||| ||||||| |||||    
T  46640043 ttagatgattctgagtgcctgaacatgtaaaataatgattaggcaagtttttagattgagattaaacct 46640111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 195; Significance: 1e-106; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 6759717 - 6759471
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattt-agaatgaaacttttggaa 99  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||| ||||||||||||||||||    
T  6759717 ccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacttggaaatattttagaatgaaacttttggaa 6759618  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||    
T  6759617 atctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaggattttgcaatctgtgtcgcacaagt 6759518  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    ||||||||||||||||||||||||| | ||||| |||||||||||||    
T  6759517 tgctaagagttgaaccttggggtagtattgagacttaatgatgatgt 6759471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 16092002 - 16092247
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||  ||||||||||||     
T  16092002 ccttagatgcttttgagtgcatgaacatgtctaataatgattaggaaagaatgtagaatgagattaaacctgaaaagatttaaaaaaaaacttttggaat 16092101  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||    
T  16092102 tctgacctgaactcgccacggcgagcagaggctctcgcctcccgagtgacccagaaacagagtgccctgttaggattttgcgatctgtgtcacacaagtt 16092201  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | |||||||||||||||||||||  | ||||| |||| ||||||||    
T  16092202 gttaagagttgaaccttggggtaatattgagacttaaggatgatgt 16092247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 28648705 - 28648950
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| || |||||||||||||||||| ||| |||     
T  28648705 ccttagatgcttttgagtgcctgaacatgtctaataatgattatgaaagaatgtaggatgagattgaacatggaaagatttagaatgaaaccttttgaat 28648804  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    | |||||||||||||||||| ||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||| || ||| |||| ||||    
T  28648805 tttgacctgaactcgccacggcgagcagaggctctcgccttgcgcatgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagtt 28648904  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | |||||||||||||||||||| | ||||| |||||||||||||    
T  28648905 gttgagagttgaaccttggggtagtattgagacttaatgatgatgt 28648950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 18878898 - 18879143
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| ||| |    
T  18878898 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtggga 18878997  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  || ||| |||| |||    
T  18878998 ttctgacctgaactcgccaagacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtta-gattttgcggcctttgttgcacgagt 18879096  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    ||   |||||||||||||||| |||||   ||| |||||||||||||    
T  18879097 tgtcgagagttgaaccttgggatagcatcaagacttaatgatgatgt 18879143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 22875525 - 22875280
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattt-agaatgaaacttttggaa 99  Q
    ||||||||||||||||| | || ||||||| ||||||||||||||||||| ||||||| ||| ||||||||| |||||||| ||||||||||||| ||||    
T  22875525 ccttagatgcttttgagcgtctaaacatgtttaataatgattaggaaagattgtagaacgaggttgaacctggaaagattttagaatgaaactttgggaa 22875426  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||    
T  22875425 -tctgacctgaactcgccatgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagggctttgcgatctatgtcgcacaagt 22875327  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    || |||||||||||||||||||||| | |||||  ||||| ||||||    
T  22875326 tgttaagagttgaaccttggggtagtattgagatgtaatggtgatgt 22875280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 21923589 - 21923834
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| | |     
T  21923589 ccttagatgcttttgagtgtctgaacatgtctaataatgattaggacagaatgtaggatgagattgaacctgaaaagatttagaatgaaactttttggat 21923688  T
Q  101 tctga-cctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
    ||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||| || | |||    
T  21923689 tctgaccctgaactcgccacggtgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttagg-ttttgcgacctttgttgcccgagt 21923787  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
     | | |||||||||||||| ||||| | | ||| |||||||||||||    
T  21923788 agttgagagttgaaccttgaggtagtattaagacttaatgatgatgt 21923834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 22627195 - 22626950
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||| ||||||||| |||| ||||    
T  22627195 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctcgaaagattgtagaatgaaccttt-ggaa 22627097  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
    |||||||| ||||| |||||| |||||||||||||||||||||||||||| | |||||||||||| ||||||||| |||||||| || ||| |||| |||    
T  22627096 atctgacccgaacttgccacggcgagcagaggctctcgcctcgcgagtgatctagaaacagagtgtcttgttaggtttttgcgacctttgttgcacgagt 22626997  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    || | |||||||||||||||||||| | ||||| ||||||| |||||    
T  22626996 tgttgagagttgaaccttggggtagtattgagacttaatgaggatgt 22626950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 20536668 - 20536423
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| ||| |    
T  20536668 ccttagatgcttttgagtgcctgaacatgtctgataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttatggga 20536569  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||| || ||| |||| |||    
T  20536568 ttctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtgacttattagg-ttttgcgacctttgttgcacgagt 20536470  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    ||   || ||||||||||||||||| | | ||| ||||||| |||||    
T  20536469 tgtcgagtgttgaaccttggggtagtattaagacttaatgaggatgt 20536423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 23406841 - 23406622
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||| ||||||||||||| ||| |    
T  23406841 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaaagattgtagaatgaaacttgtggga 23406742  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| || || ||| |||| |||    
T  23406741 ttctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttagg-ttttgtgacctttgttgcacgagt 23406643  T
Q  200 tgctaagagttgaaccttggg 220  Q
    |  | |||||||||| |||||    
T  23406642 tattgagagttgaactttggg 23406622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 41598644 - 41598421
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||| ||||| |    
T  41598644 ccttagatgcttttgagtgcctgaacatgtctaataatgattatgaaagaatgtagaatgagattgaacctggaaagattttagaatgaaac-tttggga 41598546  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||| ||  ||||| ||| |  ||||||||||||||||| || ||||| |||    
T  41598545 atctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacctagttacagaatgcttgtttaggattttgcgatctttgccgcacgagt 41598446  T
Q  200 tgctaagagttgaaccttggggtag 224  Q
     | | ||||||||||||||||||||    
T  41598445 cgttgagagttgaaccttggggtag 41598421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 18818071 - 18818315
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| || ||||||||||||||      
T  18818071 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacctggaaagattgtaaaatgaaacttttgg-t 18818169  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| || ||| |||| |||    
T  18818170 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttagg-ttttgcgacctttgttgcacgagt 18818268  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    || | |||||||||  || |||||| | | ||| ||||||| |||||    
T  18818269 tgttgagagttgaaatttagggtagtattaagacttaatgaggatgt 18818315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 23649013 - 23648768
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaac-ttttggaa 99  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||| ||||||||    
T  23649013 ccttagatgcttttgagtgactgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctgaaaagacttagaatgaaacattttggaa 23648914  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     ||||||| |||||||||| | ||| ||||||||||||||||| |||| |||||||||||||||| ||||||||| || ||||| || ||| |||| |||    
T  23648913 ttctgacc-gaactcgccatggcgatcagaggctctcgcctcgtgagtaacccagaaacagagtgacttgttaggtttatgcgacctttgttgcacgagt 23648815  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    || | |||||||||||||||||||| | | |||  ||||||||||||    
T  23648814 tgttgagagttgaaccttggggtagtattaagacctaatgatgatgt 23648768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 5865938 - 5866082
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |  ||    
T  5865938 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaa 5866037  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||||| |||||||||| | |||||||||||||||||||||||||    
T  5866038 tctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 5866082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 17141373 - 17141229
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |  ||    
T  17141373 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaa 17141274  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    || |||| |||||||||| | |||||||||||||||||||||||||    
T  17141273 tcagacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 17141229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 25362812 - 25363024
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| |||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||          ||||||||||| ||| |     
T  25362812 ccttagatgcctttgagtgactgaacatgactaataatgattaggaaagaatgtaggatgagattgaacctg----------gaatgaaacttgtgggat 25362901  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||| | ||||||||||||||||||||| ||||||||| ||||||||||||||||| | || ||||||| || | | |||| ||||    
T  25362902 tctgacctgaactcgccatggcgagcagaggctctcgcctcgagagtgacccggaaacagagtgccttgtga-gactttgcgacctttcttgcacgagtt 25363000  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    | | ||||||||||||| ||||||    
T  25363001 gttgagagttgaacctttgggtag 25363024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 21918671 - 21918843
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||| |||         |||||||| ||| |     
T  21918671 ccttagatgctttggagtgcctgaacatgtctaataatgattagaaaagaatgtaggaagagattgaacctggaaa---------tgaaacttgtgggat 21918761  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcga 183  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||    
T  21918762 tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacttgtta-gattttgcga 21918843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 7373209 - 7373084
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||| ||||||||||||| || ||    
T  7373209 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgaaattgaacctggaaagattgtagaatgaaacttgtgaaa 7373110  T
Q  100 atctgacctgaactcgccacgacgag 125  Q
     |||||||||||||||||||| ||||    
T  7373109 ttctgacctgaactcgccacggcgag 7373084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 21249841 - 21249697
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||| ||||| || |||||||| ||| |  ||    
T  21249841 ccttagatgcttttgagtgcccaaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagacttggaatgaaaatttggagaa 21249742  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||||| |||||||||| | |||||||||||||||||||||||||    
T  21249741 tctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 21249697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 21255679 - 21255535
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| || |||||||| ||| |  ||    
T  21255679 ccttagatgcttttgagtgcccaaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagacttggaatgaaaatttggagaa 21255580  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||||| |||||||||| | ||||||| |||||||||||||||||    
T  21255579 tctgacc-gaactcgccatggcgagcagcggctctcgcctcgcgag 21255535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 21491452 - 21491308
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||| ||| |  ||    
T  21491452 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctagaaagacttagaatgaaaatttagagaa 21491353  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    |||||||  |||| |||| | |||| ||||||||| ||||||||||    
T  21491352 tctgacc-aaacttgccatggcgagtagaggctcttgcctcgcgag 21491308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 31971704 - 31971492
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||          |||| |||||| ||  |     
T  31971704 ccttagatgcttttgtgtgcctgaacatgtctaataatgattaggaaaggatgtaggatgagattgaacctg----------gaattaaacttgtgagat 31971615  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||| || |||||||||||| || ||||||||| |||||||||| |||||| ||||||| |||||||||| || ||| |||| ||||    
T  31971614 tctgacctgaactcgccccggcgagcagaggctgtcacctcgcgagcgacccagaaatagagtgacttgtta-gattttgcgacctttgttgcacgagtt 31971516  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    |   |||| |||||||| ||||||    
T  31971515 gtcgagagctgaacctttgggtag 31971492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 16199319 - 16199530
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||          ||||| ||||| | |||      
T  16199319 ccttggatgcttttgagtgccttaacatgtcttataatgattaggaaagaatgtaggatgagattgaacct----------agaattaaactgtgggat- 16199407  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||||  |||||||| ||||||||||||||||||||||| |||||||||| ||| || ||||||||||| || ||| |||| ||||    
T  16199408 tctgacctgaactcgccacagcgagcagacgctctcgcctcgcgagtgacccaaaaacagagtgacttatt-ggattttgcgacctttgttgcacgagtt 16199506  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    |   ||||||||||| | ||||||    
T  16199507 gtcgagagttgaacccttgggtag 16199530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 45130692 - 45130763
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  45130692 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 45130763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 21674155 - 21674076
Alignment:
Q  11 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaa 89  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||| |||||||||||    
T  21674155 ttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatgaa 21674076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 26355359 - 26355504
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||| ||| || ||| |||||||||||||| ||||| |||||||||||  |||  |||    
T  26355359 ccttaaatgtttttgagtgcctgaacatgtctaataatgattaggagagattgaagattgagattgaacctggaaagactttagaatgaatttttgtgaa 26355458  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
     | | ||||||||| |||| | |||| ||||||||||||||| ||||    
T  26355459 ttgt-acctgaacttgccatggcgagtagaggctctcgcctcacgag 26355504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 39834292 - 39834147
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct-gaaaagatttagaatgaaacttttggaa 99  Q
    ||||||||| |||||||||||| ||| ||| | ||||||||||||||||| |||||| ||||||||||||| ||| || || |||||||| | ||||  |    
T  39834292 ccttagatgtttttgagtgcctaaacttgtatgataatgattaggaaagattgtagattgagattgaacctggaatagtttaagaatgaatc-tttgtga 39834194  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
     |   |||||||||||||| | |||| ||||||||||||||||||||    
T  39834193 gttgcacctgaactcgccatggcgagtagaggctctcgcctcgcgag 39834147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 19801088 - 19801159
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||| |  ||||| ||||||||||||    
T  19801088 ccttagatgcatatgagtgcctgaacatgtctaataatgattaggaaagactagagaataagattgaacctg 19801159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 38854912 - 38854983
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| || ||| | ||||| ||||||    
T  38854912 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattaagatttaacctg 38854983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 246
Target Start/End: Complemental strand, 7373088 - 7372985
Alignment:
Q  142 gcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttgctaagagttgaaccttggggtagcactgagaattaatgat 241  Q
    ||||||||||||||||||||||| ||||||||| |||||||| || ||| |||| ||||| | |||||||||| ||||||| | | ||||| |||||||     
T  7373088 gcgagtgacccagaaacagagtgtcttgttagg-ttttgcgacctttgttgcacgagttgttgagagttgaactttggggtggtagtgagacttaatgag 7372990  T
Q  242 gatgt 246  Q
    |||||    
T  7372989 gatgt 7372985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 6520828 - 6520754
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaa 75  Q
    ||||||||| ||||||||| |||||||||||||||||| ||||||||||| || ||| | ||| |||||||||||    
T  6520828 ccttagatgtttttgagtgtctgaacatgtctaataataattaggaaagattggagattaagactgaacctgaaa 6520754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 20499118 - 20499048
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctga 73  Q
    ||||||| |||||||||||||||||||| |||||||||||||| |||  | |||| |||||||||||||||    
T  20499118 ttagatgattttgagtgcctgaacatgtataataatgattaggtaagtttttagattgagattgaacctga 20499048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 21414888 - 21414956
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||||| ||||||||||||||| |||   | |||||||||||||||| ||||||||||||||||||    
T  21414888 ccttagatgtttttgagtgcctgaagatgcacactaatgattaggaaagattgtagaatgagattgaac 21414956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 37116882 - 37116812
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctga 73  Q
    ||||||| ||||||||||||||| |||| |||||||||||||| |||  | |||| |||||||||||||||    
T  37116882 ttagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctga 37116812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 23760511 - 23760572
Alignment:
Q  11 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    |||||||| ||||||||||||||||||||||||||||| | || | | ||||||||||||||    
T  23760511 ttttgagttcctgaacatgtctaataatgattaggaaatattggatattgagattgaacctg 23760572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 17266579 - 17266647
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    ||||||| ||||||||||||||| |||| |||||||||||||| |||  | |||| |||||||||||||    
T  17266579 ttagatgtttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacct 17266647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 201
Target Start/End: Original strand, 45130793 - 45130859
Alignment:
Q  134 ctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttg 201  Q
    ||||||||||||||||||||||||||||||| ||| ||| |||||||||| || ||| |||| |||||    
T  45130793 ctcgcctcgcgagtgacccagaaacagagtgacttatta-gattttgcgacctttgttgcacgagttg 45130859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 982989 - 983059
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctga 73  Q
    ||||||| ||||||||| |||||||||| || || ||||||||||||  | |||| |||||||||||||||    
T  982989 ttagatgattttgagtgtctgaacatgtatattagtgattaggaaagtttttagattgagattgaacctga 983059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 24353550 - 24353489
Alignment:
Q  11 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||||||||| |||| |||||||||||||| |||  | |||| ||||||||||||||    
T  24353550 ttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctg 24353489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 40492438 - 40492506
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    ||||||| ||||||||||||||| |||| ||| |||||||||| |||  | |||| |||||||||||||    
T  40492438 ttagatgattttgagtgcctgaatatgtataagaatgattaggcaagtttttagattgagattgaacct 40492506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 13507670 - 13507713
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattag 44  Q
    ||||||||| ||||||||||||||| |||| |||||||||||||    
T  13507670 ccttagatgattttgagtgcctgaatatgtataataatgattag 13507713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 13597202 - 13597245
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattag 44  Q
    ||||||||| ||||||||||||||| |||| |||||||||||||    
T  13597202 ccttagatgattttgagtgcctgaatatgtataataatgattag 13597245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 20527871 - 20527812
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  20527871 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 20527812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 45
Target Start/End: Original strand, 17085770 - 17085804
Alignment:
Q  11 ttttgagtgcctgaacatgtctaataatgattagg 45  Q
    |||||||||||||||||||| ||||||||||||||    
T  17085770 ttttgagtgcctgaacatgtataataatgattagg 17085804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 18865753 - 18865695
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  18865753 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 18865695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 224
Target Start/End: Original strand, 22963249 - 22963303
Alignment:
Q  170 ttaggattttgcgatctatgtcgcacaagttgctaagagttgaaccttggggtag 224  Q
    ||||||||||||||||| |||||||| || || || ||||||| |||||||||||    
T  22963249 ttaggattttgcgatctttgtcgcacgagatgttatgagttgacccttggggtag 22963303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 22996379 - 22996313
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||| ||||||||||||||| |||| ||| |||||||||| |||  | |||| |||||||||||    
T  22996379 ttagatgattttgagtgcctgaatatgtataagaatgattaggcaagtttttagattgagattgaac 22996313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 2418462 - 2418531
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| ||||||||||||||| |||| ||| |||||||||| |||  | |||| ||| ||||||||||    
T  2418462 ttagatggttttgagtgcctgaatatgtataagaatgattaggcaagtttttagattgaaattgaacctg 2418531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 16882845 - 16882914
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||| ||||| || ||||| ||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  16882845 ccttggatgccttagagtgtctgaacatacctagtattgattaggaatgaatgtagaatcagattgaacc 16882914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 17439092 - 17439161
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| ||||||||||||||| ||||  ||||||||||||| |||  | |||| || |||||||||||    
T  17439092 ttagatgattttgagtgcctgaatatgtacaataatgattaggcaagtttttagattgggattgaacctg 17439161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 22010435 - 22010487
Alignment:
Q  94 ttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||||||||| | || |||||||| | |||||||| ||||||||||||||||    
T  22010435 ttggaaatctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 22010487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 192; Significance: 1e-104; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 7 - 246
Target Start/End: Complemental strand, 9078406 - 9078167
Alignment:
Q  7 atgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaatctgac 106  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||| ||| ||||||    
T  9078406 atgcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtagaatgagattgaacctggaaagatttagaatgaaaccttttgaattctgac 9078307  T
Q  107 ctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttgctaag 206  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  9078306 ctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctgtgtcgcacaagttgttaag 9078207  T
Q  207 agttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
     ||||||||||||||||| | ||||| |||||||||||||    
T  9078206 ggttgaaccttggggtagtattgagacttaatgatgatgt 9078167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 21985808 - 21986053
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||     
T  21985808 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagatttagaatgaaacttttggaat 21985907  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||| || ||| |||| ||||    
T  21985908 tctgacctgaactcgccacggcaagcagaggccctcgcctcgcgagtgacccagaaacagagtgtcttgttaggtttttgcgacctttgttgcacgagtt 21986007  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | |||||||||||||||||||| | | ||| || ||||||||||    
T  21986008 gttgagagttgaaccttggggtagtattcagacttgatgatgatgt 21986053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 25421992 - 25421747
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||  ||| ||||||||| ||||| ||||||||||||||||||||| |||||    
T  25421992 ccttagatgcttttgagtgcctgaacatgtctattaatgattaggaaagaacttaggatgagattggacctggaaagatttagaatgaaactttcggaaa 25421893  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||| ||||||||||||| |||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| || ||| |||| ||||    
T  25421892 tctgacttgaactcgccacggcgagtagaggctctcgcctcgcgagtgacctagaaaccgagtgccttgttaggattttgcgacctttgttgcacgagtt 25421793  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | |||||||||||||||||||||| ||||| |||||||||||||    
T  25421792 gttgagagttgaaccttggggtagcattgagacttaatgatgatgt 25421747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 1096927 - 1096682
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattt-agaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||  |||||||| |||||||||    
T  1096927 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaatctggaaagattgcagaatgaa-cttttggaa 1096829  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||| ||||||||||||    
T  1096828 atctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagaatgcctttttagaattttgcgatctctgtcgcacaagt 1096729  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    || ||| ||||| |||||||||||| | ||||| ||||||| |||||    
T  1096728 tgttaaaagttggaccttggggtagtattgagacttaatgaggatgt 1096682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 25431854 - 25431609
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||| ||| ||||||||| ||||| |||||||||||||||||||||||||||    
T  25431854 ccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagaatttaggatgagattggacctggaaagatttagaatgaaacttttggaaa 25431755  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||| ||||||||||||| |||| |||||||||| ||||||||||||||||||||  |||||||||||||||||||||||| || |||  ||| ||||    
T  25431754 tctgacttgaactcgccacggcgagtagaggctctcacctcgcgagtgacccagaaatcgagtgccttgttaggattttgcgacctttgttacacgagtt 25431655  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | |||||||||||||| ||||||| ||||| |||||||||||||    
T  25431654 gttgagagttgaaccttgaggtagcattgagacttaatgatgatgt 25431609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 24529681 - 24529435
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| || |||||||||||||||||||    
T  24529681 ccttagatgcttttcagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaaggttgtagaatgaaacttttggaa 24529582  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||| || ||| |||| |||    
T  24529581 ttctgatctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagagtcttgttaggtttttgcgacctttgttgcactagt 24529482  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
     | | |||||||||||||||||||| | ||| | |||||||||||||    
T  24529481 agttgagagttgaaccttggggtagtattgaaacttaatgatgatgt 24529435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 13095954 - 13095709
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||| ||| |     
T  13095954 ccttagatgcttttgaaagcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaaagatttagaatgaaacttgtgggat 13095855  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||||  ||||||||||| |||||||||||||||||| |||||||||||| ||||||||| |||||||| || ||| |||| |||     
T  13095854 tctgacctgaactcgccacagcgagcagaggccctcgcctcgcgagtgacctagaaacagagtgacttgttaggtttttgcgacctttgttgcacgagtc 13095755  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | |||||||||||||||||||| | | ||| |||||||||||||    
T  13095754 gttgagagttgaaccttggggtagtattaagacttaatgatgatgt 13095709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 24494028 - 24493783
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||| ||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| | |     
T  24494028 ccttaaatgcttttgaacgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagatttagaatgaaactttttggat 24493929  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||||| |||||||||||| |||||||| |||| ||||| |||||||||| ||||||||| |||||||| || ||| |||| ||||    
T  24493928 tctgacctgaactcgccacggcgagcagaggctttcgcctcgtgagtaacccataaacagagtgtcttgttaggtttttgcgacctttgttgcacgagtt 24493829  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | |||||||||||||||||||| | | ||| ||||| |||||||    
T  24493828 gttgagagttgaaccttggggtagtattaagacttaataatgatgt 24493783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 13025770 - 13025525
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||| |||||||  |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||| ||| |     
T  13025770 ccttagatacttttgaaagcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaaagatttagaatgaaacttgtgggat 13025671  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||||  |||||| |||| |||||||||||||||||| |||||||||||| ||||||||| |||||||| || ||| |||| | ||    
T  13025670 tctgacctgaactcgccacagcgagcaaaggccctcgcctcgcgagtgacctagaaacagagtgacttgttaggtttttgcgacctttgttgcacgattt 13025571  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | |||||||||||||||||||| | | ||| |||||||||||||    
