View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0759_low_108 (Length: 238)

Name: NF0759_low_108
Description: NF0759
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0759_low_108
NF0759_low_108
[»] chr8 (17 HSPs)
chr8 (19-228)||(28846502-28846711)
chr8 (25-226)||(13152478-13152682)
chr8 (27-228)||(27190660-27190864)
chr8 (19-226)||(14446714-14446923)
chr8 (26-228)||(24333602-24333807)
chr8 (101-228)||(9256355-9256482)
chr8 (138-226)||(16532715-16532806)
chr8 (138-228)||(21958512-21958605)
chr8 (138-228)||(30791540-30791633)
chr8 (160-228)||(10467786-10467857)
chr8 (167-226)||(10014519-10014579)
chr8 (178-225)||(42446961-42447008)
chr8 (24-62)||(9256307-9256345)
chr8 (199-228)||(32342880-32342909)
chr8 (199-228)||(32355367-32355396)
chr8 (199-228)||(32359486-32359515)
chr8 (199-228)||(32372022-32372051)
[»] chr4 (11 HSPs)
chr4 (19-228)||(31944497-31944709)
chr4 (112-225)||(4325387-4325502)
chr4 (138-228)||(12211308-12211401)
chr4 (138-228)||(27364883-27364976)
chr4 (138-228)||(53693116-53693209)
chr4 (138-228)||(55464742-55464835)
chr4 (138-228)||(42843707-42843800)
chr4 (180-225)||(3074414-3074459)
chr4 (25-73)||(24104671-24104719)
chr4 (26-68)||(51379529-51379571)
chr4 (55-117)||(24104597-24104659)
[»] scaffold0178 (1 HSPs)
scaffold0178 (25-228)||(17627-17833)
[»] chr7 (14 HSPs)
chr7 (19-226)||(43727877-43728087)
chr7 (19-228)||(9230282-9230494)
chr7 (89-228)||(23179967-23180109)
chr7 (85-176)||(23804635-23804726)
chr7 (16-140)||(5287946-5288070)
chr7 (24-143)||(24276397-24276517)
chr7 (138-228)||(27387388-27387481)
chr7 (138-228)||(45197644-45197736)
chr7 (138-228)||(19399978-19400071)
chr7 (19-154)||(25024464-25024599)
chr7 (138-228)||(26493796-26493889)
chr7 (148-228)||(18375416-18375499)
chr7 (122-228)||(8638598-8638707)
chr7 (138-228)||(38575371-38575464)
[»] chr2 (9 HSPs)
chr2 (19-228)||(12539455-12539666)
chr2 (19-222)||(34317555-34317761)
chr2 (142-225)||(35649745-35649831)
chr2 (138-228)||(19951913-19952006)
chr2 (138-228)||(33453270-33453363)
chr2 (178-228)||(13308759-13308809)
chr2 (138-228)||(22483549-22483642)
chr2 (138-228)||(34526352-34526445)
chr2 (138-226)||(22464670-22464761)
[»] chr5 (12 HSPs)
chr5 (19-228)||(3055362-3055575)
chr5 (19-228)||(8785664-8785875)
chr5 (25-228)||(11852602-11852808)
chr5 (19-228)||(27168885-27169089)
chr5 (83-225)||(23244655-23244800)
chr5 (142-228)||(1280382-1280471)
chr5 (138-228)||(203851-203943)
chr5 (138-228)||(26540737-26540830)
chr5 (156-226)||(22712983-22713048)
chr5 (157-228)||(22541905-22541979)
chr5 (184-225)||(2228964-2229005)
chr5 (199-228)||(19519024-19519053)
[»] chr3 (9 HSPs)
chr3 (26-226)||(3856960-3857163)
chr3 (26-228)||(51261867-51262072)
chr3 (33-228)||(15667868-15668066)
chr3 (138-228)||(43137127-43137220)
chr3 (138-228)||(31989029-31989122)
chr3 (138-228)||(53710398-53710491)
chr3 (138-228)||(24908475-24908568)
chr3 (138-228)||(37381951-37382044)
chr3 (157-226)||(43585836-43585908)
[»] chr1 (15 HSPs)
chr1 (27-226)||(48606696-48606898)
chr1 (19-228)||(30559087-30559299)
chr1 (19-228)||(14498779-14498990)
chr1 (19-225)||(9637003-9637211)
chr1 (98-228)||(52753899-52754032)
chr1 (123-228)||(25017371-25017479)
chr1 (122-228)||(32379937-32380043)
chr1 (123-228)||(40864801-40864909)
chr1 (138-228)||(17127439-17127532)
chr1 (138-228)||(26273011-26273104)
chr1 (178-228)||(35949060-35949110)
chr1 (43-112)||(30054770-30054839)
chr1 (138-228)||(21973870-21973963)
chr1 (178-228)||(30054864-30054914)
chr1 (19-67)||(52754030-52754078)
[»] chr6 (11 HSPs)
chr6 (19-228)||(12180607-12180819)
chr6 (16-222)||(11970838-11971047)
chr6 (138-228)||(24074412-24074505)
chr6 (145-228)||(25599159-25599245)
chr6 (167-226)||(3050894-3050954)
chr6 (121-228)||(25340428-25340538)
chr6 (188-228)||(30621226-30621266)
chr6 (138-228)||(32442056-32442146)
chr6 (183-226)||(1296557-1296600)
chr6 (26-68)||(8035493-8035535)
chr6 (98-140)||(8035438-8035480)
[»] scaffold0002 (1 HSPs)
scaffold0002 (51-225)||(435435-435617)
[»] scaffold0019 (1 HSPs)
scaffold0019 (138-228)||(134936-135029)
[»] scaffold0007 (1 HSPs)
scaffold0007 (138-228)||(259918-260011)
[»] scaffold0015 (1 HSPs)
scaffold0015 (138-228)||(214243-214336)
[»] scaffold0198 (1 HSPs)
scaffold0198 (178-228)||(1439-1489)
[»] scaffold0168 (1 HSPs)
scaffold0168 (138-228)||(15814-15907)
[»] scaffold0012 (1 HSPs)
scaffold0012 (138-226)||(197105-197196)


Alignment Details
Target: chr8 (Bit Score: 206; Significance: 1e-113; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 19 - 228
Target Start/End: Original strand, 28846502 - 28846711
Alignment:
Q  19 aatatcgggtgcaccaaagctataaccaacatcaacaaaagttgtaagtctaccagtttccaaaccctgtcaataagctagtaaaataatcttataagtc 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  28846502 aatatcgggtgcaccaaagctataaccaacatcaacaaaagttgtaagtctaccagttgccaaaccctgtcaataagctagtaaaataatcttataagtc 28846601  T
Q  119 cgtgagaaagaattgttaccaacaagatcaacgatgtgtggttcaatgacttgatgatgtacatcgagcgggagatattcaagtcacttgatgatgttga 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28846602 cgtgagaaagaattgttaccaacaagatcaacgatgtgtggttcaatgacttgatgatgtacatcgagcgggagatattcaagtcacttgatgatgttga 28846701  T
Q  219 tattattcga 228  Q
    ||||||||||    
T  28846702 tattattcga 28846711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 25 - 226
Target Start/End: Complemental strand, 13152682 - 13152478
Alignment:
Q  25 gggtgcaccaaagctataaccaacatcaacaaaagttgtaagtctaccagtttccaaaccctgtcaataagctagtaaaataatcttataagtccgtgag 124  Q
    ||||||||||||||||| |||||||||||||||||||| ||||  |||||||  ||| || |||||| |||||||||||||||||||||||| |||||||    
T  13152682 gggtgcaccaaagctattaccaacatcaacaaaagttggaagtacaccagttatcaagccatgtcaaaaagctagtaaaataatcttataagcccgtgag 13152583  T
Q  125 aaagaattgttaccaacaagatcaacgatgtgtggttcaatgacttgatgat---gtacatcgagcgggagatattcaagtcacttgatgatgttgatat 221  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||    ||||||||||||||||||||||||||| |||||||||||| |||    
T  13152582 aaagaattgttaccaacatgatcaacgctgtgtggttcaatgacttgatgatatgttacatcgagcgggagatattcaagtcatttgatgatgttggtat 13152483  T
Q  222 tattc 226  Q
    |||||    
T  13152482 tattc 13152478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 27 - 228
Target Start/End: Original strand, 27190660 - 27190864
Alignment:
Q  27 gtgcaccaaagctataaccaacatcaacaaaagttgtaagtctaccagtttccaaaccctgtcaataagctagtaaaataatcttataagtccgtgagaa 126  Q
    ||||||||||||||| |||||||||||||||||||| ||||| |||||||  ||| || |||||| |||||||||||||||||||||||| ||| |||||    
T  27190660 gtgcaccaaagctattaccaacatcaacaaaagttggaagtccaccagttgtcaagccatgtcaacaagctagtaaaataatcttataagcccgcgagaa 27190759  T
Q  127 agaattgttaccaacaagatcaacgatgtgtggttcaatgacttgatgat---gtacatcgagcgggagatattcaagtcacttgatgatgttgatatta 223  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||    | || | |||||||||||||||||||||||||||||||||||||||    
T  27190760 agaattgttacaaacaagatcaacgatgtgtggttcaatgacttgatgatatgttgcacctagcgggagatattcaagtcacttgatgatgttgatatta 27190859  T
Q  224 ttcga 228  Q
     ||||    
T  27190860 ctcga 27190864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 19 - 226
Target Start/End: Original strand, 14446714 - 14446923
Alignment:
Q  19 aatatcgggtgcaccaaagctataaccaacatcaacaaaagttgtaagtctaccagtttccaaaccctgtcaataagctagtaaaataatcttataagtc 118  Q
    ||||| |||| |||||||||||| |||||||||||||||||||| ||||| ||||||   |||  |||||||||||||||||||||||||||||||||||    
T  14446714 aatattgggtacaccaaagctattaccaacatcaacaaaagttggaagtccaccagtagtcaagtcctgtcaataagctagtaaaataatcttataagtc 14446813  T
Q  119 cgtgagaaagaattgttaccaacaagatcaacgatgtgtggttcaatgacttgatgat---gtacatcgagcgggagatattcaagtcacttgatgatgt 215  Q
     | ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    |||| | || | ||||||||||||||||||||||||||    
