View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0759_high_31 (Length: 292)
Name: NF0759_high_31
Description: NF0759
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0759_high_31 |
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Alignment Details
Target: chr6 (Bit Score: 149; Significance: 1e-78; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 7724389 - 7724606
Alignment:
| Q |
1 |
ttctttgatgattcagacattccctgatctttcgaactacaaatgcatagaaaatatagcatagtagctataagagtactcaaaacttagttgcatgatg |
100 |
Q |
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| T |
7724389 |
ttctttgatgattcagacattccctgatctttcgaactacaaatgcaaagaaaatatagcata-------------tac--aaaacttagttgcatgatg |
7724473 |
T |
|
| Q |
101 |
catatacaaaaattggagaaaattcatatgatttgtttccaaacaaatcaaaaggagagtgaaacaattcatacatattaaacttcgaaaaatgagttac |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |
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| T |
7724474 |
catatacaaaaattggagaaaattcatatgatttgtttccaaacaaatcaaaaggagagtgaaacaatt----catatcaaacttcgaaaaatgagttac |
7724569 |
T |
|
| Q |
201 |
tatgactgattatatacaaagaattcatggcgtctgg |
237 |
Q |
| |
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|||||| |||||||||||||||||||||||| ||||| |
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| T |
7724570 |
tatgaccgattatatacaaagaattcatggcatctgg |
7724606 |
T |
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