T  13025570 gttgagagttgaaccttggggtagtattaagacttaatgatgatgt 13025525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 23390157 - 23390402
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| ||| |    
T  23390157 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtggga 23390256  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     |||||||||||||||||| | |||| ||||||| ||||||| ||||||||||  |||||||||||||||||| ||||||| || || ||| |||| |||    
T  23390257 ttctgacctgaactcgccatggcgagtagaggctatcgcctcacgagtgaccctaaaacagagtgccttgtta-gattttgtgacctttgttgcacgagt 23390355  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    ||   |||||||||||||||| ||| | | ||| ||||||| |||||    
T  23390356 tgtcgagagttgaaccttgggatagtattaagacttaatgaggatgt 23390402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 11580906 - 11581129
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||| |||||||| |||| ||||  |    
T  11580906 ccttagaagcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggatagattttagaataaaac-tttgaga 11581004  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||||||   ||||| ||| |  ||||||||||||||||| ||||| || |||    
T  11581005 atctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccatttacagaatgcttgtttaggattttgcgatctttgtcgtacgagt 11581104  T
Q  200 tgctaagagttgaaccttggggtag 224  Q
     | | ||||||||||||||||||||    
T  11581105 cgttgagagttgaaccttggggtag 11581129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 36154489 - 36154712
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| | ||| |||||||| |||| ||||  |    
T  36154489 ccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtagagtgagattgaacctggatagattttagaataaaac-tttgaga 36154587  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
    ||||||||||||||||||| | |||| ||||||||||||||||||||||||| |   ||||| ||| |  ||||||||||||||||| |||||||| |||    
T  36154588 atctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagtgacctatttacagaatgcttgtttaggattttgcgatctttgtcgcacgagt 36154687  T
Q  200 tgctaagagttgaaccttggggtag 224  Q
     | | ||||||||||||||||||||    
T  36154688 cgttgagagttgaaccttggggtag 36154712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 21292642 - 21292831
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||          |||| |||||| |||||     
T  21292642 ccttagatgcttttgagtgcctgaacatgtctaataataattaggaaagaatgtaggatgagattgaacctg----------gaattaaacttgtggaat 21292731  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||| ||| |||||||||| || ||| |||| ||||    
T  21292732 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaatagagtgacttttta-gattttgcgacctttgttgcacgagtt 21292830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 8286514 - 8286748
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| |||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||          ||||||||||| ||| |     
T  8286514 ccttagatgcatttgagtgccggaacatgtctaataatgattaagaaagaatgtaggatgagattgaacctg----------gaatgaaacttgtgggat 8286603  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||| |||| |||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| || ||| ||   ||||    
T  8286604 tctgacctaaactagccatggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgcttgagtt 8286702  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | ||||||||||||| |||||| | | ||| ||||||| |||||    
T  8286703 gttgagagttgaacctttgggtagtattaagacttaatgaagatgt 8286748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 22119854 - 22119998
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| |  ||    
T  22119854 ccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggagaa 22119953  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||| |||||||||||| | |||||||||||||||||||||||||    
T  22119954 tctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 22119998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 19660498 - 19660643
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttgga-a 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||| |||||||||||  |||||| |    
T  19660498 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtggaatgagattaaacctggaaagacttagaatgaaaactttggaga 19660597  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    |||| ||| |||||||||| | |||||||||||||||||||||||||    
T  19660598 atctaacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 19660643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 22075468 - 22075240
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| | ||||||||          ||||||||||| ||        
T  22075468 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggtaagaatgtaggatgaaaatgaacctg----------gaatgaaacttgtgaggt 22075379  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccag-aaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||  |||||||| || ||| |||| |||    
T  22075378 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaaacagagtgacttgttag--ttttgcgacctttgttgcacgagt 22075281  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatga 240  Q
    || | ||  || |||||| |||||||| | ||| |||||||    
T  22075280 tgttgaggattaaacctttgggtagcattaagacttaatga 22075240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 24766998 - 24767142
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| ||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||| ||| ||||| ||||||||||||||| |  ||    
T  24766998 ccttagatgcctttgagtgcctgaacatgtctaatattgattacgaaagaatgtaggatgagattgaatctggaaagacttagaatgaaactttggagaa 24767097  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||| ||||||||| || | |||||||||||||||||||||||||    
T  24767098 tctga-ctgaactcgtcatggcgagcagaggctctcgcctcgcgag 24767142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 3 - 170
Target Start/End: Original strand, 22107047 - 22107204
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaatc 102  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||          ||| |||||| ||| | ||    
T  22107047 ttagatgcgtttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggacgagattgaacctga----------aattaaacttgtgggattc 22107136  T
Q  103 tgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgt 170  Q
    |||||||||||| ||| | ||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  22107137 tgacctgaactcaccatggcgagcagaggctctcgcctcgcgagtgacccggaaatagagtgccttgt 22107204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 21566004 - 21565863
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||| ||||||||| || ||| |  |    
T  21566004 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatg-aattttcgtga 21565906  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcg 142  Q
    ||   |||||||||||||| | |||||||||||||||||||||    
T  21565905 attgtacctgaactcgccatggcgagcagaggctctcgcctcg 21565863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 3 - 219
Target Start/End: Complemental strand, 22144508 - 22144292
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattta-gaatgaaacttttggaaat 101  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||||||| | |||| |||||||||||||| ||  ||||| ||||| |  |||||| | |    
T  22144508 ttagatgattttgagtgcctgaacatgtgtaacaatgattaggaaagattctagattgagattgaacctggaataatttaagaatggat-ttttgggagt 22144410  T
Q  102 ctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttg 201  Q
       ||||||||||||||   |||| |||||||||||||||||||||  |||||  ||||| ||| |  ||||||||||||||||| |||||||| |||||    
T  22144409 tacacctgaactcgccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaatgcttgtttaggattttgcgatctttgtcgcacgagttg 22144310  T
Q  202 ctaagagttgaaccttgg 219  Q
     | |||||||||||||||    
T  22144309 ttgagagttgaaccttgg 22144292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 22959194 - 22959339
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| | ||| |||||||||||  |||| |      
T  22959194 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggagagactttagaatgaa--tttttgtg 22959291  T
Q  100 atctg-acctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    | ||| |||||||||||||| | |||| ||||||||||||||||||||    
T  22959292 aactgaacctgaactcgccatggcgagtagaggctctcgcctcgcgag 22959339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 21871232 - 21871377
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||| ||||| ||||||||||||||| ||||||| | |||||  |||||||  |    
T  21871232 ccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagagtgtaggatgagattgaacctggaaagattatggaatg-gacttttgtga 21871330  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
     ||||||||| |||||||| | |||| |||||||| || ||||||||    
T  21871331 ttctgacctgtactcgccatggcgagtagaggctcccggctcgcgag 21871377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 21875512 - 21875657
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||| ||||| ||||||||||||||| ||||||| | |||||  |||||||  |    
T  21875512 ccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagagtgtaggatgagattgaacctggaaagattatggaatg-gacttttgtga 21875610  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
     ||||||||| |||||||| | |||| |||||||| || ||||||||    
T  21875611 ttctgacctgtactcgccatggcgagtagaggctcccggctcgcgag 21875657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 19669360 - 19669219
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||| ||  |||||||||||||| || ||||| |||||||||||  |||||  |    
T  19669360 ccttagatgtttttgagtgtctgaacatgtctaataatgattaggaaagattggggaatgagattgaacgtggaaagactttagaatgaattttttgtga 19669261  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctc 141  Q
    ||   |||||||||||||| | || | |||||||||||||||    
T  19669260 attgtacctgaactcgccatggcgtgtagaggctctcgcctc 19669219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 21329156 - 21329326
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattta-gaatgaaacttttggaa 99  Q
    ||||||||| ||||||||||||||||||||||| | |||||||| ||||| | |||| |||||||||||||| ||  ||||| ||||| || |||||| |    
T  21329156 ccttagatgtttttgagtgcctgaacatgtctagttatgattagaaaagattctagattgagattgaacctggaataatttaggaatg-aatttttggga 21329254  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtt 171  Q
     |   || |||||||||||   |||| ||||||||||||||||||| | ||| ||  ||||| |||||||||    
T  21329255 gttgcacttgaactcgccatagcgagtagaggctctcgcctcgcgaattacctagttacagaatgccttgtt 21329326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 2 - 171
Target Start/End: Original strand, 5888837 - 5889006
Alignment:
Q  2 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct-gaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||| |||||||||||||||| ||| | || |||||||||||||| |||||| ||||||||||| | ||| || || |||||||| | ||||  |     
T  5888837 cttagatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacatggaatagtttaagaatgaatc-tttgtgag 5888935  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtt 171  Q
    |   |||||||||||||| | |||| ||||||||||||||||||||  |||||   ||||| |||||||||    
T  5888936 ttgcacctgaactcgccatggcgagtagaggctctcgcctcgcgagctacccatttacagaatgccttgtt 5889006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 21498678 - 21498749
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    |||| |||| |||||||||||||||||||| ||||||| ||||||| ||| |||||| ||||||||||||||    
T  21498678 ccttggatgtttttgagtgcctgaacatgtataataattattaggagagattgtagattgagattgaacctg 21498749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 20026526 - 20026592
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||| |||||||||||||||||||| |||||||||||||| |||  | |||| |||||||||||    
T  20026526 ttagatgattttgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaac 20026592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 22177807 - 22177876
Alignment:
Q  4 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctga 73  Q
    |||||| ||||||||||||||| |||| |||||||||||||| |||  | |||| |||| ||||||||||    
T  22177807 tagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagtttgaacctga 22177876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 41294112 - 41294176
Alignment:
Q  6 gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    ||||| || ||||||||||||||| ||| || |||||||||| |||||||| || ||||||||||    
T  41294112 gatgccttagagtgcctgaacatgcctagtattgattaggaatgaatgtaggatcagattgaacc 41294176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 21294947 - 21295006
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  21294947 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 21295006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 21741204 - 21741275
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||  |||||||||||||||| ||| | || |||| ||||||||| | |||| ||||||||||||||    
T  21741204 ccttagatatttttgagtgcctgaacttgtatgatgatgaataggaaagattatagattgagattgaacctg 21741275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 15441638 - 15441696
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  ||||||||||    
T  15441638 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacc 15441696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 25406847 - 25406789
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  25406847 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 25406789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 25535409 - 25535351
Alignment:
Q  13 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    ||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  25535409 ttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 25535351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 26732421 - 26732463
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 45  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||    
T  26732421 ttagatgattttgagtgcctgaacatgtataagaatgattagg 26732463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 26740234 - 26740276
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 45  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||    
T  26740234 ttagatgattttgagtgcctgaacatgtataagaatgattagg 26740276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 17284499 - 17284430
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  17284499 ccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 17284430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 154
Target Start/End: Original strand, 21501919 - 21501968
Alignment:
Q  105 acctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccag 154  Q
    ||||||||||||||   |||| ||||||||||||||||||||| ||||||    
T  21501919 acctgaactcgccatagcgagtagaggctctcgcctcgcgagttacccag 21501968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 22588516 - 22588459
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    |||||||||||||||||  ||| || |||||||||| |||||||| || |||||||||    
T  22588516 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaac 22588459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 23336973 - 23337030
Alignment:
Q  13 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    ||||||||||||||||  ||| ||||||||||||| |||||||| |  ||||||||||    
T  23336973 ttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacc 23337030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 25574056 - 25574097
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattag 44  Q
    ||||||| |||||||||||||||||||| ||| |||||||||    
T  25574056 ttagatggttttgagtgcctgaacatgtataagaatgattag 25574097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 25575249 - 25575290
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattag 44  Q
    ||||||| |||||||||||||||||||| ||| |||||||||    
T  25575249 ttagatggttttgagtgcctgaacatgtataagaatgattag 25575290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 25576442 - 25576483
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattag 44  Q
    ||||||| |||||||||||||||||||| ||| |||||||||    
T  25576442 ttagatggttttgagtgcctgaacatgtataagaatgattag 25576483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 26011697 - 26011766
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| || |||||| || ||||||| |||||||||||| |||||| | || | ||||||||||||||    
T  26011697 ttagatgattatgagtgtctaaacatgtgtaataatgattaagaaagattctaaattgagattgaacctg 26011766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 123062 - 123114
Alignment:
Q  94 ttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||||| ||| |||| |||||||| | |||||||| ||||||||||||||||    
T  123062 ttggaaacctggcctgtactcgccatggcgagcagatgctctcgcctcgcgag 123114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 19472476 - 19472528
Alignment:
Q  94 ttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||||| ||| | || |||||||||| |||||||| ||||||||||||||||    
T  19472476 ttggaaagctggcttgtactcgccacggcgagcagatgctctcgcctcgcgag 19472528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 19992305 - 19992261
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtag 56  Q
    |||||||||||||||||| ||| || |||||||||| ||||||||    
T  19992305 tttgagtgcctgaacatgcctagtattgattaggaatgaatgtag 19992261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 147
Target Start/End: Original strand, 20026706 - 20026746
Alignment:
Q  107 ctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
    |||||||||||||  |||| |||||||||||||||||||||    
T  20026706 ctgaactcgccacagcgagtagaggctctcgcctcgcgagt 20026746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 20805910 - 20805858
Alignment:
Q  94 ttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||||||||| | || |||||||| | |||||||| ||||||||||||||||    
T  20805910 ttggaaatctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 20805858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 22334501 - 22334545
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtag 56  Q
    |||||||||||||||||| ||| || |||||||||| ||||||||    
T  22334501 tttgagtgcctgaacatgcctagtattgattaggaatgaatgtag 22334545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 23201732 - 23201680
Alignment:
Q  94 ttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    |||| |||||| |||| |||||||| | |||||||| ||||||||||||||||    
T  23201732 ttgggaatctggcctgtactcgccatggcgagcagatgctctcgcctcgcgag 23201680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 23535346 - 23535398
Alignment:
Q  94 ttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    |||| |||||||| || |||||||| | |||||||| ||||||||||||||||    
T  23535346 ttgggaatctgacttgtactcgccatggcgagcagatgctctcgcctcgcgag 23535398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 31342466 - 31342414
Alignment:
Q  94 ttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||| |||||  |||||||||||| | |||||||| ||||||||||||||||    
T  31342466 ttggagatctgggctgaactcgccatggcgagcagatgctctcgcctcgcgag 31342414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 187; Significance: 1e-101; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 14973314 - 14973069
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattt-agaatgaaacttttggaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||| ||| |||||||||    
T  14973314 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattaaaccagaaaagattttagaaagaa-cttttggaa 14973216  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  14973215 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcaagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 14973116  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    ||||||||||||||||||||||||| | ||||| |||||||||||||    
T  14973115 tgctaagagttgaaccttggggtagtattgagacttaatgatgatgt 14973069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 18438994 - 18438749
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||     
T  18438994 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaaaatgagattgaacctggaaagatttagaatgaaacttttggaat 18438895  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| || ||| |||| ||||    
T  18438894 tctgacctgaagttgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaggtttttgcgacctttgttgcacgagtt 18438795  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | || ||||||||||||||||| | ||||| |||||||||||||    
T  18438794 gttgagtgttgaaccttggggtagtattgagacttaatgatgatgt 18438749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 3 - 246
Target Start/End: Original strand, 40213384 - 40213627
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaaat 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||| ||||||| |||    
T  40213384 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaa-cttttgggaat 40213482  T
Q  102 ctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttg 201  Q
    || |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||| |||||    
T  40213483 ctaacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagttg 40213582  T
Q  202 ctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
     | |||||| ||||||||||||| | ||||| |||||||||||||    
T  40213583 ttgagagtttaaccttggggtagtattgagacttaatgatgatgt 40213627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 14573048 - 14572803
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||    
T  14573048 ccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagacttagaatgaaacctttggaaa 14572949  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||| | |||| ||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| || ||| |||| ||||    
T  14572948 tctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagtgacctagaaacagagtaccttgttaggtttttgcgacctttgttgcacgagtt 14572849  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | |||||||||||||||||||| | | ||| |||||||||||||    
T  14572848 gttgagagttgaaccttggggtagtattaagacttaatgatgatgt 14572803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 25476046 - 25476291
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattt-agaatgaaacttttggaa 99  Q
    ||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||    
T  25476046 ccttagatgtttttgagtacctgaacatgtctaataatgattatgaaagaatgtagaatgagatcgaacctggaaagattttagaatgaaacttttggaa 25476145  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||| |||    
T  25476146 -tctgacctgaactcgccacgacgagtagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagt 25476244  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    || | |||||||||||||| ||||| | ||||| ||||||| |||||    
T  25476245 tgttgagagttgaaccttgaggtagtattgagacttaatgaggatgt 25476291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 11424424 - 11424669
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||     
T  11424424 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaataatgtagaatgagattgaacctggaaagatttagaatgaaactttttgaac 11424523  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||||| |||| |||||||||||||||||||| |||| |||||||||||| ||||||||| |||||||| || ||| |||| ||||    
T  11424524 tctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagcgacctagaaacagagtgtcttgttaggtttttgcgacctttgttgcacgagtt 11424623  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | |||||||||| ||||||||| | ||||| |||||| ||||||    
T  11424624 gttgagagttgaactttggggtagtattgagacttaatgttgatgt 11424669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 14576494 - 14576739
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||| ||||| |||||||||||| ||||||||    
T  14576494 ccttagatgcctttgagtgcctgaacatgtctaattatgattagaaaagaatgtagaatgacattgaacctggaaagacttagaatgaaacctttggaaa 14576593  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||| ||||||| |||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| || ||| |||| ||||    
T  14576594 tctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacctagaaacaaagtgccttgttaggattttgcgacctttgttgcacgagtt 14576693  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | |||||||||||||||||||| | | ||| |||||||||||||    
T  14576694 gttgagagttgaaccttggggtagtattaagatttaatgatgatgt 14576739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 17488317 - 17488071
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| | | |    
T  17488317 ccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtagga 17488218  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccag-aaacagagtgccttgttaggattttgcgatctatgtcgcacaag 198  Q
     ||||||||||| |||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||||| || ||| |||| ||    
T  17488217 ttctgacctgaaatcgccacggcgagcagaggctctcgcctcgcgagtgacctagaaaacagagtgccttgtta-gattttgcgacctttgttgcacgag 17488119  T
Q  199 ttgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    |||   |||||||||||||||| ||||| | ||| |||||||||||||    
T  17488118 ttgtcgagagttgaaccttgggatagcattaagacttaatgatgatgt 17488071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 26687347 - 26687102
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| ||| |    
T  26687347 ccttagatgcttttgagtgcctaaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtggga 26687248  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||| || ||| |||| | |    
T  26687247 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttagg-ttttacgacctttgttgcacgaat 26687149  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
     | | |||||||||| ||||||||| | || || ||||||| |||||    
T  26687148 cgttgagagttgaactttggggtagtattgggacttaatgaggatgt 26687102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 10 - 246
Target Start/End: Complemental strand, 13442725 - 13442489
Alignment:
Q  10 cttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaaatctgacct 108  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||| ||| | ||||||||    
T  13442725 cttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacct 13442626  T
Q  109 gaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttgctaagag 208  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||| |||| |||||   ||||    
T  13442625 gaacttgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtta-gattttgcgacctttgttgcacgagttgtcgagag 13442527  T
Q  209 ttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    |||||||||||| |  || | ||| |||||||||||||    
T  13442526 ttgaaccttgggatgacattaagacttaatgatgatgt 13442489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 17247947 - 17248168
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||| |    
T  17247947 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaac-tttggga 17248045  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||||||  ||||| ||| |  |||| |||||||||||| |||||||| |||    
T  17248046 atctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccagttacagaatgcttgtttagaattttgcgatctttgtcgcacgagt 17248145  T
Q  200 tgctaagagttgaaccttggggt 222  Q
     | | |||||| |||||||||||    
T  17248146 cgttgagagttaaaccttggggt 17248168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 17499799 - 17499553
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| | | |    
T  17499799 ccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgttgga 17499700  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccag-aaacagagtgccttgttaggattttgcgatctatgtcgcacaag 198  Q
     ||||||||||| ||||||||  ||||||||||||||||||| | ||||||| || |||||||||||||||||| |||||||||| || ||| |||| ||    
T  17499699 ttctgacctgaattcgccacggtgagcagaggctctcgcctctctagtgacctagaaaacagagtgccttgtta-gattttgcgacctttgttgcacgag 17499601  T
Q  199 ttgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    |||   |||||||||||||||| ||||| | ||| |||||||||||||    
T  17499600 ttgtcgagagttgaaccttgggatagcattaagacttaatgatgatgt 17499553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 20698108 - 20698342
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||          ||||||||||| ||| |     
T  20698108 ccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaatgaaacttgtgggat 20698197  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| || ||| |||| ||||    
T  20698198 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgtggcacgagtt 20698296  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    |   ||||||||||||| || ||| | | ||| |||||||||||||    
T  20698297 gtcgagagttgaacctttggatagaattaagacttaatgatgatgt 20698342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 23083022 - 23083267
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||||||| | |||||||||| ||||||||| | ||||||| ||||||||| ||||| |||||||||||||||||||||| | |     
T  23083022 ccttagatgcttttgagtgcctggatatgtctaatagtgattaggacaaaatgtaggatgagattggacctggaaagatttagaatgaaactttttggat 23083121  T
Q  101 tctga-cctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
    ||||| ||| ||||||||| | |||| ||||||||||||||||||| ||||||||||||| |||| ||||||||| |||||||| || ||| |||| |||    
T  23083122 tctgacccttaactcgccatggcgagtagaggctctcgcctcgcgaatgacccagaaacatagtgtcttgttagg-ttttgcgacctttgttgcacgagt 23083220  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    || | |||||||||||||| ||||| | | ||| ||| |||||||||    
T  23083221 tgttcagagttgaaccttgaggtagtattaagacttagtgatgatgt 23083267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 53070360 - 53070582
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |   ||| |||||| ||||||| | ||    
T  53070360 ccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggattaattaagaatg-aactttttggaa 53070458  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttg-ttaggattttgcgatctatgtcgcacaagt 199  Q