T  14446814 tgcgagaaagaattgttacc-acaagatcaacgatttgtggttcaatgacttgatgatatgttacaccaagagagagatattcaagtcacttgatgatgt 14446912  T
Q  216 tgatattattc 226  Q
    |||||||||||    
T  14446913 tgatattattc 14446923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 26 - 228
Target Start/End: Original strand, 24333602 - 24333807
Alignment:
Q  26 ggtgcaccaaagctataaccaacatcaacaaaagttgtaagtctaccagtttccaaaccctgtcaataagctagtaaaataatcttataagtccgtgaga 125  Q
    ||||||||||| |||| ||||||||||| |||||||| ||||| ||| |||  |||  | ||||||||||||||||||||||||||||||| ||||||||    
T  24333602 ggtgcaccaaaactattaccaacatcaataaaagttggaagtccaccggttgtcaagtcttgtcaataagctagtaaaataatcttataagcccgtgaga 24333701  T
Q  126 aagaattgttaccaacaagatcaacgatgtgtggttcaatgacttgatgatgt---acatcgagcgggagatattcaagtcacttgatgatgttgatatt 222  Q
    |||||||||||||||||||||||||||||| || ||||||||||| ||||| |   |||  ||||||||||||||||||||||||||||||||| |||||    
T  24333702 aagaattgttaccaacaagatcaacgatgtatgattcaatgactttatgatatgttacactgagcgggagatattcaagtcacttgatgatgttaatatt 24333801  T
Q  223 attcga 228  Q
    ||||||    
T  24333802 attcga 24333807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 101 - 228
Target Start/End: Original strand, 9256355 - 9256482
Alignment:
Q  101 aaaataatcttataagtccgtgagaaagaattgttaccaacaagatcaacgatgtgtggttcaatgacttgatgatgt---acatcgagcgggagatatt 197  Q
    ||||||||||||||||  ||||||||||||||   ||||| | |||||| ||||||||||| |||||||||||||| |   |||||||||||||||||||    
T  9256355 aaaataatcttataagcacgtgagaaagaatt---accaatatgatcaatgatgtgtggtttaatgacttgatgatatgttacatcgagcgggagatatt 9256451  T
Q  198 caagtcacttgatgatgttgatattattcga 228  Q
    |||||||||||||||||||||||| ||||||    
T  9256452 caagtcacttgatgatgttgatataattcga 9256482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 16532806 - 16532715
Alignment:
Q  138 caacaagatcaacgatgtgtggttcaatgacttgatgat---gtacatcgagcgggagatattcaagtcacttgatgatgttgatattattc 226  Q
    |||||||||||||||||||||||||||||||||||||||    || | | || | |||||||||||||||||||||||||||||||||||||    
T  16532806 caacaagatcaacgatgtgtggttcaatgacttgatgatatgttataccaagtgagagatattcaagtcacttgatgatgttgatattattc 16532715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 228
Target Start/End: Original strand, 21958512 - 21958605
Alignment:
Q  138 caacaagatcaacgatgtgtggttcaatgacttgatgatgt---acatcgagcgggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    ||||||||||||| || ||||||| |||||||||||||| |   ||| ||||| |||||||||| |||||||||||||||||||||||||||||    
T  21958512 caacaagatcaacaatatgtggttgaatgacttgatgatatgttacaccgagcaggagatattcgagtcacttgatgatgttgatattattcga 21958605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 228
Target Start/End: Complemental strand, 30791633 - 30791540
Alignment:
Q  138 caacaagatcaacgatgtgtggttcaatgacttgatgatgt---acatcgagcgggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    ||||||||||||  ||| ||||||||||||||||||||| |   ||| ||||||||||||||||||||||||||||||  ||||||||||||||    
T  30791633 caacaagatcaagaatgagtggttcaatgacttgatgatatgttacaccgagcgggagatattcaagtcacttgatgacattgatattattcga 30791540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 228
Target Start/End: Original strand, 10467786 - 10467857
Alignment:
Q  160 ttcaatgacttgatgatgt---acatcgagcgggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    ||||||||||||||||| |   ||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  10467786 ttcaatgacttgatgatatgttacatcgagcgggagataatcaagtcatttgatgatgttgatattattcga 10467857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 226
Target Start/End: Complemental strand, 10014579 - 10014519
Alignment:
Q  167 acttgatgatgt-acatcgagcgggagatattcaagtcacttgatgatgttgatattattc 226  Q
    |||||||||||| ||| ||||||| ||||||||| ||||||||||||||||||||||||||    
T  10014579 acttgatgatgttacaccgagcggaagatattcatgtcacttgatgatgttgatattattc 10014519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 225
Target Start/End: Original strand, 42446961 - 42447008
Alignment:
Q  178 tacatcgagcgggagatattcaagtcacttgatgatgttgatattatt 225  Q
    |||||||||||| |||||||||||||||||||||| ||| ||||||||    
T  42446961 tacatcgagcggaagatattcaagtcacttgatgacgtttatattatt 42447008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 62
Target Start/End: Original strand, 9256307 - 9256345
Alignment:
Q  24 cgggtgcaccaaagctataaccaacatcaacaaaagttg 62  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  9256307 cgggtgcaccaaagctattaccaacatcaacaaaagttg 9256345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Original strand, 32342880 - 32342909
Alignment:
Q  199 aagtcacttgatgatgttgatattattcga 228  Q
    ||||||||||||||||||||||||||||||    
T  32342880 aagtcacttgatgatgttgatattattcga 32342909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Original strand, 32355367 - 32355396
Alignment:
Q  199 aagtcacttgatgatgttgatattattcga 228  Q
    ||||||||||||||||||||||||||||||    
T  32355367 aagtcacttgatgatgttgatattattcga 32355396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Original strand, 32359486 - 32359515
Alignment:
Q  199 aagtcacttgatgatgttgatattattcga 228  Q
    ||||||||||||||||||||||||||||||    
T  32359486 aagtcacttgatgatgttgatattattcga 32359515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Original strand, 32372022 - 32372051
Alignment:
Q  199 aagtcacttgatgatgttgatattattcga 228  Q
    ||||||||||||||||||||||||||||||    
T  32372022 aagtcacttgatgatgttgatattattcga 32372051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 131; Significance: 4e-68; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 19 - 228
Target Start/End: Original strand, 31944497 - 31944709
Alignment:
Q  19 aatatcgggtgcaccaaagctataaccaacatcaacaaaagttgtaagtctaccagtttccaaaccctgtcaataagctagtaaaataatcttataagtc 118  Q
    |||| ||||||||  |||||||| |||||||| ||||||||||| ||||| |||||||  ||| ||||| ||||||||||||||||||||||||||||      
T  31944497 aatagcgggtgcatgaaagctattaccaacattaacaaaagttggaagtccaccagttatcaagccctgccaataagctagtaaaataatcttataagct 31944596  T
Q  119 cgtgagaaagaattgttaccaacaagatcaacgatgtgtggttcaatgacttgatgat---gtacatcgagcgggagatattcaagtcacttgatgatgt 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||| |||| | ||||||||||||||||||||||||||    
T  31944597 cgtgagaaagaattgttaccaacaagatcaacgatgtgtggttcaatgacttgatgatatgttacaccgagtgtgagatattcaagtcacttgatgatgt 31944696  T
Q  216 tgatattattcga 228  Q
    |||||||||||||    
T  31944697 tgatattattcga 31944709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 225
Target Start/End: Original strand, 4325387 - 4325502
Alignment:
Q  112 ataagtccgtgagaaagaattgttaccaacaagatcaacgatgtgtggttcaatgacttgatgat---gtacatcgagcgggagatattcaagtcacttg 208  Q
    ||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    |||| |||| |||||||| ||||  ||||||    
T  4325387 ataagcccgtaagaaagaat-gttaccaacaagatcaacgatgtgtggttcaatgacttgatgatatgttacaccgagtgggagataatcaacccacttg 4325485  T
Q  209 atgatgttgatattatt 225  Q
    |||||||||||||||||    
T  4325486 atgatgttgatattatt 4325502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 138 - 228
Target Start/End: Complemental strand, 12211401 - 12211308
Alignment:
Q  138 caacaagatcaacgatgtgtggttcaatgacttgatgat---gtacatcgagcgggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    |||||||||||||||||||||||||||||||||||||||    |||| ||| | |||||||||||||||| |||||||||||||||||||||||    
T  12211401 caacaagatcaacgatgtgtggttcaatgacttgatgatatgttacaccgaacaggagatattcaagtcatttgatgatgttgatattattcga 12211308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 138 - 228
Target Start/End: Original strand, 27364883 - 27364976
Alignment:
Q  138 caacaagatcaacgatgtgtggttcaatgacttgatgatgt---acatcgagcgggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    |||||||||||||  ||||||||| |||||||||||||| |   ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27364883 caacaagatcaacagtgtgtggttaaatgacttgatgatatgttacaccgagcgggagatattcaagtcacttgatgatgttgatattattcga 27364976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 138 - 228
