View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0759_high_6 (Length: 479)
Name: NF0759_high_6
Description: NF0759
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF0759_high_6 |
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[»] scaffold0225 (1 HSPs) |
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[»] scaffold1140 (1 HSPs) |
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[»] scaffold0266 (1 HSPs) |
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[»] scaffold0467 (2 HSPs) |
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[»] scaffold0218 (1 HSPs) |
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[»] scaffold0022 (1 HSPs) |
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[»] scaffold0008 (2 HSPs) |
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[»] scaffold0120 (1 HSPs) |
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[»] scaffold0462 (1 HSPs) |
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[»] scaffold0615 (1 HSPs) |
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[»] scaffold0673 (1 HSPs) |
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[»] scaffold0610 (1 HSPs) |
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[»] scaffold0009 (1 HSPs) |
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[»] scaffold0021 (4 HSPs) |
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[»] scaffold0465 (2 HSPs) |
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[»] scaffold0124 (1 HSPs) |
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[»] scaffold0302 (2 HSPs) |
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[»] scaffold0162 (2 HSPs) |
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[»] scaffold0141 (1 HSPs) |
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[»] scaffold0011 (5 HSPs) |
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[»] scaffold0138 (1 HSPs) |
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[»] scaffold0049 (1 HSPs) |
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[»] scaffold0561 (1 HSPs) |
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[»] scaffold0151 (1 HSPs) |
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[»] scaffold0170 (1 HSPs) |
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[»] scaffold0112 (1 HSPs) |
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[»] scaffold0058 (1 HSPs) |
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[»] scaffold0193 (1 HSPs) |
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[»] scaffold0018 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 410; Significance: 0; HSPs: 11)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 410; E-Value: 0
Query Start/End: Original strand, 5 - 458
Target Start/End: Original strand, 1660325 - 1660778
Alignment:
Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
T |
1660325 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgtttgctgagg |
1660424 |
T |
 |
Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
|
|
|||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
1660425 |
aagcagagtactggtggatcaatgccaagggcaggcttgagttgggcggtgatgtggtgacctgggccaagttcaaggttgaattcttgaggaagtattt |
1660524 |
T |
 |
Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcg |
304 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |
|
|
T |
1660525 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagccgagtatgcggcgaagtttgaggaactttcg |
1660624 |
T |
 |
Q |
305 |
aggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttc |
404 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||| |
|
|
T |
1660625 |
aggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtgtgaagtttgagagtgggcttaggccggtcatctatcagtacatgtgtgttc |
1660724 |
T |
 |
Q |
405 |
aggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
T |
1660725 |
aggagatccgagactttgatactttggtgcataagtgtcgtatgtttgatgatg |
1660778 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 5 - 458
Target Start/End: Complemental strand, 16104104 - 16103651
Alignment:
Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
|
|
|||| ||| |||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| || | ||||||| |
|
|
T |
16104104 |
ggagtacaaacttgggtgcagggtatggagcggattttccaagctatggtgacgggagatgaccagaaggtcagactagcgactcatgtgcttgctgagg |
16104005 |
T |
 |
Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
|
|
|||| ||| |||||||||| |||||||| || || ||||| ||| ||||| ||||||||||||||| |||||||| | ||||||||||||||||||||| |
|
|
T |
16104004 |
aagcggagcactggtggactaatgccaaaggaagacttgaaatgggaggtgatgtggtgacctgggctaagttcaaagctgaattcttgaggaagtattt |
16103905 |
T |
 |
Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcg |
304 |
Q |
|
|
||| |||||||||||||| |||||||||||||||||||||||| |||| ||||| | |||||||||||| ||||||||||||||||||||||||||||| |
|
|
T |
16103904 |
ccctgaagacttgaggactaagaaggaggttgagtttctgaatttgaatcaaggaagcatgtcggtagccgagtatgcggcgaagtttgaggagctttcc |
16103805 |
T |
 |
Q |
305 |
aggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttc |
404 |
Q |
|
|
||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||| || |
|
|
T |
16103804 |
aggttttttccctacatcaatgctgaagatgctatggtttcgaagtgtgtgaagtttgagagtgggcttaggccggatatctatcagtacatgtgcgtct |
16103705 |
T |
 |
Q |
405 |
aggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |
|
|
T |
16103704 |
aggagatccgagactttcatactttggtgcaaaagtgtcgtatgtttgatgatg |
16103651 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 5 - 458
Target Start/End: Original strand, 21412008 - 21412461
Alignment:
Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
|
|
||||| ||||||||||||||||| ||||||||||| || || |||||||| |||||||||||||| |||| |||| | |||||||||||| | ||||||| |
|
|
T |
21412008 |
ggagctcagacttgggtgcagggcatggagcggatatttcgtgctatggtgacgggagatgaccaaaaggccagattggcgactcatatgcttgctgagg |
21412107 |
T |
 |
Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
|
|
| || |||||||||||||| |||| ||| || || ||||| ||| ||| | || ||||||||||| |||||||| | |||||||| ||||||||||| |
|
|
T |
21412108 |
aggctgagtactggtggactaatgtcaaaggaagatttgagatgggaggagaagttgtgacctgggcgaagttcaaagcagaattcttaaggaagtattt |
21412207 |
T |
 |
Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcg |
304 |
Q |
|
|
||| ||||| ||||| || | ||||||||| || |||||||| ||||| || || | |||||| ||||| ||||||| |||||||||||||||||||||| |
|
|
T |
21412208 |
ccctgaagatttgagaactaggaaggaggtggaatttctgaacctgaagcagggaagcatgtctgtagccgagtatgaggcgaagtttgaggagctttcg |
21412307 |
T |
 |
Q |
305 |
aggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttc |
404 |
Q |
|
|
| ||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||| |
|
|
T |
21412308 |
aagttttgtccgtacatcaatgctgaagatgctatggtttcgaagtgtgtgaagtttgaaagtgggcttaggccggatatctatcagtatatgtgtgttc |
21412407 |
T |
 |
Q |
405 |
aggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
||||||||||||||||||||||||||||||| |||||| | ||||||| ||||| |
|
|
T |
21412408 |
aggagatccgagactttgatactttggtgcataagtgttgcatgtttgttgatg |
21412461 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 5 - 326
Target Start/End: Complemental strand, 17786996 - 17786674
Alignment:
Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaagg-tcagactagcgactcatatgttagctgag |
103 |
Q |
|
|
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||| |
|
|
T |
17786996 |
ggagcacagacttgggtgcagggtatggaacggattttccgagctatggttacgggaaatgaccagaaggctcagactagcgactcatatgctagctgag |
17786897 |
T |
 |
Q |
104 |
gaagcagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtatt |
203 |
Q |
|
|
|||| || | |||||||||| |||||||| || || |||||| ||| ||||| ||||||||||| ||| ||||||||||| |||||||||||||| |||| |
|
|
T |
17786896 |
gaagaagggcactggtggactaatgccaaaggaagacttgagatgggaggtgatgtggtgacctaggctaagttcaaggtcgaattcttgaggaaatatt |
17786797 |
T |
 |
Q |
204 |
tcccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttc |
303 |
Q |
|
|
|||| |||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||| ||||| || |||||||||||||| ||||| ||||| |
|
|
T |
17786796 |
tccctgaagacttgaggaccaagaaggagattgagtttctgaatctgaaacaaggaagcatgtctgtagccgaatatgcggcgaagttcgaggaactttc |
17786697 |
T |
 |
Q |
304 |
gaggttttgtccctacatcaatg |
326 |
Q |
|
|
|||||||| ||| ||||| |||| |
|
|
T |
17786696 |
gaggttttatccttacataaatg |
17786674 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 5 - 458
Target Start/End: Original strand, 16646451 - 16646904
Alignment:
Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
|
|
||||| ||||| ||| |||| || |||||| | || || || |||||||| || | ||||| |||||||| || | || ||||| ||| | ||||||| |
|
|
T |
16646451 |
ggagctcagacatggttgcaaggcatggagagaatctttcgtgctatggtgactagtgatgatcagaaggtgaggttggctactcacatgcttgctgagg |
16646550 |
T |
 |
Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
|
|
| || ||||| |||||||||||||| ||||| || |||||| | || || || || ||||| ||| | | ||||||| ||| || ||||||||||| || |
|
|
T |
16646551 |
aggctgagtattggtggaccaatgctaagggaagacttgagattgatggaggggttgtgacttggacaacgttcaagactgagtttttgaggaagtactt |
16646650 |
T |
 |
Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcg |
304 |
Q |
|
|
|| || || |||||||| | |||||| || ||||| |||||| |||| ||||||| ||||| || || ||||||||||||||||||||||||||| | |
|
|
T |
16646651 |
tccagaggatttgaggactaggaaggaagtggagttcctgaatttgaagcaagggagtatgtccgtggccgagtatgcggcgaagtttgaggagcttgca |
16646750 |
T |
 |
Q |
305 |
aggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttc |
404 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||| |
|
|
T |
16646751 |
aggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtgtgaagtttgagagtgggcttaggccggatatctatcagtacatgtgtgtta |
16646850 |
T |
 |
Q |
405 |
aggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
T |
16646851 |
aggagatccgagactttgatactttggtgcataagtgtcgtatgtttgatgatg |
16646904 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 11 - 458
Target Start/End: Original strand, 22364852 - 22365299
Alignment:
Q |
11 |
cagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgaggaagcag |
110 |
Q |
|
|
||||||||||||||||| || ||| |||| ||||| |||||||| || | |||||| |||||||||| | | ||||| ||| | |||||||| || | |
|
|
T |
22364852 |
cagacttgggtgcagggcatagagaggatattccgtgctatggtgacaagtgatgactagaaggtcaggttggttactcacatgcttgctgaggaggccg |
22364951 |
T |
 |
Q |
111 |
agtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtatttcccgga |
210 |
Q |
|
|
|||| |||||||| ||| | ||||| || |||||| | | || | || ||||| ||||| |||||||| ||||| |||||||||||||||||||| || |
|
|
T |
22364952 |
agtattggtggactaattctaagggaagacttgagattggtggagaagttgtgacttgggcaaagttcaaagttgagttcttgaggaagtatttccctga |
22365051 |
T |
 |
Q |
211 |
agacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcgaggttt |
310 |
Q |
|
|
|| |||||||||| |||||| || ||||| |||| || | ||||||| |||||| |||||||||||| ||||||||||||| ||||||||||| ||| |
|
|
T |
22365052 |
aggtttgaggaccaggaaggaagtagagttcttgaacttgtagcaagggagcatgtctgtagctgagtatacggcgaagtttgaagagctttcgagattt |
22365151 |
T |
 |
Q |
311 |
tgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttcaggaga |
410 |
Q |
|
|
| ||| |||||||||| ||| ||||| ||||||||||||||| |||||||||| |||| |||||||||||| |||||||||||||||||||||||||||| |
|
|
T |
22365152 |
tttccatacatcaatgttgaagatgcaatggtttcgaagtgtgtgaagtttgaaagtgagcttaggccggatatctatcagtatatgtgtgttcaggaga |
22365251 |
T |
 |
Q |
411 |
tccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
||||||| ||||||||||||||| | |||||||||||||||||||||| |
|
|
T |
22365252 |
tccgagattttgatactttggtgtataagtgtcgtatgtttgatgatg |
22365299 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 29 - 458
Target Start/End: Original strand, 16378879 - 16379308
Alignment:
Q |
29 |
atggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgaggaagcagagtactggtggaccaatg |
128 |
Q |
|
|
|||||| |||| || || |||||||| || | ||||| |||||||| || | || ||||| ||| | |||||||| || ||||| ||||||||||||| |
|
|
T |
16378879 |
atggagaggatctttcgtgctatggtgactagtgatgatcagaaggtgaggttggctactcacatgcttgctgaggaggctgagtattggtggaccaatg |
16378978 |
T |
 |
Q |
129 |
ccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtatttcccggaagacttgaggaccaagaa |
228 |
Q |
|
|
| ||||| || |||||| | | || | || ||||| ||| | | |||||||| ||| || ||||||||||| || || || || |||||||| | ||| |
|
|
T |
16378979 |
ctaagggaagacttgagattggtggagaggttgtgacttggacaaggttcaaggctgagtttttgaggaagtactttccagaggatttgaggactaggaa |
16379078 |
T |
 |
Q |
229 |
ggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcgaggttttgtccctacatcaatgct |
328 |
Q |
|
|
||| || ||||| |||||| |||| ||||||| ||||| || || ||||||||||||||||||||||||||| | ||||||||||||||||||||||| |
|
|
T |
16379079 |
ggaagtggagttcctgaatttgaagcaagggagtatgtctgtggccgagtatgcggcgaagtttgaggagcttgcaaggttttgtccctacatcaatgcg |
16379178 |
T |
 |
Q |
329 |
gaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttcaggagatccgagactttgatactt |
428 |
Q |
|
|
||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
T |
16379179 |
gaggatgctatggtttccaagtgtgtgaagtttgaaagtgggcttaggccggacatctatcagtacatgtgtgttcaggagatccgagactttgatactt |
16379278 |
T |
 |
Q |
429 |
tggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
||||||| |||||||||||||||||||||| |
|
|
T |
16379279 |
tggtgcataagtgtcgtatgtttgatgatg |
16379308 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 5 - 267
Target Start/End: Complemental strand, 18421363 - 18421101
Alignment:
Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||| ||||||| ||| | ||||||||||||||||||||||||||||||||| | ||| ||| |
|
|
T |
18421363 |
ggagcacagacttgggtgcagggaatggagcggattttccgatctatggtgacgagggatgaccagaaggtcagactagcgactcatatgcttgctaagg |
18421264 |
T |
 |
Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
|
|
|||||||| |||||||||| |||||||| || || |||||| ||| ||||| ||| ||||||||||| |||||| ||||||||||||||||||||||||| |
|
|
T |
18421263 |
aagcagagcactggtggactaatgccaaaggaagacttgagatgggaggtgatgttgtgacctgggctaagttccaggttgaattcttgaggaagtattt |
18421164 |
T |
 |
Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtc |
267 |
Q |
|
|
||| ||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||| |
|
|
T |
18421163 |
ccctgaagacttgaggaccaacaaggagattgagtttctgaatctataacaagggatcatgtc |
18421101 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 62 - 456
Target Start/End: Complemental strand, 14150139 - 14149746
Alignment:
Q |
62 |
gatgaccagaaggtcagactagcgactcatatgttagctgaggaagcagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtgg |
161 |
Q |
|
|
||||| ||||||||||| | || ||||| ||||| | |||||| || ||||| |||||||| ||||| ||||| | |||||| | | || | || | |
|
|
T |
14150139 |
gatgatcagaaggtcaggttggctactcacatgtttgttgaggaggccgagtattggtggactaatgctaagggaaaacttgagattggtggagaggttg |
14150040 |
T |
 |
Q |
162 |
tgacctgggccaagttcaaggttgaattcttgaggaagtatttcccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggat |
261 |
Q |
|
|
|||| ||||| ||||||||| || || ||||||||||| || | || || |||||||| | ||||||||| ||||| |||| |||| ||||||| |
|
|
T |
14150039 |
tgacttgggctaagttcaagaccgagtttttgaggaagtactttctagaggatttgaggactaggaaggaggtggagttcttgaacttgaagcaagggag |
14149940 |
T |
 |
Q |
262 |
catgtcggtagctgagtatgcggcgaagtttgaggagctttcgaggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagttt |
361 |
Q |
|
|
||||| || |||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||| ||||| || |||||| |||| ||| |
|
|
T |
14149939 |
tatgtccgtggctgagtatgcggcgatgtttgaggagctgtcgaggttttgtccgtacatcaatgctgaggatgcgatggtgtccaagtgtgtgaaattt |