     ||||||||||||||||| | |||| |||||||||||||||||||||  ||||   |||||  |||||| ||||||||||||||||| |||||||| |||    
T  53070459 gctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagttgcccaattacaga-agccttgtttaggattttgcgatctttgtcgcacgagt 53070557  T
Q  200 tgctaagagttgaaccttggggtag 224  Q
     | | ||||||||||||||||||||    
T  53070558 cgttgagagttgaaccttggggtag 53070582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 12340212 - 12340068
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| |  ||    
T  12340212 ccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggagaa 12340113  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||| | |||||||||||| | |||||||||||||||||||||||||    
T  12340112 tct-aactgaactcgccatggcgagcagaggctctcgcctcgcgag 12340068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 3 - 146
Target Start/End: Original strand, 12852027 - 12852169
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaatc 102  Q
    ||||||||  |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||| ||||| |||||||||||||||||  ||||    
T  12852027 ttagatgcccttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaatctggaaagacttagaatgaaacttttgataatc 12852126  T
Q  103 tgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||| |||||||||||| | |||||||||||||| ||||||||||    
T  12852127 tga-ctgaactcgccatggcgagcagaggctcttgcctcgcgag 12852169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 9513370 - 9513228
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||| |||||||||||| |||||  |    
T  9513370 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctgaaaagattttagaatgaaatttttgtga 9513271  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcg 142  Q
    |    |||||||||| ||| | |||||||||||||||||||||    
T  9513270 actaaacctgaactcaccatggcgagcagaggctctcgcctcg 9513228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 9521345 - 9521203
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||| |||||||||||| |||||  |    
T  9521345 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctgaaaagattttagaatgaaatttttgtga 9521246  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcg 142  Q
    |    |||||||||| ||| | |||||||||||||||||||||    
T  9521245 actaaacctgaactcaccatggcgagcagaggctctcgcctcg 9521203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 146
Target Start/End: Complemental strand, 14666053 - 14665921
Alignment:
Q  13 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaatctgacctgaac 112  Q
    ||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| |  ||||||| ||||||    
T  14666053 ttgagtgcctgaacatggctaatattgattaggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggagaatctga-ctgaac 14665955  T
Q  113 tcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    |||| | | |||||||||||||||||||||||||    
T  14665954 tcgcaatggcgagcagaggctctcgcctcgcgag 14665921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 146
Target Start/End: Complemental strand, 14669208 - 14669076
Alignment:
Q  13 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaatctgacctgaac 112  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| |  ||||||| ||||||    
T  14669208 ttgagtgcctgaacatgtctaatattgaataggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggagaatctga-ctgaac 14669110  T
Q  113 tcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    |||||| | ||||||||||||||| |||||||||    
T  14669109 tcgccatggcgagcagaggctctcacctcgcgag 14669076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 146
Target Start/End: Complemental strand, 14735566 - 14735434
Alignment:
Q  13 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaatctgacctgaac 112  Q
    ||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| |  ||||||| ||||||    
T  14735566 ttgagtgcctgaacatggctaatattgattaggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggagaatctga-ctgaac 14735468  T
Q  113 tcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    |||| | | |||||||||||||||||||||||||    
T  14735467 tcgcaatggcgagcagaggctctcgcctcgcgag 14735434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 30030288 - 30030054
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaact-tttggaa 99  Q
    |||||||||| |||||||| ||||||||||||||||||||||| |||||||||| | |||||||||||||||          |||||||||  |||||||    
T  30030288 ccttagatgcctttgagtgtctgaacatgtctaataatgattacgaaagaatgtgggatgagattgaacctg----------gaatgaaacagtttggaa 30030199  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtga-cccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaag 198  Q
     |||||||| ||||||||| | |||||||||||||||||||||||||| | ||||| |||||| |||||||||| |||||||||| || ||| |||| ||    
T  30030198 ttctgacct-aactcgccatggcgagcagaggctctcgcctcgcgagtaatcccag-aacagaatgccttgtta-gattttgcgacctttgttgcacgag 30030102  T
Q  199 ttgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    |||   ||||||||||||| |||||||  | ||| |||||||||||||    
T  30030101 ttgtcgagagttgaacctttgggtagctttaagacttaatgatgatgt 30030054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 13209989 - 13210133
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatg-aaacttttggaa 99  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||| ||||| |||||||| ||||| |||  |    
T  13209989 ccttagatgcttttgagtgcctaaacatgtctaata-tgattaggaaagaaagtagaatgagattgaacctggaaagacttagaatgaaaactcttgaga 13210087  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    || ||||| |||||||||| | |||| ||||||||||||||||||||    
T  13210088 atgtgacc-gaactcgccatggcgagtagaggctctcgcctcgcgag 13210133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 12933971 - 12934117
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||| ||||| |||||||||||| |||  |||    
T  12933971 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctggaaagattttagaatgaaattttgtgaa 12934070  T
Q  100 atctg-acctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
      ||| |||||||||||||| | ||||||||| ||||||||||||||||    
T  12934071 --ctgaacctgaactcgccatggcgagcagagactctcgcctcgcgagt 12934117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 14179782 - 14179693
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaa 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||    
T  14179782 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacttggaaagacttagaatgaaa 14179693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 32308128 - 32307983
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||   |||| |||||||||||  |||||| |    
T  32308128 ccttagatgcttttgagtgcctgaacatatctaataatgattaggaaagattggagaatgagattgaacctaggaagactttagaatgaa--ttttggga 32308031  T
Q  100 atctg-acctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
    | ||| |||||||||||||| | ||||||||||||||||||||||||||    
T  32308030 a-ctgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 32307983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 4588476 - 4588590
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| |  ||    
T  4588476 ccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctgtaaagacttagaatgaaactttggagaa 4588575  T
Q  101 tctgacctgaactcgc 116  Q
    ||||| ||||||||||    
T  4588576 tctga-ctgaactcgc 4588590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 63 - 224
Target Start/End: Complemental strand, 43841330 - 43841169
Alignment:
Q  63 attgaacctgaaaagatt-tagaatgaaacttttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacaga 161  Q
    |||||||||| ||||||| ||||||||||||| ||||| |||||||||||||||||||  |||||| |||| ||||||||||||||||||||||||||||    
T  43841330 attgaacctggaaagattgtagaatgaaacttgtggaattctgacctgaactcgccacagcgagcaaaggccctcgcctcgcgagtgacccagaaacaga 43841231  T
Q  162 gtgccttgttaggattttgcgatctatgtcgcacaagttgctaagagttgaaccttggggtag 224  Q
    ||| ||||||||| |||||||| || |||  ||| ||||| | ||||||  || |||||||||    
T  43841230 gtgtcttgttagg-ttttgcgacctttgttacacgagttgttgagagtttgactttggggtag 43841169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 16097790 - 16097645
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||| ||| ||||||||| |||||||||||||||||| ||||||||||| || |||||||||||||||||||||||| ||||||||| || |||||  |    
T  16097790 ccttaaatgtttttgagtgtctgaacatgtctaataattattaggaaagattggagaatgagattgaacctgaaaagattttagaatg-aatttttgtga 16097692  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||  ||||||||||||||| |  ||| ||||||||||||||||||||    
T  16097691 attggacctgaactcgccatggtgagtagaggctctcgcctcgcgag 16097645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 1644344 - 1644489
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    |||| |||| |||||||||||||||||||||| ||||||||||||||||| |  ||||||||||||||||||| |||| |||||||||||  |||||  |    
T  1644344 ccttggatgtttttgagtgcctgaacatgtctgataatgattaggaaagattagagaatgagattgaacctgagaagactttagaatgaa--ttttgtga 1644441  T
Q  100 atctg-acctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
    | ||| |||||||||||||| | ||||||||||||||||||||||||||    
T  1644442 a-ctgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 1644489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 49389305 - 49389446
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| | ||| |||||||||||  |||||  |    
T  49389305 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggagagactttagaatgaa--ttttgtga 49389402  T
Q  100 atctg-acctgaactcgccacgacgagcagaggctctcgcctcgc 143  Q
    | ||| |||||||||||||| | |||||||||| |||||||||||    
T  49389403 a-ctgaacctgaactcgccatggcgagcagaggttctcgcctcgc 49389446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 49667745 - 49667890
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||||| |  |||||||||||||||||| ||||| ||||||||||||  ||  |||    
T  49667745 ccttagatg-ttttgagcgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctggaaagattttagaatgaaatattgtgaa 49667843  T
Q  100 atctg-acctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
      ||| |||||||||||||| | ||||||||||||||||||||||||||    
T  49667844 --ctgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 49667890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 12399655 - 12399506
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||| | |||||||||          ||||||||||| ||        
T  12399655 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaaaatataggatgggtttgaacctg----------gaatgaaacttgtgaggt 12399566  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacag 160  Q
    |||||||||||||||||||| |||| | ||||||||||||| ||||||||||||||||||    
T  12399565 tctgacctgaactcgccacggcgagtaaaggctctcgcctcacgagtgacccagaaacag 12399506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 42386871 - 42386648
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||| || || ||||||| ||||||||  |||||||||||||| |||| | |||| || ||||||||||||||   || |||||||||||||||| |     
T  42386871 ccttagttgtttatgagtgcatgaacatgcataataatgattaggcaagactttagactgtgattgaacctgaaatagttaagaatgaaacttttgggag 42386772  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttg-ttaggattttgcgatctatgtcgcacaagt 199  Q
    |   |||||||||||||| | |||| |||||||||| ||||||||||  ||||   |||||  |||||| |||||||||||||| || |||||||| |||    
T  42386771 ttatacctgaactcgccatggcgagtagaggctctcacctcgcgagttgcccaattacaga-agccttgtttaggattttgcgaactttgtcgcacgagt 42386673  T
Q  200 tgctaagagttgaaccttggggtag 224  Q
    || |  |||||||||||||||||||    
T  42386672 tgttgtgagttgaaccttggggtag 42386648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 43842638 - 43842572
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattga 67  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  43842638 ccttagatgcttttgagtgcctgagcatgtctaataatgattaggaaagaatgtaggatgagattga 43842572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 147
Target Start/End: Complemental strand, 324693 - 324549
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac-ctgaaaagatttagaatgaaacttttggaaat 101  Q
    ||||||| ||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||   ||| || || |||||| || |||||| | |    
T  324693 ttagatgattttgagtgcctgaatatgtataataatgattaggaaagattgtagaatgagattgaactgagaatagtttaagaatg-aatttttgggagt 324595  T
Q  102 ctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
       ||||||||||||||   |||| |||||||||||||||||||||    
T  324594 tgcacctgaactcgccatagcgagtagaggctctcgcctcgcgagt 324549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 2050862 - 2051073
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||| |||||||||||| ||||||| ||||||||||||||||||| | |||| |||||||||||| ||| || || ||||||  | |||||| |     
T  2050862 ccttagatgtttttgagtgcctcaacatgtgtaataatgattaggaaagattctagattgagattgaacc-gaatagtttaagaatg-gatttttgggag 2050959  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |   |||||||||| |||   |||| |||||||||||||||| ||||  |||||  ||| | ||| |  ||||||||||||||||| |||||||  ||||    
T  2050960 ttacacctgaactctccatagcgagtagaggctctcgcctcgtgagttgcccagttacaaaatgcttgtttaggattttgcgatctttgtcgcatgagtt 2051059  T
Q  201 gctaagagttgaac 214  Q
    | | ||||||||||    
T  2051060 gttgagagttgaac 2051073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 16104240 - 16104169
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||    
T  16104240 ccttagatgtttctgagtgcctgaacatgtctaataatgattaggaaagattggagaatgaggttgaacctg 16104169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 17247181 - 17247239
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaat 59  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  17247181 ccttagatgtttttgagtgccggaacatgtctaataatgattaggaaagaatgtagaat 17247239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 132 - 240
Target Start/End: Complemental strand, 16796875 - 16796768
Alignment:
Q  132 ctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttgctaagagttgaaccttggggtagcactgag 231  Q
    ||||||||||||||||||||| ||||||||||||||||| | || ||||||| || ||| |||| | ||| ||||||||||||||| |||||||| | ||    
T  16796875 ctctcgcctcgcgagtgacccggaaacagagtgccttgtga-gactttgcgacctttgttgcacgaattgttaagagttgaacctttgggtagcattaag 16796777  T
Q  232 aattaatga 240  Q
    | |||||||    
T  16796776 acttaatga 16796768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 14234950 - 14234809
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||  |||||||||||||||||||| |||| |||||||||||||| | |||| |||||||||||| ||||   || |||||| || |||||| |     
T  14234950 ccttagatttttttgagtgcctgaacatgtataatgatgattaggaaagattatagattgagattgaacccgaaatagttaagaatg-aatttttgggag 14234852  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgc 143  Q
    |   |||||||||||||| | |||| |||||| ||||||||||    
T  14234851 ttgcacctgaactcgccatggcgagtagaggccctcgcctcgc 14234809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 3 - 224
Target Start/End: Original strand, 52523390 - 52523611
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct-gaaaagatttagaatgaaacttttggaaat 101  Q
    ||||||| |||||||||||||||||||| ||||||| ||||||||||| | |||  ||| ||||||||| ||| || || ||||||  | |||||| | |    
T  52523390 ttagatgattttgagtgcctgaacatgtgtaataattattaggaaagattctagtttgatattgaacctggaacagtttaagaatg-gatttttgggagt 52523488  T
Q  102 ctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttg 201  Q
       ||||||||||||||   |||| |||||| |||||||  |||||  |||||  ||||| ||| |  ||||||||||||||||| |||||||| |||      
T  52523489 tacacctgaactcgccatagcgagtagaggccctcgcctgacgagttgcccagttacagaatgcttgtttaggattttgcgatctttgtcgcacgagtca 52523588  T
Q  202 ctaagagttgaaccttggggtag 224  Q
     | |||||||||| |||||||||    
T  52523589 ttgagagttgaactttggggtag 52523611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 12171778 - 12171827
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaga 50  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  12171778 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaaga 12171827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 16809845 - 16809724
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||| |||||||||||||| |||||||    |||||||||||||||||||||||| |||||||||| ||||          ||||||||||| ||| |     
T  16809845 ccttaaatgcttttgagtgcttgaacat----aataatgattaggaaagaatgtaggatgagattgatcctg----------gaatgaaacttgtgggat 16809760  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctc 136  Q
    |||||||||||||||||| | |||||||| ||||||    
T  16809759 tctgacctgaactcgccatggcgagcagatgctctc 16809724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 1465070 - 1465141
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| |||||||||||||||| ||| | || ||||||| |||||| |||||| ||||||||||||||    
T  1465070 ccttagatgtttttgagtgcctgaacttgtatgatgatgattatgaaagattgtagattgagattgaacctg 1465141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 15471384 - 15471313
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| |||||||| ||||||||||| |||| |||||||||||||| || ||| | ||||||||||||    
T  15471384 ccttagatgtttttgagtccctgaacatgtataatgatgattaggaaagattggagattaagattgaacctg 15471313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 22109938 - 22110007
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| |||||||||||||||||||| |||||||||||||| |||  | |||  ||||||||||||||    
T  22109938 ttagatgtttttgagtgcctgaacatgtataataatgattaggcaagtttttagtttgagattgaacctg 22110007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 23275201 - 23275133
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||||| ||||||||||||||| |||| |||||||||||||| |||  | |||| |||||||||||    
T  23275201 ccttagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaac 23275133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 14501659 - 14501588
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| ||||||||||||||| |||| |||||||||||||| |||  | |||| |||||||| |||||    
T  14501659 ccttagatgattttgagtgcctgaatatgtataataatgattaggcaaggttttagattgagattggacctg 14501588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 43927638 - 43927597
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattag 44  Q
    ||||||| |||||||||||||||||||| |||||||||||||    
T  43927638 ttagatgattttgagtgcctgaacatgtataataatgattag 43927597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 45797701 - 45797632
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| ||||||||||||||| |||| |||||||||||||| |||  | |||| |||||||| |||||    
T  45797701 ttagatgattttgagtgcctgaatatgtataataatgattaggtaagtttttagattgagattggacctg 45797632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 605952 - 606023
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| |||||||||||||||  ||| |||||||||||||| ||   | |||| ||||||||||||||    
T  605952 ccttagatgattttgagtgcctgaatgtgtataataatgattaggcaattttctagattgagattgaacctg 606023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 839668 - 839609
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  839668 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 839609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 12378456 - 12378385
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| ||||||||||||||| ||||  ||||||||||||| | |  | |||| ||||||||||||||    
T  12378456 ccttagatgattttgagtgcctgaatatgtacaataatgattaggcatgtttttagattgagattgaacctg 12378385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 23412834 - 23412905
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| ||||||||||||||| |||| ||| |||||||||| |||  | |||| |||||||| |||||    
T  23412834 ccttagatgattttgagtgcctgaatatgtataaaaatgattaggcaagtttttagattgagattggacctg 23412905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 24188199 - 24188140
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  24188199 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 24188140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 55149400 - 55149341
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  55149400 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 55149341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 316654 - 316612
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 45  Q
    ||||||| ||||||||||||||| |||| ||||||||||||||    
T  316654 ttagatgtttttgagtgcctgaatatgtataataatgattagg 316612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 9578136 - 9578070
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    |||||||  ||||||||||||||||||| | |||||||||||| |||| | |||| ||| |||||||    
T  9578136 ttagatgactttgagtgcctgaacatgtatgataatgattaggcaagattttagattgaaattgaac 9578070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 21837958 - 21837892
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||| ||||||||| ||||| |||| |||||||||||||| |||  | |||| |||||||||||    
T  21837958 ttagatgattttgagtgtctgaatatgtataataatgattaggcaagtttttagattgagattgaac 21837892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 15691950 - 15692019
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  15691950 ccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 15692019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 23318333 - 23318390
Alignment:
Q  11 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaa 68  Q
    |||||||||||||||||||| ||| |||||||||| || ||| |||| ||| ||||||    
T  23318333 ttttgagtgcctgaacatgtttaagaatgattaggcaaaaatttagattgaaattgaa 23318390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 23704441 - 23704510
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  23704441 ccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 23704510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 23722897 - 23722966
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  23722897 ccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 23722966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 23741353 - 23741422
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  23741353 ccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 23741422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 37250775 - 37250844
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| || |||||  |||||||||| |||||||||||||| |||  | |||| ||||||||||||||    
T  37250775 ttagatgattctgagtatctgaacatgtataataatgattaggcaagtttttagattgagattgaacctg 37250844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 41201470 - 41201539
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  41201470 ccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 41201539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 4291194 - 4291150
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtag 56  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||    
T  4291194 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 4291150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 17710275 - 17710319
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtag 56  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||    
T  17710275 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 17710319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 41092030 - 41092074
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtag 56  Q
    |||||||||||||||||| ||| || |||||||||| ||||||||    
T  41092030 tttgagtgcctgaacatgcctagtattgattaggaatgaatgtag 41092074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 185; Significance: 1e-100; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 2 - 246
Target Start/End: Original strand, 50209875 - 50210119
Alignment:
Q  2 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaat 101  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |    
T  50209875 cttatatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagatttagaatgaaacttttggaatt 50209974  T
Q  102 ctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttg 201  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||| |||||    
T  50209975 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagttg 50210074  T
Q  202 ctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
     | ||||||||||||| |||||| | ||||| |||||||||||||    
T  50210075 ttgagagttgaacctttgggtagtattgagacttaatgatgatgt 50210119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 2 - 246
Target Start/End: Complemental strand, 34510239 - 34509995
Alignment:
Q  2 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||| ||||||||||    
T  34510239 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaa-cttttggaaa 34510141  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| | ||||||| |||||||| || ||| |||| ||||    
T  34510140 tctgacctgaactcgccacggcgagcagaggctctcgcctcacgagtgacccagaaacagagtgtcatgttaggtttttgcgacctttgttgcacgagtt 34510041  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | || ||||||||||||||||| | ||||| |||||||||||||    
T  34510040 gttgagggttgaaccttggggtagtattgagacttaatgatgatgt 34509995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 22532729 - 22532484
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||| ||||||||| |||||||||    
T  22532729 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaggattgtagaatgaa-cttttggaa 22532631  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
    ||||||| |||||||||||||  ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| || ||| |||| ||     
T  22532630 atctgacttgaactcgccacggtgagcagaggctctcgcctcgcgagtgacccaaaaacagagtgacttgttaggattttgcgacctttgttgcacgagc 22532531  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    || | |||||||||||||| ||||| | ||||| |||||||||||||    
T  22532530 tgttgagagttgaaccttgaggtagtattgagacttaatgatgatgt 22532484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 433467 - 433243
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||| |    
T  433467 ccttagatgcttttgagtgtctgaacatgtctattaatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaac-tttggga 433369  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||||||   || | ||| |  ||||||||||||||||| |||||||| |||    
T  433368 atctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccagttgcaaaatgcttgtttaggattttgcgatctttgtcgcacgagt 433269  T
Q  200 tgctaagagttgaaccttggggtagc 225  Q
     | | |||||||||||||||||||||    
T  433268 cgttgagagttgaaccttggggtagc 433243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 20135647 - 20135424
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaac-ttttggaa 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||| |||||||||||| ||||||||    
T  20135647 ccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaaagacttagaatgaaacattttggaa 20135548  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     ||||||| |||||||||| | |||||||| |||||| |||||||||| |||||||||||||||| ||||||||| || ||||| || ||| | || |||    
T  20135547 ttctgacc-gaactcgccatggcgagcagaagctctcacctcgcgagtaacccagaaacagagtgacttgttaggtttatgcgacctttgttgtacgagt 20135449  T
Q  200 tgctaagagttgaaccttggggtag 224  Q
    || | ||||||||||||| ||||||    
T  20135448 tgttgagagttgaaccttagggtag 20135424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 22354233 - 22354478
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    ||||| |||||||||||||| ||||||||||| ||||||||||||||| || |||| ||||||||||||||| | ||||| ||||||||||||| ||| |    
T  22354233 ccttatatgcttttgagtgcttgaacatgtcttataatgattaggaaataacgtaggatgagattgaacctggatagattgtagaatgaaacttgtggga 22354332  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     |||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||| || ||| |||| |||    
T  22354333 ttctgacctgaactcgccacggcgagtagaggctctcgcctcgcaagtgacccagaaacagagtgacttgttagg-ttttgcgacctttgttgcacgagt 22354431  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    || | ||| |||||||||  ||||| | | ||| ||||||| |||||    
T  22354432 tgttgagaattgaacctttaggtagtattaagacttaatgaggatgt 22354478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 27250401 - 27250629
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||          ||||||||| | ||| |     
T  27250401 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgggattgaacctg----------gaatgaaacctgtgggat 27250490  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||  ||||||||| || ||| |||| ||||    
T  27250491 tctgacctgaactcgccacgtcgagcagaggctctcgcctcgcgagtgacacagaaacagagtcccttgtta-tattttgcgacctttgttgcacgagtt 27250589  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatga 240  Q
    |   ||||||||||||| |||||||| ||| | |||||||    
T  27250590 gtcgagagttgaacctttgggtagcattgatacttaatga 27250629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 22355846 - 22356080
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||          |||||||| || ||| |     
T  22355846 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaatgaaatttgtgggat 22355935  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtg-ccttgttaggattttgcgatctatgtcgcacaagt 199  Q
    |||||||||||||||||||| |||||||||||| |||| |||||||||||| |||||||||||| | |||||| ||||||| || || ||| |||| |||    
T  22355936 tctgacctgaactcgccacggcgagcagaggct-tcgcatcgcgagtgacctagaaacagagtgacattgtta-gattttgagacctttgttgcacgagt 22356033  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    ||   |||||||||||||||| ||||| | ||| |||||||||||||    
T  22356034 tgtcgagagttgaaccttgggatagcattaagacttaatgatgatgt 22356080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 22357532 - 22357766
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||          |||||||| || ||| |     