Target Start/End: Complemental strand, 53693209 - 53693116
Alignment:
Q  138 caacaagatcaacgatgtgtggttcaatgacttgatgatgt---acatcgagcgggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    ||||| |||||||| |||||||||||||||||||||||| |   ||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  53693209 caacatgatcaacggtgtgtggttcaatgacttgatgatatgttacatcgagcgggagataatcaaggcacttgatgatgttgatattattcga 53693116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 138 - 228
Target Start/End: Complemental strand, 55464835 - 55464742
Alignment:
Q  138 caacaagatcaacgatgtgtggttcaatgacttgatgatgt---acatcgagcgggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    ||||||||||||| |||||||||| |||||||||||||| |   ||| ||||||||||| | ||||||||||||||||||||||||||||||||    
T  55464835 caacaagatcaacaatgtgtggttgaatgacttgatgatatgttacaccgagcgggagaaaatcaagtcacttgatgatgttgatattattcga 55464742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 228
Target Start/End: Original strand, 42843707 - 42843800
Alignment:
Q  138 caacaagatcaacgatgtgtggttcaatgacttgatgatgt---acatcgagcgggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    ||||||||||||| |||||||||| ||||| |||||||| |   | || ||| | |||||||||||||||||||||||||||||||||| ||||    
T  42843707 caacaagatcaacaatgtgtggtttaatgagttgatgatatgttatattgagtgagagatattcaagtcacttgatgatgttgatattaatcga 42843800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 180 - 225
Target Start/End: Original strand, 3074414 - 3074459
Alignment:
Q  180 catcgagcgggagatattcaagtcacttgatgatgttgatattatt 225  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  3074414 catcgagcgggagataatcaagtcacttgatgatgttgatattatt 3074459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 24104719 - 24104671
Alignment:
Q  25 gggtgcaccaaagctataaccaacatcaacaaaagttgtaagtctacca 73  Q
    ||||||||||||||||| |||||||||||||||||||| ||||| ||||    
T  24104719 gggtgcaccaaagctatcaccaacatcaacaaaagttgaaagtccacca 24104671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 51379529 - 51379571
Alignment:
Q  26 ggtgcaccaaagctataaccaacatcaacaaaagttgtaagtc 68  Q
    |||||||||||||||| |||||||||||||||||||| |||||    
T  51379529 ggtgcaccaaagctattaccaacatcaacaaaagttggaagtc 51379571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 117
Target Start/End: Complemental strand, 24104659 - 24104597
Alignment:
Q  55 aaaagttgtaagtctaccagtttccaaaccctgtcaataagctagtaaaataatcttataagt 117  Q
    |||||||| ||||| |||||||  ||| | ||| |||||||||||||||| ||||||||||||    
T  24104659 aaaagttggaagtccaccagttatcaagctctgccaataagctagtaaaagaatcttataagt 24104597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 25 - 228
Target Start/End: Original strand, 17627 - 17833
Alignment:
Q  25 gggtgcaccaaagctataaccaacatcaacaaaagttgtaagtctaccagtttccaaaccctgtcaataagctagtaaaataatcttataagtccgtgag 124  Q
    |||||||||||| |||| |||||||||||||||||||| ||||| |||||||  ||| | ||||||||||||||||||||||||||||||||  | | ||    
T  17627 gggtgcaccaaaactattaccaacatcaacaaaagttggaagtccaccagttatcaatctctgtcaataagctagtaaaataatcttataagctcattag 17726  T
Q  125 aaagaattgttaccaacaagatcaacgatgtgtggttcaatgacttgatgat---gtacatcgagcgggagatattcaagtcacttgatgatgttgatat 221  Q
    ||| |||||||| |||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||| |||||||||| ||||||||||||    
T  17727 aaataattgttatcaacaagatcaacgatgtgtggttcaatgacttgatgatacgttacatcgagcgggagatatttaagtcacttgctgatgttgatat 17826  T
Q  222 tattcga 228  Q
    |||||||    
T  17827 tattcga 17833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 125; Significance: 2e-64; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 19 - 226
Target Start/End: Original strand, 43727877 - 43728087
Alignment:
Q  19 aatatcgggtgcaccaaagctataaccaacatcaacaaaagttgtaagtctaccagtttccaaaccctgtcaataagctagtaaaataatcttataagtc 118  Q
    |||| |||||||||||||||||| |||||||||||||||||||| ||||  |||||||  |||  | ||||||||||||||||||||||||||||||| |    
T  43727877 aatagcgggtgcaccaaagctattaccaacatcaacaaaagttggaagtacaccagttatcaactcatgtcaataagctagtaaaataatcttataagcc 43727976  T
Q  119 cgtgagaaagaattgttaccaacaagatcaacgatgtgtggttcaatgacttgatgat---gtacatcgagcgggagatattcaagtcacttgatgatgt 215  Q
      |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    || ||||| |||||||||||||||||| ||||||||||    
T  43727977 tatgagaaagaattgttaccaacatgatcaacgatgtgtggttcaatgacttgatgatatgttatatcgaacgggagatattcaagtcagttgatgatgt 43728076  T
Q  216 tgatattattc 226  Q
    |||||||||||    
T  43728077 tgatattattc 43728087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 19 - 228
Target Start/End: Original strand, 9230282 - 9230494
Alignment:
Q  19 aatatcgggtgcaccaaagctataaccaacatcaacaaaagttgtaagtctaccagtttccaaaccctgtcaataagctagtaaaataatcttataagtc 118  Q
    |||| |||||||||||||||||| | |||||||||||||||||| || |  | |||||  ||| || ||||||||||||||||||||||||||||||| |    
T  9230282 aatagcgggtgcaccaaagctattatcaacatcaacaaaagttggaaatacatcagttatcaagccatgtcaataagctagtaaaataatcttataagcc 9230381  T
Q  119 cgtgagaaagaattgttaccaacaagatcaacgatgtgtggttcaatgacttgatgat---gtacatcgagcgggagatattcaagtcacttgatgatgt 215  Q
    ||| ||||| |||||||||||||| | |||||||||||||||||||||||||||||||    ||||| |||||||||||| |||||||| ||||||||||    
T  9230382 cgttagaaaaaattgttaccaacatggtcaacgatgtgtggttcaatgacttgatgatatgttacatagagcgggagatactcaagtcatttgatgatgt 9230481  T
Q  216 tgatattattcga 228  Q
    |||||||||||||    
T  9230482 tgatattattcga 9230494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 89 - 228
Target Start/End: Complemental strand, 23180109 - 23179967
Alignment:
Q  89 caataagctagtaaaataatcttataagtccgtgagaaagaattgttaccaacaagatcaacgatgtgtggttcaatgacttgatgat---gtacatcga 185  Q
    ||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||    |||| |||    
T  23180109 caataagctagtaaaataatcttataagctcgtgagaaataattgttaccaacaagatcaacgatgtgtgtttcaataacttgatgatatgttacaccga 23180010  T
Q  186 gcgggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    ||| |||||||||||| |||||||| |||||||||||||||||    
T  23180009 gcgagagatattcaaggcacttgataatgttgatattattcga 23179967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 85 - 176
Target Start/End: Complemental strand, 23804726 - 23804635
Alignment:
Q  85 ctgtcaataagctagtaaaataatcttataagtccgtgagaaagaattgttaccaacaagatcaacgatgtgtggttcaatgacttgatgat 176  Q
    |||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  23804726 ctgtcaataagctagtaaaataatcttataagtttgtgagaaagaatggttaccaacaagatcaacgatgtgtggttcaatgacttgttgat 23804635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 5287946 - 5288070
Alignment:
Q  16 aaaaatatcgggtgcaccaaagctataaccaacatcaacaaaagttgtaagtctaccagtttccaaaccctgtcaataagctagtaaaataatcttataa 115  Q
    ||||||| |||||| ||||||||||| |||| ||||||||||||||| ||||| ||| |||  |||| ||||||||||||||||||||||||||||| ||    
T  5287946 aaaaatagcgggtgtaccaaagctattaccatcatcaacaaaagttggaagtccaccggttgtcaaatcctgtcaataagctagtaaaataatcttacaa 5288045  T
Q  116 gtccgtgagaaagaattgttaccaa 140  Q
    |  |||||||||||| |||||||||    
T  5288046 gctcgtgagaaagaagtgttaccaa 5288070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 24276517 - 24276397
Alignment:
Q  24 cgggtgcaccaaagctataaccaacatcaacaaaagttgtaagtctaccagtt-tccaaaccctgtcaataagctagtaaaataatcttataagtccgtg 122  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||| || | || || |||||||||||||||| |||||||||||   |||     
T  24276517 cgggtgcaccaaagctataaccaacatcaacaaaagttggaagtccaccagttgtcaagactctatcaataagctagtaaattaatcttataacctcgtt 24276418  T
Q  123 agaaagaattgttaccaacaa 143  Q
    |||||||||||||||||||||    
T  24276417 agaaagaattgttaccaacaa 24276397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 138 - 228
Target Start/End: Complemental strand, 27387481 - 27387388