14149840 |
T |
 |
Q |
362 |
gagagtgggcttaggccggacatctatcagtatatgtgtgttcaggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatga |
456 |
Q |
|
|
|| ||||||||||||| ||| |||||| ||||||||||||||| ||||||||||| |||||||| || ||||| ||||||||||||||||||| |
|
|
T |
14149839 |
gaaagtgggcttaggctggatttctatctgtatatgtgtgttcaagagatccgagattttgatacctt-gtgcatcagtgtcgtatgtttgatga |
14149746 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 287 - 456
Target Start/End: Original strand, 19982365 - 19982534
Alignment:
Q |
287 |
aagtttgaggagctttcgaggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatct |
386 |
Q |
|
|
|||||| ||||||| || ||||||||| | || || |||| |||||||||||||||||| || ||| ||||||||||||| | | ||||| || || | |
|
|
T |
19982365 |
aagtttaaggagctatcaaggttttgttcgtatattaatgttgaggatgctatggtttcaaaatgtgagaagtttgagagtcgtttgaggcccgagattt |
19982464 |
T |
 |
Q |
387 |
atcagtatatgtgtgttcaggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatga |
456 |
Q |
|
|
||||||| || || |||| ||||||||||| ||| |||||||||| ||||||| ||||||||||||||| |
|
|
T |
19982465 |
atcagtacatacgttttcatgagatccgagatttttatactttggtacacaagtatcgtatgtttgatga |
19982534 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 223 - 327
Target Start/End: Complemental strand, 976359 - 976255
Alignment:
Q |
223 |
caagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcgaggttttgtccctacatc |
322 |
Q |
|
|
|||||||||| |||||||||| | ||||||||||| | ||| | |||| | |||||||| |||||||||||| | || ||||||||||| |||||| |
|
|
T |
976359 |
caagaaggagattgagtttcttgaactgaaacaaggaaatatgaccatagcaaaatatgcggcaaagtttgaggagttgtccaggttttgtccatacatc |
976260 |
T |
 |
Q |
323 |
aatgc |
327 |
Q |
|
|
||||| |
|
|
T |
976259 |
aatgc |
976255 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 398; Significance: 0; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 398; E-Value: 0
Query Start/End: Original strand, 5 - 458
Target Start/End: Original strand, 21847117 - 21847570
Alignment:
Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||| | |||||||||||| ||||||||| |
|
|
T |
21847117 |
ggagcacagacttgggtgcagggaatggagcggattttccaagctatggttactggtgatgaccagaaggtcagattggcgactcatatgctagctgagg |
21847216 |
T |
 |
Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
|
|
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
21847217 |
aagcagagtactggtggaccaatgccaagggcagacttgagttggaaggtggtgttgtgacctgggccaagttcaaggttgaattcttgaggaagtattt |
21847316 |
T |
 |
Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcg |
304 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |
|
|
T |
21847317 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagccgagtatgcggtgaagtttgaggagctttcg |
21847416 |
T |
 |
Q |
305 |
aggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttc |
404 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
T |
21847417 |
aggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtgtgaagtttgagagtgggcttaggccggacatctatcagtacatgtgtgttc |
21847516 |
T |
 |
Q |
405 |
aggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
T |
21847517 |
aggagattcgagactttgatactttggtgcataagtgtcgtatgtttgatgatg |
21847570 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 5 - 458
Target Start/End: Original strand, 20649135 - 20649588
Alignment:
Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
|
|
||||||||||||||||||||||| ||||||||| |||| ||||||||||| |||||||||||||||||||||||||| |||||||||||| | ||||||| |
|
|
T |
20649135 |
ggagcacagacttgggtgcagggcatggagcgggtttttcgagctatggtgacgggagatgaccagaaggtcagactggcgactcatatgcttgctgagg |
20649234 |
T |
 |
Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
|
|
|||||||| ||| |||||| |||||||| || || |||||||||| ||||| ||| ||||||||||| |||||||| ||||||||||||||||||| ||| |
|
|
T |
20649235 |
aagcagagcacttgtggactaatgccaaaggaagacttgagttgggaggtgatgttgtgacctgggcgaagttcaaagttgaattcttgaggaagtgttt |
20649334 |
T |
 |
Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcg |
304 |
Q |
|
|
||| ||||||||||||||||||||||||||||||||||||||| | |||||||| | |||||| ||||| |||||||||||||||||||||||||||||| |
|
|
T |
20649335 |
ccctgaagacttgaggaccaagaaggaggttgagtttctgaatttaaaacaaggaagcatgtctgtagccgagtatgcggcgaagtttgaggagctttcg |
20649434 |
T |
 |
Q |
305 |
aggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttc |
404 |
Q |
|
|
|||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||| ||| | |
|
|
T |
20649435 |
aggttttgtccctacatcaatgttgaagatgctatggtttcgaagtgtgtgaagtttgagagtgggcttaggccggatatctatcagtaaatgtatgtac |
20649534 |
T |
 |
Q |
405 |
aggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |
|
|
T |
20649535 |
aggagatccgagactttgatactttggtgcataagtgtcgtatgtttaatgatg |
20649588 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 157 - 458
Target Start/End: Complemental strand, 16415934 - 16415634
Alignment:
Q |
157 |
tgtggtgacctgggccaagttcaaggttgaattcttgaggaagtatttcccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaa |
256 |
Q |
|
|
||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
T |
16415934 |
tgtggtgacctcggctaagttcaaggttgaattcttgaggaagtatttccccgaagacttgaggaccaagaaggagattgagtttctgaatctgaaacaa |
16415835 |
T |
 |
Q |
257 |
gggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcgaggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctga |
356 |
Q |
|
|
|||||||||| ||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
T |
16415834 |
tggatcatgtctgtagccgaatatgcggcgaagtttgaggaactttcgaggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtgtga |
16415735 |
T |
 |
Q |
357 |
agtttgagagtgggcttaggccggacatctatcagtatatgtgtgttcaggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatga |
456 |
Q |
|
|
||||||||||||||||||||||||| ||||||||||| |||||||| |||| ||||||||||||||||||||||||||| || ||| | ||||||||||| |
|
|
T |
16415734 |
agtttgagagtgggcttaggccggatatctatcagtacatgtgtgtccaggggatccgagactttgatactttggtgcataactgttg-atgtttgatga |
16415636 |
T |
 |
Q |
457 |
tg |
458 |
Q |
|
|
|| |
|
|
T |
16415635 |
tg |
16415634 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 5 - 458
Target Start/End: Original strand, 21193332 - 21193785
Alignment:
Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
|
|
||||| || |||||||||||||| |||||| |||| || | |||||||| ||| | |||||||||||||||||| | ||||||||||| | ||||||| |
|
|
T |
21193332 |
ggagctcaaacttgggtgcagggcatggagaggatattttgtgctatggtgacgagtgatgaccagaaggtcagattgacgactcatatgcttgctgagg |
21193431 |
T |
 |
Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
|
|
| || || || |||||||||||||||||||| || |||||| | | || | || ||||| ||||| |||||||| | ||| ||||||||||||||||| |
|
|
T |
21193432 |
aggccgaatattggtggaccaatgccaagggaagacttgagattgttggggaagtcgtgacttgggcgaagttcaaagctgagttcttgaggaagtattt |
21193531 |
T |
 |
Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcg |
304 |
Q |
|
|
||| ||||| |||||||||| ||||||||| | ||||||||| |||| |||||| ||| || ||||| ||||||||||||||||| ||| |||||||| |
|
|
T |
21193532 |
ccctgaagatttgaggaccaggaaggaggtagcgtttctgaacttgaagtaagggagcatctctgtagccgagtatgcggcgaagttcgagaagctttcg |
21193631 |
T |
 |
Q |
305 |
aggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttc |
404 |
Q |
|
|
||||||||||| ||||||| |||||| ||||| ||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||| |
|
|
T |
21193632 |
aggttttgtccgtacatcattgctgaagatgcgatggtttcgaagtgtgtgaagtttgaaagtgggcttaggccggatatctatcagtatatgtgtgttc |
21193731 |
T |
 |
Q |
405 |
aggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
||||||||||||| ||||||||||||||||| |||||||||| ||||||||||| |
|
|
T |
21193732 |
aggagatccgagattttgatactttggtgcataagtgtcgtaagtttgatgatg |
21193785 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 385; Significance: 0; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 385; E-Value: 0
Query Start/End: Original strand, 5 - 458
Target Start/End: Complemental strand, 15000588 - 15000128
Alignment:
Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
T |
15000588 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgactagaaggtcagactagcgactcatatgttagctgagg |
15000489 |
T |
 |
Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
15000488 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttggggggtgatgtggtgacctgggccaagttcaaggttgaattcttgaggaagtatt- |
15000390 |
T |
 |
Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcg |
304 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||| |
|
|
T |
15000389 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagccgagtatacggcgaagtttgaggaactttcg |
15000290 |
T |
 |
Q |
305 |
aggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttc |
404 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
T |
15000289 |
aggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtgtgaagtttgagagtgggcttaggccggacatctatcagtacatgtgtgttc |
15000190 |
T |
 |
Q |
405 |
aggagatccgagactttgatac--------tttggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
|||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |
|
|
T |
15000189 |
aggagatccgagactttgatactttgatactttggtgcataagtgtcgtatgtttgatgatg |
15000128 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 5 - 458
Target Start/End: Original strand, 15289495 - 15289948
Alignment:
Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
|
|
||||| ||||| ||| |||| || |||||| |||| || || |||||||| || | ||||| |||||||| || | || ||||| ||| | ||||||| |
|
|
T |
15289495 |
ggagctcagacatggttgcaaggcatggagaggatctttcgtgctatggtgactagtgatgatcagaaggtgaggttggctactcacatgcttgctgagg |
15289594 |
T |
 |
Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
|
|
| || ||||| ||| |||||||||| ||||| || |||||| | | || | || ||||| ||| | | |||||||| ||| || ||||||||||| || |
|
|
T |
15289595 |
aggctgagtattggcggaccaatgctaagggaagacttgagattggtggagaggttgtgacttggacaaggttcaaggctgagtttttgaggaagtactt |
15289694 |
T |
 |
Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcg |
304 |
Q |
|
|
|| || || |||||||| | |||||| || ||||| ||||| |||| |||||| ||||| || || ||||||||||||||||||||||||||| | |
|
|
T |
15289695 |
tccagaggatttgaggactaggaaggaagtggagttcttgaatttgaagtaagggagtatgtccgtggccgagtatgcggcgaagtttgaggagcttgca |
15289794 |
T |
 |
Q |
305 |
aggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttc |
404 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||| |
|
|
T |
15289795 |
aggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtgtgaagtttgagaatgggcttaggccggacatctatcagtacatgtgtgttc |
15289894 |
T |
 |
Q |
405 |
aggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
|||||||| |||||||||||||||||||||| |||||||||||||||||||||| |
|
|
T |
15289895 |
aggagatctgagactttgatactttggtgcataagtgtcgtatgtttgatgatg |
15289948 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 194 - 458
Target Start/End: Original strand, 12339400 - 12339664
Alignment:
Q |
194 |
aggaagtatttcccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttg |
293 |
Q |
|
|
||||||||||| || || | ||||||||||||||||| || |||| |||||||||| || | || | |||| || | || ||||| || ||||| | |
|
|
T |
12339400 |
aggaagtattttccagagaatttgaggaccaagaaggaagtgaagttcttgaatctgaagcaggagaacttgtctgttgtggaatatgcagctaagttcg |
12339499 |
T |
 |
Q |
294 |
aggagctttcgaggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagta |
393 |
Q |
|
|
|| | ||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||| | ||||| || || | |||| |
|
|
T |
12339500 |
agaaactttcgaggttttgtccttacatcaatgctgaggatgctatggtttcgaaatgtgtgaagtttgagagtggtttgaggccagagattcactagta |
12339599 |
T |
 |
Q |
394 |
tatgtgtgttcaggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
||||||||||||||||||| | || || ||||| ||||||| |||| ||||||||||||||||| |
|
|
T |
12339600 |
tatgtgtgttcaggagatcagggatttcgataccttggtgcctaagtttcgtatgtttgatgatg |
12339664 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 98 - 374
Target Start/End: Complemental strand, 18272928 - 18272652
Alignment:
Q |
98 |
gctgaggaagcagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgagga |
197 |
Q |
|
|
|||||||| || ||||| |||||||| ||||| ||||| || |||||| | | || | || ||||| ||||| |||||||| | ||| || ||||||| |
|
|
T |
18272928 |
gctgaggaggccgagtattggtggactaatgctaagggaagacttgagattggtggagaggttgtgacttgggcaaagttcaaagctgagtttttgagga |
18272829 |
T |
 |
Q |
198 |
agtatttcccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgagga |
297 |
Q |
|
|
||||||| || ||||| || ||||| | |||| | || ||||| |||| |||| ||||||| |||||| |||||||||||||||||| ||||||||| |
|
|
T |
18272828 |
agtattttccagaagatttaaggactaggaagaaagtggagttcttgaacttgaagcaagggagcatgtccatagctgagtatgcggcgacgtttgagga |
18272729 |
T |
 |
Q |
298 |
gctttcgaggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggctta |
374 |
Q |
|
|
||| |||||||||||| | ||||| |||||||||||||| ||||| | |||||| |||||||||| ||||||||| |
|
|
T |
18272728 |
gctatcgaggttttgttcgtacattaatgctgaggatgcaatggtgcccaagtgtgtgaagtttgaaggtgggctta |
18272652 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 28266083 - 28266152
Alignment:
Q |
214 |
cttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcg |
283 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |
|
|
T |
28266083 |
cttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtctgtagccgagtatgcg |
28266152 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0225 (Bit Score: 358; Significance: 0; HSPs: 1)
Name: scaffold0225
Description:
Target: scaffold0225; HSP #1
Raw Score: 358; E-Value: 0
Query Start/End: Original strand, 5 - 458
Target Start/End: Complemental strand, 27360 - 26907
Alignment:
Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
|
|
|||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |
|
|
T |
27360 |
ggaggacagacttgggtgcaggggatggagcggattttccgagctatggttacgggagatgaccagaaggtcagattagcgactcatatgctagctgagg |
27261 |
T |
 |
Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
|
|
|||||||||||||||||||||||||||| || || |||||| ||| ||||| ||||||||||||||| ||||||||| |||||||||||||||| ||||| |
|
|
T |
27260 |
aagcagagtactggtggaccaatgccaaaggaagacttgagatgggaggtgatgtggtgacctgggctaagttcaagtttgaattcttgaggaattattt |
27161 |
T |
 |
Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcg |
304 |
Q |
|
|
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |
|
|
T |
27160 |
cccgaaagacttgaggaccaagaaggagattgagtttctgaatctgaaacaagggatcatgtcggtagccgagtatgcggcgaagtttgaggaactttct |
27061 |
T |
 |
Q |
305 |
aggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttc |
404 |
Q |
|
|
|||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
T |
27060 |
aggttttgtccctacatcaatgttgaggatgctatgatttcgaagtgtgtgaagtttgagagtgggcttaggccggacatctatcagtacatgtgtgttc |
26961 |
T |
 |
Q |
405 |
aggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |
|
|
T |
26960 |
aggagatccgagactttgatactttggtgcataagtgtcgtatgtttgttgatg |
26907 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1140 (Bit Score: 343; Significance: 0; HSPs: 1)
Name: scaffold1140
Description:
Target: scaffold1140; HSP #1
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 5 - 459
Target Start/End: Complemental strand, 555 - 101
Alignment:
Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
|
|
|||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
T |
555 |
ggagcacatacttgggtgcagggtatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgctagctgagg |
456 |
T |
 |
Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
|
|
|||||||| |||| ||||| |||||||| || ||||||||||||| |||| ||||||||| ||||| |||||||||||||||||||||||||||||||| |