T  22357532 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaatgaaatttgtgggat 22357621  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtg-ccttgttaggattttgcgatctatgtcgcacaagt 199  Q
    |||||||||||||||||||| |||||||||||| |||| |||||||||||| |||||||||||| | |||||| ||||||| || || ||| |||| |||    
T  22357622 tctgacctgaactcgccacggcgagcagaggct-tcgcatcgcgagtgacctagaaacagagtgacattgtta-gattttgagacctttgttgcacgagt 22357719  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    ||   |||||||||||||||| ||||| | ||| |||||||||||||    
T  22357720 tgtcgagagttgaaccttgggatagcattaagacttaatgatgatgt 22357766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 20846891 - 20847119
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||          ||||||||||| ||        
T  20846891 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggtaagaatgtaggatgagattgaacctg----------gaatgaaacttgtgaggt 20846980  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    | |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||| || ||| |||| ||||    
T  20846981 tttgacctgaactcgccacggcgagcagaggctcttgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgcacgagtt 20847079  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatga 240  Q
    | | ||  || |||||| |||||||| | ||| |||||||    
T  20847080 gttgaggattaaacctttgggtagcattaagacttaatga 20847119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 20919061 - 20918917
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  || ||| |  ||    
T  20919061 ccttacatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatttaaatttggagaa 20918962  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||| |||||||||||| | |||||||||||||||||||||||||    
T  20918961 tctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 20918917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 21027129 - 21026901
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||          ||||||||||| ||        
T  21027129 ccttagatgcttttgagtgcttgaacatgtctaataatgattaggtaagaatgtaggatgagattgaacctg----------gaatgaaacttgtgaggt 21027040  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||| || ||| |||| ||||    
T  21027039 tctgacctaaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacaaagtgacttgtta-gattttgcgacctttgttgcacgagtt 21026941  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatga 240  Q
    | | ||  || |||||| |||||||| | ||| |||||||    
T  21026940 gttgaggattaaacctttgggtagcattaagacttaatga 21026901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 3 - 183
Target Start/End: Original strand, 38801065 - 38801234
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaatc 102  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||          ||||  ||||| ||| | ||    
T  38801065 ttagatgtctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgtgattgaacctg----------gaattgaacttgtgggattc 38801154  T
Q  103 tgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcga 183  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||    
T  38801155 tgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacctagaaacagagtgacttgtta-gattttgcga 38801234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 33681469 - 33681301
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||| |||||||| |||||| |||||||||||||||||||||||| || |||||||||||||||||| ||||| ||||||||| || |||||  |    
T  33681469 ccttagatgtttttgagttcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatg-aatttttgtga 33681371  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttg 169  Q
     |   |||||||||||||| | |||||||||||||||||||||||| | ||||||  |||||||||||||    
T  33681370 gttgcacctgaactcgccatggcgagcagaggctctcgcctcgcgaattacccagttacagagtgccttg 33681301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 21754495 - 21754350
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||  |||| |||||||||||  |||||  |    
T  21754495 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaaagagattgaacctgggaagactttagaatgaa--ttttgtga 21754398  T
Q  100 atctg-acctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
    | ||| |||||||||||||| | ||||||||||||||||||||||||||    
T  21754397 a-ctgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 21754350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 20091135 - 20091281
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaac-ttttggaa 99  Q
    |||||||||| ||||| ||||||||||||||||||| |||||||||  |||||||  ||||||||| ||||||||||| ||||||||||||   |||| |    
T  20091135 ccttagatgcctttgattgcctgaacatgtctaatattgattaggagtgaatgtaagatgagattggacctgaaaagacttagaatgaaacaacttggga 20091234  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
     |||||||||||||||||| | |||||||| | |||| |||||||||    
T  20091235 ttctgacctgaactcgccatggcgagcagatgttctcacctcgcgag 20091281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 52927642 - 52927815
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||| ||||| ||| ||||| || ||||  ||    
T  52927642 ccttagatgtttttgagtgcctgaacatgtctaataatgattatgaaagattggagaatgagattgaacctggaaagattttggaatg-aattttttaaa 52927740  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttagg 174  Q
     |  ||||||||||||||| | |||| |||||| |||||||||||| |   ||||  ||||| ||||||||||||    
T  52927741 gttagacctgaactcgccatggcgagtagaggccctcgcctcgcgaattgaccagttacagaatgccttgttagg 52927815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 4 - 146
Target Start/End: Complemental strand, 20248734 - 20248592
Alignment:
Q  4 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaaatc 102  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||| | ||| |||||||||||  |||| |  | |    
T  20248734 tagatgtttttgagtgcctgaacatgtctaataatgattaggaaagatcggagaatgagattgaacctggagagactttagaatgaa--tttttgtgaac 20248637  T
Q  103 tg-acctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    || |||||||||||||| | |||| ||||||| ||||||||||||    
T  20248636 tgaacctgaactcgccatggcgagtagaggctatcgcctcgcgag 20248592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 22921528 - 22921597
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||    
T  22921528 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaacc 22921597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 22238089 - 22238009
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattt 81  Q
    ||||||||  ||||||||||||||||||||||||||||| |||||||||| || ||||||||||| |||||| ||||||||    
T  22238089 ccttagatatttttgagtgcctgaacatgtctaataatggttaggaaagattggagaatgagattaaacctggaaagattt 22238009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 21162188 - 21162117
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||| ||||||||||||||||||| | ||||||||| |||| |||||||||||||||||||||||||||||    
T  21162188 ccttaaatgcttttgagtgcctgaataagtctaataacgattgggaaagaatgtagaatgagattgaacctg 21162117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 21301199 - 21301245
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaa 47  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  21301199 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaa 21301245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 28194109 - 28194254
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaa-agatttagaatgaaacttttggaa 99  Q
    |||| |||| |||||||||||||||| ||| | || |||||||||||||| |||||| ||||||||||||||||| || || |||||||| | ||||  |    
T  28194109 ccttggatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacctgaaatagtttaagaatgaatc-tttgtga 28194207  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
     |   |||||||||||||| | | || ||||||||||||||||||||    
T  28194208 gttgcacctgaactcgccatggcaagtagaggctctcgcctcgcgag 28194254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 224
Target Start/End: Complemental strand, 26065295 - 26065176
Alignment:
Q  106 cctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttg-ttaggattttgcgatctatgtcgcacaagttgcta 204  Q
    |||||||||||||   |||| |||||||||||||||||||||  |||||  ||||| | ||||| ||||| ||||||||||| |||||||| || || ||    
T  26065295 cctgaactcgccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaataccttgtttagggttttgcgatctttgtcgcacgagatgtta 26065196  T
Q  205 agagttgaaccttggggtag 224  Q
     ||||| | |||||||||||    
T  26065195 tgagtttatccttggggtag 26065176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 43697820 - 43697749
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| ||||||||||||||||||||||| | |||||||| ||||| | |||| ||||||| ||||||    
T  43697820 ccttagatgtttttgagtgcctgaacatgtctatttatgattagaaaagattctagattgagatttaacctg 43697749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 35260718 - 35260788
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctga 73  Q
    ||||||| || ||||||||||||||||| |||||||||||||| |||  | |||| |||||||||||||||    
T  35260718 ttagatgattctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctga 35260788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 35981352 - 35981418
Alignment:
Q  6 gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    |||| |||||||||||||||| ||| | || |||||||||||||| |||||| ||||||||||||||    
T  35981352 gatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacctg 35981418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 21895895 - 21895964
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| || |||||||||||||| || ||||||||||||||||||  | |||| ||||||||||||||    
T  21895895 ttagatgattatgagtgcctgaacaagtataataatgattaggaaagtttttagattgagattgaacctg 21895964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 170 - 222
Target Start/End: Complemental strand, 16758942 - 16758890
Alignment:
Q  170 ttaggattttgcgatctatgtcgcacaagttgctaagagttgaaccttggggt 222  Q
    ||||||||||||||||| |||||||| ||||| | ||||||||||||||||||    
T  16758942 ttaggattttgcgatctttgtcgcacgagttgttgagagttgaaccttggggt 16758890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 16759186 - 16759114
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctga 73  Q
    ||||||||| |||||||||||| |||| || |||||||||||||| |||  | |||| |||||||||||||||    
T  16759186 ccttagatgtttttgagtgcctaaacacgtataataatgattaggcaagtttttagattgagattgaacctga 16759114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 224
Target Start/End: Original strand, 35260861 - 35260964
Alignment:
Q  122 cgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttg-ttaggattttgcgatctatgtcgcacaagttgctaagagttgaaccttggg 220  Q
    |||| |||||| ||||||||||||||  |||||  ||| | | ||||| ||||||||||||||||| |||||||| || || || ||||||||| |||||    
T  35260861 cgagtagaggccctcgcctcgcgagtttcccagttacaaaataccttgcttaggattttgcgatctttgtcgcacgagatgttatgagttgaacattggg 35260960  T
Q  221 gtag 224  Q
    ||||    
T  35260961 gtag 35260964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 41049629 - 41049700
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| || ||||||||||||||||| |||||||| ||||| |||  | |||| ||||||||||||||    
T  41049629 ccttagatgtttctgagtgcctgaacatgtataataatggttaggcaagtttttagattgagattgaacctg 41049700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 16381698 - 16381632
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||| ||||||||||||| |||||| ||| ||||||||||||||  | |||||||| |||||||    
T  16381698 ttagatggttttgagtgcctggacatgtataagaatgattaggaaagtttttagaatgaaattgaac 16381632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 26065441 - 26065383
Alignment:
Q  14 tgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||||||||||| |||||||||||||| |||  | |||| ||||||||||||||    
T  26065441 tgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctg 26065383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 16367873 - 16367942
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| ||||||||||||||| |||| |||||||||||||| |||  | |||| ||||| ||||||||    
T  16367873 ttagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagaatgaacctg 16367942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 170
Target Start/End: Complemental strand, 21162121 - 21162056
Alignment:
Q  105 acctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgt 170  Q
    ||||| |||||||| | |||||||||||||||||||||||||  |||| ||| |||| ||||||||    
T  21162121 acctgtactcgccatggcgagcagaggctctcgcctcgcgagcaaccctgaaccagaatgccttgt 21162056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 21861157 - 21861226
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| || |||||||||||||| || |||||||||||||| |||  | |||| ||||||||||||||    
T  21861157 ttagatgattctgagtgcctgaacaagtataataatgattaggcaagtttttagattgagattgaacctg 21861226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 20524899 - 20524958
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  20524899 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 20524958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 21342608 - 21342537
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| ||||||||| ||||| |||| |||||||||||||| |||  | |||| ||||| ||||||||    
T  21342608 ccttagatgattttgagtgtctgaatatgtataataatgattaggcaagtttttagattgagaatgaacctg 21342537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 21347473 - 21347402
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| ||||||||| ||||| |||| |||||||||||||| |||  | |||| ||||| ||||||||    
T  21347473 ccttagatgattttgagtgtctgaatatgtataataatgattaggcaagtttttagattgagaatgaacctg 21347402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 21438216 - 21438157
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  21438216 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 21438157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 23763633 - 23763574
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  23763633 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 23763574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 19063942 - 19063884
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  ||||||||||    
T  19063942 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacc 19063884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 19111832 - 19111774
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  ||||||||||    
T  19111832 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacc 19111774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 27652808 - 27652874
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||| ||||||||||||||| |||  |||||||||||||| |||  | |||| |||||||||||    
T  27652808 ttagatgtttttgagtgcctgaatatgcataataatgattaggcaagtttttagattgagattgaac 27652874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 48521102 - 48521036
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||| |||||||| |||||| |||| |||||||||||||| |||  | |||| |||||||||||    
T  48521102 ttagatgtttttgagtacctgaatatgtataataatgattaggcaagtttttagattgagattgaac 48521036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 52940464 - 52940506
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 45  Q
    ||||||| |||||||||||||||||||| ||||||| ||||||    
T  52940464 ttagatgattttgagtgcctgaacatgtataataataattagg 52940506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 16093479 - 16093548
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| ||||||||||||| | |||| ||||||||||| || |||  | |||| ||||||||||||||    
T  16093479 ttagatggttttgagtgcctggatatgtataataatgatttggcaagtttttagattgagattgaacctg 16093548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 146
Target Start/End: Complemental strand, 20637206 - 20637165
Alignment:
Q  105 acctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    |||||||||||||| | |||| ||||||||||||||||||||    
T  20637206 acctgaactcgccatggcgagtagaggctctcgcctcgcgag 20637165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 50687118 - 50687057
Alignment:
Q  11 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||||||| | |||| |||||||||||||| |||  | |||| ||||||||||||||    
T  50687118 ttttgagtgcctgtatatgtataataatgattaggcaagtttttagattgagattgaacctg 50687057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 222
Target Start/End: Complemental strand, 21342384 - 21342332
Alignment:
Q  170 ttaggattttgcgatctatgtcgcacaagttgctaagagttgaaccttggggt 222  Q
    ||||| ||||||||||  |||||||| ||||| | ||||||||||||||||||    
T  21342384 ttaggtttttgcgatcgttgtcgcacgagttgttgagagttgaaccttggggt 21342332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 222
Target Start/End: Complemental strand, 21347249 - 21347197
Alignment:
Q  170 ttaggattttgcgatctatgtcgcacaagttgctaagagttgaaccttggggt 222  Q
    ||||| ||||||||||  |||||||| ||||| | ||||||||||||||||||    
T  21347249 ttaggtttttgcgatcgttgtcgcacgagttgttgagagttgaaccttggggt 21347197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 45310123 - 45310175
Alignment:
Q  94 ttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||||| ||| |||| |||||||| | |||||||| ||||||||||||||||    
T  45310123 ttggaaacctggcctgtactcgccatggcgagcagatgctctcgcctcgcgag 45310175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 50613701 - 50613769
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    |||| |||| |||||||||| |||| |||| |||||||||||||| |||  | |||| |||||||||||    
T  50613701 ccttcgatgattttgagtgcatgaatatgtataataatgattaggcaagtttttagattgagattgaac 50613769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 50621529 - 50621597
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    |||| |||| |||||||||| |||| |||| |||||||||||||| |||  | |||| |||||||||||    
T  50621529 ccttcgatgattttgagtgcatgaatatgtataataatgattaggcaagtttttagattgagattgaac 50621597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 183; Significance: 5e-99; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 25726 - 25971
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||  ||||||||    
T  25726 ccttagatggttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgaaaagattgtagaatgaat-ttttggaa 25824  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||| |||    
T  25825 atctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagt 25924  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    ||||||||| ||||||||||||||| | ||||| |||||||||||||    
T  25925 tgctaagagctgaaccttggggtagtattgagacttaatgatgatgt 25971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 33155 - 33401
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattt-agaatgaaacttttggaa 99  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||    
T  33155 ccttagatgcttctgagtgcctggacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattttagaatgaaacttttggaa 33254  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     ||| |||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||  ||||||    
T  33255 gtcttacctgaactcgccacggcgagcaaaggctctcgcctcgcgtgtgacccagaaacagagtgccttgtcaggattttgcgatctgtgtcatacaagt 33354  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    || |||||||||||||||||||||| | ||||| |||||||||||||    
T  33355 tgttaagagttgaaccttggggtagtattgagacttaatgatgatgt 33401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 182; Significance: 2e-98; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 38227940 - 38227695
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |     
T  38227940 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagatttagaatgaaactttttggat 38227841  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| || ||| |||| ||||    
T  38227840 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccataaacagagtgccttgttaggtttttgcgacctttgttgcacgagtt 38227741  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | |||||||||||||||||||||| | | ||| |||||||||||||    
T  38227740 gttaagagttgaaccttggggtagtattaagacttaatgatgatgt 38227695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 2 - 246
Target Start/End: Original strand, 3564026 - 3564270
Alignment:
Q  2 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||| ||||||||||    
T  3564026 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaa-cttttggaaa 3564124  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||||  |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||| ||||    
T  3564125 tctgacctgaactcgccacagcgagcaaatgctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagtt 3564224  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | |||||||| ||||||||||||| | ||||| |||||||||||||    
T  3564225 gttaagagtttaaccttggggtagtattgagacttaatgatgatgt 3564270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 15143698 - 15143943
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattt-agaatgaaacttttggaa 99  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||| |||||||| ||||||  |    
T  15143698 ccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagattttagaatgagattgaacctggaaagattttagaatgaa-cttttgtga 15143796  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     ||||||||| |||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||| |||| |||    
T  15143797 ttctgacctgtactcgccatggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgccttgttaggattttgcgacctttgttgcacgagt 15143896  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    ||||||||||||||||| ||||||| ||| ||| |||||||||||||    
T  15143897 tgctaagagttgaacctcggggtagtactaagacttaatgatgatgt 15143943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 9509649 - 9509404
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| ||| |    
T  9509649 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtggga 9509550  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||| |||  |||    
T  9509549 ttctgacctgaactcgccacggcgaggagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtta-gattttgcgacctttgttgcaagagt 9509451  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    ||   |||||||||||||||| ||||| | ||| ||||||| |||||    
T  9509450 tgtcgagagttgaaccttgggatagcattaagacttaatgaggatgt 9509404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 12699292 - 12699047
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||| | ||||||||||  ||| |    
T  12699292 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgaaattgaacctggaaagattgttgaatgaaactcgtggga 12699193  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     |||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||| |||| ||||||||| |||||||| || ||| |||| |||    
T  12699192 ttctgacctgaactcgccacggcgagcagaggctctcacctcgtgagtgacccagaaacaaagtgacttgttagg-ttttgcgacctttgttgcacgagt 12699094  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    ||   | |||||||||||||||||| | | ||| ||||||| |||||    
T  12699093 tgtcgatagttgaaccttggggtagtattaagagttaatgaggatgt 12699047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 44116964 - 44116742
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||| ||    
T  44116964 ccttatatgcctttgagtccctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacccggaaagatttagaatgaaac-tttgggaa 44116866  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||| |||  |||||  ||    ||||||||||||||||| | | |||| |||     
T  44116865 tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgactcagttacagaacgctagtttaggattttgcgatctttattgcacgagtc 44116766  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    | | || |||||||||||||||||    
T  44116765 gttgagggttgaaccttggggtag 44116742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 17061621 - 17061844
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||| |||||||| |||| ||||  |    
T  17061621 ccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggatagattttagaataaaac-tttgaga 17061719  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
    ||||||||||||||||| | | |||| ||||||||||||||||||||||||| |   ||||| ||| |  ||||||||||||||||| |||||||| |||    
T  17061720 atctgacctgaactcgcgatggcgagtagaggctctcgcctcgcgagtgacctatttacagaatgcttgtttaggattttgcgatctttgtcgcacgagt 17061819  T
Q  200 tgctaagagttgaaccttggggtag 224  Q
     | | ||||||||||| ||||||||    
T  17061820 cgttgagagttgaaccatggggtag 17061844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 16385919 - 16386147
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||          |||| |||||| ||| |     
T  16385919 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaattaaacttgtgggat 16386008  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||| || ||| |||  ||||    
T  16386009 tctaacctgaactcgccacggcgagcagtggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgcatgagtt 16386107  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatga 240  Q
    |   ||||||||||||| ||||| || | ||| |||||||    
T  16386108 gtccagagttgaacctttgggtaacattaagacttaatga 16386147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 28504962 - 28505106
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |  ||    
T  28504962 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaa 28505061  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||||| |||||||||| | |||||||||||||||||||||||||    
T  28505062 tctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 28505106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 40443837 - 40443649
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||    |||       |||| ||| |     
T  40443837 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttaggatgagattgaacctggaa----tta-------acttgtgggat 40443749  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||| || ||| |||| ||||    
T  40443748 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttatt-ggattttgcgacctttgttgcacgagtt 40443650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 12756378 - 12756600
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |    || |||||| ||||||| | ||    
T  12756378 ccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggattatttaagaatg-aactttttggaa 12756476  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttg-ttaggattttgcgatctatgtcgcacaagt 199  Q
     ||||||||||||| ||| | |||| |||||||||||||||||||||  ||||   ||| |  |||||| ||||||||||||||||| |||||||| |||    
T  12756477 gctgacctgaactcaccatggcgagtagaggctctcgcctcgcgagttgcccaattaca-aaagccttgtttaggattttgcgatctttgtcgcacgagt 12756575  T
Q  200 tgctaagagttgaaccttggggtag 224  Q
     | | ||||||||||||||||||||    
T  12756576 cgttgagagttgaaccttggggtag 12756600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 27847505 - 27847717
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||          |||| |||||| ||| |     
T  27847505 ccttagatgcttttgagtgcctgaacatgtctaattatgattaggaaagaatttaggatgagattgaacctg----------gaattaaacttatgggat 27847594  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    | |||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||| || ||| |||| ||||    
T  27847595 tttgacctgaactcgccacggcaagcagaggctctcgcctcgcgagtgacccaaaaacagagtgacttgtta-gattttgcgacctttgttgcacgagtt 27847693  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    |   ||||||||||| | ||||||    
T  27847694 gtcgagagttgaacccttgggtag 27847717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 15754548 - 15754689
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatg-aaacttttggaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| | |||||||| |||||||||  |    
T  15754548 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaagtagaatgagattgaacctggaaaaacttagaatgaaaacttttgaga 15754647  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcg 142  Q
    |||||||| ||||| |||||| |||||| ||||||||||||||    
T  15754648 atctgacc-gaacttgccacggcgagcataggctctcgcctcg 15754689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 18302638 - 18302494
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||  |||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| |  ||    
T  18302638 ccttagatgcccttgagtgcctgaacatgtctaatatttattaggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggataa 18302539  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||| |||||||||||| | |||||||||||||||||||||||||    
T  18302538 tctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 18302494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 39267307 - 39267447
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| |  ||    
T  39267307 ccttatatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggagaa 39267406  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcg 142  Q
    ||||| |||||||||||| | |||||||||||||||||||||    
T  39267407 tctga-ctgaactcgccatggcgagcagaggctctcgcctcg 39267447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 9751211 - 9751355
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||| ||||| ||||||||||||||| |  ||    
T  9751211 ccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgaggttgaacctggaaagacttagaatgaaactttggagaa 9751310  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    | ||| |||||||||||| |  ||||||||||||||||||||||||    
T  9751311 tttga-ctgaactcgccatggtgagcagaggctctcgcctcgcgag 9751355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 34201243 - 34201099
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||| ||||||||||||||||||||| | |||||||| ||||||||||||||||||| ||||| ||||||||||| ||| |  ||    
T  34201243 ccttagatgcttttgagtgtctgaacatgtctaataatgatcaagaaagaatttagaatgagattgaacctgtaaagacttagaatgaaaatttggagaa 34201144  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||| |||||||||||| | |||||||||||||| ||||||||||    