Alignment:
Q  138 caacaagatcaacgatgtgtggttcaatgacttgatgatgt---acatcgagcgggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    ||||||||||||| |||||||||| |||||||||||||| |   ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27387481 caacaagatcaacaatgtgtggttgaatgacttgatgatatgttacaccgagcgggagatattcaagtcacttgatgatgttgatattattcga 27387388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 138 - 228
Target Start/End: Original strand, 45197644 - 45197736
Alignment:
Q  138 caacaagatcaacgatgtgtggttcaatgacttgatgatgta--catcgagcgggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    ||||||||||||| ||||||||||||||||||||||||| ||  |||||||| ||||||||||||||||||||| |||||||||||| |||||    
T  45197644 caacaagatcaacaatgtgtggttcaatgacttgatgatatattcatcgagcaggagatattcaagtcacttgacgatgttgatattgttcga 45197736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 138 - 228
Target Start/End: Original strand, 19399978 - 19400071
Alignment:
Q  138 caacaagatcaacgatgtgtggttcaatgacttgatgatgt---acatcgagcgggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    ||||||||||||| |||||||||| |||||||||||||| |   ||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  19399978 caacaagatcaacaatgtgtggttgaatgacttgatgatatgttacaccgagcgggagatattcaagtcgcttgatgatgttgatattattcga 19400071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 154
Target Start/End: Original strand, 25024464 - 25024599
Alignment:
Q  19 aatatcgggtgcaccaaagctataaccaacatcaacaaaagttgtaagtctaccagtttccaaaccctgtcaataagctagtaaaataatcttataagtc 118  Q
    |||| ||| |||||||||||||| |||| ||||||||||||||| ||||| |||| ||  ||| || ||| ||||||||||||||||||||||||||| |    
T  25024464 aatagcggatgcaccaaagctattaccagcatcaacaaaagttggaagtccaccaattgtcaatccatgttaataagctagtaaaataatcttataagcc 25024563  T
Q  119 cgtgagaaagaattgttaccaacaagatcaacgatg 154  Q
     | ||||| |||||||||| || || ||||||||||    
T  25024564 ggcgagaaggaattgttactaataaaatcaacgatg 25024599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 138 - 228
Target Start/End: Complemental strand, 26493889 - 26493796
Alignment:
Q  138 caacaagatcaacgatgtgtggttcaatgacttgatgatg---tacatcgagcgggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    ||||||||| ||| |||||||||| ||||||||||||||    |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  26493889 caacaagatgaacaatgtgtggttaaatgacttgatgatacgttacaccgagcgggagatattcaagtcacttgatgatgttgatattattcga 26493796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 148 - 228
Target Start/End: Original strand, 18375416 - 18375499
Alignment:
Q  148 aacgatgtgtggttcaatgacttgatgatgta---catcgagcgggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    ||||||||||||||||||||||||||||| ||   ||| ||||||||||||||||| ||||| ||| |||||||||||||||||    
T  18375416 aacgatgtgtggttcaatgacttgatgatatattacatggagcgggagatattcaaatcactagataatgttgatattattcga 18375499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 122 - 228
Target Start/End: Original strand, 8638598 - 8638707
Alignment:
Q  122 gagaaagaattgttaccaacaagatcaacgatgtgtggttcaatgacttgatgat---gtacatcgagcgggagatattcaagtcacttgatgatgttga 218  Q
    ||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||    || | ||| |  ||||||||||||||| |||||||| | ||    
T  8638598 gagaaagaattgttaccaacaagatcaacgacgtgtggtttaattacttgatgatatgttataccgaacaagagatattcaagtcatttgatgatatcga 8638697  T
Q  219 tattattcga 228  Q
    ||||||||||    
T  8638698 tattattcga 8638707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 138 - 228
Target Start/End: Complemental strand, 38575464 - 38575371
Alignment:
Q  138 caacaagatcaacgatgtgtggttcaatgacttgatgatgt---acatcgagcgggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    |||||| |||||| ||| |||||| || ||||||||||| |   ||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  38575464 caacaatatcaacaatgggtggttgaacgacttgatgatatgttacaccgagcgggagatattaaagtcacttgatgatgttgatattattcga 38575371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 125; Significance: 2e-64; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 19 - 228
Target Start/End: Original strand, 12539455 - 12539666
Alignment:
Q  19 aatatcgggtgcaccaaagctataaccaacatcaacaaaagttgtaagtctaccagtttccaaaccctgtcaataagctagtaaaataatcttataagtc 118  Q
    |||| |||||||||||||||||| |||||||||||||||||||| ||||| |||||||  ||| || || |||||||||||||||| ||||||||||| |    
T  12539455 aatagcgggtgcaccaaagctattaccaacatcaacaaaagttggaagtccaccagttatcaagccttgccaataagctagtaaaagaatcttataagcc 12539554  T
Q  119 cgtgagaaagaattgttaccaacaagatcaacgatgtgtggttcaatgacttgatg--atgtacatcgagcgggagatattcaagtcacttgatgatgtt 216  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||  ||||  | |||||   ||||||||||||||||||||||||||    
T  12539555 cgtgagaaagaattgttaccaacaagatcaacaatgcgtggttcaatgacttgatgatatgttaaccgagcataagatattcaagtcacttgatgatgtt 12539654  T
Q  217 gatattattcga 228  Q
    ||||||||||||    
T  12539655 gatattattcga 12539666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 19 - 222
Target Start/End: Complemental strand, 34317761 - 34317555
Alignment:
Q  19 aatatcgggtgcaccaaagctataaccaacatcaacaaaagttgtaagtctaccagtttccaaaccctgtcaataagctagtaaaataatcttataagtc 118  Q
    |||| |||||| ||||||||||| |||||||||||||||||||| ||||| |||||||  ||| |  ||||||||||||||||||| |||||||||| ||    
T  34317761 aatagcgggtgaaccaaagctattaccaacatcaacaaaagttggaagtccaccagttatcaagctttgtcaataagctagtaaaagaatcttataaatc 34317662  T
Q  119 cgtgagaaagaattgttaccaacaagatcaacgatgtgtggttcaatgacttgatgat---gtacatcgagcgggagatattcaagtcacttgatgatgt 215  Q
    | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    |||| ||||   |||||||||||||||||| |||||||    
T  34317661 catgagaaagaattgttaccaacaagatcaatgatgtgtggttcaatgacttgatgatatgttacaccgagtaagagatattcaagtcacttcatgatgt 34317562  T
Q  216 tgatatt 222  Q
    |||||||    
T  34317561 tgatatt 34317555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 142 - 225
Target Start/End: Complemental strand, 35649831 - 35649745
Alignment:
Q  142 aagatcaacgatgtgtggttcaatgacttgatgatgt---acatcgagcgggagatattcaagtcacttgatgatgttgatattatt 225  Q
    |||||||||||||||| |||||||||||||||||| |   ||| |||||||||||||||||||||| ||||||||||||||||||||    
T  35649831 aagatcaacgatgtgttgttcaatgacttgatgatatgttacaccgagcgggagatattcaagtcatttgatgatgttgatattatt 35649745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 228
Target Start/End: Complemental strand, 19952006 - 19951913
Alignment:
Q  138 caacaagatcaacgatgtgtggttcaatgacttgatgatgt---acatcgagcgggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    ||||||||| |||||||| |||||||||||||||| ||| |   |||  ||||| |||||||||||||||||||||||||||||||||||||||    
T  19952006 caacaagattaacgatgtatggttcaatgacttgacgatatgtcacactgagcgagagatattcaagtcacttgatgatgttgatattattcga 19951913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 228
Target Start/End: Complemental strand, 33453363 - 33453270
Alignment:
Q  138 caacaagatcaacgatgtgtggttcaatgacttgatgatgt----acatcgagcgggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    ||||||||||||||||||||||| ||||||||| || || |    ||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  33453363 caacaagatcaacgatgtgtggt-caatgacttcatcatatgtttacaccgagcgggagatatttaagtcacttgatgatgttgatattattcga 33453270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 13308759 - 13308809
Alignment:
Q  178 tacatcgagcgggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  13308759 tacaccgagcgagagatattcaagtcacttgatgatgttgatattattcga 13308809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 228
Target Start/End: Original strand, 22483549 - 22483642
Alignment:
Q  138 caacaagatcaacgatgtgtggttcaatgacttgatgatgt---acatcgagcgggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    ||||||||| ||| |||  ||||| |||||||||||||| |   ||| |||||||||||||||||| |||||||||||  ||||||||||||||    