|
|
T |
455 |
aagcagagcactgatggactaatgccaaaggaaggcttgagttgggaggttatgtggtgacgtgggctaagttcaaggttgaattcttgaggaagtattt |
356 |
T |
 |
Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcg |
304 |
Q |
|
|
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||| |||||| |
|
|
T |
355 |
cccgtaagacttgaggaccaagaaggagattgagtttctgaatctgaaacaagggatcatgtctgtagccgagtatgcggcgaagttcgaggaactttcg |
256 |
T |
 |
Q |
305 |
aggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttc |
404 |
Q |
|
|
|||||||||||||||||||||| |||||||| |||| | ||||||||| |||||||||||||||||||||||||||| |||||| |||| |||||||||| |
|
|
T |
255 |
aggttttgtccctacatcaatgttgaggatggtatgatctcgaagtgtttgaagtttgagagtgggcttaggccggatatctattagtacatgtgtgttc |
156 |
T |
 |
Q |
405 |
aggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatgt |
459 |
Q |
|
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
T |
155 |
aggagatccgagactttgatactttggtgcataagtgtcgtatgtttgatgatgt |
101 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0266 (Bit Score: 328; Significance: 0; HSPs: 1)
Name: scaffold0266
Description:
Target: scaffold0266; HSP #1
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 8 - 458
Target Start/End: Original strand, 6200 - 6653
Alignment:
Q |
8 |
gcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgaggaag |
107 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
T |
6200 |
gcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttgactgaggaag |
6299 |
T |
 |
Q |
108 |
cagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtatttccc |
207 |
Q |
|
|
||||| ||| |||||||||||||||||| ||||||||||||| | || ||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
T |
6300 |
cagagcactagtggaccaatgccaagggaaggcttgagttgggaaatgatgtggtgacctgggctaagttcaaggttgaattcttgaggaagtatttccc |
6399 |
T |
 |
Q |
208 |
ggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgagga---gctttcg |
304 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| || || ||||||||||||||||| ||||| |||||| |
|
|
T |
6400 |
tgaagacttgaggaccaagaaggaggttgagtttctgaatctgaagcaaggaatcatgtctgtggccgagtatgcggcgaagttcgaggaattactttcg |
6499 |
T |
 |
Q |
305 |
aggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttc |
404 |
Q |
|
|
||||| ||||||||||| |||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||| |
|
|
T |
6500 |
aggttctgtccctacattaatgttgaggatgctatgatttcgaagtgtgtgaagtttgagagtgggcttaggccggatatctatcagtacatgtgtgttc |
6599 |
T |
 |
Q |
405 |
aggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
| ||||||||||||||||||||||| ||||| |||||||||||||||||||||| |
|
|
T |
6600 |
aagagatccgagactttgatactttagtgcataagtgtcgtatgtttgatgatg |
6653 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 327; Significance: 0; HSPs: 8)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 8 - 458
Target Start/End: Complemental strand, 20929001 - 20928551
Alignment:
Q |
8 |
gcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgaggaag |
107 |
Q |
|
|
||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||| |
|
|
T |
20929001 |
gcacagacttgggtgtagggaatggaacggattttccgagctatggttacgggagatgaccagaaggtcagactggcgactcataagttgactgaggaag |
20928902 |
T |
 |
Q |
108 |
cagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtatttccc |
207 |
Q |
|
|
||||| | |||||||||||||||||||| ||||||||| ||| || || ||||||||||||||| |||||||||||||||||||| |||||||||||||| |
|
|
T |
20928901 |
cagagcattggtggaccaatgccaagggaaggcttgagatgggagatgatgtggtgacctgggctaagttcaaggttgaattcttaaggaagtatttccc |
20928802 |
T |
 |
Q |
208 |
ggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcgagg |
307 |
Q |
|
|
|||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||| ||||| ||||||||||||||||| ||||| ||||| ||| |
|
|
T |
20928801 |
cgaagacttgaggaccaagaaggagattgagtttctgaatctgaagaaaggaatcatgtctgtagccgagtatgcggcgaagttcgaggaactttcaagg |
20928702 |
T |
 |
Q |
308 |
ttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttcagg |
407 |
Q |
|
|
||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |
|
|
T |
20928701 |
ttttgtccctacatcaatgctcaggatgctatgatttcgaagtgtgtgaagtttgagagtgggcttaggccggatatctatcagtacatgtgtgttcagg |
20928602 |
T |
 |
Q |
408 |
agatccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
|||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
T |
20928601 |
agatccgagactttgatactttggtgcataagtgtcgtatgtttgatgatg |
20928551 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 9 - 458
Target Start/End: Complemental strand, 20528999 - 20528550
Alignment:
Q |
9 |
cacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgaggaagc |
108 |
Q |
|
|
||||||||||||||||| | |||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||| |
|
|
T |
20528999 |
cacagacttgggtgcagaggatggagcggattttccaagctatggttacggaagatgaccagaaggttagactagcgactcatatgttgactgaggaagc |
20528900 |
T |
 |
Q |
109 |
agagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtatttcccg |
208 |
Q |
|
|
|||| |||||||||| |||||||| || ||||||||| ||| || || ||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
T |
20528899 |
agagcactggtggactaatgccaaaggaaggcttgagatgggagatgatgtggtgacctgggctaagttcaaggttgaattcttgaggaagtatttcccc |
20528800 |
T |
 |
Q |
209 |
gaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcgaggt |
308 |
Q |
|
|
||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||| |||| ||||||||||||||||| ||||| |||||||||| |
|
|
T |
20528799 |
gaagacttgaggaccaagaaggacattgagtttctgaatctgaagtaaggaatcatgtctatagccgagtatgcggcgaagttcgaggaactttcgaggt |
20528700 |
T |
 |
Q |
309 |
tttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttcagga |
408 |
Q |
|
|
||| |||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||| ||||| || ||||||||||| |
|
|
T |
20528699 |
tttttccctacatcaatgttgaggatgctatgatttcgaagtgtgtgaagtttgagagtgggcttaggccggagatctaccagtacatatgtgttcagga |
20528600 |
T |
 |
Q |
409 |
gatccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
||||||||||||||||||||||||| | |||| ||||||||||||||||| |
|
|
T |
20528599 |
gatccgagactttgatactttggtgaataagtatcgtatgtttgatgatg |
20528550 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 29 - 458
Target Start/End: Original strand, 20827825 - 20828254
Alignment:
Q |
29 |
atggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgaggaagcagagtactggtggaccaatg |
128 |
Q |
|
|
|||||| |||| || || |||||||| || | ||||| |||||||| || | || ||||| ||| | |||||||| || ||||| ||||||||||||| |
|
|
T |
20827825 |
atggagaggatctttcgtgctatggtgactagtgatgatcagaaggtgaggttggctactcacatgcttgctgaggaggctgagtattggtggaccaatg |
20827924 |
T |
 |
Q |
129 |
ccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtatttcccggaagacttgaggaccaagaa |
228 |
Q |
|
|
| ||||| || |||||| | | || | || ||||| ||| | | |||||||| ||| || ||||||||||| || || || || |||||||| | ||| |
|
|
T |
20827925 |
ctaagggaagacttgagattggtggagaggttgtgacttggacaaggttcaaggctgagtttttgaggaagtactttccagaggatttgaggactaggaa |
20828024 |
T |
 |
Q |
229 |
ggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcgaggttttgtccctacatcaatgct |
328 |
Q |
|
|
||| || ||||| |||||| |||| ||||||| ||||| || || ||||||||||||||||||||||||||| | ||||||||||||||||||||||| |
|
|
T |
20828025 |
ggaagtggagttcctgaatttgaagcaagggagtatgtctgtggccgagtatgcggcgaagtttgaggagcttgcaaggttttgtccctacatcaatgcg |
20828124 |
T |
 |
Q |
329 |
gaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttcaggagatccgagactttgatactt |
428 |
Q |
|
|
||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
T |
20828125 |
gaggatgctatggtttccaagtgtgtgaagtttgaaagtgggcttaggccggacatctatcagtacatgtgtgttcaggagatccgagactttgatactt |
20828224 |
T |
 |
Q |
429 |
tggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
||||||| |||||||||||||||||||||| |
|
|
T |
20828225 |
tggtgcataagtgtcgtatgtttgatgatg |
20828254 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 5 - 458
Target Start/End: Original strand, 22128847 - 22129301
Alignment:
Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
|
|
||||| ||||| |||||||| || |||||| |||| || ||| ||||||| || | ||||| || |||||||| | || ||||||||| | ||||||| |
|
|
T |
22128847 |
ggagctcagacgtgggtgcaaggcatggagaggatctttcgaactatggtgactagtgatgatcaaaaggtcaggttggctactcatatgattgctgagg |
22128946 |
T |
 |
Q |
105 |
aagcagagtactggtggaccaatgccaagggcag-gcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtatt |
203 |
Q |
|
|
| || ||||| |||||||| ||||| |||| | ||||||| | | | | || ||||| ||||| |||||||| | ||| || ||||||||||| | |
|
|
T |
22128947 |
aggccgagtattggtggactaatgctaaggcaaaagcttgagattggtgaagaggttgtgacttgggctaagttcaaagctgagtttttgaggaagtact |
22129046 |
T |
 |
Q |
204 |
tcccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttc |
303 |
Q |
|
|
| || || || |||||||| | |||||| || ||||| |||| |||| ||||||| |||||| || | |||||||||||||||||||||||||||| | |
|
|
T |
22129047 |
ttccagaggatttgaggactaggaaggaagtggagttcttgaacttgaagcaagggagcatgtccgtggttgagtatgcggcgaagtttgaggagcttgc |
22129146 |
T |
 |
Q |
304 |
gaggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgtt |
403 |
Q |
|
|
||||||||| | |||||||||||||||||||| ||||||||||||||| |||| ||||| ||||||||||||||||| ||||||||||||||||||||| |
|
|
T |
22129147 |
aaggttttgttcgtacatcaatgctgaggatgcgatggtttcgaagtgtgtgaaatttgaaagtgggcttaggccggatatctatcagtatatgtgtgtt |
22129246 |
T |
 |
Q |
404 |
caggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |
|
|
T |
22129247 |
taggagatcctagactttgatactttggtgcataagtgtcgtatgtttgatgatg |
22129301 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 5 - 456
Target Start/End: Original strand, 41214270 - 41214721
Alignment:
Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
|
|
||||| ||||| | |||||| ||||||||| |||| ||||| |||||||| || | ||||| ||||||||||| | || || || ||| | ||||||| |
|
|
T |
41214270 |
ggagctcagacataggtgcaaggaatggagaggatcttccgtgctatggtgactagtgatgatcagaaggtcaggttggctacccacatgcttgctgagg |
41214369 |
T |
 |
Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
|
|
| || ||||| |||| ||| ||||| ||||| || || ||| | | || | || ||||| ||||| | ||||||| ||| || |||||||||| || |
|
|
T |
41214370 |
aggctgagtattggtagacgaatgctaaggggagactcgagatcggtggagaggttgtgacttgggcaaggttcaagactgagtttttgaggaagtcctt |
41214469 |
T |
 |
Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcg |
304 |
Q |
|
|
|| || || |||||||| | ||||| || ||||| |||| |||| ||||||| |||||| || ||||||||||| |||| |||||| ||||||| | |
|
|
T |
41214470 |
tcctgaggatttgaggactagaaaggaagtggagttcttgaacttgaagcaagggagcatgtctgtggctgagtatgctgcgatgtttgaagagcttttg |
41214569 |
T |
 |
Q |
305 |
aggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttc |
404 |
Q |
|
|
||||||||||| || || |||||||| |||| ||||||||||||||| ||||||| || |||||||| |||| ||| |||||||||||||||||||||| |
|
|
T |
41214570 |
aggttttgtccgtatattaatgctgaagatgggatggtttcgaagtgtgtgaagttcgaaagtgggctcaggctggatatctatcagtatatgtgtgttc |
41214669 |
T |
 |
Q |
405 |
aggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatga |
456 |
Q |
|
|
||||||||||||||||||||||||||||||| |||||||| ||||||||||| |
|
|
T |
41214670 |
aggagatccgagactttgatactttggtgcataagtgtcgcatgtttgatga |
41214721 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 348 - 458
Target Start/End: Original strand, 23312571 - 23312681
Alignment:
Q |
348 |
agtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttcaggagatccgagactttgatactttggtgcacaagtgtcgtat |
447 |
Q |
|
|
||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| |
|
|
T |
23312571 |
agtgtgtgaagtttgaaagtgggcttaggccggatatctatcagtatatgtgtgttcatgagatccgagattttgatactttggtgcataagtgtcgtat |
23312670 |
T |
 |
Q |
448 |
gtttgatgatg |
458 |
Q |
|
|
||||||||||| |
|
|
T |
23312671 |
gtttgatgatg |
23312681 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 262 - 443
Target Start/End: Complemental strand, 20172824 - 20172643
Alignment:
Q |
262 |
catgtcggtagctgagtatgcggcgaagtttgaggagctttcgaggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagttt |
361 |
Q |
|
|
|||||| || || |||||||| || |||||||||||| | || |||||||||||| ||||||| ||||||||||||||| || |||||| ||||| || |
|
|
T |
20172824 |
catgtctgttgcggagtatgccgccaagtttgaggagatatcctggttttgtcccttcatcaatattgaggatgctatggtgtctaagtgtgtgaaggtt |
20172725 |
T |
 |
Q |
362 |
gagagtgggcttaggccggacatctatcagtatatgtgtgttcaggagatccgagactttgatactttggtgcacaagtgtc |
443 |
Q |
|
|
|||||||| || || || || || ||||||| || || |||| |||||| |||| |||||||||||| |||||||||||| |
|
|
T |
20172724 |
gagagtggtctgagtcccgagattcatcagtacatctgctttcatgagatctgagattttgatactttgatgcacaagtgtc |
20172643 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 458
Target Start/End: Original strand, 21200280 - 21200433
Alignment:
Q |
305 |
aggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttc |
404 |
Q |
|
|
||||||||||||||||||||||| |||||| ||||||| || || || |||||||||||| | | || || || || |||| ||| || ||| ||| |
|
|
T |
21200280 |
aggttttgtccctacatcaatgcggaggatactatggtatcaaaatgcgtgaagtttgagaacgatttgagacccgagatttatccgtacatctgttttc |
21200379 |
T |
 |
Q |
405 |
aggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
| |||||| | || |||||||| |||||||||||||| || ||||||||||||| |
|
|
T |
21200380 |
atgagatcagggattttgatacattggtgcacaagtgccgcatgtttgatgatg |
21200433 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0467 (Bit Score: 326; Significance: 0; HSPs: 2)
Name: scaffold0467
Description:
Target: scaffold0467; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 5 - 458
Target Start/End: Original strand, 12671 - 13124
Alignment:
Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
|
|
||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |
|
|
T |
12671 |
ggagcacagacttgggtctaggggatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactggcgactcatatgctagctgagg |
12770 |
T |
 |
Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
|
|
|||||||| |||||||| | |||||||| || || |||||| ||| ||||| |||||||| |||||| |||||||||||||||||||||||||||||||| |
|
|
T |
12771 |
aagcagagcactggtgggctaatgccaaaggaagacttgagatgggaggtgatgtggtgaactgggctaagttcaaggttgaattcttgaggaagtattt |
12870 |
T |
 |
Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcg |
304 |
Q |
|
|
||| ||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||| ||||| |||||||||||||||||||||||||||||| |
|
|
T |
12871 |
ccctgaagacttgaggaccaagaaggaaattgagtttctgaatctgaaacaaggaaacatgtctgtagccgagtatgcggcgaagtttgaggagctttcg |
12970 |
T |
 |
Q |
305 |
aggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttc |
404 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||| ||||||| ||||||||| |
|
|
T |
12971 |
aggttttgtccctacatcaatgctgaggatgctatggtttcgaaatgtgtgaagtttgagagtgggcttaggccggatatcaatcagtacatgtgtgttt |
13070 |
T |
 |
Q |
405 |
aggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
||||||||||||| |||||||||||||| || |||||||||||||||||||||| |
|
|
T |
13071 |
aggagatccgagattttgatactttggttcataagtgtcgtatgtttgatgatg |
13124 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0467; HSP #2
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 45 - 458
Target Start/End: Original strand, 1 - 414
Alignment:
Q |
45 |
gagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgaggaagcagagtactggtggaccaatgccaagggcaggcttga |
144 |
Q |
|
|
||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||| | |||||||| || || ||||| |
|
|
T |
1 |
gagctatggttacgggagatgaccagaaggtcagactggcgactcatatgctagctgaggaagcagagcactggtgggctaatgccaaaggaagacttga |
100 |
T |
 |
Q |
145 |
gttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtatttcccggaagacttgaggaccaagaaggaggttgagtttctg |