T  34201143 tctga-ctgaactcgccatggcgagcagaggctcttgcctcgcgag 34201099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 2831967 - 2832110
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||  ||||| |||||||| |||||| |  ||    
T  2831967 ccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctagaaagacttagaatg-aactttggagaa 2832065  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||| |||||||| ||| | |||||||||||||||||||||||||    
T  2832066 tctga-ctgaactcaccatggcgagcagaggctctcgcctcgcgag 2832110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 26212445 - 26212217
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| ||||||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||          ||||||||||| ||        
T  26212445 ccttagatgcctttgagtgcctgaacatgtctaatatttattaggtaagaatgtaggatgagattgaacctg----------gaatgaaacttgtgaggt 26212356  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccag-aaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||  |||||||  |||||||| || ||| |||| |||    
T  26212355 tctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaaacagagtgatttgttag--ttttgcgacctttgttgcacgagt 26212258  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatga 240  Q
    || | ||  || |||||| |||||||| | ||| |||||||    
T  26212257 tgttgaggattaaacctttgggtagcattaagacttaatga 26212217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 810790 - 810936
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaag-atttagaatgaaacttttggaa 99  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||| || ||||| |||||||||||| |||| ||||||||||||  |||  |||    
T  810790 ccttagatgtttttgagtgcctgaacatatctaataatgattaggaaagattggagaataagattgaacctggaaagaatttagaatgaatttttgtgaa 810889  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
     | | |||||||||||||| | |||| |||||||||||||||||||||    
T  810890 ctgt-acctgaactcgccatggcgagtagaggctctcgcctcgcgagt 810936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 3 - 224
Target Start/End: Original strand, 12255454 - 12255675
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct-gaaaagatttagaatgaaacttttggaaat 101  Q
    ||||||| |||||||||| ||||||||| ||||||||||||||||||| | |||| ||||||||||||| ||| || || |||||| || |||||| | |    
T  12255454 ttagatgattttgagtgcttgaacatgtataataatgattaggaaagattctagattgagattgaacctggaatagtttaagaatg-aatttttgggagt 12255552  T
Q  102 ctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttg 201  Q
       ||||||||||||||   |||| |||||||||||||||||||||  |||||  ||||| ||| |  ||||||||||||||||| |||| ||| |||||    
T  12255553 tacacctgaactcgccatagcgagtagaggctctcgcctcgcgagtttcccagttacagaatgcttgtttaggattttgcgatctttgtcacacgagttg 12255652  T
Q  202 ctaagagttgaaccttggggtag 224  Q
     | |||||||||  |||||||||    
T  12255653 ttgagagttgaattttggggtag 12255675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 146
Target Start/End: Complemental strand, 44014633 - 44014489
Alignment:
Q  2 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaaa 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||| ||||||||| || |||||  |     
T  44014633 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatg-aatttttgttag 44014535  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    |   |||||||||||||| |  ||| ||||||||||||||||||||    
T  44014534 ttgcacctgaactcgccatggtgagtagaggctctcgcctcgcgag 44014489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 112 - 243
Target Start/End: Complemental strand, 10589386 - 10589256
Alignment:
Q  112 ctcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttgctaagagttg 211  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| || | | |||| |||||   |||||||    
T  10589386 ctcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgaccttttttgcacgagttgtctagagttg 10589288  T
Q  212 aaccttggggtagcactgagaattaatgatga 243  Q
     ||||| |||||| | | ||| ||||||||||    
T  10589287 gacctttgggtaggattaagacttaatgatga 10589256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 22073376 - 22073203
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct-gaaaagatttagaatgaaacttttggaa 99  Q
    ||||||| | |||||||||||||||||||| ||||||||||||| ||||| | |||||||||||||||||| ||| || || ||||||  | |||||| |    
T  22073376 ccttagaggtttttgagtgcctgaacatgtgtaataatgattagaaaagattctagaatgagattgaacctagaatagtttaagaatg-gatttttggga 22073278  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttagg 174  Q
     |   |||||||||||||| | |||| |||||| |||||||||||||| ||||||  ||||| ||| ||||||||    
T  22073277 gttacacctgaactcgccatggcgagtagaggccctcgcctcgcgagttacccagttacagaatgctttgttagg 22073203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 2279781 - 2280000
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg-aaaagatttagaatgaaacttttggaaat 101  Q
    ||||||| |||||||||||||||||||  ||||||||||||||||||| | |||| |||||||||||||| || || || ||||||  | ||||||   |    
T  2279781 ttagatgattttgagtgcctgaacatgcataataatgattaggaaagattttagattgagattgaacctgtaatagtttaagaatg-gatttttgggtgt 2279879  T
Q  102 ctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttg 201  Q
       ||||||||||||||   |||| |||||| ||||||||||||||  || ||  | ||| ||| |  ||||||||||||||||| |||| ||| |||||    
T  2279880 tacacctgaactcgccatagcgagtagaggccctcgcctcgcgagttgcctagttatagaatgcttgtttaggattttgcgatctttgtcacacgagttg 2279979  T
Q  202 ctaagagttgaaccttggggt 222  Q
     | ||||||||||||||||||    
T  2279980 ttgagagttgaaccttggggt 2280000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 174
Target Start/End: Complemental strand, 16056778 - 16056615
Alignment:
Q  11 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaa-agatttagaatgaaacttttggaaatctgacctg 109  Q
    ||||| || ||||||||||| ||||||||| ||||||||| | |||| |||||||||||||| || || || |||||| |  |||||| |||   |||||    
T  16056778 ttttgtgtacctgaacatgtataataatgaataggaaagattttagattgagattgaacctggaatagtttaagaatggat-ttttgggaattacacctg 16056680  T
Q  110 aactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttagg 174  Q
    |||||||||   |||| ||||||||||||||||||||| ||||||  ||||| ||||||||||||    
T  16056679 aactcgccatagcgagtagaggctctcgcctcgcgagttacccagttacagaatgccttgttagg 16056615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 47832268 - 47832201
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaa 68  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| || ||| | ||||||||    
T  47832268 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattaagattgaa 47832201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 68206 - 68036
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||| ||| ||| ||||||||||| |||||||||||||||||||||||| || ||| |||||||||||||| ||  |||||  |  |||||| ||| |     
T  68206 ccttaaatgttttcgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaataatttaagaacaaacttgtgggag 68107  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtt 171  Q
    |   |  ||||||||||| | |||| ||||||||||||||||||||  | ||||  ||||| |||||||||    
T  68106 ttacagatgaactcgccatggcgagtagaggctctcgcctcgcgagctaaccagttacagaatgccttgtt 68036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 16219377 - 16219578
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct-gaaaagatttagaatgaaacttttggaa 99  Q
    ||||||||| ||||||||| || ||| ||| ||||||||||||||||||| | |||| ||||||||||||| ||| || || |||||| || |||||| |    
T  16219377 ccttagatgtttttgagtgtctaaacttgtataataatgattaggaaagattttagattgagattgaacctggaatagtttaagaatg-aatttttggga 16219475  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggat-tttgcgatctatgtcgcacaag 198  Q
     |   || ||||||||||| | |||| |||||| ||||||||||||||   | ||  ||||| |||||||||||| |   |||||||| |||||||||||    
T  16219476 gttacacgtgaactcgccatggcgagtagaggccctcgcctcgcgagttgtctagttacagaatgccttgttaggttaaatgcgatctttgtcgcacaag 16219575  T
Q  199 ttg 201  Q
    |||    
T  16219576 ttg 16219578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 11995719 - 11995768
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaga 50  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11995719 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaaga 11995768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 16324456 - 16324395
Alignment:
Q  11 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    |||||||||| ||||||||||||||||||||||||||||| || ||  ||||||||||||||    
T  16324456 ttttgagtgcttgaacatgtctaataatgattaggaaagattggagtttgagattgaacctg 16324395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 18006101 - 18006052
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaga 50  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  18006101 ccttagatgtttttgagtgcctgaacatgtctaataatgattatgaaaga 18006052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 2529638 - 2529710
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctga 73  Q
    ||||||||| ||||||||||||||| |||| |||||||||||||| |||  | |||| |||||||| ||||||    
T  2529638 ccttagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattggacctga 2529710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 14045281 - 14045213
Alignment:
Q  4 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    |||||| ||||||||||||||| |||| |||||||||||||| |||  | |||| ||||||||||||||    
T  14045281 tagatgtttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctg 14045213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 14355311 - 14355243
Alignment:
Q  4 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    |||||| ||||||||||||||| |||| |||||||||||||| |||  | |||| ||||||||||||||    
T  14355311 tagatgtttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctg 14355243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 21064823 - 21064891
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||||| || |||| ||||||||||||  |||||||||||||||| | | ||||||||||||||||    
T  21064823 ccttagatgtttatgagggcctgaacatgtacaataatgattaggaaatattttagaatgagattgaac 21064891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 9389356 - 9389427
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    |||| |||| ||||||||| ||| || ||| |||| |||||||||||||| |||||| ||||||||||||||    
T  9389356 ccttggatgtttttgagtgtctggacttgtataatgatgattaggaaagattgtagattgagattgaacctg 9389427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 9177252 - 9177318
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||| |||||||||||||||||||| ||| |||||||||| |||  | |||| |||||||||||    
T  9177252 ttagatgtttttgagtgcctgaacatgtataagaatgattaggtaagtttttagattgagattgaac 9177318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 12901852 - 12901794
Alignment:
Q  14 tgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||||||||||| |||||||||||||| |||  | |||| ||||||||||||||    
T  12901852 tgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctg 12901794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 1867650 - 1867718
Alignment:
Q  4 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    |||||| |||| |||||||||| |||| |||||||||||||| |||  | |||| ||||||||||||||    
T  1867650 tagatgttttttagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctg 1867718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 146
Target Start/End: Original strand, 11995764 - 11995835
Alignment:
Q  74 aaagatttagaatgaaacttttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||| ||||||||||| ||| |  |||||||| ||||||||||| | | |||||||||||||||||||||||    
T  11995764 aaagacttagaatgaaaatttggagaatctgac-tgaactcgccatggcaagcagaggctctcgcctcgcgag 11995835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 14036731 - 14036664
Alignment:
Q  4 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||||| ||||||||||||||| ||||  ||||||||||||| |||  | |||| |||||||||||||    
T  14036731 tagatgtttttgagtgcctgaatatgtaaaataatgattaggcaagtttttagattgagattgaacct 14036664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 14346761 - 14346694
Alignment:
Q  4 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||||| ||||||||||||||| ||||  ||||||||||||| |||  | |||| |||||||||||||    
T  14346761 tagatgtttttgagtgcctgaatatgtaaaataatgattaggcaagtttttagattgagattgaacct 14346694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 14953619 - 14953560
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  14953619 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 14953560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 14959585 - 14959526
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  14959585 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 14959526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 26420399 - 26420340
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  26420399 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 26420340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 44408043 - 44408102
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  44408043 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 44408102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 11768526 - 11768568
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 45  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||    
T  11768526 ttagatgattttgagtgcctgaacatgtataagaatgattagg 11768568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 17017054 - 17017120
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||| ||||||||||||||| ||||  ||||||||||||| |||  | |||| |||||||||||    
T  17017054 ttagatgattttgagtgcctgaatatgtacaataatgattaggcaagtttttagattgagattgaac 17017120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 224
Target Start/End: Original strand, 17017297 - 17017351
Alignment:
Q  170 ttaggattttgcgatctatgtcgcacaagttgctaagagttgaaccttggggtag 224  Q
    ||||| ||||||||||| ||||||||||| || || ||||||| |||||||||||    
T  17017297 ttagggttttgcgatctttgtcgcacaagatgttatgagttgatccttggggtag 17017351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 11547953 - 11548010
Alignment:
Q  14 tgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  11547953 tgagtgcctgaacatacctagtaatgattaggaatgaatgtaggaaaagattgaacct 11548010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 11554549 - 11554606
Alignment:
Q  14 tgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  11554549 tgagtgcctgaacatacctagtaatgattaggaatgaatgtaggaaaagattgaacct 11554606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 15008107 - 15008148
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattag 44  Q
    ||||||| || ||||||||||||||||| |||||||||||||    
T  15008107 ttagatgattctgagtgcctgaacatgtataataatgattag 15008148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 20702664 - 20702733
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  20702664 ccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 20702733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 32768107 - 32768038
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  32768107 ccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 32768038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 11238655 - 11238699
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtag 56  Q
    |||||||||||||||||| ||| || |||||||||| ||||||||    
T  11238655 tttgagtgcctgaacatgcctagtattgattaggaatgaatgtag 11238699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 217
Target Start/End: Original strand, 15008279 - 15008375
Alignment:
Q  122 cgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttg-ttaggattttgcgatctatgtcgcacaagttgctaagagttgaacctt 217  Q
    |||| |||||||||||||||||||||  |||||    ||| | ||||| ||||| ||||||||||| |||||||| || || || ||||||||||||    
T  15008279 cgagtagaggctctcgcctcgcgagttgcccagttgtagaataccttgtttagggttttgcgatctttgtcgcacgagatgttatgagttgaacctt 15008375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 16260 - 16506
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattta-gaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||  ||||||||| |||||||    
T  16260 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttagaatgagattgaacctggaaagattttcgaatgaaacgtttggaa 16359  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
    |||| |||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||    
T  16360 atctaacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccaaaaacagagtgccttgttgggattttgcgatctgtgtcgcacaagt 16459  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    || || ||||||||||||||||||| | ||||| |||||||||||||    
T  16460 tgttaggagttgaaccttggggtagtattgagacttaatgatgatgt 16506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 178; Significance: 5e-96; HSPs: 3)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 16876 - 17121
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||     
T  16876 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagatttagaatgaaacttttggaat 16975  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| || ||| |||| ||||    
T  16976 tctgacctgaactcgccacggagagcagaggctctcgcctcgcgagtgacccagaaacagagtaccttattaggattttgcgacctttgttgcacgagtt 17075  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | |||||| ||||||||||||| | ||||| ||||| |||||||    
T  17076 gttgagagttaaaccttggggtagtattgagacttaatcatgatgt 17121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 79023 - 79094
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  79023 ccttagatgcttttgagtgcatgaacatgtttaataatgattaggaaggaatgtagaatgagattgaacctg 79094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 224
Target Start/End: Original strand, 79111 - 79213
Alignment:
Q  122 cgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtt-aggattttgcgatctatgtcgcacaagttgctaagagttgaaccttggg 220  Q
    |||| |||||||||||||||||||||  ||||   |||||  |||||||| ||||||||||||||| |||||||| |||   | ||||||||||||||||    
T  79111 cgagtagaggctctcgcctcgcgagttgcccaattacagaa-gccttgtttaggattttgcgatctttgtcgcacgagtcattgagagttgaaccttggg 79209  T
Q  221 gtag 224  Q
    ||||    
T  79210 gtag 79213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 169; Significance: 1e-90; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 4968 - 4722
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattt--agaatgaaacttttgga 98  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||  ||||||||||||| |||    
T  4968 ccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagatttttagaatgaaactttggga 4869  T
Q  99 aatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaag 198  Q
    | |||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||| || ||| |||||||||||||||||  |||||||||||    
T  4868 a-tctgacctgaactcgccatggcgagcagaggctctcgcttcgcgagtgacccagaaacagggtacctagttaggattttgcgatcagtgtcgcacaag 4770  T
Q  199 ttgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    ||| |||||||||||||||||||||| | ||||| |||||||||||||    
T  4769 ttgttaagagttgaaccttggggtagtattgagacttaatgatgatgt 4722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 12550 - 12304
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattt--agaatgaaacttttgga 98  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||  ||||||||||||| |||    
T  12550 ccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagatttttagaatgaaactttggga 12451  T
Q  99 aatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaag 198  Q
    | |||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||| || ||| |||||||||||||||||  |||||||||||    
T  12450 a-tctgacctgaactcgccatggcgagcagaggctctcgcttcgcgagtgacccagaaacagggtacctagttaggattttgcgatcagtgtcgcacaag 12352  T
Q  199 ttgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    ||| |||||||||||||||||||||| | ||||| |||||||||||||    
T  12351 ttgttaagagttgaaccttggggtagtattgagacttaatgatgatgt 12304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 22502 - 22256
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattt--agaatgaaacttttgga 98  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||  ||||||||||||| |||    
T  22502 ccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagatttttagaatgaaactttggga 22403  T
Q  99 aatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaag 198  Q
    | |||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||| || ||| |||||||||||||||||  |||||||||||    
T  22402 a-tctgacctgaactcgccatggcgagcagaggctctcgcttcgcgagtgacccagaaacagggtacctagttaggattttgcgatcagtgtcgcacaag 22304  T
Q  199 ttgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    ||| |||||||||||||||||||||| | ||||| |||||||||||||    
T  22303 ttgttaagagttgaaccttggggtagtattgagacttaatgatgatgt 22256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 166; Significance: 7e-89; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 39219 - 38975
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||      
T  39219 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattttgaatgaaacttgtggat- 39121  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||| || ||| |||| ||||    
T  39120 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacatagtgacttgttaggtttttgcgacctttgttgcacgagtt 39021  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | |||||||||||||||||||| | | ||| |||||||||||||    
T  39020 gttgagagttgaaccttggggtagtattaagacttaatgatgatgt 38975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 163; Significance: 5e-87; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 23660482 - 23660237
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |    
T  23660482 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgg-a 23660384  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| || || | | |||| |||    
T  23660383 atctgacctgaactcgccacggcgagcagaggctctcgcctcgtgagtgacccagaaacagagtgccttgttaggtttttgtgacctttattgcacgagt 23660284  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    |  | |||||||||||||||||||| | ||||| ||| |||||||||    
T  23660283 tattgagagttgaaccttggggtagtattgagacttattgatgatgt 23660237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 23076900 - 23076657
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||| |||||||||||||||||| |||||||     
T  23076900 ccttagatgcttttgagtgcctgaacatgtctaataataattaggaaagaatgtaggatgagattggacctggaaagatttagaatgaaac-tttggaat 23076802  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| || ||| |||| ||||    
T  23076801 tctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagttacccagaaacagagtgccttgttagg-ttttgcgacctttgttgcacgagtt 23076703  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | |||||||||| ||||||||| | || || || ||||||||||    
T  23076702 gttgagagttgaactttggggtagtattgggattttatgatgatgt 23076657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 27754035 - 27753790
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| ||| |    
T  27754035 ccttagatgcttttgagtgcctcaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtggga 27753936  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||  || |||| |||    
T  27753935 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcaagtgacccagaaacagagtgccttgtta-gattttgcgaccttcgttgcacgagt 27753837  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    ||   ||||||||| |||||| ||||| | ||| |||||||||||||    
T  27753836 tgtcgagagttgaagcttgggatagcattaagacttaatgatgatgt 27753790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 22337575 - 22337330
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||      
T  22337575 ccttagatgcttttgagtgtatgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagatttagaatgaaactttttgagt 22337476  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||| | ||||||||| ||||| || || ||| |||| ||||    
T  22337475 tctgacctgaattcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttgttaggtttttgtgacctttgttgcacgagtt 22337376  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | ||||||||||||||| |||| | | ||| |||||||||||||    
T  22337375 gttgagagttgaaccttggagtagtattaagacttaatgatgatgt 22337330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 298476 - 298714
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||| ||| |     
T  298476 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatataggatgagattgaacctggaaagatttagaatgaaacttgtgggat 298575  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| || ||| |||| ||||    
T  298576 tctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgcacgagtt 298674  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatga 240  Q
    | | ||  || |||||| |||||||| | ||| |||||||    
T  298675 gttgaggattaaacctttgggtagcattaagacttaatga 298714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 22737841 - 22738086
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||  ||||||| ||||||||||||| ||| |    
T  22737841 ccttagatgcttttgagtgcctgaacatatctaataatgattaggaaagaatgtaggatgagattgaacctagaaagattgtagaatgaaacttgtggga 22737940  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     ||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| || ||| |||| |||    
T  22737941 ttctgaactgaactcgccacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgccttgttagg-ttttgcgacctttgttgcacgagt 22738039  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    || | ||| |||||||||||||||| | | ||| ||||||| |||||    
T  22738040 tgttgagaattgaaccttggggtagtattaagacttaatgaggatgt 22738086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 32451590 - 32451815
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||| || ||||||| ||||||||||||| ||| |    
T  32451590 ccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacatggaaagattgtagaatgaaacttgtggga 32451689  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| || ||| |||| |||    
T  32451690 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgcacgagt 32451788  T
Q  200 tgctaagagttgaaccttggggtagca 226  Q
    ||   |||| |||||||||||||||||    
T  32451789 tgtcgagagatgaaccttggggtagca 32451815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 22730894 - 22731114
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| ||| |    
T  22730894 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtggga 22730993  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     ||||||||||||||||||||  ||||| ||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||| ||| |||| ||     
T  22730994 ttctgacctgaactcgccacggggagcaaaggctctcgcctcacgagtcacccagaaacagagtgccttgttagg-ttttgcgatctttgttgcacgagc 22731092  T
Q  200 tgctaagagttgaaccttgggg 221  Q
    || | | | |||||||||||||    
T  22731093 tgttgataattgaaccttgggg 22731114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 23071624 - 23071768
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |  ||    
T  23071624 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaa 23071723  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||||| |||||||||| | |||||||||||||||||||||||||    
T  23071724 tctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 23071768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 23286310 - 23286076
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||          |||||||| || ||  |     
T  23286310 ccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacatg----------gaatgaaaattgtgagat 23286221  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    | |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||| || ||| |||  ||||    
T  23286220 tatgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacttgtta-gattttgcgacctttgttgcatgagtt 23286122  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | ||||||||||||| |||||| | | ||| ||||||| |||||    
T  23286121 gttgagagttgaacctttgggtagtattaagacttaatgaagatgt 23286076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 37788 - 38000
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||          |||| |||||| ||  |     
T  37788 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaagatgtaggatgagattgaacctg----------gaattaaacttgtgagat 37877  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||| ||||||| || ||||||| || ||| |||| ||||    
T  37878 tctaacctgaactcgccacggcgagcagaggctctcgcctcgcgagcgacccagaaacatagtgacttgtta-gactttgcgacctttgttgcacgagtt 37976  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    |   ||||||||||||| ||||||    
T  37977 gtcgagagttgaacctttgggtag 38000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 20309554 - 20309383
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||| ||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||          |||| |||||| ||| |     
T  20309554 ccttatatgcttttgagtgcctggatatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaattaaacttgtgggat 20309465  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcga 183  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||    
T  20309464 tctgacctgaactcgccacggtgagcagaggctctcgcctcgcgagtgacccagaaacaaagtgacttgtta-gattttgcga 20309383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 22133878 - 22134020
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||   |||| |||||||||||  |||||  |    
T  22133878 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctaggaagactttagaatgaa--ttttgtga 22133975  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcga 145  Q
    | |||| |||||||||||| | ||||||||||||||||||||||||    
T  22133976 a-ctgaactgaactcgccatggcgagcagaggctctcgcctcgcga 22134020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 23654071 - 23654286
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||          |||| ||||| |||| |     