T  22483549 caacaagattaacaatgaatggttaaatgacttgatgatatgttacaccgagcgggagatattcaaatcacttgatgacattgatattattcga 22483642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 228
Target Start/End: Original strand, 34526352 - 34526445
Alignment:
Q  138 caacaagatcaacgatgtgtggttcaatgacttgatgatgt---acatcgagcgggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    ||||||||| ||| ||| |||||| ||||| |||||||| |   ||| |||||||||||||||||| |||||||||||  ||||||||||||||    
T  34526352 caacaagattaacaatgagtggttaaatgatttgatgatatgttacaccgagcgggagatattcaaatcacttgatgacattgatattattcga 34526445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 22464670 - 22464761
Alignment:
Q  138 caacaagatcaacgatgtgtggttcaatgacttgatgatgt---acatcgagcgggagatattcaagtcacttgatgatgttgatattattc 226  Q
    ||||||||| ||| ||| |||||| ||||| |||||||| |   ||| |||||||||||||||||| |||||||||||  ||||||||||||    
T  22464670 caacaagattaacaatgagtggttaaatgatttgatgatatgttacaccgagcgggagatattcaaatcacttgatgacattgatattattc 22464761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 124; Significance: 6e-64; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 19 - 228
Target Start/End: Original strand, 3055362 - 3055575
Alignment:
Q  19 aatatcgggtgcaccaaagctataaccaacatcaacaaaa-gttgtaagtctaccagtttccaaaccctgtcaataagctagtaaaataatcttataagt 117  Q
    |||| |||||||||||||||||| | |||||||||||||  | |  ||||  |||||||  ||| || |||||||||||||||||||||||||||||||     
T  3055362 aatagcgggtgcaccaaagctattatcaacatcaacaaattggtagaagtaaaccagttatcaagccatgtcaataagctagtaaaataatcttataagc 3055461  T
Q  118 ccgtgagaaagaattgttaccaacaagatcaacgatgtgtggttcaatgacttgatgat---gtacatcgagcgggagatattcaagtcacttgatgatg 214  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||| |||||||||    
T  3055462 ccgtgagaaagaattgttaccaacatgatcaacgatgtgtggttcaatgacttgatgatatgttacatcgagcgggagatattcaagtcatttgatgatg 3055561  T
Q  215 ttgatattattcga 228  Q
    ||||||||||||||    
T  3055562 ttgatattattcga 3055575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 19 - 228
Target Start/End: Original strand, 8785664 - 8785875
Alignment:
Q  19 aatatcgggtgcaccaaagctataaccaacatcaacaaaagttgtaagtctaccagtttccaaaccctgtcaataagctagtaaaataatcttataagtc 118  Q
    |||| |||||||||||||||||| |||||||||||||||||||| ||||| || ||||  ||||||| || ||||||||||||||||||||||||||| |    
T  8785664 aatagcgggtgcaccaaagctattaccaacatcaacaaaagttggaagtccactagttatcaaaccccgttaataagctagtaaaataatcttataag-c 8785762  T
Q  119 cgtgagaaagaattgttaccaacaagatcaacgatgtgtggttcaatgacttgatgat---gtacatcgagcgggagatattcaagtcacttgatgatgt 215  Q
      ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    |||||| |||||||||||||||| ||| |||||||| |    
T  8785763 aatgagaaagaattgttaccaacaagatcaacgatgtgtggttcaatgacttgataatatattacatcaagcgggagatattcaattcagttgatgatat 8785862  T
Q  216 tgatattattcga 228  Q
    |||||||||||||    
T  8785863 tgatattattcga 8785875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 25 - 228
Target Start/End: Original strand, 11852602 - 11852808
Alignment:
Q  25 gggtgcaccaaagctataaccaacatcaacaaaagttgtaagtctaccagtttccaaaccctgtcaataagctagtaaaataatcttataagtccgtgag 124  Q
    |||||||||||| |||| || |||||||||||||||   || || | |||||  |||  |||||||||||||||||||||||||||||||||||||||||    
T  11852602 gggtgcaccaaaactattactaacatcaacaaaagtgaaaaatccatcagttgtcaagtcctgtcaataagctagtaaaataatcttataagtccgtgag 11852701  T
Q  125 aaagaattgttaccaacaagatcaacgatgtgtggttcaatgacttgatgat---gtacatcgagcgggagatattcaagtcacttgatgatgttgatat 221  Q
    |||||||| ||||||||||||| || ||||||||||||||||||||||||||    |||| ||| ||||||||||| || ||||||||||||||||||||    
T  11852702 aaagaattattaccaacaagatgaaagatgtgtggttcaatgacttgatgatatgttacaccgaacgggagatatttaactcacttgatgatgttgatat 11852801  T
Q  222 tattcga 228  Q
    |||||||    
T  11852802 tattcga 11852808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 19 - 228
Target Start/End: Complemental strand, 27169089 - 27168885
Alignment:
Q  19 aatatcgggtgcaccaaagctataaccaacatcaacaaaagttgtaagtctaccagtttccaaaccctgtcaataagctagtaaaataatcttataagtc 118  Q
    |||| |||||| ||||||||||| ||||||||||||||||| || ||||| |||||||  |||  | ||||||||||||||||||||||||||||||| |    
T  27169089 aatagcgggtgtaccaaagctattaccaacatcaacaaaagatggaagtccaccagttatcaagtcttgtcaataagctagtaaaataatcttataagcc 27168990  T
Q  119 cgtgagaaagaattgttaccaacaagatcaacgatgtgtggttcaatgacttgatgatgtacatcgagcgggagatattcaagtcacttgatgatgttga 218  Q
    | ||||||| ||||||||| ||||||||||||||||||||||||||| |  ||      |||| |||||||||||||||||||||||||||| |||||||    
T  27168989 catgagaaataattgttacaaacaagatcaacgatgtgtggttcaataatatg-----ttacaccgagcgggagatattcaagtcacttgataatgttga 27168895  T
Q  219 tattattcga 228  Q
    ||||||||||    
T  27168894 tattattcga 27168885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 83 - 225
Target Start/End: Complemental strand, 23244800 - 23244655
Alignment:
Q  83 ccctgtcaataagctagtaaaataatcttataagtccgtgagaaagaattgttaccaacaagatcaacgatgtgtggttcaatgacttgatgat---gta 179  Q
    |||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    ||    
T  23244800 ccctgtcaataagctagtaaaataatcttataagccaatgagaaagaattgttaccaacaagatcaacgatgtgtcgttcaatgacttgatgatatgtta 23244701  T
Q  180 catcgagcgggagatattcaagtcacttgatgatgttgatattatt 225  Q
      |||||||| || ||||| ||||||||||||||||||||||||||    
T  23244700 tgtcgagcggaagttattctagtcacttgatgatgttgatattatt 23244655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 142 - 228
Target Start/End: Original strand, 1280382 - 1280471
Alignment:
Q  142 aagatcaacgatgtgtggttcaatgacttgatgatgt---acatcgagcgggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    ||||||||| |||||||||||||||| |||||||| |   ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  1280382 aagatcaacaatgtgtggttcaatgatttgatgatatgttacaccgagcgggagatattcaagtcacttgatgatgttgatattattcga 1280471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 138 - 228
Target Start/End: Original strand, 203851 - 203943
Alignment:
Q  138 caacaagatcaacgatgtgtggttcaatgacttgatgatgt---acatcgagcgggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    ||||||||||||| ||||||  |  |||||||||||||| |   ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  203851 caacaagatcaacaatgtgta-taaaatgacttgatgatatgttacaccgagcgggagatattcaagtcacttgatgatgttgatattattcga 203943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 228
Target Start/End: Complemental strand, 26540830 - 26540737
Alignment:
Q  138 caacaagatcaacgatgtgtggttcaatgacttgatgatgt---acatcgagcgggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    ||||||||| ||| ||| |||||| ||||| |||||||| |   ||| |||||||||||||||||| |||||||||||  ||||||||||||||    
T  26540830 caacaagattaacaatgagtggttaaatgatttgatgatatgttacaccgagcgggagatattcaaatcacttgatgacattgatattattcga 26540737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 226
Target Start/End: Complemental strand, 22713048 - 22712983
Alignment:
Q  156 gtggttcaatgacttgatgatgtacatcgagcgggagatattcaagtcacttgatgatgttgatattattc 226  Q
    ||||||||||||||||||||| |     ||||||| |||||||| ||||||||||||||||||||||||||    
T  22713048 gtggttcaatgacttgatgatat-----gagcgggggatattcatgtcacttgatgatgttgatattattc 22712983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 22541905 - 22541979
Alignment:
Q  157 tggttcaatgacttgatgatgt---acatcgagcgggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    ||||| |||||||||||||| |   ||||||| ||| |||||||||||||||| ||||||||| |||||||||||    
T  22541905 tggttgaatgacttgatgatatgttacatcgaacggaagatattcaagtcactcgatgatgttaatattattcga 22541979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 225
Target Start/End: Original strand, 2228964 - 2229005
Alignment:
Q  184 gagcgggagatattcaagtcacttgatgatgttgatattatt 225  Q
    |||||| ||||||| |||||| ||||||||||||||||||||    
T  2228964 gagcggaagatatttaagtcatttgatgatgttgatattatt 2229005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 228