244 |
Q |
|
|
| ||| ||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |
|
|
T |
101 |
gatgggaggtgatgtggtgaactgggctaagttcaaggttgaattcttgaggaagtatttccctgaagacttgaggaccaagaaggaaattgagtttctg |
200 |
T |
 |
Q |
245 |
aatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcgaggttttgtccctacatcaatgctgaggatgctatggttt |
344 |
Q |
|
|
|||||||||||||| | |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
201 |
aatctgaaacaaggaaacatgtctgtagccgagtatgcggcgaagtttgaggagctttcgaggttttgtccctacatcaatgctgaggatgctatggttt |
300 |
T |
 |
Q |
345 |
cgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttcaggagatccgagactttgatactttggtgcacaagtgtcg |
444 |
Q |
|
|
|||| ||| |||||||||||||||||||||||||||| ||| ||||||| ||||||||| ||||||||||||| |||||||||||||| || |||||||| |
|
|
T |
301 |
cgaaatgtgtgaagtttgagagtgggcttaggccggatatcaatcagtacatgtgtgtttaggagatccgagattttgatactttggttcataagtgtcg |
400 |
T |
 |
Q |
445 |
tatgtttgatgatg |
458 |
Q |
|
|
|||||||||||||| |
|
|
T |
401 |
tatgtttgatgatg |
414 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 323; Significance: 0; HSPs: 12)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 8 - 458
Target Start/End: Original strand, 15943174 - 15943624
Alignment:
Q |
8 |
gcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgaggaag |
107 |
Q |
|
|
||||||||||||||||| || ||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||| |||||||||||||| ||||||||| |
|
|
T |
15943174 |
gcacagacttgggtgcaagggatggagcagattttccgagctatggttacaggagatgaccaaaaggttagactggcgactcatatgttgactgaggaag |
15943273 |
T |
 |
Q |
108 |
cagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtatttccc |
207 |
Q |
|
|
| ||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||| |
|
|
T |
15943274 |
cggagcactggtggaccaatgccaagggaaggcttgagttggaaggtgatgtggtgacctgggctaagttcaaggttgaattcttaaggaagtatttccc |
15943373 |
T |
 |
Q |
208 |
ggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcgagg |
307 |
Q |
|
|
||||||||||||||||||||| ||| |||||||||||||||| || ||||| ||| |||| || || ||||||||||||||||| ||||| ||||||||| |
|
|
T |
15943374 |
ggaagacttgaggaccaagaatgagattgagtttctgaatctaaagcaaggaatcttgtcagtggccgagtatgcggcgaagttcgaggaactttcgagg |
15943473 |
T |
 |
Q |
308 |
ttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttcagg |
407 |
Q |
|
|
||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |
|
|
T |
15943474 |
ttttgtccctacatcaatgctgaggatgctatgatttcgaagtgcgtgaagtttgagagtgggcttaggccggatatctatcagtacatgtgtgttcagg |
15943573 |
T |
 |
Q |
408 |
agatccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
|||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
T |
15943574 |
agatccgagactttgatactttggtgcataagtgtcgtatgtttgatgatg |
15943624 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 5 - 459
Target Start/End: Original strand, 6149429 - 6149883
Alignment:
Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
|
|
|||||||| |||||||||||||| |||||||||||||||||||||||||| || |||| ||||||||||||||| ||||||||||||||| | ||||||| |
|
|
T |
6149429 |
ggagcacaaacttgggtgcagggtatggagcggattttccgagctatggtgacaggaggtgaccagaaggtcaggctagcgactcatatgcttgctgagg |
6149528 |
T |
 |
Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
|
|
|||||||| |||||||||| |||||||| || || |||||| ||| ||||| ||||||||||||||| ||||| |||||||||||||||||||||||||| |
|
|
T |
6149529 |
aagcagagcactggtggactaatgccaaaggaagacttgagatgggaggtgatgtggtgacctgggcgaagtttaaggttgaattcttgaggaagtattt |
6149628 |
T |
 |
Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcg |
304 |
Q |
|
|
||| |||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||| || || ||||||||||||||||||||||| |||||| |
|
|
T |
6149629 |
ccctgaagacttgaggaccaagaaggagattgagtttctgaatctgaaacaaggaagcatgtctgtggccgagtatgcggcgaagtttgaggaactttcg |
6149728 |
T |
 |
Q |
305 |
aggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttc |
404 |
Q |
|
|
|||||||| ||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||| | ||||||||||| |||||||||| |
|
|
T |
6149729 |
aggttttgcccctacatcaatgctgaggatgctatggttttgaagtatgtgaagtttgagagtgggcttaggccgaatatctatcagtacatgtgtgttc |
6149828 |
T |
 |
Q |
405 |
aggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatgt |
459 |
Q |
|
|
||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |
|
|
T |
6149829 |
aggagatccgagactttgatactttggtgcattagtgttgtatgtttgatgatgt |
6149883 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 13 - 458
Target Start/End: Complemental strand, 17202192 - 17201747
Alignment:
Q |
13 |
gacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgaggaagcagag |
112 |
Q |
|
|
||||||||||||||| |||||| |||| || || |||||||| ||| | ||||| |||||||| || | || ||||| ||| | |||||||| || ||| |
|
|
T |
17202192 |
gacttgggtgcagggcatggagaggatatttcgtgctatggtgacgagtgatgaacagaaggtgaggttggctactcacatgcttgctgaggaggccgag |
17202093 |
T |
 |
Q |
113 |
tactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtatttcccggaag |
212 |
Q |
|
|
|| | |||||| ||||| ||||| || |||||| | | || | || ||||| ||||| |||||||| | ||| ||||||||||||||||| || |||| |
|
|
T |
17202092 |
tattagtggactaatgctaagggaagacttgagattggtggagaagttgtgacttgggcaaagttcaaagctgagttcttgaggaagtattttcctgaag |
17201993 |
T |
 |
Q |
213 |
acttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcgaggttttg |
312 |
Q |
|
|
| |||||||||| |||||| || ||||| ||||| |||| ||||||| |||||| |||||| ||||| |||||||||||||||||||| ||||||||| |
|
|
T |
17201992 |
atttgaggaccaggaaggaagtggagttcctgaacttgaagcaagggagcatgtccatagctgtgtatgtggcgaagtttgaggagcttttgaggttttg |
17201893 |
T |
 |
Q |
313 |
tccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttcaggagatc |
412 |
Q |
|
|
||| |||||||||||||||||||| |||||||| |||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||| |
|
|
T |
17201892 |
tccgtacatcaatgctgaggatgcgatggtttccaagtgtgtgaagtttgaaagtgggcttaggccggatatctatcagtatatgtgtgtttaggagatc |
17201793 |
T |
 |
Q |
413 |
cgagactttgatactttggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
| ||| ||||||||||||||||| |||||||||||||||||||||| |
|
|
T |
17201792 |
ctagattttgatactttggtgcataagtgtcgtatgtttgatgatg |
17201747 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 100 - 458
Target Start/End: Original strand, 13964026 - 13964384
Alignment:
Q |
100 |
tgaggaagcagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaag |
199 |
Q |
|
|
|||||| || ||||| |||||||||||||| ||||| || |||||| | || || | || ||||| ||| | | |||||| | ||| || ||||||||| |
|
|
T |
13964026 |
tgaggaggctgagtattggtggaccaatgctaagggaagacttgagattgatggagaggttgtgacttggacaaggttcaaagctgagtttttgaggaag |
13964125 |
T |
 |
Q |
200 |
tatttcccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagc |
299 |
Q |
|
|
|| || || || || |||||||| | |||||| || ||||| |||||| |||| ||||||| ||||| || || ||||||||||||||||||||||||| |
|
|
T |
13964126 |
tactttccagaggatttgaggactaggaaggaagtggagttcctgaatttgaagcaagggagtatgtccgtggccgagtatgcggcgaagtttgaggagc |
13964225 |
T |
 |
Q |
300 |
tttcgaggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtg |
399 |
Q |
|
|
|| | ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
T |
13964226 |
ttgcaaggttttgtccctacatcaatgctgaggatgctatggtttccaagtgtgtgaagtttgagagtgggcttaggccggacatctatcagtacatgtg |
13964325 |
T |
 |
Q |
400 |
tgttcaggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
T |
13964326 |
tgttcaggagatccgagactttgatactttggtgcataagtgtcgtatgtttgatgatg |
13964384 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 29 - 458
Target Start/End: Complemental strand, 30150897 - 30150468
Alignment:
Q |
29 |
atggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgaggaagcagagtactggtggaccaatg |
128 |
Q |
|
|
|||||| |||| || || |||||||| || | ||||| |||||||| || | || ||||| ||| | |||||||| || ||||| ||||||||||||| |
|
|
T |
30150897 |
atggagaggatctttcgtgctatggtgactagtgatgatcagaaggtgaggttggctactcacatgcttgctgaggaggctgagtattggtggaccaatg |
30150798 |
T |
 |
Q |
129 |
ccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtatttcccggaagacttgaggaccaagaa |
228 |
Q |
|
|
| ||||| || |||||| | | || | || ||||| ||| | | |||||||| ||| || ||||||||||| || || || || |||||||| | ||| |
|
|
T |
30150797 |
ctaagggaagacttgagattggtggagaggttgtgacttggacaaggttcaaggctgagtttttgaggaagtactttccagaggatttgaggactaggaa |
30150698 |
T |
 |
Q |
229 |
ggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcgaggttttgtccctacatcaatgct |
328 |
Q |
|
|
||| || ||||| |||||| |||| ||||||| ||||| || || ||||||||||||||||||||||||||| | ||||||||||||||||||||||| |
|
|
T |
30150697 |
ggaagtggagttcctgaatttgaagcaagggagtatgtctgtggccgagtatgcggcgaagtttgaggagcttgcaaggttttgtccctacatcaatgcg |
30150598 |
T |
 |
Q |
329 |
gaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttcaggagatccgagactttgatactt |
428 |
Q |
|
|
||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
T |
30150597 |
gaggatgctatggtttccaagtgtgtgaagtttgaaagtgggcttaggccggacatctatcagtacatgtgtgttcaggagatccgagactttgatactt |
30150498 |
T |
 |
Q |
429 |
tggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
||||||| |||||||||||||||||||||| |
|
|
T |
30150497 |
tggtgcataagtgtcgtatgtttgatgatg |
30150468 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 98 - 458
Target Start/End: Original strand, 8271068 - 8271428
Alignment:
Q |
98 |
gctgaggaagcagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgagga |
197 |
Q |
|
|
|||||||| || ||||| |||||||||||||| ||||| || |||||| | | || | || ||||| ||| | | |||||||| ||| || ||||||| |
|
|
T |
8271068 |
gctgaggaggctgagtattggtggaccaatgctaagggaagacttgagattggtggagaggttgtgacttggacaaggttcaaggctgagtttttgagga |
8271167 |
T |
 |
Q |
198 |
agtatttcccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgagga |
297 |
Q |
|
|
|||| || || || || |||||||| | |||||| || ||||| |||||| |||| ||||||| ||||| || || ||||||||||||||||||||||| |
|
|
T |
8271168 |
agtactttccagaggatttgaggactaggaaggaagtggagttcctgaatttgaagcaagggagtatgtccgtggccgagtatgcggcgaagtttgagga |
8271267 |
T |
 |
Q |
298 |
gctttcgaggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatg |
397 |
Q |
|
|
|||| | ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||| ||| |
|
|
T |
8271268 |
gcttgcaaggttttgtccctacatcaatgctgaggatgctatggtttcaaagtgtgtgaagtttgaaagtgggcttaggccggacatctatcagtacatg |
8271367 |
T |
 |
Q |
398 |
tgtgttcaggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |
|
|
T |
8271368 |
tgtgttcaggagatccgagactttgatactttggtgaataagtgtcgtatgtttgatgatg |
8271428 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 5 - 361
Target Start/End: Complemental strand, 25768779 - 25768423
Alignment:
Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
|
|
||||| || |||||||||||||| || ||| |||| ||||| |||||||| ||| | |||||||| ||||||||| | |||||||||||| | ||||||| |
|
|
T |
25768779 |
ggagctcatacttgggtgcagggcatagagaggatattccgtgctatggtgacgagtgatgaccaaaaggtcagattggcgactcatatgcttgctgagg |
25768680 |
T |
 |
Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
|
|
| || || | |||||||| |||||||| || || |||||||||| ||| | || ||||||||||| |||||||| | ||| ||||||||||||||||| |
|
|
T |
25768679 |
aggccgaacattggtggactaatgccaaaggaagacttgagttgggaggagaagttgtgacctgggcgaagttcaaagctgagttcttgaggaagtattt |
25768580 |
T |
 |
Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcg |
304 |
Q |
|
|
||| ||||| |||||||||| ||||||||||||||||||||| |||||||||| | ||| || |||||| |||||| | ||||||||||||||||| |
|
|
T |
25768579 |
ccctgaagatttgaggaccaggaaggaggttgagtttctgaacttgaaacaaggaagcatatctgtagctacgtatgcagaaaagtttgaggagctttca |
25768480 |
T |
 |
Q |
305 |
aggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagttt |
361 |
Q |
|
|
||||||||||| |||||||||||||| |||||||||||||| |||||| |||||||| |
|
|
T |
25768479 |
aggttttgtccgtacatcaatgctgaagatgctatggtttcaaagtgtgtgaagttt |
25768423 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 62 - 458
Target Start/End: Original strand, 22149379 - 22149775
Alignment:
Q |
62 |
gatgaccagaaggtcagactagcgactcatatgttagctgaggaagcagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtgg |
161 |
Q |
|
|
|||||||||||||| || | || ||||||||| | |||||||| |||||||| | |||||| |||||||| || || |||||| |||| || | |||| |
|
|
T |
22149379 |
gatgaccagaaggttaggttggctactcatatgcttgctgaggaggcagagtattagtggactaatgccaaaggaagacttgagatggagggggaggtgg |
22149478 |
T |
 |
Q |
162 |
tgacctgggccaagttcaaggttgaattcttgaggaagtatttcccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggat |
261 |
Q |
|
|
|||| ||||| | |||||||| || ||||||||||||||||| ||||||| |||||||| | ||||| ||| || || | || |||| ||||| | |
|
|
T |
22149479 |
tgacttgggcaaggttcaaggccgagttcttgaggaagtatttttcggaagatttgaggacaaggaaggtggtagaattcttaaacttgaagcaaggaag |
22149578 |
T |
 |
Q |
262 |
catgtcggtagctgagtatgcggcgaagtttgaggagctttcgaggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagttt |
361 |
Q |
|
|
||||| || || |||||||||||||||||||| ||| || | |||||||||| |||||||||| ||| |||| ||||| || |||||| |||||||| |
|
|
T |
22149579 |
tatgtctgtggccgagtatgcggcgaagtttgaagagtttgcaaggttttgtctgtacatcaatgtcgagaatgcaatggtgtccaagtgtgtgaagttt |
22149678 |
T |
 |
Q |
362 |
gagagtgggcttaggccggacatctatcagtatatgtgtgttcaggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
|||||||||||| ||| || |||||||||| |||||||| || |||||||| || ||||| ||||||||||||||||||| |||||||||||||| |
|
|
T |
22149679 |
gagagtgggctttggctagatgtctatcagtacatgtgtgtgcaagagatccgtgattttgacactttggtgcacaagtgtcatatgtttgatgatg |
22149775 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 11 - 455
Target Start/End: Original strand, 17321176 - 17321620
Alignment:
Q |
11 |
cagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgaggaagcag |
110 |
Q |
|
|
||||| |||||||| || |||||| |||| ||||| |||||||| || | ||||| ||||||||||| | || | || ||| | ||| |||| || | |
|
|
T |
17321176 |
cagacatgggtgcaaggcatggagaggatcttccgtgctatggtgactagtgatgatcagaaggtcaggttggctaaccacatgcttgctaaggaggctg |
17321275 |
T |
 |
Q |
111 |
agtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtatttcccgga |
210 |
Q |
|
|
|||| |||||||| ||||| ||||| || || ||| | | || | || ||||| ||||| | |||||||||||| || ||||||||||| || || || |
|
|
T |
17321276 |
agtattggtggacgaatgctaaggggagactcgagataggtggagaggttgtgacttgggcaaggttcaaggttgagtttttgaggaagtactttccaga |
17321375 |
T |
 |
Q |
211 |
agacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcgaggttt |
310 |
Q |
|
|
|| ||||| || | ||||| || ||||| |||| || | |||||| |||||| || ||||||||||| || |||||||| ||||||||||||||| |
|
|
T |
17321376 |
ggatttgagaactagaaaggaagtggagttcttgaacttgcagtaagggagcatgtccgtggctgagtatgcagcaaagtttgaagagctttcgaggttt |
17321475 |
T |
 |
Q |
311 |
tgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttcaggaga |
410 |
Q |
|
|
| | ||||| |||| ||||||||| ||||| || |||||| |||| ||||| ||||| ||||||||||| |||||||||||||||||||||||||||| |
|
|
T |
17321476 |
ttctcgtacattaatgttgaggatgcgatggtgtccaagtgtgtgaaatttgaaagtggacttaggccggatatctatcagtatatgtgtgttcaggaga |
17321575 |
T |
 |
Q |
411 |
tccgagactttgatactttggtgcacaagtgtcgtatgtttgatg |
455 |
Q |
|
|
| ||||| |||||||| |||||||| ||||||||||||||||||| |
|
|
T |
17321576 |
ttcgagagtttgataccttggtgcataagtgtcgtatgtttgatg |
17321620 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 5225013 - 5224953
Alignment:
Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatg |
65 |
Q |
|
|
|||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||| |
|
|
T |
5225013 |
ggagcatagacttgggtgcaggggatggagcggattttccaagctatggttacgggagatg |
5224953 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 369
Target Start/End: Complemental strand, 22260035 - 22259971