T  23654071 ccttagatgcttttgactgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaattaaactgttgggat 23654160  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||| ||||||||||||| ||||||             |||||||||||||||||||||||| ||||||| |||||||||| || ||| |||| ||||    
T  23654161 tctgacttgaactcgccacggcgagca-------------cgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgcacgagtt 23654246  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatga 240  Q
    |   ||||||||||||| |||||||| | ||| |||||||    
T  23654247 gtcgagagttgaacctttgggtagcattaagacttaatga 23654286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 4 - 143
Target Start/End: Complemental strand, 28406436 - 28406297
Alignment:
Q  4 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaaatc 102  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||| ||||| |||||||| ||| |||  |||  |    
T  28406436 tagatgcttttgagtgcctgaacatgtctaataataattaggaaagattggagaatgagattgaacctgtaaagattttagaataaaattttgtgaa--c 28406339  T
Q  103 tg-acctgaactcgccacgacgagcagaggctctcgcctcgc 143  Q
    || |||||||||||||| | |||| |||||||||||||||||    
T  28406338 tgaacctgaactcgccatggcgagtagaggctctcgcctcgc 28406297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 28291963 - 28292027
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagatt 65  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  28291963 ccttagatgcttttgagtgcctgaacatgtctaagaatgattaggaaagaatgtagaatgagatt 28292027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 23708282 - 23708500
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaatc 102  Q
    ||||||| ||||||||| |||||||| | || |||||||||||||||   ||||| |||||||||| | ||| || || |||||| |  |||||| | |     
T  23708282 ttagatgtttttgagtgtctgaacatatgtattaatgattaggaaagttcgtagattgagattgaatcggaatagtttaagaatggat-ttttgggagtt 23708380  T
Q  103 tgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttgc 202  Q
      ||||||||||||||   |||| |||||||||||||| |||||| ||||||  ||||| ||| |  ||||||||||||||||| |||||||| |||||     
T  23708381 acacctgaactcgccatagcgagtagaggctctcgccttgcgagttacccagttacagaatgcttgtttaggattttgcgatctttgtcgcacgagttgt 23708480  T
Q  203 taagagttgaaccttggggt 222  Q
    | | ||||||||||||||||    
T  23708481 tgatagttgaaccttggggt 23708500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 25176302 - 25176231
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||  || ||| ||||||||||||||    
T  25176302 ccttagatgtttttgagtgcctgaacatgtctaattatgattaggaaaggttggagattgagattgaacctg 25176231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 23207812 - 23207744
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    ||||||| || ||||||||||||||||| |||||||||||||| |||  | |||| |||||||||||||    
T  23207812 ttagatgattatgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacct 23207744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 220
Target Start/End: Complemental strand, 19672118 - 19672068
Alignment:
Q  170 ttaggattttgcgatctatgtcgcacaagttgctaagagttgaaccttggg 220  Q
    ||||||||||||||||| |||||||| ||||| | ||||||||||||||||    
T  19672118 ttaggattttgcgatctttgtcgcacgagttgttgagagttgaaccttggg 19672068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 39827602 - 39827648
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaag 49  Q
    ||||||| ||||||||||||||| |||| ||||||||||||||||||    
T  39827602 ttagatgattttgagtgcctgaatatgtataataatgattaggaaag 39827648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 22412722 - 22412791
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| || ||||||||||||||||| | |||||||||||| |||  | |||| ||||||||||||||    
T  22412722 ttagatgattctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 22412791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 22740716 - 22740768
Alignment:
Q  94 ttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    |||| |||||| | ||||||||||||| |||||||| ||||||||||||||||    
T  22740716 ttgggaatctggcttgaactcgccacggcgagcagatgctctcgcctcgcgag 22740768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 20519790 - 20519845
Alignment:
Q  14 tgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||||||||||||| |||||||||||||| |||  | |||| |||||||||||    
T  20519790 tgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaac 20519845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 24503532 - 24503473
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  24503532 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 24503473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 12829492 - 12829434
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  12829492 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 12829434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 18786471 - 18786541
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctga 73  Q
    ||||||| ||||||||||||||||| || || || |||||||| |||  | |||| |||||||||||||||    
T  18786471 ttagatgattttgagtgcctgaacacgtatattattgattaggcaagtttttagattgagattgaacctga 18786541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 23005263 - 23005197
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||| |||||||||||||||||||| ||| |||||||||| |||  | | || |||||||||||    
T  23005263 ttagatgtttttgagtgcctgaacatgtataagaatgattaggcaagttttttgattgagattgaac 23005197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 34137454 - 34137412
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 45  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||    
T  34137454 ttagatggttttgagtgcctgaacatgtataagaatgattagg 34137412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 23171460 - 23171416
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtag 56  Q
    |||||||||||||||||| ||| || |||||||||| ||||||||    
T  23171460 tttgagtgcctgaacatgcctagtattgattaggaatgaatgtag 23171416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 23582717 - 23582673
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtag 56  Q
    |||||||||||||||||| ||| || |||||||||| ||||||||    
T  23582717 tttgagtgcctgaacatgcctagtattgattaggaatgaatgtag 23582673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 155; Significance: 3e-82; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 52372 - 52128
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| ||| |    
T  52372 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtggga 52273  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||| || ||| |||| |||    
T  52272 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaactgagtgtcttgttagg-ttttgcgacct-tgttgcacgagt 52175  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    || | |||||||||||||||||||| | | ||| |||||||||||||    
T  52174 tgttgagagttgaaccttggggtagtattaagacttaatgatgatgt 52128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 167651 - 167879
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||          ||| |||||||| ||| |     
T  167651 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttaggatgagattgaacct----------agattgaaacttgtgggat 167740  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| || ||| |||| | ||    
T  167741 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgcacgaatt 167839  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatga 240  Q
    |   ||||||||||||| |||||||| | ||| |||||||    
T  167840 gtcgagagttgaacctttgggtagcattaagacttaatga 167879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 153; Significance: 4e-81; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 364 - 164
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||      
T  364 ccttatatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagatttagaatgaaactttttgagt 265  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||||  |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  264 tctgacctgaactcgccacagcgagtagaggctctcgccacgcgagtgacccagaaacagagtgccttgttaggattttgcgatctgtgtcgcacaagtt 165  T
Q  201 g 201  Q
    |    
T  164 g 164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 151; Significance: 7e-80; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 20863 - 20618
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| ||| |    
T  20863 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattatagaatgaaacttgtggga 20764  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     |||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||| || ||| |||| |||    
T  20763 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagcgacctagaaacagagtgccttgtta-gattttgcgacctttgttgcacgagt 20665  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    ||   |||||||||||||||  ||||| | ||| |||||||||||||    
T  20664 tgtcgagagttgaaccttggaatagcattaagacttaatgatgatgt 20618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 147; Significance: 2e-77; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 802 - 557
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||| |||||||||||||||||||||    
T  802 ccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctagaaagaatttagaatgaaacttttggaa 703  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     ||||| ||||||||||| || |||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||| | || ||| |||  |||    
T  702 -tctgaactgaactcgccgcggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaggtttttgcaacctttgttgcatgagt 604  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    || | |||||||||||||||||||| | ||||| ||||||| |||||    
T  603 tgttgagagttgaaccttggggtagtattgagacttaatgaggatgt 557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 3 - 246
Target Start/End: Complemental strand, 3928 - 3685
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaaat 101  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||| |||||| |||||| ||| | |    
T  3928 ttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaatgattgtagaatcaaacttgtgggatt 3829  T
Q  102 ctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttg 201  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||  |||||||| |||||||| || ||| |||| |||||    
T  3828 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccaaaaacagagtgagttgttagg-ttttgcgacctttgttgcacgagttg 3730  T
Q  202 ctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
     | ||| |||||| ||||||||| | | ||| ||||||| |||||    
T  3729 ttgagaattgaactttggggtagtattaagacttaatgaggatgt 3685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 147; Significance: 2e-77; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 13552 - 13307
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||| ||| |    
T  13552 ccttagatgcttttgagtgcctgaacatgtctaattatgattaggaaagaatgtaggatgagattgaatctgaaaagattgtagaatgaaacttgtggga 13453  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||| || ||| |||| |||    
T  13452 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaactgagtgtcttgttagg-ttttgcgacctttgttgcacgagt 13354  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    || | |||||||||| ||||||||| | || || ||||||| |||||    
T  13353 tgttgagagttgaactttggggtagtattgggacttaatgaagatgt 13307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 34580 - 34437
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |  ||    
T  34580 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttggagaa 34481  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcga 145  Q
    ||||||| |||||||||| | ||||||||||||||||||||||||    
T  34480 tctgacc-gaactcgccatggcgagcagaggctctcgcctcgcga 34437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 147; Significance: 2e-77; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 40371 - 40127
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||| || ||||||||||||| |||||||| |||||||||||||||| | |||| ||||||||| |||||||||    
T  40371 ccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaggaatgtaggatgagattgaacctgaca-gattgtagaatgaa-cttttggaa 40274  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||| || ||| |||| |||    
T  40273 atctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtaccttgttaggtgtttgcgacctttgttgcacgagt 40174  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    || | |||||||||||||||||||| | ||||| |||||||||||||    
T  40173 tgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 40127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 339612 - 339853
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    ||||| |||||||||||||||||||  |||||||||||||||||||| |||||||| ||||||||||||||| ||||||| ||||||||| ||||||| |    
T  339612 ccttaaatgcttttgagtgcctgaatttgtctaataatgattaggaatgaatgtaggatgagattgaacctggaaagattgtagaatgaa-cttttggga 339710  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| || ||| |||| |||    
T  339711 atctgacatgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaatagagtgccttgttagg-ttttgcgacctttgttgcacgagt 339809  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatga 243  Q
     | |||| ||||||||||||||||| | ||||| ||||||||||    
T  339810 cgttaagggttgaaccttggggtagtattgagacttaatgatga 339853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 137; Significance: 1e-71; HSPs: 4)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 125042 - 124800
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||   ||||||| ||||||| ||||||||||||| ||| |    
T  125042 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgag---gaacctggaaagattgtagaatgaaacttgtggga 124946  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||| || ||| |||| |||    
T  124945 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaaaagagtgtcttgtta-gattttgcgacctttgttgcacgagt 124847  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    ||   |||||||||||||||| ||||| | ||| ||||||| |||||    
T  124846 tgtcgagagttgaaccttgggatagcattaagacttaatgaggatgt 124800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 63021 - 62932
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaa 89  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||| ||| | |||||||||||    
T  63021 ccttagatgtttttgagtgcatgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaatattttagaatgaa 62932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 135965 - 136023
Alignment:
Q  14 tgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| ||||||||| |||||||||||||| |||  | |||| ||||||||||||||    
T  135965 tgagtgcttgaacatgtataataatgattaggcaagtttttagattgagattgaacctg 136023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 144673 - 144731
Alignment:
Q  14 tgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| ||||||||| |||||||||||||| |||  | |||| ||||||||||||||    
T  144673 tgagtgcttgaacatgtataataatgattaggcaagtttttagattgagattgaacctg 144731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 136; Significance: 6e-71; HSPs: 5)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 4 - 246
Target Start/End: Complemental strand, 40313 - 40072
Alignment:
Q  4 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaaatc 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||| |||||||||||||||||   ||    
T  40313 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatggaggatgagattgaacctggaaagattgtagaatgaaacttttggtt-tc 40215  T
Q  103 tgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttgc 202  Q
    | ||||| |||||||||| ||||||||||||||||||||||| |||||| |||||| ||||||||||||| |||||||||| || ||| |||||| |||     
T  40214 taacctgtactcgccacggcgagcagaggctctcgcctcgcgggtgacctagaaaccgagtgccttgttatgattttgcgacctttgttgcacaatttgt 40115  T
Q  203 taagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | ||||||||||||| |||||||| ||||| ||||||| |||||    
T  40114 tgagagttgaacctt-gggtagcattgagacttaatgaggatgt 40072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 16 - 146
Target Start/End: Original strand, 59179 - 59308
Alignment:
Q  16 agtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaatctgacctgaactcg 115  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||| |  || |||||| |||||||    
T  59179 agtgcctgaacatgtctaataatgattaggacagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaacctgacc-gaactcg 59277  T
Q  116 ccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||| | |||||||||||||||||||||||||    
T  59278 ccatggcgagcagaggctctcgcctcgcgag 59308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 26662 - 26555
Alignment:
Q  24 aacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaaatctgacctgaactcgccacgac 122  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||| ||||||||||||||||| | ||||||||||| |||||||| |    
T  26662 aacatgtctaataatgattaggaaagaatgtaggatgagattaaacctggaaagattgtagaatgaaacttttgg-attctgacctgaagtcgccacggc 26564  T
Q  123 gagcagagg 131  Q
    |||||||||    
T  26563 gagcagagg 26555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 39592 - 39669
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga 78  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  39592 ccttagatgcttttgagtacctgaacatgtctattaatgattaggaaagaatgtagaatgagattgaacctggaaaga 39669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 143 - 246
Target Start/End: Complemental strand, 26213 - 26110
Alignment:
Q  143 cgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttgctaagagttgaaccttggggtagcactgagaattaatgatg 242  Q
    ||||||||||||||||  ||||||||||||||||||||||| || ||| |||| | ||| | |||||||||||||||||||||| ||||| ||||||| |    
T  26213 cgagtgacccagaaaccaagtgccttgttaggattttgcgacctttgttgcacgatttgttgagagttgaaccttggggtagcattgagacttaatgagg 26114  T
Q  243 atgt 246  Q
    ||||    
T  26113 atgt 26110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 133; Significance: 4e-69; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 6 - 221
Target Start/End: Original strand, 8198 - 8413
Alignment:
Q  6 gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaaatctg 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||| ||||    
T  8198 gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttttggaattctg 8297  T
Q  105 acctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttgcta 204  Q
     ||| |||||||||||  ||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||  || |||| ||||| |     
T  8298 gcctaaactcgccacggtgagtagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttagg-ttttgcgaccttcgttgcacgagttgttg 8396  T
Q  205 agagttgaaccttgggg 221  Q
    |||||||||| ||||||    
T  8397 agagttgaacgttgggg 8413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 131; Significance: 6e-68; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 23342 - 23097
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||| ||||||| ||||||  || ||||||||    
T  23342 ccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggatctggaaagattgtagaattgaa-ttttggaa 23244  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     ||||| |||| ||||||||  ||||||||||| |||||||||||||||||| |||||||||||| ||||||||| |||||||| || ||| |||| |||    
T  23243 ttctgaactgagctcgccacagcgagcagaggccctcgcctcgcgagtgacctagaaacagagtgtcttgttaggtttttgcgacctttgttgcacgagt 23144  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    || | |||||||||||||||||||| | ||||| |||||||||||||    
T  23143 tgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 23097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 131; Significance: 6e-68; HSPs: 3)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 68 - 246
Target Start/End: Complemental strand, 28223 - 28045
Alignment:
Q  68 acctgaaaagatttagaatgaaacttttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgcct 167  Q
    ||||| |||||||||||||||||||||| ||| |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  28223 acctggaaagatttagaatgaaactttttgaattctgacctgaactcgccacggcgagcaaaggctctcgcctcgcgagtgacccagaaacagagtgcct 28124  T
Q  168 tgttaggattttgcgatctatgtcgcacaagttgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    ||| |||||||||| |||| |||||||||||||| |||||||||||||||||||||| | ||||| |||||||||||||    
T  28123 tgtcaggattttgcaatctgtgtcgcacaagttgttaagagttgaaccttggggtagtattgagacttaatgatgatgt 28045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 28996 - 28925
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28996 ccttagatgcttttgagttcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 28925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 1368 - 1436
Alignment:
Q  5 agatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctga 73  Q
    ||||| |||||||||||||||||||| || ||||||||||  |||  | |||| |||||||||||||||    
T  1368 agatgattttgagtgcctgaacatgtatattaatgattagacaagtttttagattgagattgaacctga 1436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 131; Significance: 6e-68; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 51545 - 51770
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||| ||||||| | ||||||||||| ||| |    
T  51545 ccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctggaaagattgtcgaatgaaacttgtggga 51644  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     | |||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||| ||||||| |||||||||| || ||| |||| |||    
T  51645 ttttgacctgaactcgccacggcgagcagaggctctcacctcgctagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgcacgagt 51743  T
Q  200 tgctaagagttgaaccttggggtagca 226  Q
    ||   ||||||||||||||||||||||    
T  51744 tgtcgagagttgaaccttggggtagca 51770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 171
Target Start/End: Complemental strand, 32994 - 32826
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct-gaaaagatttagaatgaaacttttggaaat 101  Q
    ||||||| || ||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||| | ||| ||  | ||||||  | |||||| | |    
T  32994 ttagatgattctgagtgcctgaacatgtgtaataatgattaggaaagattctagattgagattgaacttggaatagtctaagaatg-gatttttgggagt 32896  T
Q  102 ctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtt 171  Q
       |||||||||||||| | |||| |||||| |||||||||||||  ||||||  ||||| |||||||||    
T  32895 tacacctgaactcgccatggcgagtagaggccctcgcctcgcgagctacccagttacagaatgccttgtt 32826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 129; Significance: 9e-67; HSPs: 2)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 674 - 837
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||    
T  674 ccttatatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaatctgaaaagattgtagaatg-aacttttggaa 772  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtg 164  Q
    |||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||    
T  773 atctgacctgaactcgccacggtgagcggaggctctcgcctcgcgagtgacccagaaacagagtg 837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 2987 - 3057
Alignment:
Q  176 ttttgcgatctatgtcgcacaagttgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    |||||||| || ||| |||| ||||| | |||||||||||||||||||| | ||||| |||||||||||||    
T  2987 ttttgcgacctgtgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 3057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 1739 - 1932
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||    
T  1739 ccttagatg-ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaac-tttggaa 1836  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcac 195  Q
    |||||||||||| |||||| | |||||||||||||||||||||||||||||||||  ||||| ||| |  ||||||||||||||||| ||||||||    
T  1837 atctgacctgaattcgccatggcgagcagaggctctcgcctcgcgagtgacccagttacagaatgcttgtttaggattttgcgatctttgtcgcac 1932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 8935 - 8690
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||  ||||||| || |||| ||||| ||| |    
T  8935 ccttagatgcttttgagtgcctgaatatgtctaatagtgattaggaaagaatgtaggatgagattgaacctagaaagattgtaaaatggaacttgtggga 8836  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     |||||||||||||||||||| | || ||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||| || ||| |||| |||    
T  8835 ttctgacctgaactcgccacggccagtagaggctctcgcctcgcgaatgacccagaaacagagtgtcttgttagg-ttttgcgacctttgttgcacgagt 8737  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    || | ||||||||||||||| |||| | | ||| |||||||||||||    
T  8736 tgttgagagttgaaccttggagtagtattaagacttaatgatgatgt 8690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 20572 - 20426
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||      
T  20572 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaataagattgaacctggaaagatttagaatgaaacttttggagt 20473  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||    
T  20472 tctgacctgagctcgccacgacgagcagaggctctcgcctcgcgagt 20426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 127; Significance: 1e-65; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 2311 - 2066
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| ||| |    
T  2311 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtggga 2212  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     |||||||||||||||||| | |||| ||||||| ||||||| ||||||||||  |||||||||||||||||| ||||||| || || ||| |||| |||    
T  2211 ttctgacctgaactcgccatggcgagtagaggctatcgcctcacgagtgaccctaaaacagagtgccttgtta-gattttgtgacctttgttgcacgagt 2113  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    ||   |||||||||||||||| ||| | | ||| ||||||| |||||    
T  2112 tgtcgagagttgaaccttgggatagtattaagacttaatgaggatgt 2066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 207180 - 207324
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||| ||||| ||||||||||||||| |  ||    
T  207180 ccttagatgcctttgagtgcctgaacatgtctaatattgattaggagagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggagaa 207279  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||| |||||||||||| | |||||||||||||||||||||||||    
T  207280 tctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 207324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 119214 - 119280
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||| ||||||||||||||| |||| |||||||||||||  |||  | |||| |||||||||||    
T  119214 ttagatgattttgagtgcctgaatatgtataataatgattagacaagtttttagattgagattgaac 119280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 124; Significance: 9e-64; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 23963 - 24181
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||  | ||||||||||||| ||| |     
T  23963 ccttagattcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacctggaaaattgtagaatgaaacttgtgggat 24062  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||| || ||| |||| ||||    
T  24063 tctgacctgaactcgccacagcgagcagaggctctcgcctcgcgagtgacctagaaacaaagtgccttgtta-gattttgcgacctttgttgcacgagtt 24161  T
Q  201 gctaagagttgaaccttggg 220  Q
    |   |||||||||| |||||    
T  24162 gtcgagagttgaactttggg 24181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 5782 - 6027
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||  |||||| | |||||||| ||  || |    
T  5782 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattgtaggatgagattgaacctgggaagattattgaatgaaatttgcggga 5881  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     ||||||||||||| |||||| |||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||| || ||| |||| |||    
T  5882 ttctgacctgaacttgccacggcgagcagaggctctcgcctcgttagtgacccagaaacagagtgccttgtta-gattttgcgacctttgttgcacgagt 5980  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    |    ||||| |||||||||| ||||| | ||| |||||||||||||    
T  5981 tatcgagagtggaaccttgggatagcattaagacttaatgatgatgt 6027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 89 - 246
Target Start/End: Complemental strand, 39848 - 39691
Alignment:
Q  89 aacttttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctat 188  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  39848 aacttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtcaggattttgcgatctgt 39749  T
Q  189 gtcgcacaagttgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    ||||||||||||| |||| ||||||||||||||||| | ||||| ||||| |||||||    
T  39748 gtcgcacaagttgttaagggttgaaccttggggtagtattgagacttaataatgatgt 39691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 10618 - 10378
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattt-agaatgaaacttttggaa 99  Q
    |||||||||||||||||||||| |||||| ||| || ||||||||||||||||       |||||||||||| |||||||| |||||||||  |||  ||    
T  10618 ccttagatgcttttgagtgccttaacatgcctagtagtgattaggaaagaatg-------agattgaacctggaaagattttagaatgaaaaattttcaa 10526  T
Q  100 at-ctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaag 198  Q
    || ||||||||||||||||||| |||||||||  || |||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||    
T  10525 attctgacctgaactcgccacggcgagcagagcttcccgcctcgcgagtgacctagaaacaaagtgccttgttaggattttgcgatctgtgtcgcacaag 10426  T
Q  199 ttgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    ||| |||||||||||||||||||||| | ||||| ||||| |||||||    
T  10425 ttgttaagagttgaaccttggggtagtattgagacttaataatgatgt 10378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 89 - 246
Target Start/End: Original strand, 74964 - 75121
Alignment:
Q  89 aacttttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctat 188  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  74964 aacttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtcaggattttgcgatctgt 75063  T
Q  189 gtcgcacaagttgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    ||||||||||||| |||| ||||||||||||||||| | ||||| ||||| |||||||    