Target Start/End: Complemental strand, 19519053 - 19519024
Alignment:
Q  199 aagtcacttgatgatgttgatattattcga 228  Q
    ||||||||||||||||||||||||||||||    
T  19519053 aagtcacttgatgatgttgatattattcga 19519024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 121; Significance: 4e-62; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 26 - 226
Target Start/End: Complemental strand, 3857163 - 3856960
Alignment:
Q  26 ggtgcaccaaagctataaccaacatcaacaaaagttgtaagtctaccagtttccaaaccctgtcaataagctagtaaaataatcttataagtccgtgaga 125  Q
    |||||||||||||||| || ||||||||||||||||| ||||| |||||||  ||| |||||||||||||||||||||||||||||||||| ||||||||    
T  3857163 ggtgcaccaaagctattacgaacatcaacaaaagttggaagtccaccagttatcaagccctgtcaataagctagtaaaataatcttataagcccgtgaga 3857064  T
Q  126 aagaattgttaccaacaagatcaacgatgtgtggttcaatgacttgatg--atg-tacatcgagcgggagatattcaagtcacttgatgatgttgatatt 222  Q
    || ||||||||||| ||||||||||||||||||||| ||||||||||||  ||| |||   ||| ||||||||||||||||| |||||||||||||||||    
T  3857063 aataattgttaccatcaagatcaacgatgtgtggttaaatgacttgatgacatgttactcagagtgggagatattcaagtcatttgatgatgttgatatt 3856964  T
Q  223 attc 226  Q
    ||||    
T  3856963 attc 3856960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 26 - 228
Target Start/End: Original strand, 51261867 - 51262072
Alignment:
Q  26 ggtgcaccaaagctataaccaacatcaacaaaagttgtaagtctaccagtttccaaaccctgtcaataagctagtaaaataatcttataagtccgtgaga 125  Q
    |||||| ||||||||| |||||||||||||||||||| ||||| |||||||  |||||||||||||||||||||||||||||| | |||||  ||||| |    
T  51261867 ggtgcatcaaagctattaccaacatcaacaaaagttggaagtccaccagttgtcaaaccctgtcaataagctagtaaaataatataataagctcgtgaaa 51261966  T
Q  126 aagaattgttaccaacaagatcaacgatgtgtggttcaatgacttgatgat---gtacatcgagcgggagatattcaagtcacttgatgatgttgatatt 222  Q
    ||||||||||||||||||||||||||| ||||||| |||||| ||||||||    ||||   ||||| ||||||||||||||||||||||||||||||||    
T  51261967 aagaattgttaccaacaagatcaacgaagtgtggtacaatgaattgatgatatgttacactaagcggaagatattcaagtcacttgatgatgttgatatt 51262066  T
Q  223 attcga 228  Q
    ||||||    
T  51262067 attcga 51262072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 33 - 228
Target Start/End: Original strand, 15667868 - 15668066
Alignment:
Q  33 caaagctataaccaacatcaacaaaagttgtaagtctaccagtttccaaaccctgtcaataagctagtaaaataatcttataagtccgtgagaaagaatt 132  Q
    |||| |||| |||||||||||||||||||| ||||| || ||||  ||| |||| ||||||||| ||||||||||||||||||  || ||||||||||||    
T  15667868 caaacctattaccaacatcaacaaaagttggaagtccactagttatcaagccctatcaataagcaagtaaaataatcttataaacccatgagaaagaatt 15667967  T
Q  133 gttaccaacaagatcaacgatgtgtggttcaatgacttgatgat---gtacatcgagcgggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||    || | ||||||||||||||||||||||||||||||||||||||||||||||    
T  15667968 gttaccaacaagatcaaggatgtgtggttcaataacttgatgatatgttataccgagcgggagatattcaagtcacttgatgatgttgatattattcga 15668066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 138 - 228
Target Start/End: Original strand, 43137127 - 43137220
Alignment:
Q  138 caacaagatcaacgatgtgtggttcaatgacttgatgatgt---acatcgagcgggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    |||||||||||||||||| |||||||||||||||||||| |   ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  43137127 caacaagatcaacgatgtatggttcaatgacttgatgatatgttacaccgagcgggagatattcaagtcacttgatgatgttgatattattcga 43137220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 138 - 228
Target Start/End: Original strand, 31989029 - 31989122
Alignment:
Q  138 caacaagatcaacgatgtgtggttcaatgacttgatgatgt---acatcgagcgggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    ||||||||||||| |||||||||| |||||||||||||| |   ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  31989029 caacaagatcaacaatgtgtggttgaatgacttgatgatatgttacaccgagcgggagatattcaagtcacttgatgatgttgatattattcga 31989122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 138 - 228
Target Start/End: Original strand, 53710398 - 53710491
Alignment:
Q  138 caacaagatcaacgatgtgtggttcaatgacttgatgatgt---acatcgagcgggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    ||||||||||||| |||  ||||| |||||||||||||| |   ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  53710398 caacaagatcaacaatggatggttgaatgacttgatgatctgttacaccgagcgggagatattcaagtcacttgatgatgttgatattattcga 53710491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 138 - 228
Target Start/End: Complemental strand, 24908568 - 24908475
Alignment:
Q  138 caacaagatcaacgatgtgtggttcaatgacttgatgatgt---acatcgagcgggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    ||||||||||||| |||||||||| |||||||||||||| |   ||| | ||| ||||||||||||||| ||||| ||||||||||||||||||    
T  24908568 caacaagatcaacaatgtgtggttgaatgacttgatgatatgttacaccaagcaggagatattcaagtcgcttgaagatgttgatattattcga 24908475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 228
Target Start/End: Complemental strand, 37382044 - 37381951
Alignment:
Q  138 caacaagatcaacgatgtgtggttcaatgacttgatgatgta---catcgagcgggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    |||||||||||||||||||||||| ||||||| |||||| ||   ||  ||||  ||||||||||||||| ||||||||||| |||||||||||    
T  37382044 caacaagatcaacgatgtgtggttaaatgactcgatgatatattacactgagcatgagatattcaagtcatttgatgatgtttatattattcga 37381951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 43585836 - 43585908
Alignment:
Q  157 tggttcaatgacttgatgatgt---acatcgagcgggagatattcaagtcacttgatgatgttgatattattc 226  Q
    ||||| |||||||||||||| |   ||| |||||||||||||| ||||| |||||| |||||| |||||||||    
T  43585836 tggttgaatgacttgatgatatgttacaccgagcgggagatatccaagttacttgacgatgttaatattattc 43585908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 121; Significance: 4e-62; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 27 - 226
Target Start/End: Complemental strand, 48606898 - 48606696
Alignment:
Q  27 gtgcaccaaagctataaccaacatcaacaaaagttgtaagtctaccagtttccaaaccctgtcaataagctagtaaaataatcttataagtccgtgagaa 126  Q
    ||||||||||||||| ||||| |||||||||||||| ||||| || ||||  |||||||||||||||  ||||||||||||||||||| || |||| |||    
T  48606898 gtgcaccaaagctattaccaaaatcaacaaaagttggaagtccactagttatcaaaccctgtcaatattctagtaaaataatcttatatgttcgtgggaa 48606799  T
Q  127 agaattgttaccaacaagatcaacgatgtgtggttcaatgacttgatgat---gtacatcgagcgggagatattcaagtcacttgatgatgttgatatta 223  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||    |||| |||||||||||||||||||| ||||||| ||||||||||||    
T  48606798 agaattgctaccaacaagatcaacgatgtgtggttcaatgacttgatgatatgttacaccgagcgggagatattcaagtaacttgataatgttgatatta 48606699  T
Q  224 ttc 226  Q
    |||    
T  48606698 ttc 48606696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 19 - 228
Target Start/End: Complemental strand, 30559299 - 30559087
Alignment:
Q  19 aatatcgggtgcaccaaagctataaccaacatcaacaaaagttgtaagtctaccagtttccaaaccctgtcaataagctagtaaaataatcttataagtc 118  Q
    |||| |||||||||||||||||| |||||||||||||||||||| ||||| ||| |||  ||| |  ||||||||||||||||||||| |||||||||      
T  30559299 aatagcgggtgcaccaaagctattaccaacatcaacaaaagttgaaagtccaccggttgtcaagctttgtcaataagctagtaaaatattcttataagct 30559200  T
Q  119 cgtgagaaagaattgttaccaacaagatcaacgatgtgtggttcaatgacttgatgat---gtacatcgagcgggagatattcaagtcacttgatgatgt 215  Q
    || ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    |||| |||||| |||||||||||||||||||||||||     
T  30559199 cgcgagaaagaattgttatcaacaagatcaacgatgtgtggttctatgacttgatgatatgttacaccgagcgagagatattcaagtcacttgatgatgc 30559100  T
Q  216 tgatattattcga 228  Q
    |||||||||||||    
T  30559099 tgatattattcga 30559087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 19 - 228
Target Start/End: Original strand, 14498779 - 14498990
Alignment:
Q  19 aatatcgggtgcaccaaagctataaccaacatcaacaaaagttgtaagtctaccagtttccaaaccctgtcaataagctagtaaaataatcttataagtc 118  Q