Alignment:
Q |
305 |
aggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgg |
369 |
Q |
|
|
||||||||||| || ||||||| ||| ||||||||||| || |||||| | |||||||||||||| |
|
|
T |
22260035 |
aggttttgtccttatatcaatgttgaagatgctatggtgtccaagtgtgttaagtttgagagtgg |
22259971 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 369
Target Start/End: Original strand, 22268464 - 22268528
Alignment:
Q |
305 |
aggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgg |
369 |
Q |
|
|
||||||||||| || ||||||| ||| ||||||||||| || |||||| | |||||||||||||| |
|
|
T |
22268464 |
aggttttgtccttatatcaatgttgaagatgctatggtgtccaagtgtgttaagtttgagagtgg |
22268528 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 320; Significance: 1e-180; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 8 - 459
Target Start/End: Complemental strand, 22281668 - 22281217
Alignment:
Q |
8 |
gcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgaggaag |
107 |
Q |
|
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |
|
|
T |
22281668 |
gcacagacttgggtgcaggggatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactggcgactcatatgttgactgaggaag |
22281569 |
T |
 |
Q |
108 |
cagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtatttccc |
207 |
Q |
|
|
||||| ||||||||||||||||||| || ||||||||| ||| ||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||| |
|
|
T |
22281568 |
cagagcactggtggaccaatgccaaaggaaggcttgagatgggaggtgatgtggtaacctgggctaagttcaaggttgaattcttgaggaagtatttccc |
22281469 |
T |
 |
Q |
208 |
ggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcgagg |
307 |
Q |
|
|
| ||||||||||||||||||||||| |||||||| |||||||||| |||| |||||||| |||| |||||||| |||||||| ||||| ||||||| | |
|
|
T |
22281468 |
gaaagacttgaggaccaagaaggagattgagtttttgaatctgaagtaaggaatcatgtctgtagtcgagtatgcagcgaagttcgaggaactttcgaag |
22281369 |
T |
 |
Q |
308 |
ttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttcagg |
407 |
Q |
|
|
||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| || |||||||| |||| |||||||| |
|
|
T |
22281368 |
ttttgtccctacatcaatgctgaggatgctatgatttcgaagtgtgtgaagtttgagagtgggcttaggccggatatttatcagtacatgtttgttcagg |
22281269 |
T |
 |
Q |
408 |
agatccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatgt |
459 |
Q |
|
|
|||||||||||||| ||||||||||||| ||||||||||||||||||||||| |
|
|
T |
22281268 |
agatccgagacttttatactttggtgcataagtgtcgtatgtttgatgatgt |
22281217 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 5 - 456
Target Start/End: Complemental strand, 25132026 - 25131574
Alignment:
Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
|
|
||||| ||||| |||||||| || |||||| |||| ||||| |||||||| || | ||||| ||||||||||| |||| || || ||| | ||||||| |
|
|
T |
25132026 |
ggagctcagacatgggtgcaaggcatggagaggatcttccgtgctatggtgactagtgatgatcagaaggtcaggttagctacccacatgcttgctgagg |
25131927 |
T |
 |
Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
|
|
| || ||||| |||||||| ||||| ||||| || || ||| | | || | || ||||| ||||| | ||||||| ||| || || |||||||| || |
|
|
T |
25131926 |
aggccgagtattggtggacaaatgctaaggggagactcgagatcggcggagaggttgtgacttgggcaaggttcaagactgagttttttaggaagtactt |
25131827 |
T |
 |
Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaa-gtttgaggagctttc |
303 |
Q |
|
|
| || || |||||||| | ||||| || ||||| | || |||| ||||||| ||||| || |||||||||||| | || ||||||||||||||| |
|
|
T |
25131826 |
tcaagaggatttgaggactagaaaggaagtagagttcttaaacttgaagcaagggagtatgtccgtggctgagtatgcgacaaaagtttgaggagctttc |
25131727 |
T |
 |
Q |
304 |
gaggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgtt |
403 |
Q |
|
|
|||||||||||| ||||| |||| ||||||||| ||||| || ||||| |||| ||||| ||||| ||||||||||| || |||||||||||||||||| |
|
|
T |
25131726 |
gaggttttgtccgtacattaatgttgaggatgcgatggtgtcacagtgtgtgaaatttgaaagtggacttaggccggatatttatcagtatatgtgtgtt |
25131627 |
T |
 |
Q |
404 |
caggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatga |
456 |
Q |
|
|
|||||||| ||||| |||||||| |||||||| |||||||||||||||||||| |
|
|
T |
25131626 |
caggagattcgagattttgataccttggtgcaaaagtgtcgtatgtttgatga |
25131574 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0218 (Bit Score: 318; Significance: 1e-179; HSPs: 1)
Name: scaffold0218
Description:
Target: scaffold0218; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 29 - 458
Target Start/End: Original strand, 315 - 744
Alignment:
Q |
29 |
atggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgaggaagcagagtactggtggaccaatg |
128 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||| ||||||||| ||| || ||||||||| ||||||| ||||||||| |||||||||| || | |
|
|
T |
315 |
atggagcggattttccgagctatggttacgggagatgactagaaggtcaaacttgcaactcatatgctagctgaagaagcagagcactggtggacaaacg |
414 |
T |
 |
Q |
129 |
ccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtatttcccggaagacttgaggaccaagaa |
228 |
Q |
|
|
|||| || ||||||||||||| ||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
415 |
ccaaaggaaggcttgagttgggaggtgatgtggtgacctgggctacgttcaaggttgaattcttgaggaagtatttcccggaagacttgaggaccaagaa |
514 |
T |
 |
Q |
229 |
ggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcgaggttttgtccctacatcaatgct |
328 |
Q |
|
|
|||| |||||||||| |||||||| ||||| |||||||||||||| ||||||||||||||||| ||||| |||||||||||||||| |||||||||||| |
|
|
T |
515 |
ggagattgagtttctaaatctgaagcaaggaatcatgtcggtagccgagtatgcggcgaagttcgaggaactttcgaggttttgtctctacatcaatgcg |
614 |
T |
 |
Q |
329 |
gaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttcaggagatccgagactttgatactt |
428 |
Q |
|
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
T |
615 |
gaggatgctatggtttcgaagtgtgtgaagtttgagagtgggcttaggccggatatctatcagtacatgtgtgttcaggagatccgagactttgatactt |
714 |
T |
 |
Q |
429 |
tggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
||||||| |||||||||||||||||||||| |
|
|
T |
715 |
tggtgcataagtgtcgtatgtttgatgatg |
744 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 318; Significance: 1e-179; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 5 - 458
Target Start/End: Complemental strand, 23509524 - 23509071
Alignment:
Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
|
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |
|
|
T |
23509524 |
ggagcacagacttgggtgcaggggatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactggcgactcatatgttgactgagg |
23509425 |
T |
 |
Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
|
|
|||||||| ||||||||||||||||||| || |||||| |||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
T |
23509424 |
aagcagagcactggtggaccaatgccaaaggaaggcttaagttgggaggtgatgtggtgacctgggctaagttcaaggttgaattcttgaggaagtattt |
23509325 |
T |
 |
Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcg |
304 |
Q |
|
|
||| |||||||||||||||||||||| | ||||||||||||||||||| ||||| |||||||| ||||| || ||| || |||||| ||||| |||| | |
|
|
T |
23509324 |
ccccgaagacttgaggaccaagaaggcgattgagtttctgaatctgaagcaaggaatcatgtctgtagccaagcatgtggtgaagttcgaggaacttttg |
23509225 |
T |
 |
Q |
305 |
aggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttc |
404 |
Q |
|
|
||||||||||| |||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||| |
|
|
T |
23509224 |
aggttttgtccatacatcaatgctaaggatgctatgatttcgaagtgtgcgaagtttgagagtgggcttaggccggatatctatcagtacatgtgtgttc |
23509125 |
T |
 |
Q |
405 |
aggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
|||||||||||||||||||||||||| |||| |||||||||||||||||||||| |
|
|
T |
23509124 |
aggagatccgagactttgatactttgatgcataagtgtcgtatgtttgatgatg |
23509071 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 5 - 458
Target Start/End: Complemental strand, 24585049 - 24584596
Alignment:
Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
|
|
||||| ||||| ||| |||| || |||||| |||| || || |||||||| || | ||||| |||||||| || | || ||||| ||| | ||||||| |
|
|
T |
24585049 |
ggagctcagacatggttgcaaggcatggagaggatctttcgtgctatggtgactagtgatgatcagaaggtgaggttggctactcagatgcttgctgagg |
24584950 |
T |
 |
Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
|
|
| || ||||| |||||||||||||| ||||| || |||||| | || || | || ||||| ||| | | |||||| ||| || ||||||||||| || |
|
|
T |
24584949 |
aggctgagtattggtggaccaatgctaagggaagacttgagattgatggagaggttgtgacttggacaatgttcaaaactgagtttttgaggaagtactt |
24584850 |
T |
 |
Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcg |
304 |
Q |
|
|
|| || || |||||||| | |||||| || ||||| |||||| |||| ||||||| ||||| || || |||||||||||||||||| |||||||| | |
|
|
T |
24584849 |
tccagaggatttgaggactaggaaggaagtggagttcctgaatttgaagcaagggagtatgtccgtggccgagtatgcggcgaagtttaaggagcttgca |
24584750 |
T |
 |
Q |
305 |
aggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttc |
404 |
Q |
|
|
|||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||| |||| ||||||||||| |||||||||| |
|
|
T |
24584749 |
aggttttgtccctacatcaatgttgaggatgctatggtttcgaagtgtgtgaagttggagagtgggcttaggtcggatatctatcagtacatgtgtgttc |
24584650 |
T |
 |
Q |
405 |
aggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |
|
|
T |
24584649 |
aggagatccgagagtttgatactttggtgcataagtgtcgtatgtttgatgatg |
24584596 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 5 - 459
Target Start/End: Complemental strand, 21828655 - 21828202
Alignment:
Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
|
|
||||| ||||| ||| |||| || |||||| |||| ||||| |||||||| || | ||||| ||||||||||| | || || || ||| | ||||||| |
|
|
T |
21828655 |
ggagctcagacatggctgcaaggcatggagaggatcttccgtgctatggtgactagtgatgatcagaaggtcaggttggctacccacatgcttgctgagg |
21828556 |
T |
 |
Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
|
|
|||| |||| |||||||| ||||| ||||| || |||||| | | || | || ||||| ||||| | ||||||| || || |||| ||| || || |
|
|
T |
21828555 |
aagctgagttttggtggactaatgctaaggggagacttgaggtcggtggagaggttgtgacttgggctaggttcaagaccgagtttttgatgaaatactt |
21828456 |
T |
 |
Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcg |
304 |
Q |
|
|
|| || || |||||||| | ||||| || ||||| |||| |||| |||||| ||||| || ||||||||||| || |||||||||||||||||| |
|
|
T |
21828455 |
tcctgaggatttgaggactagaaaggaagtggagttcttgaacttgaagtaagggagtatgtctgtcgctgagtatgcagcaaagtttgaggagctttcg |
21828356 |
T |
 |
Q |
305 |
aggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttc |
404 |
Q |
|
|
||||||||| | ||||| |||||||| ||||| ||||||||||||||| ||||||| || ||||||||||||||||| |||||||||||||||||||||| |
|
|
T |
21828355 |
aggttttgtacgtacattaatgctgaagatgcgatggtttcgaagtgtgtgaagttcgaaagtgggcttaggccggatatctatcagtatatgtgtgttc |
21828256 |
T |
 |
Q |
405 |
aggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatgt |
459 |
Q |
|
|
||||||| |||| || ||| |||||||||| ||||||||||||||||||||||| |
|
|
T |
21828255 |
aggagattagagatttcgat-ctttggtgcataagtgtcgtatgtttgatgatgt |
21828202 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 262 - 333
Target Start/End: Original strand, 33314011 - 33314082
Alignment:
Q |
262 |
catgtcggtagctgagtatgcggcgaagtttgaggagctttcgaggttttgtccctacatcaatgctgagga |
333 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||| |
|
|
T |
33314011 |
catgtcagtagctgagtatgcggcgaagtttgaggagctttcgaggttttgtccgtacattaatgcagagga |
33314082 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0022 (Bit Score: 317; Significance: 1e-179; HSPs: 1)
Name: scaffold0022
Description:
Target: scaffold0022; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 5 - 433
Target Start/End: Original strand, 7776 - 8204
Alignment:
Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
|
|
|||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |
|
|
T |
7776 |
ggagcacagacttgggtgtaggggatggagcggattttccgagctatggttacgggagatgaccagaaggtcaaactagcgactcatatgctagctgagg |
7875 |
T |
 |
Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
|
|
||||| || ||| ||||||||||||||| |||||||||||||||| ||||| || |||||||||||| | |||||||||||||||||||||||||||||| |
|
|
T |
7876 |
aagcatagcactagtggaccaatgccaaaggcaggcttgagttgggaggtgatgaggtgacctgggctatgttcaaggttgaattcttgaggaagtattt |
7975 |
T |
 |
Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcg |
304 |
Q |
|
|
|||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||| |||| | |
|
|
T |
7976 |
cccggaagacttgagggccaagaaggagatgaagtttctgaatctgaaacaagggatcatgtcggtagccgagtatgtggcgaagttcgaggaacttttg |
8075 |
T |
 |
Q |
305 |
aggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttc |
404 |
Q |
|
|
|||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||| |
|
|
T |
8076 |
aggttttgtccctacatcaatgctgaggatgctatgatttcgaagtgtgtgaagtttgagagtgcgcttaggccggacatctatcagtacatgtgtgttc |
8175 |
T |
 |
Q |
405 |
aggagatccgagactttgatactttggtg |
433 |
Q |
|
|
||||||||| ||||||||||| ||||||| |
|
|
T |
8176 |
aggagatcccagactttgatattttggtg |
8204 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0008 (Bit Score: 304; Significance: 1e-171; HSPs: 2)
Name: scaffold0008
Description:
Target: scaffold0008; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 8 - 458
Target Start/End: Original strand, 130829 - 131282
Alignment:
Q |
8 |
gcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgaggaag |
107 |
Q |
|
|
|||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||| ||||| ||||| |||||||||||||| ||||||||| |
|
|
T |
130829 |
gcacagacttgggtgcagggaatggagcggattttctgagctattgttacggaagatgaccaaaaggttagactggcgactcatatgttgactgaggaag |
130928 |
T |
 |
Q |
108 |
cagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtatttccc |
207 |
Q |
|
|
||||| ||| |||||||||||||||||| |||||||| |||| || || ||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
T |
130929 |
cagagcactagtggaccaatgccaagggaaggcttgaattgggagatgatgtggtgacctgggctaagttcaaggttgaattcttgaggaagtatttccc |
131028 |
T |
 |
Q |
208 |
ggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgagga---gctttcg |
304 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| || || ||||||||||||||||| ||||| |||||| |
|
|
T |
131029 |
tgaagacttgaggaccaagaaggaggttgagtttctgaatctgaagcaaggaatcatgtctgtggccgagtatgcggcgaagttcgaggaattactttcg |
131128 |
T |
 |
Q |
305 |
aggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttc |
404 |
Q |
|
|
||||| ||||||||||| |||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||| |
|
|
T |
131129 |
aggttctgtccctacattaatgttgaggatgctatgatttcgaagtgtgtgaagtttgagagtgggcttaggccggatatctatcagtacatgtgtgttc |
131228 |
T |
 |
Q |
405 |
aggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
| ||||||||||||||||||||||| ||||| |||||||||||||||||||||| |
|
|
T |
131229 |
aagagatccgagactttgatactttagtgcataagtgtcgtatgtttgatgatg |
131282 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0008; HSP #2
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 5 - 458
Target Start/End: Complemental strand, 27740 - 27287
Alignment:
Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
|
|
|||||||| |||||||||||||| |||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||| ||||| | ||||||| |
|
|
T |
27740 |
ggagcacaaacttgggtgcaggggatggagcggattttccgagctacggtcacgagagatgaccagaaggtcagactagcgacttatatgcttgctgagg |
27641 |
T |
 |
Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
|
|
||||| || |||||||||| |||||||| || || |||||| ||| ||||| ||||| ||||||||| |||||||| || ||||||||||||||||||| |
|
|
T |
27640 |
aagcaaagcactggtggactaatgccaaaggaagacttgagatgggaggtgatgtggggacctgggctaagttcaaagtcaaattcttgaggaagtattt |
27541 |
T |
 |
Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcg |
304 |
Q |
|
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||| |||||||||||||||||||||||||||||| |
|
|