T  75064 gtcgcacaagttgttaagggttgaaccttggggtagtattgagacttaataatgatgt 75121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 721 - 949
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||          ||| |||||||| ||| |     
T  721 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttaggatgagattgaacct----------agattgaaacttgtgggat 810  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| || ||| |||| | ||    
T  811 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgcacgaatt 909  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatga 240  Q
    |   ||||||||||||| |||||||| | ||| |||||||    
T  910 gtcgagagttgaacctttgggtagcattaagacttaatga 949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 13660 - 13426
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||          ||||||||||| ||| |     
T  13660 ccttatatgcttttgagtgcctgaaaatgtctaataatgattaggaaagaatgtaggatgagactgaacctg----------gaatgaaacttgtggcat 13571  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||| || ||| |||| ||||    
T  13570 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacctagaatcagagtgccttgtta-gattttgcgacctttgttgcacgagtt 13472  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    |   | |||||||||||||| ||||| | ||| |||||||||||||    
T  13471 gtcgacagttgaaccttgggatagcattaagacttaatgatgatgt 13426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 114; Significance: 8e-58; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 623 - 868
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaactt-ttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||      |  |||||||||||| ||||||    
T  623 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattgtagaacgagattgaacctggtttagtagagaatgaaacttgttggaa 722  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
    ||||||||||||||||||| | |||||||||| || ||||||| |||||||| |||||||||| | |||||||||||||| ||| || ||| |||| ||     
T  723 atctgacctgaactcgccatggcgagcagaggttcccgcctcgtgagtgacctagaaacagagagtcttgttaggatttttcgacctttgttgcacgagc 822  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatg 245  Q
    || | |||||||||||||| ||||| | ||||| |||||| |||||    
T  823 tgttgagagttgaaccttgaggtagtattgagacttaatggtgatg 868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 8153 - 8221
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    |||| |||| || |||| ||||||||||||  ||||||||||||| |||  | ||||||||||||||||    
T  8153 ccttggatgtttatgagggcctgaacatgtacaataatgattaggcaaggttttagaatgagattgaac 8221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 111; Significance: 5e-56; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 4983 - 4738
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||| |||||||||| |||||| |||| |||| ||||||||||||||||||||||||||| ||||||||| ||||||||       
T  4983 ccttagatgcttttgagtgcctaaacatgtctattaatgactagggaagattgtagaatgagattgaacctgaaaagattttagaatg-aacttttgtcg 4885  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
    ||| ||||||  ||||||| | |||||| ||||||||||||||| ||  ||||||||||||| |||| |||||||||||||||| || ||| |||| |||    
T  4884 atcagacctgtcctcgccatggcgagcaaaggctctcgcctcgcaagctacccagaaacagaatgccatgttaggattttgcgacctttgttgcacgagt 4785  T
Q  200 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    || |||||||||||||||| ||||| | ||||| ||| ||| |||||    
T  4784 tgttaagagttgaaccttgaggtagtattgagacttattgaagatgt 4738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 2106 - 2250
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |  ||    
T  2106 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaa 2205  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||||| |||||||||| | |||||||||||||||||||||||||    
T  2206 tctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 2250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 109; Significance: 8e-55; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 10098 - 10310
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||          |||| |||||| ||| |     
T  10098 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaattaaacttgtgggat 10187  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |  ||| |||| ||||    
T  10188 tctgacctgaactcgccacggggagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgaccattgttgcacgagtt 10286  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    |   ||||||||||| | ||||||    
T  10287 gtcgagagttgaacccttgggtag 10310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 109; Significance: 8e-55; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 9 - 224
Target Start/End: Complemental strand, 16539 - 16324
Alignment:
Q  9 gcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaaatctgacc 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||| ||||||  || |||||||| ||||| |    
T  16539 gcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggacgagattgaacctggaaagattgtagaattgaa-ttttggaattctgaac 16441  T
Q  108 tgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttgctaaga 207  Q
    ||| ||||||||| ||| ||||||| ||| |||||| |||||||||||||||||| | ||||||||| |||||||| || ||| |||| ||||| | |||    
T  16440 tgagctcgccacggcgatcagaggccctcacctcgcaagtgacccagaaacagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgaga 16341  T
Q  208 gttgaaccttggggtag 224  Q
    ||||||||||| |||||    
T  16340 gttgaaccttgaggtag 16324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 32620 - 32843
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattt-agaatgaaacttttggaa 99  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| || || |||||||||||||||||| |||||||| ||||||||  |||||  |    
T  32620 ccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaggactggagaatgagattgaacctgtaaagattttagaatgaat-ttttgtga 32718  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     |   |||  ||||||||||  |||| |||||||| |||||||||||||||||| ||||||| || ||||||||||||||||||||| |||||||| | |    
T  32719 gttgcaccctaactcgccacagcgaggagaggctcccgcctcgcgagtgacccataaacagaatgtcttgttaggattttgcgatctgtgtcgcaccaat 32818  T
Q  200 tgctaagagttgaaccttggggtag 224  Q
    || ||||||||||||||||||||||    
T  32819 tgttaagagttgaaccttggggtag 32843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 46385 - 46162
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagattt-agaatgaaacttttggaa 99  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| || || |||||||||||||||||| |||||||| ||||||||  |||||  |    
T  46385 ccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaggactggagaatgagattgaacctgtaaagattttagaatgaat-ttttgtga 46287  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
     |   |||  ||||||||||  |||| |||||||| |||||||||||||||||| ||||||| || ||||||||||||||||||||| |||||||| | |    
T  46286 gttgcaccctaactcgccacagcgaggagaggctcccgcctcgcgagtgacccataaacagaatgtcttgttaggattttgcgatctgtgtcgcaccaat 46187  T
Q  200 tgctaagagttgaaccttggggtag 224  Q
    || ||||||||||||||||||||||    
T  46186 tgttaagagttgaaccttggggtag 46162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 106; Significance: 5e-53; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 724 - 886
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||          |||| |||||| |||||     
T  724 ccttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaattaaacttgtggaat 813  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttag 173  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  814 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtaacccagaaacagagtgacttgttag 886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 105; Significance: 2e-52; HSPs: 2)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 15276 - 15499
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||| | ||| ||||||||||||| ||||| |    
T  15276 ccttagatgcttttgagtgcctgaatatgtttaataatgattaggaaagaatgtagaatgagattgaatctggatagattttagaatgaaac-tttggga 15374  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
    |||||||||||||||||||   |||||||||||||||||||||||||||||| |   ||| | | | |  |||||||||| |||||| |||||||| | |    
T  15375 atctgacctgaactcgccatagcgagcagaggctctcgcctcgcgagtgacctatttacaaaatacttgcttaggatttttcgatctttgtcgcacgaat 15474  T
Q  200 tgctaagagttgaaccttggggtag 224  Q
     | | ||||||||||||||||||||    
T  15475 cgttgagagttgaaccttggggtag 15499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 13102 - 13032
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctga 73  Q
    ||||||| |||||||||||||| ||||| || ||||||||||| |||  | |||| |||||||||||||||    
T  13102 ttagatgattttgagtgcctgaccatgtatattaatgattaggcaagtttttagattgagattgaacctga 13032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 102; Significance: 1e-50; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 17240 - 17024
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||| |||||||| |||| ||||  |    
T  17240 ccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggatagattttagaataaaac-tttgaga 17142  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 199  Q
    || |||||||||||||||| | |||||||||||||||||||||||||||||| |   ||||| | | |  ||||||||||||||||| ||| |||| |||    
T  17141 atatgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacctatttacagaatacttgtttaggattttgcgatctttgtagcacgagt 17042  T
Q  200 tgctaagagttgaacctt 217  Q
     | | | |||||||||||    
T  17041 cgttgatagttgaacctt 17024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 146
Target Start/End: Original strand, 7471 - 7576
Alignment:
Q  40 attaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaatctgacctgaactcgccacgacgagcagaggctctcgcc 139  Q
    ||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| |  ||||||| |||||||||||| | | ||||||||||||||||    
T  7471 attaggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggataatctga-ctgaactcgccatggcaagcagaggctctcgcc 7569  T
Q  140 tcgcgag 146  Q
    |||||||    
T  7570 tcgcgag 7576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 100; Significance: 2e-49; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 11185 - 11416
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||          ||||||||||| ||| |     
T  11185 ccttagattcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaatgaaacttgtgggat 11274  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
     ||||||||||||||||| | |||| |||||||||| ||||||||||||| |||||||| |||| ||||||| |||||||||| || ||| |||| ||||    
T  11275 actgacctgaactcgccaaggcgagaagaggctctcacctcgcgagtgacacagaaacaaagtgacttgtta-gattttgcgacctttgttgcacgagtt 11373  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatga 243  Q
    |   ||||||||||||| |||||| | | ||| ||||||||||    
T  11374 gtagagagttgaacctttgggtagaattaagacttaatgatga 11416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 14099 - 14028
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| ||||||||||||||| |||| |||||||||||||| |||  | |||| |||||||| |||||    
T  14099 ccttagatgattttgagtgcctgaatatgtataataatgattaggtaagtttttagattgagattggacctg 14028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 13944 - 13739
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||          |||| |||||| ||  |     
T  13944 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaggatgtagcatgagattgaacctg----------gaattaaacttgtgagat 13855  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||  | ||| |||| ||||    
T  13854 tctgagctgaactcgccacggcgagcagaggctctcgcctcgcgagcgacccagaaacagagtgacttgtta-gattttgcgacttttgttgcacgagtt 13756  T
Q  201 gctaagagttgaacctt 217  Q
    |   |||||||||||||    
T  13755 gtcgagagttgaacctt 13739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 16118 - 15974
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||| ||| |  ||    
T  16118 ccttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagactcaaaatgaaaatttagagaa 16019  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||||| |||||||||| | |||||||||||||||||||||||||    
T  16018 tctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 15974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 12388 - 12166
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||| |   ||| ||||||||  |||||||||    
T  12388 ccttagatgcttttgagtgtctgaatatgtttaataatgattaggaaagaatgtagaatgagattgaacctggattaattaagaatgaactttttggaaa 12289  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
     ||||||||||||||||| | |||| |||||||||| ||||||||||  ||||   |||||   |||  ||||||||||||||||| |||| ||| |||     
T  12288 -ctgacctgaactcgccatggcgagtagaggctctcacctcgcgagttgcccaattacagaagccctgtttaggattttgcgatctttgtcacacgagtc 12190  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    | | ||||||||||||||||||||    
T  12189 gttgagagttgaaccttggggtag 12166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 4 - 201
Target Start/End: Original strand, 15140 - 15326
Alignment:
Q  4 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaatct 103  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||||          |||| |||||| | | | |||    
T  15140 tagatgcttttgagtgccttaatatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaataaaacttgtaggattct 15229  T
Q  104 gacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttg 201  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| || ||| |||| |||||    
T  15230 gacctgaactcgccacggagagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgcacgagttg 15326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 94; Significance: 7e-46; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 28941 - 29081
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||| ||| |  ||    
T  28941 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctagaaagacttagaatgaaaatttagagaa 29040  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcg 142  Q
    ||||||| ||||| |||| | |||||||||||||||||||||    
T  29041 tctgacc-gaactagccatggcgagcagaggctctcgcctcg 29081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 93; Significance: 3e-45; HSPs: 3)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 3930 - 3718
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||  |||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||          ||||||||||| ||| |     
T  3930 ccttagatgactttgagtgcctgaacatgactagtaatgattaggaaagaatgtaggatgagattgaacctg----------gaatgaaacttgtgggat 3841  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||| | |||||||||||||||| |||||||||||||| ||||||||||||||||| | || |||| || || ||| |||| ||||    
T  3840 tctgacctgaactcgccatggcgagcagaggctctcgtctcgcgagtgacccggaaacagagtgccttgtga-gactttgtgacctttgttgcacgagtt 3742  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    | | ||||||||||||| ||||||    
T  3741 gttgagagttgaacctttgggtag 3718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 7994 - 7782
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||  |||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||          ||||||||||| ||| |     
T  7994 ccttagatgactttgagtgcctgaacatgactagtaatgattaggaaagaatgtaggatgagattgaacctg----------gaatgaaacttgtgggat 7905  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||| | |||||||||||||||| |||||||||||||| ||||||||||||||||| | || |||| || || ||| |||| ||||    
T  7904 tctgacctgaactcgccatggcgagcagaggctctcgtctcgcgagtgacccggaaacagagtgccttgtga-gactttgtgacctttgttgcacgagtt 7806  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    | | ||||||||||||| ||||||    
T  7805 gttgagagttgaacctttgggtag 7782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 27305 - 27374
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| |||||||||||||||||||| |||||||||||||| |||  | |||  ||||||||||||||    
T  27305 ttagatgattttgagtgcctgaacatgtataataatgattaggcaagtttttagtttgagattgaacctg 27374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 12470 - 12611
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||  |||||||||||||| |  ||    
T  12470 ccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaagacatagaatgaaactttggagaa 12569  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgc 143  Q
    ||||| |||||||||||| | ||||||||||||||||||||||    
T  12570 tctga-ctgaactcgccatggcgagcagaggctctcgcctcgc 12611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 2401 - 2172
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| ||||||||||||||| ||||||||||| |||||||| |||||||| |||||||||||||||          |||| ||||||  || |     
T  2401 ccttagatgcctttgagtgcctgaacgtgtctaataataattaggaaggaatgtaggatgagattgaacctg----------gaattaaacttgagggat 2312  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
     ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| | ||||| |||||||||| || ||| |||| ||||    
T  2311 gctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacatgtta-gattttgcgacctttgttgcacgagtt 2213  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgat 241  Q
    |   ||||||||||||| |||||| | | ||| ||||||||    
T  2212 gtcgagagttgaacctttgggtaggattaagacttaatgat 2172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 17669 - 17794
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||| ||||||||||||| ||| |    
T  17669 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggatagattgtagaatgaaacttgtggga 17768  T
Q  100 atctgacctgaactcgccacgacgag 125  Q
     |||||||||||||||||||| ||||    
T  17769 ttctgacctgaactcgccacggcgag 17794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 7059 - 6830
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| ||||||||||||||| ||||||||||| |||||||| |||||||| |||||||||||||||          |||| ||||||  || |     
T  7059 ccttagatgcctttgagtgcctgaacgtgtctaataattattaggaaggaatgtaggatgagattgaacctg----------gaattaaacttgagggat 6970  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
     ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||| || ||| |||| ||||    
T  6969 gctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccataaacagagtgacatgtta-gattttgcgacctttgttgcacgagtt 6871  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgat 241  Q
    |   ||||||||||||| |||||| | | ||| ||||||||    
T  6870 gtcgagagttgaacctttgggtaggattaagatttaatgat 6830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 7955 - 8099
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| |  ||    
T  7955 ccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggagaa 8054  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||| | | |||||||||| | |||||||||||||||||||||||||    
T  8055 tct-aacagaactcgccatggcgagcagaggctctcgcctcgcgag 8099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 53134 - 53203
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| ||||||||||||||||| || |||||||||||||| |||  | |||| ||||||||||||||    
T  53134 ttagatgattttgagtgcctgaacaagtataataatgattaggcaagtttttagattgagattgaacctg 53203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 89; Significance: 7e-43; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 1363 - 1151
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| |||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||          ||||||||||| ||| |     
T  1363 ccttagatgcctttgagtgcctgaacattactaataatgattaggaaagaatgtaggatgagattgaacctg----------gaatgaaacttgtgggat 1274  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||| |||||||||| | |||||||||||||||||||| |||||||||| |||||| |||||||||| | || ||||||| || ||| |||| ||||    
T  1273 tctgaccagaactcgccatggcgagcagaggctctcgcctcacgagtgacccggaaacaaagtgccttgtga-gactttgcgacctttgttgcacgagtt 1175  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    | | |||||||||| || ||||||    
T  1174 gttgagagttgaacttttgggtag 1151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 89; Significance: 7e-43; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 385 - 172
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||          |||| |||||| ||| |     
T  385 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaatctg----------gaattaaacttgtgggat 296  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||| | |||||||||||||||||||||| ||||||||| ||  |||||| ||||||||  |||||| | || ||| |||| ||||    
T  295 tctgacctgaactcgccatggcgagcagaggctctcgcctcgcaagtgacccataataagagtgacttgttagatttttgcaacctttgttgcacgagtt 196  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    |   | ||||||||||| ||||||    
T  195 gtcgacagttgaacctttgggtag 172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 5161 - 4948
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||          |||| |||||| ||| |     
T  5161 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaatctg----------gaattaaacttgtgggat 5072  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    |||||||||||||||||| | |||||||||||||||||||||| ||||||||| ||  |||||| ||||||||  |||||| | || ||| |||| ||||    
T  5071 tctgacctgaactcgccatggcgagcagaggctctcgcctcgcaagtgacccataataagagtgacttgttagatttttgcaacctttgttgcacgagtt 4972  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    |   | ||||||||||| ||||||    
T  4971 gtcgacagttgaacctttgggtag 4948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 89; Significance: 7e-43; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 16728 - 16560
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||          ||| |||||| ||| |     
T  16728 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggacgagattgaacctga----------aattaaacttatgggat 16639  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttg 180  Q
    | ||||| ||||||| |||| |||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||    
T  16638 tttgaccagaactcggcacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacttgtt-ggattttg 16560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 32513 - 32361
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||          |||| |||||| ||| |     
T  32513 ccttagatgcttttgagtgcctgaacatgtctaataatgactaggaaagaatgtgggatgagattgaacctg----------gaattaaacttgtgggat 32424  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagt 163  Q
    |||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  32423 tctgacttgaacttgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagt 32361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 52028 - 51857
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||| ||||| |||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||          |||||||||||  || |     
T  52028 cctttgatgcctttgagtgcctgaacaagtctaataatgattaggaaagaatgtaggacgagattgaacctg----------gaatgaaacttacgggat 51939  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcga 183  Q
    ||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  51938 tctaacctgagctcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcga 51857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 5297 - 5135
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||          ||||||||||| ||        
T  5297 ccttagatgcttttgagtgcatgaagatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaatgaaacttgtgaggt 5208  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttag 173  Q
    |||||||||||||||||||| |||| ||||||||| ||||||||||||||| |||||||||||| ||||||||    
T  5207 tctgacctgaactcgccacggcgagtagaggctcttgcctcgcgagtgacctagaaacagagtgacttgttag 5135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 10370 - 10226
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| ||||||||||| |||||||||| || ||||||||||||||||||| ||||||||||||||| ||||| |||||| |||||||| |  ||    
T  10370 ccttagatgcctttgagtgcctaaacatgtctattattgattaggaaagaatgtaggatgagattgaacctggaaagacttagaaggaaactttggagaa 10271  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||| |||||||||||| | |||||||||||||||||||||||||    
T  10270 tctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 10226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 9495 - 9639
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| ||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||| ||| ||||| ||||||||||||||| |  ||    
T  9495 ccttagatgcctttgagtgcctgaacatgtctaatattgattacgaaagaatgtaggatgagattgaatctggaaagacttagaatgaaactttggagaa 9594  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||| ||||||||| || | |||||||||||||||||||||||||    
T  9595 tctga-ctgaactcgtcatggcgagcagaggctctcgcctcgcgag 9639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 24312 - 24456
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||  |||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||  ||||| ||||||||||||||| |  ||    
T  24312 ccttagatgcccttgagtgcctgaacatgtctaatattgattaggaaagaatttaggatgagattgaacctagaaagacttagaatgaaactttggataa 24411  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||| |||||||||||| | |||||||||||||||||||||||||    
T  24412 tctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 24456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 13 - 146
Target Start/End: Original strand, 80005 - 80137
Alignment:
Q  13 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaatctgacctgaac 112  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| |  ||||||| ||||||    
T  80005 ttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggagaatctga-ctgaac 80103  T
Q  113 tcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||| || | |||||||||||||||||||||||||    
T  80104 tcgacatggcgagcagaggctctcgcctcgcgag 80137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 86; Significance: 4e-41; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 133113 - 132967
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||| |||||||||||| |||  |||    
T  133113 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagactttagaatgaaattttgtgaa 133014  T
Q  100 atctg-acctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
      ||| |||||||||||||| | ||||||||||||||||||||||||||    
T  133013 --ctgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 132967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 57466 - 57408
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||||||||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  57466 tttgagtgcctgaacatacctagtattgattaggaatgaatgtagaatcagattgaacc 57408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 20087 - 20305
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |   ||| |||||| ||||||| | ||    
T  20087 ccttagatgcttttgagttcctgaacatgtttaataatgagtaggaaagaatgtagaatgagattgaacctggattaattaagaatg-aactttttggaa 20185  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttg-ttaggattttgcgatctatgtcgcacaagt 199  Q
     ||||||||||||||||| | |||| ||||||||||||||||| |||  || |   |||||  |||||| ||||||||||||| ||| |||||||| |||    
T  20186 gctgacctgaactcgccatggcgagtagaggctctcgcctcgcaagttgcctaattacaga-agccttgtttaggattttgcggtctttgtcgcacgagt 20284  T
Q  200 tgctaagagttgaaccttggg 220  Q
     | | ||||||||||||||||    
T  20285 cgttgagagttgaaccttggg 20305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 146
Target Start/End: Complemental strand, 476 - 344
Alignment:
Q  13 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaatctgacctgaac 112  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||| | |||||||| |||||| |  ||||||| ||||||    
T  476 ttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaatacttagaatggaactttggagaatctga-ctgaac 378  T
Q  113 tcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    |||||| | |||||||||||||||||||||||||    
T  377 tcgccatggcgagcagaggctctcgcctcgcgag 344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 28470 - 28616
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||   |||| |||||||||||| |||  |||    
T  28470 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctacgaagactttagaatgaaattttgtgaa 28569  T
Q  100 atctg-acctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
      ||| |||||||||||||| | ||||||||||||||||||||||||||    
T  28570 --ctgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 28616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 32543 - 32397
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||| |||||||||||| |||  |||    
T  32543 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagactttagaatgaaattttgtgaa 32444  T
Q  100 atctg-acctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
      ||| |||||||||||||| | ||||||||||||||| ||||||||||    
T  32443 --ctgaacctgaactcgccatggcgagcagaggctctcacctcgcgagt 32397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 4803 - 5015
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||          ||||  ||||| ||| |     
T  4803 ccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaattgaacttatgggat 4892  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
    ||||||||||||||||||    ||||||||| |||||||||||||||||| ||||||||||||| ||| || |||||||| || || ||| |||| ||||    
T  4893 tctgacctgaactcgccaaagagagcagaggatctcgcctcgcgagtgacacagaaacagagtgacttatt-ggattttgagacctttgttgcacgagtt 4991  T
Q  201 gctaagagttgaaccttggggtag 224  Q
    |   ||||||||||| | ||||||    
T  4992 gtcgagagttgaacccttgggtag 5015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 18619 - 18712
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt-tagaatgaaactt 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||    
T  18619 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaactt 18712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 47435 - 47273
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||| |||||||||||||||          |||| |||||| ||| |     
