View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0759_high_57 (Length: 217)
Name: NF0759_high_57
Description: NF0759
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0759_high_57 |
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Alignment Details
Target: chr7 (Bit Score: 72; Significance: 6e-33; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 27721960 - 27722031
Alignment:
| Q |
1 |
cgatcaacagtaaaaacagtaataaaataagtgcagttcatgtacttacaaaaacgtaagaagatcctggtc |
72 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27721960 |
cgatcaacagtaaaaacagtaataaaataagtgcagttcatgtacttacaaaaacgtaagaagatcctggtc |
27722031 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 148 - 194
Target Start/End: Original strand, 27722116 - 27722162
Alignment:
| Q |
148 |
aaaaaacatagtttaaggttttatattatgtgggtttgagatgtaac |
194 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27722116 |
aaaaaacatagtttaaggttttatattatgtgggtttgagatgtaac |
27722162 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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