T |
27540 |
ccctgaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaaggaagcatgtctgtagccgagtatgcggcgaagtttgaggagctttcg |
27441 |
T |
 |
Q |
305 |
aggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttc |
404 |
Q |
|
|
|||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||| |||||||| || |||||||||| |
|
|
T |
27440 |
aggttttgtccctatatcaatgctgaggatgctgtggtttcgaagtgtgtgaagtttgagagtggacttaggccggatatctatcaatacatgtgtgttc |
27341 |
T |
 |
Q |
405 |
aggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
|| |||||| ||||||| ||||||||||||| |||||||||||||||||||||| |
|
|
T |
27340 |
agtagatcctagacttttatactttggtgcataagtgtcgtatgtttgatgatg |
27287 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0120 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: scaffold0120
Description:
Target: scaffold0120; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 5 - 459
Target Start/End: Complemental strand, 26142 - 25689
Alignment:
Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
|
|
||||||||||||||||||||||| |||| | ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| | | ||||| |
|
|
T |
26142 |
ggagcacagacttgggtgcagggtatggggtggattttccgagctatggtgacaggagatgaccagaaggtcagactagcgactcatatgcttgttgagg |
26043 |
T |
 |
Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
|
|
|||||||| |||||||||| |||||||| || || |||||| ||| |||| ||||||||| ||||| |||||||| |||||||||||| |||||||||| |
|
|
T |
26042 |
aagcagagcactggtggactaatgccaaaggaagacttgagatgggaggtaatgtggtgacttgggctaagttcaaagttgaattcttg-ggaagtattt |
25944 |
T |
 |
Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcg |
304 |
Q |
|
|
||| ||||||||||| || ||||||||||||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||| || |||||||| |
|
|
T |
25943 |
ccctgaagacttgagaactaagaaggaggttgagtttctgaatctgaaacaaggaagcatgtttgtagccgagtatgcggcgaagtttaagaagctttcg |
25844 |
T |
 |
Q |
305 |
aggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttc |
404 |
Q |
|
|
||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
T |
25843 |
aggttttgtccttacatcaatgctgaagatgctatggtttcgaagtgtgtgaagtttgagagtgggcttaggccggatatctatcagtatatgtgtgttg |
25744 |
T |
 |
Q |
405 |
aggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatgt |
459 |
Q |
|
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
T |
25743 |
aggagatccgagactttgatactttggtgcataagtgtcgtatgtttgatgatgt |
25689 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0462 (Bit Score: 300; Significance: 1e-168; HSPs: 1)
Name: scaffold0462
Description:
Target: scaffold0462; HSP #1
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 5 - 457
Target Start/End: Complemental strand, 3675 - 3215
Alignment:
Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
|
|
|||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||| |
|
|
T |
3675 |
ggagcacaaacttgggtgcagggtatggagcggattttccgagctatggtgacgggagatgaccagaaggtcagactagcgactcatatgcttgctgagg |
3576 |
T |
 |
Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
|
|
|||||||| ||| |||||| |||||||| || || |||||| ||| ||||| ||||||||||||||| |||||||| | | |||| |||||||||||||| |
|
|
T |
3575 |
aagcagagaactagtggactaatgccaaaggaagacttgagatgggaggtgatgtggtgacctgggctaagttcaaagcttaattattgaggaagtattt |
3476 |
T |
 |
Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcg |
304 |
Q |
|
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||| |||||||||||||||||||||||||||||| |
|
|
T |
3475 |
ccctgaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaaggaagcatgtctgtagccgagtatgcggcgaagtttgaggagctttcg |
3376 |
T |
 |
Q |
305 |
aggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttc |
404 |
Q |
|
|
|||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| | | |
|
|
T |
3375 |
aggttttgtccctacatcaatgctgaagatgatatggtttcgaagtgtgtgaagtttgagagtgggcttaggccggatatctatcagtatatgtgtatcc |
3276 |
T |
 |
Q |
405 |
aggagatccgagact--------ttgatactttggtgcacaagtgtcgtatgtttgatgat |
457 |
Q |
|
|
| ||||||||||||| |||||||||||||||| |||||||||||||||| |||| |
|
|
T |
3275 |
aagagatccgagactttgagactttgatactttggtgcataagtgtcgtatgtttgttgat |
3215 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0615 (Bit Score: 287; Significance: 1e-161; HSPs: 1)
Name: scaffold0615
Description:
Target: scaffold0615; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 8 - 459
Target Start/End: Original strand, 8732 - 9175
Alignment:
Q |
8 |
gcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgaggaag |
107 |
Q |
|
|
|||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||| | |
|
|
T |
8732 |
gcacagacttggatgcagggtatggagcggattttccgagctatggttacggaagatgaccagaaggtcaggctagcgactcatatgttgactgaggagg |
8831 |
T |
 |
Q |
108 |
cagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtatttccc |
207 |
Q |
|
|
||||| |||||||||| | ||||| || || | |||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
T |
8832 |
cagagcactggtggactagcgccaaaggaagacatgagttgggaggtgatgtggtgacctgggctaagttcaaggttgaattcttgaggaagtatttccc |
8931 |
T |
 |
Q |
208 |
ggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcgagg |
307 |
Q |
|
|
||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||| ||||| |||||||||||||||||||||||||| || ||| |
|
|
T |
8932 |
tgaagacttgaggaccaataaggaggttgagtttctgaatctgaaacaaggaagcatgtctgtagccgagtatgcggcgaagtttgaggagctgtctagg |
9031 |
T |
 |
Q |
308 |
ttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttcagg |
407 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||| || ||||||||| ||| |
|
|
T |
9032 |
ttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtgtgaagtttgagagtggacttaggccggatatctatcaatacatgtgtgttaagg |
9131 |
T |
 |
Q |
408 |
agatccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatgt |
459 |
Q |
|
|
||||| ||| ||||||||||| ||||||||||||||||||||||| |
|
|
T |
9132 |
agatc--------tgagactttggtgcataagtgtcgtatgtttgatgatgt |
9175 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0673 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: scaffold0673
Description:
Target: scaffold0673; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 5 - 458
Target Start/End: Original strand, 4711 - 5163
Alignment:
Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
|
|
||||||| |||||||||||||| ||||| | ||||||| ||||| |||| || ||||||||||||||||||||||| |||||||| ||| | ||||||| |
|
|
T |
4711 |
ggagcacgaacttgggtgcagggcatggaacagattttctgagctgtggtcacaggagatgaccagaaggtcagactggcgactcaaatgcttgctgagg |
4810 |
T |
 |
Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
|
|
|||||||| ||| || ||| |||| ||| || ||| ||||| ||| ||||| ||||||||||||||| ||||||||||||||||||| |||||||||||| |
|
|
T |
4811 |
aagcagagcactagttgactaatgtcaaaggaagg-ttgagatgggaggtgatgtggtgacctgggctaagttcaaggttgaattctagaggaagtattt |
4909 |
T |
 |
Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcg |
304 |
Q |
|
|
||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | || ||||||||||||||||||||||| | |||| |
|
|
T |
4910 |
ccctgaagacttgaggaccaagaaggagattgagtttctgaatctgaaacaagggatcatgtctttcgccgagtatgcggcgaagtttgaggaaccttcg |
5009 |
T |
 |
Q |
305 |
aggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttc |
404 |
Q |
|
|
|||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||| |||||||| | |
|
|
T |
5010 |
aggttttgcccctacatcaatgctgaggatgctatggtttcgaagtgtgtgaagtttgagagtgggcttagaccggatatctatcagtacatgtgtgtcc |
5109 |
T |
 |
Q |
405 |
aggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
T |
5110 |
aggagatccgagactttgatactttggtgcataagtgtcgtatgtttgatgatg |
5163 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0610 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: scaffold0610
Description:
Target: scaffold0610; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 5 - 458
Target Start/End: Original strand, 3266 - 3719
Alignment:
Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
|
|
||||||||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||||||||||| ||| | |||||||||||| | |||||| |
|
|
T |
3266 |
ggagcacagacttgggtgcagggcatggagcggatattccatgctatggtgacgggagatgaccagaaggttagattggcgactcatatgcttactgagg |
3365 |
T |
 |
Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
|
|
|||| ||| |||||||||| ||||||||||| || ||||| ||| ||||| || |||||||||| |||||||| | ||||||||||||||||||||| |
|
|
T |
3366 |
aagcggagcactggtggactaatgccaagggaagacttgatatgggaggtgaagttgtgacctgggaaaagttcaaagctgaattcttgaggaagtattt |
3465 |
T |
 |
Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcg |
304 |
Q |
|
|
||| ||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||| |||| |||||||||||||||||||||||||||||| |
|
|
T |
3466 |
ccctgaagacttgaggaccaagaaggaggttgagtttttgaatctgaaacaaggaagcatgtctatagccgagtatgcggcgaagtttgaggagctttcg |
3565 |
T |
 |
Q |
305 |
aggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttc |
404 |
Q |
|
|
|||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||| |||||||||||||| || ||||||||||| |||||||| | |
|
|
T |
3566 |
aggttttgtccctacatcaatgctgaagatgttatggtttcgaagtgtgtgaagtttgatagtgggcttaggccagatatctatcagtacatgtgtgtcc |
3665 |
T |
 |
Q |
405 |
aggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
T |
3666 |
aggagatccgagactttgatactttggtgcataagtgtcgtatgtttgatgatg |
3719 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0009 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: scaffold0009
Description:
Target: scaffold0009; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 5 - 458
Target Start/End: Complemental strand, 97489 - 97038
Alignment:
Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
|
|
||||| ||||||||||| ||| | ||||||||||| ||||| |||||||| |||||||||||||||||||||||| | |||||||||||| | ||||||| |
|
|
T |
97489 |
ggagcccagacttgggtacagagcatggagcggatattccgtgctatggtgacgggagatgaccagaaggtcagattggcgactcatatgcttgctgagg |
97390 |
T |
 |
Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
|
|
|||| ||| | |||||||| |||||||| | || |||||||| | | | || ||||||||| | |||||||| | ||||||||||||||| ||||| |
|
|
T |
97389 |
aagctgagcagtggtggactaatgccaaaagaagacttgagtttggtgaagaagttgtgacctggacaaagttcaaagctgaattcttgaggaaatattt |
97290 |
T |
 |
Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcg |
304 |
Q |
|
|
||| ||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||| ||||| ||||||| |||||||||||||||||||||| |
|
|
T |
97289 |
ccctgaagacttgaggaccaagaaggaggttgagtttttgaatctgaaacaaggaagcatgtctgtagccgagtatgaggcgaagtttgaggagctttcg |
97190 |
T |
 |
Q |
305 |
aggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttc |
404 |
Q |
|
|
||||||||||| |||||||||| ||| |||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||| |
|
|
T |
97189 |
aggttttgtccgtacatcaatgttgaagatgttatggtttcgaagtgtgtgaagtttgagagtgggcttaggccggatatctatcagtatat--gtgttc |
97092 |
T |
 |
Q |
405 |
aggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
T |
97091 |
aggagatccgagactttgatactttggtgcataagtgtcgtatgtttgatgatg |
97038 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0021 (Bit Score: 239; Significance: 1e-132; HSPs: 4)
Name: scaffold0021
Description:
Target: scaffold0021; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 5 - 459
Target Start/End: Complemental strand, 9121 - 8667
Alignment:
Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
|
|
|||||||| || ||||||||||| | ||||||||| ||| | |||||||| ||||||| ||| |||||||||| ||| ||||||| |||| | | ||||| |
|
|
T |
9121 |
ggagcacaaacgtgggtgcagggcacggagcggatattcggtgctatggtgacgggaggtgatcagaaggtcaaactggcgactcgtatgcttgttgagg |
9022 |
T |
 |
Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
|
|
|||| ||| ||| ||||| |||||||| || || ||||| ||| |||| || ||||||||||| |||||||| | ||||||||||| ||||||||| |
|
|
T |
9021 |
aagctgagcactattggactaatgccaaaggaagaattgagatgggaggtaaagttgtgacctgggcgaagttcaaagctgaattcttgatgaagtattt |
8922 |
T |
 |
Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcg |
304 |
Q |
|
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||| |||||||||||||||||||||||||||||| |
|
|
T |
8921 |
ccctgaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaaggaagcatgtctgtagccgagtatgcggcgaagtttgaggagctttcg |
8822 |
T |
 |
Q |
305 |
aggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttc |
404 |
Q |
|
|
||||||| ||| |||||||||||| | ||||||||||||||||||||| | |||||||| ||||||||||||||| | || ||||||||| ||||||| | |
|
|
T |
8821 |
aggttttatccgtacatcaatgctaaagatgctatggtttcgaagtgtgtaaagtttgaaagtgggcttaggccgaatatttatcagtatttgtgtgtcc |
8722 |
T |
 |
Q |
405 |
aggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatgt |
459 |
Q |
|
|
|||||||||||||||||||||||||||| || ||||||||||||||||||||||| |
|
|
T |
8721 |
aggagatccgagactttgatactttggtacataagtgtcgtatgtttgatgatgt |
8667 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0021; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 151 - 458
Target Start/End: Complemental strand, 91320 - 91013
Alignment:
Q |
151 |
aggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtatttcccggaagacttgaggaccaagaaggaggttgagtttctgaatctg |
250 |
Q |
|
|
||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |
|
|
T |
91320 |
aggtgatgtggtgacctgggctaagttcaaggttgaattcttgaggaagtatttccctgaagacttgaggaccaagaaggagattgagtttctgaatctg |
91221 |
T |
 |
Q |
251 |
aaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcgaggttttgtccctacatcaatgctgaggatgctatggtttcgaagt |
350 |
Q |
|
|
||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |
|
|
T |
91220 |
aaacatgggatcatgtctgtagccgagtatgcggcgaagtttgaggagctttcgaggttttgtccctacatcaatgctgaggatgctaagatttcgaagt |
91121 |
T |
 |
Q |
351 |
gtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttcaggagatccgagactttgatactttggtgcacaagtgtcgtatgtt |
450 |
Q |
|
|
| ||||||||||||||||||||||| || | |||||||| || |||||||||||||||||| |||||||||| ||||||||||| |||||||||||||| |
|
|
T |
91120 |
atgtgaagtttgagagtgggcttaggacgaaaatctatcaataaatgtgtgttcaggagatcagagactttgaaactttggtgcataagtgtcgtatgtt |
91021 |
T |
 |
Q |
451 |
tgatgatg |
458 |
Q |
|
|
|||||||| |
|
|
T |
91020 |
tgatgatg |
91013 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0021; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 98 - 456
Target Start/End: Original strand, 20309 - 20667
Alignment:
Q |
98 |
gctgaggaagcagagtactggtggaccaatgccaagggcaggcttgag-ttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgagg |
196 |
Q |
|
|
|||||||| || ||||| |||||||| ||||| ||||| || |||||| |||| | | | |||||| | ||||| | |||||||| ||| || |||||| |
|
|
T |
20309 |
gctgaggaggccgagtattggtggactaatgctaagggaagacttgagattggtggatag-gtggtgccttgggctaggttcaaggctgagtttttgagg |
20407 |
T |
 |
Q |
197 |
aagtatttcccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgagg |
296 |
Q |
|
|
||||| || || || || |||||||| | |||||| || ||||| |||| |||| ||||||| ||||| || ||||||||||||||||||||||||| |
|
|
T |
20408 |
aagtactttccagaggatttgaggactaggaaggaagtggagttcttgaacttgaagcaagggagtatgtccgtggctgagtatgcggcgaagtttgagg |
20507 |
T |
 |
Q |
297 |
agctttcgaggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatat |
396 |
Q |
|
|
||||| |||||||||||| ||||| |||||| ||||||| |||||||| |||||| |||||||||| ||||||||||||||||| ||||| |||||||| |
|
|
T |
20508 |
agcttgtgaggttttgtccgtacattaatgctaaggatgcgatggtttccaagtgtgtgaagtttgaaagtgggcttaggccggatatctaccagtatat |
20607 |
T |
 |
Q |
397 |
gtgtgttcaggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatga |
456 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||| |
|
|
T |
20608 |
gtgtgttcaggagatccgagactttgatactttggtgcataggtgtcatatgtttgatga |