    |||| |||||| ||||||||||| | |||||||||||||||||| ||||  ||||||   ||| || |||||||||||||||||||||||||||||||      
T  14498779 aatagcgggtgtaccaaagctattatcaacatcaacaaaagttggaagtacaccagtcatcaagccatgtcaataagctagtaaaataatcttataagct 14498878  T
Q  119 cgtgagaaagaattgttaccaacaagatcaacgatgtgtggttcaatgacttgatgat---gtacatcgagcgggagatattcaagtcacttgatgatgt 215  Q
    ||||||||||| |||||||||||| |||||||||| ||||| ||||||||||||||||    ||||||||||||||||||||||||||| ||||||||||    
T  14498879 cgtgagaaagatttgttaccaacatgatcaacgatttgtgg-tcaatgacttgatgatatcttacatcgagcgggagatattcaagtcatttgatgatgt 14498977  T
Q  216 tgatattattcga 228  Q
    |||||||||||||    
T  14498978 tgatattattcga 14498990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 9637003 - 9637211
Alignment:
Q  19 aatatcgggtgcaccaaagctataaccaacatcaacaaaagttgtaagtctaccagtttccaaaccctgtcaataagctagtaaaataatcttataagtc 118  Q
    |||| ||||||||||||||| || || ||||||||||||||||| ||||| ||| |||   || ||||| ||||||||||||||| |||||||||||||     
T  9637003 aatagcgggtgcaccaaagccattactaacatcaacaaaagttgaaagtccaccggttataaagccctgccaataagctagtaaa-taatcttataagtt 9637101  T
Q  119 cgtgagaaagaattgttaccaacaagatcaacgatgtgtggttcaatgacttgatgat---gtacatcgagcgggagatattcaagtcacttgatgatgt 215  Q
    ||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||    |||| |||||||| ||||||||||||||||||||||||    
T  9637102 cgtgagaaataattgttaccaacaagatcaatgatgcgtggttcaatgacttgatgatatgttacaccgagcgggtgatattcaagtcacttgatgatgt 9637201  T
Q  216 tgatattatt 225  Q
    ||||||||||    
T  9637202 tgatattatt 9637211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 98 - 228
Target Start/End: Complemental strand, 52754032 - 52753899
Alignment:
Q  98 agtaaaataatcttataagtccgtgagaaagaattgttaccaacaagatcaacgatgtgtggttcaatgacttgatgat---gtacatcgagcgggagat 194  Q
    ||||||||||||||||||| | ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||    |||||||| ||||||||    
T  52754032 agtaaaataatcttataagcctgtgagaaagaattattaccaacatgatcaacgatgtgtggttcaatgacttgatgatatgttacatcgaacgggagat 52753933  T
Q  195 attcaagtcacttgatgatgttgatattattcga 228  Q
    |||||||||| |||||||||||||||||||||||    
T  52753932 attcaagtcatttgatgatgttgatattattcga 52753899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 123 - 228
Target Start/End: Original strand, 25017371 - 25017479
Alignment:
Q  123 agaaagaattgttaccaacaagatcaacgatgtgtggttcaatgacttgatgat---gtacatcgagcgggagatattcaagtcacttgatgatgttgat 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||| |||||| ||||||||||| ||||||||||||||||||    
T  25017371 agaaagaattgttaccaacaagatcaacgatgtgtggttcaatgacttgatgatatcttacaccgagcgagagatattcaaatcacttgatgatgttgat 25017470  T
Q  220 attattcga 228  Q
    |||||||||    
T  25017471 attattcga 25017479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 32380043 - 32379937
Alignment:
Q  122 gagaaagaattgttaccaacaagatcaacgatgtgtggttcaatgacttgatgatg-tacatcgagcgggagatattcaagtcacttgatgatgttgata 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| | | |||||||||||||| |||||||||||||||||||    
T  32380043 gagaaagaattgttaccaacaagatcaacgatgtgtggttcaatgacttgat-atgttacaccaaacgggagatattcaattcacttgatgatgttgata 32379945  T
Q  221 ttattcga 228  Q
    ||||||||    
T  32379944 ttattcga 32379937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 123 - 228
Target Start/End: Complemental strand, 40864909 - 40864801
Alignment:
Q  123 agaaagaattgttaccaacaagatcaacgatgtgtggttcaatgacttgatgat---gtacatcgagcgggagatattcaagtcacttgatgatgttgat 219  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    |||| ||| || | ||||||||||||||||||| ||||||||    
T  40864909 agaaataattgttaccaacaagatcaacgatgtgtggttcaatgacttgatgatatcttacaccgaacgagggatattcaagtcacttgataatgttgat 40864810  T
Q  220 attattcga 228  Q
    |||||||||    
T  40864809 attattcga 40864801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 138 - 228
Target Start/End: Original strand, 17127439 - 17127532
Alignment:
Q  138 caacaagatcaacgatgtgtggttcaatgacttgatgatgt---acatcgagcgggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    ||||||||||||| |||||||||| |||||||||||||| |   ||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  17127439 caacaagatcaacaatgtgtggttgaatgacttgatgatatgttacaccgagcgggagatattcaagtcgcttgatgatgttgatattattcga 17127532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 228
Target Start/End: Complemental strand, 26273104 - 26273011
Alignment:
Q  138 caacaagatcaacgatgtgtggttcaatgacttgatgatgt---acatcgagcgggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    |||||| ||||||||||||| ||||||||| |||||||| |   ||||||||| ||||||||||||||||| |||||||||| |||||||||||    
T  26273104 caacaaaatcaacgatgtgttgttcaatgatttgatgatatgttacatcgagcaggagatattcaagtcacgtgatgatgttaatattattcga 26273011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 35949110 - 35949060
Alignment:
Q  178 tacatcgagcgggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  35949110 tacaccgagcgggagatattcaagtcacttgatgatgttgatgttattcga 35949060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 30054770 - 30054839
Alignment:
Q  43 accaacatcaacaaaagttgtaagtctaccagtttccaaaccctgtcaataagctagtaaaataatctta 112  Q
    |||||||||||||||||||| ||||| ||| |||  ||| ||||  ||||||||||||||||||||||||    
T  30054770 accaacatcaacaaaagttggaagtccaccggttgtcaagccctaccaataagctagtaaaataatctta 30054839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 228
Target Start/End: Complemental strand, 21973963 - 21973870
Alignment:
Q  138 caacaagatcaacgatgtgtggttcaatgacttgatgatgt---acatcgagcgggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    ||||||||| ||| ||| |||||| ||||| |||||||| |   |||  ||||||||||||||||| |||||||||||  ||||||||||||||    
T  21973963 caacaagattaacaatgagtggttaaatgatttgatgatatgttacactgagcgggagatattcaaatcacttgatgacattgatattattcga 21973870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 30054864 - 30054914
Alignment:
Q  178 tacatcgagcgggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    |||| |||||||||||||||||||||||||||| || |||| |||||||||    
T  30054864 tacaccgagcgggagatattcaagtcacttgatcatattgacattattcga 30054914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 52754078 - 52754030
Alignment:
Q  19 aatatcgggtgcaccaaagctataaccaacatcaacaaaagttgtaagt 67  Q
    |||| |||||||||||||||||| | |||||| ||||||||||| ||||    
T  52754078 aatagcgggtgcaccaaagctattatcaacattaacaaaagttgaaagt 52754030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 115; Significance: 2e-58; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 19 - 228
Target Start/End: Complemental strand, 12180819 - 12180607
Alignment:
Q  19 aatatcgggtgcaccaaagctataaccaacatcaacaaaagttgtaagtctaccagtttccaaaccctgtcaataagctagtaaaataatcttataagtc 118  Q
    |||| ||||||| |||||| ||| || ||||||||||||||||| ||||| | |||||  ||| ||||||||||||||| |||||||||||||||||| |    
T  12180819 aatagcgggtgcgccaaagttattacaaacatcaacaaaagttgaaagtccatcagttatcaagccctgtcaataagctggtaaaataatcttataagcc 12180720  T
Q  119 cgtgagaaagaattgttaccaacaagatcaacgatgtgtggttcaatgacttgatgat---gtacatcgagcgggagatattcaagtcacttgatgatgt 215  Q
    ||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||    |||| |||| |||||| ||||||||||||||||| |||    
T  12180719 cgtgagaaaaaattgttaccaacaagatcaacattgtgtggttcaatgacttgatgatatgttacaccgagtgggagaaattcaagtcacttgatgttgt 12180620  T
Q  216 tgatattattcga 228  Q
    |||||||||||||    
T  12180619 tgatattattcga 12180607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 16 - 222
Target Start/End: Original strand, 11970838 - 11971047
Alignment:
Q  16 aaaaatatcgggtgcaccaaagctataaccaacatcaacaaaagttgtaagtctaccagtttccaaaccctgtcaataagctagtaaaataatcttataa 115  Q
    ||||||| |||||||| ||||||||| |||||||||| |||||||   ||||| || ||||  |||||||  || |||| ||||||||||||| ||||||    
T  11970838 aaaaatagcgggtgcagcaaagctattaccaacatcagcaaaagtatgaagtccactagttgtcaaaccccatctataatctagtaaaataattttataa 11970937  T