T  47435 ccttagatgcttttgagtgtctgaatatgtctaataatgattaggaatgaatgtaggatgagattgaacctg----------gaattaaacttgtgggat 47346  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttag 173  Q
    |||||||||| |||||||||  | ||||||||||||||||||||||||||||| || ||||||| ||||||||    
T  47345 tctgacctgagctcgccacggagcgcagaggctctcgcctcgcgagtgacccaaaaccagagtgacttgttag 47273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 2464 - 2609
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||| ||||||||| ||||| |||||||||||| || ||       
T  2464 ccttagatgcttttgagtacctgaacatgtctaataatgattaggaaagattggagaatgagtttgaacctgtaaagattttagaatgaaatttgtg--- 2560  T
Q  100 atctg-acctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
    | ||| |||||||||||||| | |||| |||||||||||||||||||||    
T  2561 aactgaacctgaactcgccatggcgagtagaggctctcgcctcgcgagt 2609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 154
Target Start/End: Complemental strand, 580 - 437
Alignment:
Q  11 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaaatctgacctg 109  Q
    |||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||| || ||||| ||||||||| || |||||  | |   |||||    
T  580 ttttgagtgcctaaacatgtctaataatgattaggaaagattggagaatgagattgaacttggaaagattttagaatg-aatttttgtgagttgcacctg 482  T
Q  110 aactcgccacgacgagcagaggctctcgcctcgcgagtgacccag 154  Q
    ||||||||| | |||||||||||||||||||||||||||||||||    
T  481 aactcgccatggcgagcagaggctctcgcctcgcgagtgacccag 437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 7271 - 7126
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||| |||||||||||  |||| |      
T  7271 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatgaa--tttttgtg 7174  T
Q  100 atctg-acctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    | ||| |||||||||||||| | |||| |||||||||||||| |||||    
T  7173 aactgaacctgaactcgccatggcgagtagaggctctcgccttgcgag 7126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 8476 - 8405
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||| ||| ||||| ||| ||||| |||| ||||||||||||| ||||| | |||| ||||||||||||||    
T  8476 ccttaaatgtttttgggtgtctgaatatgtgtaataatgattagaaaagattctagattgagattgaacctg 8405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 9536 - 9391
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||| ||||| ||||| |||||||||||  |||| |      
T  9536 ccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagtttagaatgaa--tttttgtg 9439  T
Q  100 atctg-acctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    | ||| |||||||||||||| | |||| ||||||||||||||||||||    
T  9438 aactgaacctgaactcgccatggcgagtagaggctctcgcctcgcgag 9391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 101854 - 101709
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| | ||| |||||||||||  |||||  |    
T  101854 ccttagaagtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggagagactttagaatgaa--ttttgtga 101757  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
    |  |||||||||||||||| | |||||||||||||| |||||| ||||    
T  101756 acttgacctgaactcgccatggcgagcagaggctcttgcctcgggagt 101709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 2746 - 2825
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatt 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  2746 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagatt 2825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 21350 - 21126
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 100  Q
    ||||||||| |||| |||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||          ||||||||||| |         
T  21350 ccttagatgttttttagtgcctgaacatgtctaataatgattatgaaagaatgtaggatgagattgtacctg----------gaatgaaacttgt----- 21266  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagtt 200  Q
         ||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||| |||||| |  |||||||| || ||| |||| ||||    
T  21265 -----cctgaactcgccacggcgagcagaggctctcgcctcgtgagtgacccaaaaacagagtgacttgtt-gagttttgcgacctttgttgcacgagtt 21172  T
Q  201 gctaagagttgaaccttggggtagcactgagaattaatgatgatgt 246  Q
    | | ||||||||||||| |||||| | | ||| ||||||| |||||    
T  21171 gatcagagttgaacctttgggtagtattaagacttaatgaagatgt 21126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 45450 - 45596
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||| ||  |||||||||||||||||  |||| |||||||||||  |||||  |    
T  45450 ccttagatgtttttgagtgcctgaatatgtctaataatgattaggaaagattggggaatgagattgaacctggtaagactttagaatgaattttttgtga 45549  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||   |||||||||||||| | |||| ||||||||||||||||||||    
T  45550 attgtacctgaactcgccatggcgagtagaggctctcgcctcgcgag 45596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 19726 - 19573
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||| ||||| ||||||||| || ||||        
T  19726 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaggattggagaatgagattgaacctggaaagattttagaatg-aatttttatgt 19628  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccag 154  Q
     |   |||||||||||||| | |||||||||||||||||||||||| ||||||||    
T  19627 gttgcacctgaactcgccatggcgagcagaggctctcgcctcgcgaatgacccag 19573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 1962 - 2108
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaaacttttggaa 99  Q
    ||||||||| ||||||||  |||||||||||||||||||||||||||||| || ||||||||||||||| | |||||| |||||||||||| |||  |||    
T  1962 ccttagatgtttttgagtcactgaacatgtctaataatgattaggaaagattggagaatgagattgaacataaaaagactttagaatgaaattttgtgaa 2061  T
Q  100 atctg-acctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
      ||| |||||||||||||| | | ||||||||||||||||||||||||    
T  2062 --ctgaacctgaactcgccatggcaagcagaggctctcgcctcgcgagt 2108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 13269 - 13343
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaa 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  13269 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgagcctgaaa 13343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 62; Significance: 8e-27; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 161145 - 161056
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaaga-tttagaatgaa 89  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| | ||| |||||||||||    
T  161145 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggagagactttagaatgaa 161056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 447007 - 446965
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 45  Q
    ||||||| ||||| |||||||||||||| ||||||||||||||    
T  447007 ttagatgattttgggtgcctgaacatgtataataatgattagg 446965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 497938 - 497896
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 45  Q
    ||||||| ||||| |||||||||||||| ||||||||||||||    
T  497938 ttagatgattttgtgtgcctgaacatgtataataatgattagg 497896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 6489 - 6557
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6489 ccttagatgccttttagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 6557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 6561 - 6625
Alignment:
Q  106 cctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgt 170  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  6561 cctgaactcgccacggcgagcagaggctctcgcctcgcaagtgacccagaaatagagtgccttgt 6625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 201
Target Start/End: Complemental strand, 1733 - 1546
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaatc 102  Q
    ||||||||||||| |||||||||||||||||||| |||||||  || |  |||| | | |||||||||||          |||| |||||| ||||| ||    
T  1733 ttagatgcttttgcgtgcctgaacatgtctaatattgattagtgaatagggtaggacgtgattgaacctg----------gaattaaacttatggaattc 1644  T
Q  103 tgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttg 201  Q
    | | |||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||| |||||| ||| ||||||| || ||| |||| |||||    
T  1643 taaactgaactcgcgacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacttgtt-ggagtttgcgacctttgttgcacgagttg 1546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 201
Target Start/End: Complemental strand, 7710 - 7523
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaatc 102  Q
    ||||||||||||| |||||||||||||||||||| |||||||  || |  |||| | | |||||||||||          |||| |||||| ||||| ||    
T  7710 ttagatgcttttgcgtgcctgaacatgtctaatattgattagtgaatagggtaggacgtgattgaacctg----------gaattaaacttatggaattc 7621  T
Q  103 tgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttg 201  Q
    | | |||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||| |||||| ||| ||||||| || ||| |||| |||||    
T  7620 taaactgaactcgcgacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacttgtt-ggagtttgcgacctttgttgcacgagttg 7523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 10604 - 10540
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagatt 65  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  10604 ccttagatgcttttgagtgcatgaacatgtctaataatgattaggaaagaatgtaggatgagatt 10540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 3392 - 3321
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||    
T  3392 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaacctg 3321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 13400 - 13227
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct-gaaaagatttagaatgaaacttttggaa 99  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||| || ||| | ||||||||||| ||| || || |||||| || |||||  |    
T  13400 ccttagatgtttttgagtgcctgaacatgtctaattatgattaggaaagattggagattaagattgaacctggaatagtttaagaatg-aatttttgtga 13302  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttagg 174  Q
     |   |||||||||||||| | |||| |||||| |||||||||||||  | ||||  ||||| ||||||||||||    
T  13301 gttgcacctgaactcgccatggcgagtagaggccctcgcctcgcgagctaaccagttacagaatgccttgttagg 13227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 29892 - 29950
Alignment:
Q  13 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    ||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  29892 ttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 29950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 41888 - 41946
Alignment:
Q  13 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    ||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  41888 ttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 41946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 43445 - 43590
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct-gaaaagatttagaatgaaacttttggaa 99  Q
    ||||||||| ||||||||||||||||||||||||| |||||||| ||||| | |||| ||||||||||||| ||| || || ||||||  | |||||| |    
T  43445 ccttagatgtttttgagtgcctgaacatgtctaattatgattagaaaagattctagattgagattgaacctggaatagtttaagaatg-gatttttggga 43543  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
     |   ||||| |||||||| |||||| ||||||||||||||||||||    
T  43544 gttacacctgtactcgccatgacgagtagaggctctcgcctcgcgag 43590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 47365 - 47510
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct-gaaaagatttagaatgaaacttttggaa 99  Q
    ||||||||| ||||||||||||||||||||||||| |||||||| ||||| | |||| ||||||||||||| ||| || || ||||||  | |||||| |    
T  47365 ccttagatgtttttgagtgcctgaacatgtctaattatgattagaaaagattctagattgagattgaacctggaatagtttaagaatg-gatttttggga 47463  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
     |   ||||| ||| |||| |||||| ||||||||||||||||||||    
T  47464 gttacacctgtactagccatgacgagtagaggctctcgcctcgcgag 47510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 2305 - 2376
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||    
T  2305 ccttaaatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaacctg 2376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 147
Target Start/End: Complemental strand, 10987 - 10842
Alignment:
Q  2 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct-gaaaagatttagaatgaaacttttggaaa 100  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||   |||| ||||||||||||| ||| || || |||||| || |||||  |     
T  10987 cttagatgtttttgagtgcctgaacatgtgtaataatgattaggaaagatcctagactgagattgaacctggaatagtttaagaatg-aatttttgtgag 10889  T
Q  101 tctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
    |   ||||||||||||||   |||| |||||||||||||||||||||    
T  10888 ttacacctgaactcgccatagcgagtagaggctctcgcctcgcgagt 10842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 51; Significance: 3e-20; HSPs: 4)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 130367 - 130222
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct-gaaaagatttagaatgaaacttttggaa 99  Q
    |||| |||| ||||||||||||||||||||||| | |||||||| ||||| | |||| ||||||||||||| ||| || || ||||||  | |||||| |    
T  130367 cctttgatgtttttgagtgcctgaacatgtctagttatgattagaaaagattctagattgagattgaacctggaatagtttaagaatg-gatttttggga 130269  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||   |||| ||||||||| | |||||||||||||||||||||||||    
T  130268 attacacctaaactcgccatggcgagcagaggctctcgcctcgcgag 130222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 224
Target Start/End: Original strand, 60479 - 60598
Alignment:
Q  106 cctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtt-aggattttgcgatctatgtcgcacaagttgcta 204  Q
    |||||||||||||   |||| |||||||||||||||||||||  |||||  ||||| | | ||||| ||| ||||| ||||| |||||||| || || ||    
T  60479 cctgaactcgccatagcgagtagaggctctcgcctcgcgagtttcccagttacagaatacattgtttagggttttgtgatctttgtcgcacgagatgtta 60578  T
Q  205 agagttgaaccttggggtag 224  Q
     |||||||||||||||||||    
T  60579 tgagttgaaccttggggtag 60598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 60301 - 60367
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||| || ||||||||||||||||| |||||||||||||| |||  | |||| |||||||||||    
T  60301 ttagatgattctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaac 60367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 242479 - 242435
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtag 56  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||    
T  242479 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 242435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 690 - 755
Alignment:
Q  2 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattga 67  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||    
T  690 cttagatgtttttgagtgcctgaacatgtataataatgattaggaaagattgtagattgagattga 755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 50; Significance: 1e-19; HSPs: 4)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 224
Target Start/End: Original strand, 15866 - 15983
Alignment:
Q  108 tgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtt-aggattttgcgatctatgtcgcacaagttgctaag 206  Q
    |||||||||||   |||| | |||| ||||||||||||||  |||||  ||||| ||||||||| ||||||||||||||| |||||||||||||| || |    
T  15866 tgaactcgccatagcgagtataggccctcgcctcgcgagttgcccagttacagaatgccttgtttaggattttgcgatctttgtcgcacaagttgttatg 15965  T
Q  207 agttgaaccttggggtag 224  Q
    ||||||||||| ||||||    
T  15966 agttgaacctttgggtag 15983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 13435 - 13367
Alignment:
Q  157 acagagtgccttgtt-aggattttgcgatctatgtcgcacaagttgctaagagttgaaccttggggtag 224  Q
    ||||| ||||||||| ||||||||||||||| |||||||| ||||| || ||||| |||||||||||||    
T  13435 acagaatgccttgtttaggattttgcgatctttgtcgcacgagttgttatgagttaaaccttggggtag 13367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 13665 - 13596
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| || | ||||||||||||||| |||||||||||||| |||  | |||| ||||||||||||||    
T  13665 ttagatgattctaagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctg 13596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 3230 - 3162
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||||| ||||||||||||||| ||||  ||||||||||||| |||  | |||| |||||||||||    
T  3230 ccttagatgattttgagtgcctgaatatgtacaataatgattaggcaagtttttagattgagattgaac 3162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 6053 - 5985
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||||| || ||| |||||||||||    
T  6053 ccttagatgtttttgagtgcctgaacaggtctaataatgattaggaaagattggagattgagattgaac 5985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 7718 - 7864
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct-gaaaagatttagaatgaaacttttggaa 99  Q
    ||||||||| ||||||||| |||||||||| |||||||||||||||||||   |||| ||||||||||||| ||| || || |||||| || ||||||      
T  7718 ccttagatgtttttgagtgtctgaacatgtgtaataatgattaggaaagatcctagactgagattgaacctagaatagtttaagaatg-aatttttgggg 7816  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgcgagt 147  Q
     |   ||||||||||||||   |||| |||||||||||||||||||||    
T  7817 gttacacctgaactcgccatagcgagtagaggctctcgcctcgcgagt 7864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 1039 - 897
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaac-ttttggaa 99  Q
    |||||||||  |||||||||  |||||||||||||| |||||||||  |||||||  ||||||| | ||||| ||||| ||||||||||||   |||| |    
T  1039 ccttagatgtctttgagtgctagaacatgtctaatattgattaggagtgaatgtaagatgagataggacctggaaagacttagaatgaaacaacttggga 940  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcg 142  Q
     |||| ||||||||||||| | |||||||| | ||||||||||    
T  939 ttctgccctgaactcgccatggcgagcagatgttctcgcctcg 897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 10229 - 10289
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatga 61  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||| | ||||||||    
T  10229 ccttagatgtttttgagtgcctgaacatgtctaataatgattagtaaagattttagaatga 10289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 12453 - 12384
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| ||||||||| |||||||||| ||||||||||||||||||| | |||| ||||||||||||||    
T  12453 ttagatgattttgagtgtctgaacatgtataataatgattaggaaagattttagattgagattgaacctg 12384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 5784 - 5852
Alignment:
Q  2 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||||||| |||||||| ||||||||||| ||||||||||||||||| | |||||| ||||||||||||    
T  5784 cttagatgtttttgagtacctgaacatgtataataatgattaggaaaaattgtagattgagattgaacc 5852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 145
Target Start/End: Complemental strand, 6987 - 6852
Alignment:
Q  11 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct-gaaaagatttagaatgaaacttttggaaatctgacctg 109  Q
    ||||||||||||| |||||||||||||| ||||||||||| || ||| ||||||||||||| ||| || || |||| ||||||| ||| | |   |||||    
T  6987 ttttgagtgcctggacatgtctaataataattaggaaagattggagattgagattgaacctggaatagtttaagaacgaaacttgtgggagttatacctg 6888  T
Q  110 aactcgccacgacgagcagaggctctcgcctcgcga 145  Q
    ||||||||| | ||||  ||||| ||| ||||||||    
T  6887 aactcgccatggcgagtggaggccctcccctcgcga 6852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 7073 - 6931
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct-gaaaagatttagaatgaaacttttggaa 99  Q
    ||||||||| |||||||||||| ||||||| |||| |||||||||||||| | |||| | ||||||||||| ||| || || ||||||  | |||||| |    
T  7073 ccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattaagattgaacctggaatagtttaagaatg-gatttttggga 6975  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgc 143  Q
    ||   |||||||||||||| | |||| |||||| ||||||||||    
T  6974 attacacctgaactcgccatggcgagtagaggccctcgcctcgc 6931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 14453 - 14311
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct-gaaaagatttagaatgaaacttttggaa 99  Q
    ||||||||| |||||||||||| ||||||| |||| |||||||||||||| | |||| | ||||||||||| ||| || || ||||||  | |||||| |    
T  14453 ccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattaagattgaacctggaatagtttaagaatg-gatttttggga 14355  T
Q  100 atctgacctgaactcgccacgacgagcagaggctctcgcctcgc 143  Q
    ||   |||||||||||||| | |||| |||||| ||||||||||    
T  14354 attacacctgaactcgccatggcgagtagaggccctcgcctcgc 14311  T

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Target: scaffold0020 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 15491 - 15562
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| |||||||||||| ||||||| |||| |||||||||||||| | |||| ||||||||||||||    
T  15491 ccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattgagattgaacctg 15562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 80796 - 80727
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| |||||||||||||||||||| |||||||||||||| |||  | |||| ||||||||||||||    
T  80796 ttagatgattttgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctg 80727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 227942 - 227881
Alignment:
Q  11 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    |||||||||||| ||||||| ||||||||||||||||||| | |||| ||||||||||||||    
T  227942 ttttgagtgcctaaacatgtataataatgattaggaaagattctagattgagattgaacctg 227881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 224
Target Start/End: Complemental strand, 225763 - 225644
Alignment:
Q  105 acctgaactcgccacgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttgcta 204  Q
    ||||||| ||||||  || || |||||| || ||||||||||| ||  ||  ||||| ||| |  ||||||||||||||||| |||||||| ||||| |     
T  225763 acctgaaatcgccataacaagtagaggcccttgcctcgcgagttacatagttacagaatgcttgtttaggattttgcgatctttgtcgcacgagttgttg 225664  T
Q  205 agagttgaaccttggggtag 224  Q
    ||||||||||||||||||||    
T  225663 agagttgaaccttggggtag 225644  T

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Target: scaffold0586 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 2313 - 2245
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||||| ||||||||||||||| |||   | |||||||||||||||| ||||||||||||||||||    
T  2313 ccttagatgtttttgagtgcctgaagatgcacactaatgattaggaaagattgtagaatgagattgaac 2245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 10933 - 10970
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataat 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  10933 ccttagatgcttttgagtgcctgaacatgtctaataat 10970  T

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Target: scaffold0040 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 103244 - 103315
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| | || ||||||||||||||||| |||||||||||||| |||  | |||| ||||||||||||||    
T  103244 ccttagaggattctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctg 103315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 25640 - 25574
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||| ||||||||||||||| |||| |||||||||||||| |||  | |||| |||||||||||    
T  25640 ttagatgattttgagtgcctgaaaatgtataataatgattaggcaagtttttagattgagattgaac 25574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 24182 - 24252
Alignment:
Q  2 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    |||||||| ||||||||||||||| || | |||||||||||||| |||  | |||| ||||||||||||||    
T  24182 cttagatgattttgagtgcctgaatatatataataatgattaggcaagcttttagattgagattgaacctg 24252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 332850 - 332784
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 69  Q
    ||||||| ||||||||||||||| |||| ||| ||||||||||||||  | |||| |||||||||||    
T  332850 ttagatgattttgagtgcctgaatatgtataagaatgattaggaaagtttttagattgagattgaac 332784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 58102 - 58161
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  |||||||||||    
T  58102 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 58161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 7188 - 7119
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| ||||||||| ||||| |||| |||||||||||||| |||  | |||| ||||||||||||||    
T  7188 ttagatgattttgagtgactgaatatgtataataatgattaggcaagtttttagattgagattgaacctg 7119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 268186 - 268117
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||| || | ||||||||||||||| |||||||||||||| |||  | |||| ||||||||||||||    
T  268186 ttagatgattctaagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctg 268117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 307529 - 307460
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  307529 ccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 307460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 1350 - 1278
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctga 73  Q
    |||||||||||||||||||||| || ||||||| ||| ||||||   |  || ||||||||||||||||||||    
T  1350 ccttagatgcttttgagtgccttaagatgtctattaaagattagatgatgatttagaatgagattgaacctga 1278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 38833 - 38762
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| || ||||||| |||| |||| |||||||||||||| |||  | |||| ||||||||||||||    
T  38833 ccttagatgattctgagtgcgtgaatatgtataataatgattaggcaagtttttagattgagattgaacctg 38762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 29221 - 29150
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 72  Q
    ||||||||| ||||||||||||||| || | |||||||||||||| |||  | |||| |||||||| |||||    
T  29221 ccttagatgattttgagtgcctgaatatatataataatgattaggcaagtttttagattgagattggacctg 29150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 3560 - 3618
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||||||||||||||||  ||| ||||||||||| | |||||||| || ||||||||||    
T  3560 tttgagtgcctgaacatacctagtaatgattagggatgaatgtaggatcagattgaacc 3618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 10599 - 10541
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  ||||||||||    
T  10599 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacc 10541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 14224 - 14282
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  ||||||||||    
T  14224 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacc 14282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 27064 - 27006
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  27064 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 27006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 35531 - 35575
Alignment:
Q  1 ccttagatgcttttgagtgcctgaacatgtctaataatgattagg 45  Q
    ||||| ||| ||||||||||||||| |||| ||||||||||||||    
T  35531 ccttaaatgattttgagtgcctgaatatgtataataatgattagg 35575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 55271 - 55313
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 45  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||    
T  55271 ttagatgattttgagtgcctgaacatgtataagaatgattagg 55313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 125797 - 125855
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  125797 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 125855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 9762 - 9704
Alignment:
Q  12 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 70  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||| |  ||||||||||    
T  9762 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacc 9704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 8247 - 8190
Alignment:
Q  16 agtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctga 73  Q
    ||||||||||||||| | |||||||||||| |||  | |||| |||||||||||||||    
T  8247 agtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctga 8190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 13290 - 13233
Alignment:
Q  14 tgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    ||||||||||||||||| | |||||||||||| |||  | |||| |||||||||||||    
T  13290 tgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 13233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 1384 - 1452
Alignment:
Q  3 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 71  Q
    ||||||| || ||||||||||||||||| ||||||||| |||| |||  | ||||  ||||||||||||    
T  1384 ttagatgattctgagtgcctgaacatgtataataatgagtaggcaagtttttagatggagattgaacct 1452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 3981 - 4033
Alignment:
Q  94 ttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||||| ||| |||| |||||||| | |||||||| ||||||||||||||||    
T  3981 ttggaaacctggcctgtactcgccatggcgagcagatgctctcgcctcgcgag 4033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 3287 - 3339
Alignment:
Q  94 ttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||||||||| | || |||||||| | |||||||| ||||||||||||||||    
T  3287 ttggaaatctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 3339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 2189 - 2137
Alignment:
Q  94 ttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||||||||||| || |||||||| | |||| ||| ||||||||||||||||    
T  2189 ttggaaatctgacttgtactcgccatggcgagtagatgctctcgcctcgcgag 2137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 9871 - 9819
Alignment:
Q  94 ttggaaatctgacctgaactcgccacgacgagcagaggctctcgcctcgcgag 146  Q
    ||||||||||||| || |||||||| | |||| ||| ||||||||||||||||    
T  9871 ttggaaatctgacttgtactcgccatggcgagtagatgctctcgcctcgcgag 9819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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