20667 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0021; HSP #4
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 98 - 456
Target Start/End: Original strand, 29885 - 30243
Alignment:
Q |
98 |
gctgaggaagcagagtactggtggaccaatgccaagggcaggcttgag-ttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgagg |
196 |
Q |
|
|
|||||||| || ||||| |||||||| ||||| ||||| || |||||| |||| | | | |||||| | ||||| | |||||||| ||| || |||||| |
|
|
T |
29885 |
gctgaggaggccgagtattggtggactaatgctaagggaagacttgagattggtggatag-gtggtgccttgggctaggttcaaggctgagtttttgagg |
29983 |
T |
 |
Q |
197 |
aagtatttcccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgagg |
296 |
Q |
|
|
||||| || || || || |||||||| | |||||| || ||||| |||| |||| ||||||| ||||| || ||||||||||||||||||||||||| |
|
|
T |
29984 |
aagtactttccagaggatttgaggactaggaaggaagtggagttcttgaacttgaagcaagggagtatgtccgtggctgagtatgcggcgaagtttgagg |
30083 |
T |
 |
Q |
297 |
agctttcgaggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatat |
396 |
Q |
|
|
||||| |||||||||||| ||||| |||||| ||||||| |||||||| |||||| |||||||||| ||||||||||||||||| ||||| |||||||| |
|
|
T |
30084 |
agcttgtgaggttttgtccgtacattaatgctaaggatgcgatggtttccaagtgtgtgaagtttgaaagtgggcttaggccggatatctaccagtatat |
30183 |
T |
 |
Q |
397 |
gtgtgttcaggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatga |
456 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||| |
|
|
T |
30184 |
gtgtgttcaggagatccgagactttgatactttggtgcataggtgtcatatgtttgatga |
30243 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0465 (Bit Score: 231; Significance: 1e-127; HSPs: 2)
Name: scaffold0465
Description:
Target: scaffold0465; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 164 - 458
Target Start/End: Original strand, 12124 - 12418
Alignment:
Q |
164 |
acctgggccaagttcaaggttgaattcttgaggaagtatttcccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatca |
263 |
Q |
|
|
|||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |
|
|
T |
12124 |
acctgggctaagttcaaggttgaattattgaggaagtatttccccgaagacttgaggaccaagaaggagattgagtttctgaatctgaaacaaggaatca |
12223 |
T |
 |
Q |
264 |
tgtcggtagctgagtatgcggcgaagtttgaggagctttcgaggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttga |
363 |
Q |
|
|
|||| ||||| ||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |
|
|
T |
12224 |
tgtctgtagccgagtatgcggcgaagttcgagcaactttcgaggttttgtccctacatcaatgctgaggatgctatgatttcgaagtgtgtgaagtttga |
12323 |
T |
 |
Q |
364 |
gagtgggcttaggccggacatctatcagtatatgtgtgttcaggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
T |
12324 |
gagtgggcttaggccagatatctatcagtacatgtgtgttcaggagatccgagactttgatactttggtgcataagtgtcgtatgtttgatgatg |
12418 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0465; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 5 - 127
Target Start/End: Original strand, 11999 - 12121
Alignment:
Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
|
|
||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |
|
|
T |
11999 |
ggagcacggacttgggtgcaggggatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactggcgactcatatgttgactgagg |
12098 |
T |
 |
Q |
105 |
aagcagagtactggtggaccaat |
127 |
Q |
|
|
|||||||| |||||||||||||| |
|
|
T |
12099 |
aagcagagcactggtggaccaat |
12121 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0124 (Bit Score: 178; Significance: 8e-96; HSPs: 1)
Name: scaffold0124
Description:
Target: scaffold0124; HSP #1
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 85 - 458
Target Start/End: Original strand, 4226 - 4599
Alignment:
Q |
85 |
gactcatatgttagctgaggaagcagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggtt |
184 |
Q |
|
|
|||||| ||| ||||| ||||||||||||| |||||||| ||||| ||||| || |||||| | | || | || ||||| ||| | |||||||| | |
|
|
T |
4226 |
gactcacatggtagctaaggaagcagagtattggtggactaatgctaagggaagacttgagattggtggggaggttgtgacttggataaggttcaaggct |
4325 |
T |
 |
Q |
185 |
gaattcttgaggaagtatttcccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcgg |
284 |
Q |
|
|
|| || ||||||||||| || || || || ||||| || | |||||| || ||||| |||||| |||| ||||||| ||||| || || |||||||||| |
|
|
T |
4326 |
gagtttttgaggaagtactttccagaggatttgagaactaggaaggaagtggagttcctgaatttgaagcaagggagtatgtctgtggccgagtatgcgg |
4425 |
T |
 |
Q |
285 |
cgaagtttgaggagctttcgaggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacat |
384 |
Q |
|
|
||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |
|
|
T |
4426 |
cgaagtttgaggagcttgcaaggttttgtccctacatcaatgcggaggatgctatggtttcgaagtgtgtgaagtttgaaagtgggcttaggccggacat |
4525 |
T |
 |
Q |
385 |
ctatcagtatatgtgtgttcaggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
T |
4526 |
ctatcagtacatgtgtgttcaggagatccgagactttgatactttggtgcataagtgtcgtatgtttgatgatg |
4599 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 178; Significance: 8e-96; HSPs: 8)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 29 - 458
Target Start/End: Original strand, 27104144 - 27104573
Alignment:
Q |
29 |
atggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgaggaagcagagtactggtggaccaatg |
128 |
Q |
|
|
|||||| |||| || || |||||||| || | ||||| |||||||| || | || ||||| ||| | |||||||| || ||||| ||||||||||||| |
|
|
T |
27104144 |
atggagaggatctttcgtgctatggtgactagtgatgatcagaaggtgaggttggctactcacatgcttgctgaggaggctgagtattggtggaccaatg |
27104243 |
T |
 |
Q |
129 |
ccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtatttcccggaagacttgaggaccaagaa |
228 |
Q |
|
|
| ||||| || |||||| | | || | || ||||| ||| | | |||||||| ||| || ||||||||||| || || || || |||||||| | ||| |
|
|
T |
27104244 |
ctaagggaagacttgagattggtggagaggttgtgacttggacaaggttcaaggctgagtttttgaggaagtactttccagaggatttgaggactaggaa |
27104343 |
T |
 |
Q |
229 |
ggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcgaggttttgtccctacatcaatgct |
328 |
Q |
|
|
||| || ||||| |||||| |||| ||||||| ||||| || || ||||||||||||||||||||||||||| | ||||||||||||||||||||||| |
|
|
T |
27104344 |
ggaagtggagttcctgaatttgaagcaagggagtatgtctgtggccgagtatgcggcgaagtttgaggagcttgcaaggttttgtccctacatcaatgcg |
27104443 |
T |
 |
Q |
329 |
gaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttcaggagatccgagactttgatactt |
428 |
Q |
|
|
||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
T |
27104444 |
gaggatgctatggtttccaagtgtgtgaagtttgaaagtgggcttaggccggacatctatcagtacatgtgtgttcaggagatccgagactttgatactt |
27104543 |
T |
 |
Q |
429 |
tggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
||||||| |||||||||||||||||||||| |
|
|
T |
27104544 |
tggtgcataagtgtcgtatgtttgatgatg |
27104573 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 98 - 458
Target Start/End: Complemental strand, 27174112 - 27173752
Alignment:
Q |
98 |
gctgaggaagcagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgagga |
197 |
Q |
|
|
|||||||| || ||||| |||||||||||||| ||||| || |||||| | | || | || ||||| ||| | | |||||||| ||| || ||||||| |
|
|
T |
27174112 |
gctgaggaggctgagtattggtggaccaatgctaagggaagacttgagattggtggagaggttgtgacttggacaaggttcaaggctgagtttttgagga |
27174013 |
T |
 |
Q |
198 |
agtatttcccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgagga |
297 |
Q |
|
|
|||| || || || || |||||||| | |||||| || ||||| |||||| |||| ||||||| ||||| || || ||||||||||||||||||||||| |
|
|
T |
27174012 |
agtactttccagaggatttgaggactaggaaggaagtggagttcctgaatttgaagcaagggagtatgtctgtggccgagtatgcggcgaagtttgagga |
27173913 |
T |
 |
Q |
298 |
gctttcgaggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatg |
397 |
Q |
|
|
|||| | ||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||| ||| |
|
|
T |
27173912 |
gcttgcaaggttttgtccctacatcaatgcggaggatgctatggtttccaagtgtgtgaagtttgaaagtgggcttaggccggacatctatcagtacatg |
27173813 |
T |
 |
Q |
398 |
tgtgttcaggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
T |
27173812 |
tgtgttcaggagatccgagactttgatactttggtgcataagtgtcgtatgtttgatgatg |
27173752 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 29 - 458
Target Start/End: Complemental strand, 7827800 - 7827371
Alignment:
Q |
29 |
atggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgaggaagcagagtactggtggaccaatg |
128 |
Q |
|
|
|||||| |||| || || |||||||| || | ||||| |||||||| || | || ||||| ||| | |||||||| || ||||| ||||||||||||| |
|
|
T |
7827800 |
atggagaggatctttcgtgctatggtgactagtgatgatcagaaggtgaggttggctactcacatgcttgctgaggaggctgagtattggtggaccaatg |
7827701 |
T |
 |
Q |
129 |
ccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtatttcccggaagacttgaggaccaagaa |
228 |
Q |
|
|
| ||||| || |||||| | | || | || ||||| ||| | | |||||||| ||| || ||||||||||| || || || || |||||||| | ||| |
|
|
T |
7827700 |
ctaagggaagacttgagattggtggagaggttgtgacttggacaaggttcaaggctgagtttttgaggaagtactttccagaggatttgaggactaggaa |
7827601 |
T |
 |
Q |
229 |
ggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcgaggttttgtccctacatcaatgct |
328 |
Q |
|
|
||| || ||||| |||||| |||| ||||||| ||||| || || ||||||||||||||||||||||||||| | |||||||| |||||||||||||| |
|
|
T |
7827600 |
ggaagtggagttcctgaatttgaagcaagggagtatgtctgtggccgagtatgcggcgaagtttgaggagcttgcaaggttttgcccctacatcaatgcg |
7827501 |
T |
 |
Q |
329 |
gaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttcaggagatccgagactttgatactt |
428 |
Q |
|
|
||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
T |
7827500 |
gaggatgctatggtttccaagtgtgtgaagtttgaaagtgggcttaggccggacatctatcagtacatgtgtgttcaggagatccgagactttgatactt |
7827401 |
T |
 |
Q |
429 |
tggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
||||||| |||||||||||||||||||||| |
|
|
T |
7827400 |
tggtgcataagtgtcgtatgtttgatgatg |
7827371 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 249 - 460
Target Start/End: Complemental strand, 4443603 - 4443392
Alignment:
Q |
249 |
tgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcgaggttttgtccctacatcaatgctgaggatgctatggtttcgaa |
348 |
Q |
|
|
|||| ||||||| |||||| || |||||||||||||||||||||||||||||| ||||||||| | | ||||| |||| ||||||||| ||||| || || |
|
|
T |
4443603 |
tgaagcaagggagcatgtctgtggctgagtatgcggcgaagtttgaggagcttgcgaggttttatgcgtacattaatgttgaggatgcaatggtgtccaa |
4443504 |
T |
 |
Q |
349 |
gtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttcaggagatccgagactttgatactttggtgcacaagtgtcgtatg |
448 |
Q |
|
|
|||| |||| ||||| ||||| | ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| |
|
|
T |
4443503 |
gtgtgtgaaatttgaaagtggacataggccggatatctatcagtatatgtgtgttaaggagatccgagactttgatactttggtgcataagtgtcgtatg |
4443404 |
T |
 |
Q |
449 |
tttgatgatgtc |
460 |
Q |
|
|
|||||||||||| |
|
|
T |
4443403 |
tttgatgatgtc |
4443392 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 191 - 456
Target Start/End: Complemental strand, 13459749 - 13459484
Alignment:
Q |
191 |
ttgaggaagtatttcccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagt |
290 |
Q |
|
|
|||||||||||||| || || || ||||||| || |||||| || || || |||| |||| ||||||| | |||| || || ||||||| || |||| |
|
|
T |
13459749 |
ttgaggaagtattttccagaggatttgaggagcaggaaggaagtggaattcttgaacttgaagcaagggagcttgtctgtcactaagtatgctgcaaagt |
13459650 |
T |
 |
Q |
291 |
ttgaggagctttcgaggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatca |
390 |
Q |
|
|
||||||| ||| ||||||||| ||||||||| |||| || ||||| ||||||||||||||| |||||||||| ||||||||| || ||| |||||||| |
|
|
T |
13459649 |
ttgaggaacttccgaggttttatccctacattaatgtcgaagatgcaatggtttcgaagtgtgtgaagtttgaacgtgggcttaagctggatatctatca |
13459550 |
T |
 |
Q |
391 |
gtatatgtgtgttcaggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatga |
456 |
Q |
|
|
|||| |||||||| |||| || ||||||| |||||||||||||||||||||||||| || ||||| |
|
|
T |
13459549 |
gtatgtgtgtgtttaggatattagagacttcgatactttggtgcacaagtgtcgtatattcgatga |
13459484 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 5 - 106
Target Start/End: Original strand, 16575119 - 16575220
Alignment:
Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
|
|
||||||||||||| ||||||||| ||||||||||| |||| || ||||| | |||||||||||||||||||||||| || ||||||||| | ||||||| |
|
|
T |
16575119 |
ggagcacagacttaggtgcagggcatggagcggatattccatgccatggtgatgggagatgaccagaaggtcagactggcaactcatatgcttgctgagg |
16575218 |
T |
 |
Q |
105 |
aa |
106 |
Q |
|
|
|| |
|
|
T |
16575219 |
aa |
16575220 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 5 - 106
Target Start/End: Complemental strand, 16590543 - 16590442
Alignment:
Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
|
|
||||||||||||| ||||||||| ||||||||||| |||| || ||||| | |||||||||||||||||||||||| || ||||||||| | ||||||| |
|
|
T |
16590543 |
ggagcacagacttaggtgcagggcatggagcggatattccatgccatggtgatgggagatgaccagaaggtcagactggcaactcatatgcttgctgagg |
16590444 |
T |
 |
Q |
105 |
aa |
106 |
Q |
|
|
|| |
|
|
T |
16590443 |
aa |
16590442 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 458
Target Start/End: Complemental strand, 14218629 - 14218525
Alignment:
Q |
354 |
tgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttcaggagatccgagactttgatactttggtgcacaagtgtcgtatgtttga |
453 |
Q |
|
|
|||||||||||| ||| || ||||| || || || ||||| || ||| | || |||||| | || || ||||||||||||||||||||| | |||||||| |
|
|
T |
14218629 |
tgaagtttgagaatggtctgaggccagagatttaccagtacatttgtttgcatgagatcagggatttcgatactttggtgcacaagtgttgcatgtttga |
14218530 |
T |
 |
Q |
454 |
tgatg |
458 |
Q |
|
|
||||| |
|
|
T |
14218529 |
tgatg |
14218525 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0302 (Bit Score: 163; Significance: 7e-87; HSPs: 2)
Name: scaffold0302
Description:
Target: scaffold0302; HSP #1
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 5 - 211
Target Start/End: Complemental strand, 3374 - 3168
Alignment:
Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
|
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||| |
|
|
T |
3374 |
ggagcacagacttgggtgcaggggatggagcggattttccgagctatggttacgggagatgaccagaaggttagactggcgactcatatgttgactgagg |
3275 |
T |
 |
Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
|
|
|||||||| | |||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
T |
3274 |
aagcagagcattggtggaccaatgccaagggaaggcttgagttgggaggtgatgtggtgacctgggctaagttcaaggttgaattcttgaggaagtattt |
3175 |
T |
 |
Q |
205 |
cccggaa |
211 |
Q |
|
|
||||||| |
|
|
T |
3174 |
cccggaa |
3168 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0302; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 410 - 458
Target Start/End: Complemental strand, 1770 - 1722
Alignment:
Q |
410 |
atccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
|||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
T |
1770 |
atccgagactttgatactttggtgcataagtgtcgtatgtttgatgatg |
1722 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0162 (Bit Score: 159; Significance: 2e-84; HSPs: 2)
Name: scaffold0162
Description:
Target: scaffold0162; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 232 - 458
Target Start/End: Complemental strand, 16638 - 16412
Alignment:
Q |
232 |
ggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcgaggttttgtccctacatcaatgctgag |
331 |
Q |
|
|
||||||||||||||||||||||||||| | |||||| ||||| |||||||||||||||||| ||||||| || ||||||||||||||||||||| |||| |
|
|
T |
16638 |
ggttgagtttctgaatctgaaacaaggaagcatgtctgtagccgagtatgcggcgaagtttcaggagctgtctaggttttgtccctacatcaatcttgag |
16539 |
T |
 |
Q |
332 |
gatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttcaggagatccgagactttgatactttgg |
431 |
Q |
|
|
|||||||||||||||||| || |||||||||||||||| ||| ||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||| |
|
|
T |
16538 |