Q  116 gtccgtgagaaagaattgttaccaacaagatcaacgatgtgtggttcaatgacttgatgat---gtacatcgagcgggagatattcaagtcacttgatga 212  Q
    ||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||    |||| ||||||| ||||||||||||||||||||||    
T  11970938 gtatgtgagaaagaattgttaccaataagatcaacgatgtgtggttcaatgacttgatcatatgttacaccgagcggaagatattcaagtcacttgatga 11971037  T
Q  213 tgttgatatt 222  Q
    ||||||||||    
T  11971038 tgttgatatt 11971047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 228
Target Start/End: Original strand, 24074412 - 24074505
Alignment:
Q  138 caacaagatcaacgatgtgtggttcaatgacttgatgatgt---acatcgagcgggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    ||||||||||||| |||||||||  |||||||||||||| |   ||| |||| ||||||||||||||| |||||||||||||||||||||||||    
T  24074412 caacaagatcaacaatgtgtggtaaaatgacttgatgatatgttacaccgagggggagatattcaagttacttgatgatgttgatattattcga 24074505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 145 - 228
Target Start/End: Original strand, 25599159 - 25599245
Alignment:
Q  145 atcaacgatgtgtggttcaatgacttgatg--atgt-acatcgagcgggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    |||||||| ||| |||||||||||||||||  |||| |||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  25599159 atcaacgacgtgcggttcaatgacttgatggtatgttacatcgagtgggagataatcaagtcacttgatgatgttgatattattcga 25599245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 226
Target Start/End: Original strand, 3050894 - 3050954
Alignment:
Q  167 acttgatgatgt-acatcgagcgggagatattcaagtcacttgatgatgttgatattattc 226  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3050894 acttgatgatgttacaccgagcgggagatattcaagtcacttgatgatgttgatattattc 3050954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 228
Target Start/End: Original strand, 25340428 - 25340538
Alignment:
Q  121 tgagaaagaattgttaccaacaagatcaacgatgtgtggttcaatgacttgatgatgt---acatcgagcgggagatattcaagtcacttgatgatgttg 217  Q
    ||||||| || || ||||||||||||||| |||||||| || | ||| |||||||| |   ||| | || || ||||||| |||||||||||||||||||    
T  25340428 tgagaaataagtgctaccaacaagatcaatgatgtgtgattaagtgatttgatgatatgttacacccagtggaagatatttaagtcacttgatgatgttg 25340527  T
Q  218 atattattcga 228  Q
    |||||||||||    
T  25340528 atattattcga 25340538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 188 - 228
Target Start/End: Original strand, 30621226 - 30621266
Alignment:
Q  188 gggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  30621226 gggagataatcaagtcacttgatgatgttgatattattcga 30621266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 228
Target Start/End: Complemental strand, 32442146 - 32442056
Alignment:
Q  138 caacaagatcaacgatgtgtggttcaatgacttgatgat---gtacatcgagcgggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    ||||| ||| ||||||||||||||||||||||| |||||    |||||||||||| ||||| |  | |||||||||||||||||||||||||||    
T  32442146 caacatgattaacgatgtgtggttcaatgactt-atgatatgttacatcgagcggaagataat--aatcacttgatgatgttgatattattcga 32442056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 226
Target Start/End: Original strand, 1296557 - 1296600
Alignment:
Q  183 cgagcgggagatattcaagtcacttgatgatgttgatattattc 226  Q
    ||||||||||||||||||||||||||||||| || |||||||||    
T  1296557 cgagcgggagatattcaagtcacttgatgatattaatattattc 1296600  T

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Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 8035535 - 8035493
Alignment:
Q  26 ggtgcaccaaagctataaccaacatcaacaaaagttgtaagtc 68  Q
    |||||||||||||||| |||||||||||||||||||| |||||    
T  8035535 ggtgcaccaaagctattaccaacatcaacaaaagttggaagtc 8035493  T

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Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 140
Target Start/End: Complemental strand, 8035480 - 8035438
Alignment:
Q  98 agtaaaataatcttataagtccgtgagaaagaattgttaccaa 140  Q
    ||||||||||||||||| |  ||||||||||||||||||||||    
T  8035480 agtaaaataatcttatatgctcgtgagaaagaattgttaccaa 8035438  T

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Target: scaffold0002 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 51 - 225
Target Start/End: Complemental strand, 435617 - 435435
Alignment:
Q  51 caacaaaagttgtaagtctaccagtttccaaaccctgtcaataagctagtaaaataatcttataagtccgtgagaaagaattgttaccaacaagatcaac 150  Q
    |||||||||||  ||||| |||||||  ||| || |||||||||| ||||||||||||||||||||  ||||||||| |||||||||||||||||||||     
T  435617 caacaaaagttcgaagtccaccagttgtcaacccatgtcaataagttagtaaaataatcttataagctcgtgagaaaaaattgttaccaacaagatcaat 435518  T
Q  151 gatgtgtggttcaatgacttgatgat--------gtacatcgagcgggagatattcaagtcacttgatgatgttgatattatt 225  Q
     |||||||| ||||||||||||||||         |||| ||||||| |||||||||||||||||||| ||||||||||||||    
T  435517 aatgtgtggctcaatgacttgatgatatgatatgttacaccgagcggaagatattcaagtcacttgattatgttgatattatt 435435  T

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Target: scaffold0019 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 138 - 228
Target Start/End: Complemental strand, 135029 - 134936
Alignment:
Q  138 caacaagatcaacgatgtgtggttcaatgacttgatgatgt---acatcgagcgggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    ||||||||| ||| |||||||||| |||||||||||||| |   ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  135029 caacaagatgaacaatgtgtggttaaatgacttgatgatatgttacaccgagcgggagatattcaagtcacttgatgatgttgatattattcga 134936  T

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Target: scaffold0007 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 138 - 228
Target Start/End: Original strand, 259918 - 260011
Alignment:
Q  138 caacaagatcaacgatgtgtggttcaatgacttgatgatgt---acatcgagcgggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    ||||||||||||| ||| ||||||||||||||||||||| |   ||||||||||||| ||||||||||||||||||||  ||||||||||||||    
T  259918 caacaagatcaacaatgagtggttcaatgacttgatgatatgttacatcgagcgggatatattcaagtcacttgatgacattgatattattcga 260011  T

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Target: scaffold0015 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 228
Target Start/End: Complemental strand, 214336 - 214243
Alignment:
Q  138 caacaagatcaacgatgtgtggttcaatgacttgatgatgt---acatcgagcgggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    ||||||||||||| || ||||||| |||||||||||||| |   ||| ||||| |||||||||| |||||||||||||||||||||||||||||    
T  214336 caacaagatcaacaatatgtggttgaatgacttgatgatatgttacaccgagcaggagatattcgagtcacttgatgatgttgatattattcga 214243  T

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Target: scaffold0198 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 1439 - 1489
Alignment:
Q  178 tacatcgagcgggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  1439 tacaccgagcgggagatattcaaatcacttgatgatgttgatattattcga 1489  T

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Target: scaffold0168 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 228
Target Start/End: Original strand, 15814 - 15907
Alignment:
Q  138 caacaagatcaacgatgtgtggttcaatgacttgatgatgt---acatcgagcgggagatattcaagtcacttgatgatgttgatattattcga 228  Q
    ||||||||| ||| ||| |||||| ||||| |||||||| |   ||| |||||||||||||||||| |||||||||||  ||||||||||||||    
T  15814 caacaagattaacaatgagtggttaaatgatttgatgatatgttacaccgagcgggagatattcaaatcacttgatgacattgatattattcga 15907  T

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Target: scaffold0012 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 197105 - 197196
Alignment:
Q  138 caacaagatcaacgatgtgtggttcaatgacttgatgatgt---acatcgagcgggagatattcaagtcacttgatgatgttgatattattc 226  Q
    ||||||||| ||| ||| |||||| ||||| |||||||| |   ||| |||||||||||||||||| |||||||||||  ||||||||||||    
T  197105 caacaagattaacaatgagtggttaaatgaattgatgatatgttacaccgagcgggagatattcaaatcacttgatgacattgatattattc 197196  T

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