gatgctatggtttcgaagcgtgtgaagtttgagagtggacttgggccggatatctatcagtacatgtgtgttcaagagatccgagactttgatactttgg |
16439 |
T |
 |
Q |
432 |
tgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
|||| |||||||||||||||||||||| |
|
|
T |
16438 |
tgcataagtgtcgtatgtttgatgatg |
16412 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0162; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 16753 - 16637
Alignment:
Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
|
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||| |||| |
|
|
T |
16753 |
ggagcacagacttgggtgcagggtatggagcggattttccgagctatggttacgggagatgaccataaggtcagactagcaactcatatgctaggtgaga |
16654 |
T |
 |
Q |
105 |
aagcagagtactggtgg |
121 |
Q |
|
|
| || ||| |||||||| |
|
|
T |
16653 |
aggcggagcactggtgg |
16637 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0141 (Bit Score: 148; Significance: 6e-78; HSPs: 1)
Name: scaffold0141
Description:
Target: scaffold0141; HSP #1
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 279 - 458
Target Start/End: Complemental strand, 24653 - 24474
Alignment:
Q |
279 |
atgcggcgaagtttgaggagctttcgaggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggcc |
378 |
Q |
|
|
||||||||||||||||||||||| | |||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
T |
24653 |
atgcggcgaagtttgaggagcttgcaaggttttgcccctacatcaatgcggaggatgctatggtttcgaagtgtgtgaagtttgaaagtgggcttaggcc |
24554 |
T |
 |
Q |
379 |
ggacatctatcagtatatgtgtgttcaggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
T |
24553 |
ggacatctatcagtacatgtgtgttcaggagatccgagactttgatactttggtgcataagtgtcgtatgtttgatgatg |
24474 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0011 (Bit Score: 135; Significance: 4e-70; HSPs: 5)
Name: scaffold0011
Description:
Target: scaffold0011; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 5 - 191
Target Start/End: Original strand, 73065 - 73251
Alignment:
Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
|
|
||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |
|
|
T |
73065 |
ggagcacagacttgggtgcagggtatagcgcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgctagccgagg |
73164 |
T |
 |
Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattct |
191 |
Q |
|
|
|||||||| |||||||||| || ||||| || ||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||| |
|
|
T |
73165 |
aagcagagcactggtggactaacgccaaaggaaggcttgagttgggaggtgatgtggtgacctgggctaagttcaaggttgaattct |
73251 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0011; HSP #2
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 5 - 191
Target Start/End: Original strand, 77446 - 77632
Alignment:
Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
|
|
||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |
|
|
T |
77446 |
ggagcacagacttgggtgcagggtatagcgcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgctagccgagg |
77545 |
T |
 |
Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattct |
191 |
Q |
|
|
|||||||| |||||||||| || ||||| || ||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||| |
|
|
T |
77546 |
aagcagagcactggtggactaacgccaaaggaaggcttgagttgggaggtgatgtggtgacctgggctaagttcaaggttgaattct |
77632 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0011; HSP #3
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 311 - 458
Target Start/End: Original strand, 77661 - 77808
Alignment:
Q |
311 |
tgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttcaggaga |
410 |
Q |
|
|
||||||||| |||||| |||||| |||||| | ||||||||| |||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
T |
77661 |
tgtccctacttcaatgttgaggacgctatgatctcgaagtgtgtgaattttgagagtgggcttaggccggatatctatcagtacatgtgtgttcaggaga |
77760 |
T |
 |
Q |
411 |
tccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
|||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
T |
77761 |
tccgagactttgatactttggtgcacaaatgtcgtatgtttgatgatg |
77808 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0011; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 311 - 458
Target Start/End: Original strand, 73280 - 73427
Alignment:
Q |
311 |
tgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttcaggaga |
410 |
Q |
|
|
||||||||| |||||| |||||| |||||| | ||||||||| |||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
T |
73280 |
tgtccctacttcaatgttgaggacgctatgatctcgaagtgtgtgaattttgagagtgggcttaggccggatatctatcagtacatgtgtgttcaggaga |
73379 |
T |
 |
Q |
411 |
tccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
||||||||||||||||||||||||| || ||||||||||||||||||| |
|
|
T |
73380 |
tccgagactttgatactttggtgcaaaaatgtcgtatgtttgatgatg |
73427 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0011; HSP #5
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 344 - 459
Target Start/End: Complemental strand, 182615 - 182500
Alignment:
Q |
344 |
tcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttcaggagatccgagactttgatactttggtgcacaagtgtc |
443 |
Q |
|
|
||||||||| |||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
T |
182615 |
tcgaagtgtttgaagtttgagagtgggcttaggccggatatctattagtacatgtgtgttcaggagatccgagactttgatactttggtgcataagtgtc |
182516 |
T |
 |
Q |
444 |
gtatgtttgatgatgt |
459 |
Q |
|
|
|||||||||||||||| |
|
|
T |
182515 |
gtatgtttgatgatgt |
182500 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0138 (Bit Score: 130; Significance: 4e-67; HSPs: 1)
Name: scaffold0138
Description:
Target: scaffold0138; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 162 - 459
Target Start/End: Original strand, 25197 - 25494
Alignment:
Q |
162 |
tgacctgggccaagttcaaggttgaattcttgaggaagtatttcccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggat |
261 |
Q |
|
|
|||| ||||| |||||||| | ||| || ||||||||||| || || || || || ||||| | |||||| || ||||| |||| |||| ||||||| |
|
|
T |
25197 |
tgacttgggctaagttcaaagctgagtttttgaggaagtactttccagaggatttaaggactaggaaggaagtggagttcttgaacttgaagcaagggag |
25296 |
T |
 |
Q |
262 |
catgtcggtagctgagtatgcggcgaagtttgaggagctttcgaggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagttt |
361 |
Q |
|
|
||||| || || ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||| ||||| ||||||| |
|
|
T |
25297 |
catgttcgtggccgagtatgcggcgaagtttgaggagcttccgaggttttgtccgtacatcaatgctgaggatgcgatggtttccaagtgcgcgaagttt |
25396 |
T |
 |
Q |
362 |
gagagtgggcttaggccggacatctatcagtatatgtgtgttcaggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatgt |
459 |
Q |
|
|
|| |||||| |||||||||| |||||||||||||||||||||| ||||| | ||| ||||||||||||||||| ||||||||||||||||||||||| |
|
|
T |
25397 |
gaaagtgggattaggccggatgtctatcagtatatgtgtgttcaagagattcaagattttgatactttggtgcataagtgtcgtatgtttgatgatgt |
25494 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0049 (Bit Score: 128; Significance: 6e-66; HSPs: 1)
Name: scaffold0049
Description:
Target: scaffold0049; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 5 - 456
Target Start/End: Original strand, 35513 - 35963
Alignment:
Q |
5 |
ggagcacagacttgggtgcagggaatggagcggattttccgagctatggttacgggagatgaccagaaggtcagactagcgactcatatgttagctgagg |
104 |
Q |
|
|
||||| ||||| |||||||| || |||||| |||| ||||| |||||||| || | ||||| ||||||||||| | || || || ||| | ||||||| |
|
|
T |
35513 |
ggagctcagacatgggtgcaaggcatggagaggatcttccgtgctatggtgactagtgatgatcagaaggtcaggttggctacccacatgcttgctgagg |
35612 |
T |
 |
Q |
105 |
aagcagagtactggtggaccaatgccaagggcaggcttgagttggaaggtggtgtggtgacctgggccaagttcaaggttgaattcttgaggaagtattt |
204 |
Q |
|
|
|||| |||| |||||||| ||||| ||||| || |||||| | | || | || ||||| ||||| | ||||||| || || |||| ||| || || |
|
|
T |
35613 |
aagctgagttttggtggactaatgctaaggggagacttgaggtcggtggagaggttgtgacttgggctaggttcaagaccgagtttttgacgaaatactt |
35712 |
T |
 |
Q |
205 |
cccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcg |
304 |
Q |
|
|
|| || || ||||| || | ||||| || ||||| ||||| |||| ||||||| ||||| || ||||||||||| || |||||||||||||||||| |
|
|
T |
35713 |
tcctgaggatttgagtactagaaaggaagtggagttcttgaatttgaagcaagggagtatgtctgtggctgagtatgcagcaaagtttgaggagctttcg |
35812 |
T |
 |
Q |
305 |
aggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttc |
404 |
Q |
|
|
||||||||||| ||||| |||||||| ||||| ||||||||||||||| |||||||||| ||||||||||| ||||| |||||||||||||||||||||| |
|
|
T |
35813 |
aggttttgtccatacattaatgctgaagatgcgatggtttcgaagtgtgtgaagtttgaaagtgggcttagcccggatatctatcagtatatgtgtgttc |
35912 |
T |
 |
Q |
405 |
aggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatga |
456 |
Q |
|
|
||||||| |||| || ||| |||||||||| |||||||||||||||||||| |
|
|
T |
35913 |
aggagattagagatttcgat-ctttggtgcataagtgtcgtatgtttgatga |
35963 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0561 (Bit Score: 114; Significance: 1e-57; HSPs: 1)
Name: scaffold0561
Description:
Target: scaffold0561; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 161 - 458
Target Start/End: Original strand, 5509 - 5806
Alignment:
Q |
161 |
gtgacctgggccaagttcaaggttgaattcttgaggaagtatttcccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaaggga |
260 |
Q |
|
|
||||| ||||| | |||||||||||| || |||||||| || || || || || ||||| || | ||||| || ||||| |||| |||| ||||||| |
|
|
T |
5509 |
gtgacttgggcaaggttcaaggttgagtttttgaggaaatactttccagaggatttgagaactagaaaggaagtggagttcttgaacttgaagcaaggga |
5608 |
T |
 |
Q |
261 |
tcatgtcggtagctgagtatgcggcgaagtttgaggagctttcgaggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtt |
360 |
Q |
|
|
|||||| || |||||||||||| | |||||||| ||||||||| |||||||||| || || |||| ||| ||||| ||||||||||||||| ||||||| |
|
|
T |
5609 |
gcatgtcagtggctgagtatgcgccaaagtttgaagagctttcgtggttttgtccgtatattaatgttgaagatgcaatggtttcgaagtgtgtgaagtt |
5708 |
T |
 |
Q |
361 |
tgagagtgggcttaggccggacatctatcagtatatgtgtgttcaggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||| |||||||| ||| ||||||||||||| |||| |
|
|
T |
5709 |
tgaaagtgggcttaggccggatatctatcagtatatgtgtgttcaggagatttgagattttgatatcttggtgcataagcgtcgtatgtttgaagatg |
5806 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0151 (Bit Score: 110; Significance: 3e-55; HSPs: 1)
Name: scaffold0151
Description:
Target: scaffold0151; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 191 - 456
Target Start/End: Original strand, 32401 - 32665
Alignment:
Q |
191 |
ttgaggaagtatttcccggaagacttgaggaccaagaaggaggttgagtttctgaatctgaaacaagggatcatgtcggtagctgagtatgcggcgaagt |
290 |
Q |
|
|
||||||||||| || || || || |||||||| |||| || || ||||| |||| |||| ||||||| ||||| || |||||||||||||| || | |
|
|
T |
32401 |
ttgaggaagtactttccagaggatttgaggactcagaaagaagtggagttcttgaacttgaagcaagggagcatgttcgtggctgagtatgcggcaaaat |
32500 |
T |
 |
Q |
291 |
ttgaggagctttcgaggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatca |
390 |
Q |
|
|
||||||||||| ||||||||||| | ||||| |||| |||||||| ||| | || |||||| |||| ||||| ||||||||||||||||| |||||||| |
|
|
T |
32501 |
ttgaggagcttgcgaggttttgttcgtacattaatgttgaggatgtgatg-tgtccaagtgtgtgaattttgaaagtgggcttaggccggatatctatca |
32599 |
T |
 |
Q |
391 |
gtatatgtgtgttcaggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatga |
456 |
Q |
|
|
||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||| |
|
|
T |
32600 |
gtatatgtgtgtttaggagatccaagactttgatactttggtgcataagtgtcgtatgtttgatga |
32665 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0170 (Bit Score: 105; Significance: 3e-52; HSPs: 1)
Name: scaffold0170
Description:
Target: scaffold0170; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 354 - 458
Target Start/End: Complemental strand, 35691 - 35587
Alignment:
Q |
354 |
tgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttcaggagatccgagactttgatactttggtgcacaagtgtcgtatgtttga |
453 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
35691 |
tgaagtttgagagtgggcttaggccggacatctatcagtatatgtgtgttcaggagatccgagactttgatactttggtgcacaagtgtcgtatgtttga |
35592 |
T |
 |
Q |
454 |
tgatg |
458 |
Q |
|
|
||||| |
|
|
T |
35591 |
tgatg |
35587 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0112 (Bit Score: 91; Significance: 7e-44; HSPs: 1)
Name: scaffold0112
Description:
Target: scaffold0112; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 298 - 460
Target Start/End: Complemental strand, 4161 - 3999
Alignment:
Q |
298 |
gctttcgaggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatctatcagtatatg |
397 |
Q |
|
|
|||||| |||||||| || ||||||||||| ||||||| ||||||||| |||||| |||||||||| ||| ||||||||| ||| || ||||||||||| |
|
|
T |
4161 |
gctttccaggttttgcccgtacatcaatgcggaggatgttatggtttccaagtgtgtgaagtttgaaagtaggcttaggctggatatgtatcagtatatt |
4062 |
T |
 |
Q |
398 |
tgtgttcaggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatgtc |
460 |
Q |
|
|
||||| ||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||| |
|
|
T |
4061 |
tgtgtccaggagatcgaagattttgatactttggtgcataagtgtcgtatgtttgatgatgtc |
3999 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0058 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0058
Description:
Target: scaffold0058; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 287 - 456
Target Start/End: Complemental strand, 78103 - 77934
Alignment:
Q |
287 |
aagtttgaggagctttcgaggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatct |
386 |
Q |
|
|
|||||||||||||| || |||||||||| |||||| |||| ||||||||||||||| ||||| ||| |||||||||||||||| | ||||| || || | |
|
|
T |
78103 |
aagtttgaggagctatcaaggttttgtcgctacattaatgttgaggatgctatggtgtcgaaatgtgtgaagtttgagagtggattgaggcccgagattt |
78004 |
T |
 |
Q |
387 |
atcagtatatgtgtgttcaggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatga |
456 |
Q |
|
|
|||||||||| || |||| ||||| | ||||||||||||||||||||||||||||| |||||||||| |
|
|
T |
78003 |
atcagtatatctgctttcatgagatttgtgactttgatactttggtgcacaagtgtcgcctgtttgatga |
77934 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0193 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold0193
Description:
Target: scaffold0193; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 249 - 363
Target Start/End: Complemental strand, 2296 - 2182
Alignment:
Q |
249 |
tgaaacaagggatcatgtcggtagctgagtatgcggcgaagtttgaggagctttcgaggttttgtccctacatcaatgctgaggatgctatggtttcgaa |
348 |
Q |
|
|
|||| ||||||| |||||| || |||||||||||||||||||||||||||||||||||| ||||||| ||||| |||| ||| ||||| ||||||||||| |
|
|
T |
2296 |
tgaagcaagggagcatgtccgtggctgagtatgcggcgaagtttgaggagctttcgaggatttgtccgtacattaatgttgaagatgcgatggtttcgaa |
2197 |
T |
 |
Q |
349 |
gtgtctgaagtttga |
363 |
Q |
|
|
|||| |||||||||| |
|
|
T |
2196 |
gtgtgtgaagtttga |
2182 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0018 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0018
Description:
Target: scaffold0018; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 287 - 458
Target Start/End: Complemental strand, 49341 - 49170
Alignment:
Q |
287 |
aagtttgaggagctttcgaggttttgtccctacatcaatgctgaggatgctatggtttcgaagtgtctgaagtttgagagtgggcttaggccggacatct |
386 |
Q |
|
|
||||| |||||| | |||| |||||| || ||||| |||| ||||||||||||| | || || ||| |||||||||||||||| | ||||| || || | |
|
|
T |
49341 |
aagttcgaggagttgtcgatgttttgcccgtacattaatgttgaggatgctatgatatctaaatgtgtgaagtttgagagtggtttgaggcctgagattt |
49242 |
T |
 |
Q |
387 |
atcagtatatgtgtgttcaggagatccgagactttgatactttggtgcacaagtgtcgtatgtttgatgatg |
458 |
Q |
|
|
|||| || || ||| |||| |||||| |||| ||||||||||||||||||||||||| |||||| |||||| |
|
|
T |
49241 |
atcaatacatctgttttcatgagatcagagattttgatactttggtgcacaagtgtcacatgtttaatgatg |
49170 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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