View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0759_low_25 (Length: 401)

Name: NF0759_low_25
Description: NF0759
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0759_low_25
NF0759_low_25
[»] chr6 (73 HSPs)
chr6 (1-298)||(30729096-30729372)
chr6 (8-302)||(15532945-15533239)
chr6 (27-302)||(15541404-15541679)
chr6 (113-302)||(8995341-8995529)
chr6 (113-302)||(9019788-9019976)
chr6 (26-302)||(19227672-19227949)
chr6 (154-302)||(1072141-1072289)
chr6 (107-292)||(11983303-11983487)
chr6 (115-302)||(14507439-14507626)
chr6 (154-296)||(32279899-32280040)
chr6 (110-304)||(15530384-15530578)
chr6 (228-305)||(17852518-17852595)
chr6 (1-143)||(13883102-13883244)
chr6 (1-143)||(31249127-31249269)
chr6 (1-143)||(35201739-35201881)
chr6 (227-303)||(15346366-15346442)
chr6 (231-302)||(13057173-13057244)
chr6 (231-302)||(24338712-24338783)
chr6 (231-302)||(32447580-32447651)
chr6 (228-302)||(12195779-12195853)
chr6 (1-102)||(35209015-35209116)
chr6 (227-302)||(25466434-25466509)
chr6 (227-302)||(3390354-3390429)
chr6 (231-302)||(13039733-13039804)
chr6 (231-302)||(25477253-25477324)
chr6 (229-302)||(1230513-1230586)
chr6 (1-50)||(26066588-26066637)
chr6 (229-302)||(28241585-28241658)
chr6 (1-50)||(33310928-33310977)
chr6 (27-197)||(26642829-26642998)
chr6 (27-197)||(26748795-26748964)
chr6 (231-294)||(3234003-3234065)
chr6 (233-302)||(3632202-3632271)
chr6 (238-302)||(14459029-14459093)
chr6 (27-75)||(15530613-15530661)
chr6 (131-231)||(24192630-24192730)
chr6 (231-302)||(14466312-14466383)
chr6 (190-273)||(16455717-16455800)
chr6 (25-102)||(1230692-1230769)
chr6 (227-273)||(3028143-3028189)
chr6 (227-269)||(11138278-11138320)
chr6 (204-273)||(4816538-4816607)
chr6 (26-102)||(17695307-17695383)
chr6 (231-296)||(22490618-22490683)
chr6 (26-102)||(26064755-26064831)
chr6 (26-102)||(26084724-26084800)
chr6 (27-99)||(28241788-28241860)
chr6 (27-75)||(1072347-1072395)
chr6 (231-291)||(3630139-3630199)
chr6 (27-75)||(8995255-8995303)
chr6 (27-75)||(9019702-9019750)
chr6 (205-302)||(12186331-12186431)
chr6 (204-260)||(20915664-20915720)
chr6 (131-231)||(24191533-24191633)
chr6 (27-75)||(24191620-24191668)
chr6 (27-75)||(24192717-24192765)
chr6 (27-102)||(26887679-26887754)
chr6 (27-102)||(30975153-30975228)
chr6 (27-102)||(30981592-30981667)
chr6 (27-102)||(30987756-30987831)
chr6 (231-302)||(12161819-12161889)
chr6 (237-288)||(17012029-17012080)
chr6 (113-211)||(26068699-26068796)
chr6 (110-211)||(4816623-4816723)
chr6 (204-273)||(26068592-26068661)
chr6 (113-174)||(29755132-29755193)
chr6 (113-174)||(33308771-33308832)
chr6 (113-174)||(33311040-33311101)
chr6 (231-279)||(10584105-10584153)
chr6 (215-283)||(12937478-12937549)
chr6 (238-302)||(13870686-13870749)
chr6 (205-273)||(26066321-26066389)
chr6 (228-260)||(30034913-30034945)
[»] chr3 (124 HSPs)
chr3 (27-302)||(45882659-45882934)
chr3 (1-304)||(10956287-10956589)
chr3 (27-302)||(18162405-18162658)
chr3 (131-302)||(3859352-3859523)
chr3 (110-302)||(32264301-32264497)
chr3 (110-302)||(22114567-22114759)
chr3 (110-302)||(1321244-1321436)
chr3 (110-302)||(5522877-5523069)
chr3 (120-304)||(10958583-10958767)
chr3 (154-302)||(11162997-11163145)
chr3 (110-304)||(18099430-18099624)
chr3 (114-289)||(24177086-24177261)
chr3 (154-302)||(11170251-11170399)
chr3 (154-294)||(48361940-48362080)
chr3 (26-302)||(26720267-26720543)
chr3 (110-302)||(5191456-5191648)
chr3 (154-302)||(24979554-24979702)
chr3 (154-296)||(32218942-32219084)
chr3 (194-304)||(15780747-15780857)
chr3 (171-304)||(18097160-18097294)
chr3 (154-302)||(35777269-35777416)
chr3 (154-273)||(10084684-10084803)
chr3 (154-273)||(10191604-10191723)
chr3 (189-302)||(12268228-12268341)
chr3 (1-144)||(10595424-10595567)
chr3 (1-302)||(4308543-4308844)
chr3 (180-294)||(23633332-23633447)
chr3 (228-294)||(1313331-1313397)
chr3 (26-142)||(10949694-10949811)
chr3 (1-102)||(47878606-47878707)
chr3 (1-102)||(54192871-54192972)
chr3 (237-302)||(6561740-6561805)
chr3 (1-102)||(35918411-35918512)
chr3 (227-296)||(53597161-53597229)
chr3 (228-305)||(53915755-53915832)
chr3 (231-302)||(1626945-1627016)
chr3 (231-302)||(3314608-3314679)
chr3 (231-302)||(5927026-5927097)
chr3 (227-302)||(28761690-28761765)
chr3 (1-102)||(16461827-16461928)
chr3 (231-304)||(890031-890104)
chr3 (154-302)||(6066058-6066206)
chr3 (27-166)||(11079169-11079309)
chr3 (228-305)||(53917923-53918000)
chr3 (3-71)||(11170121-11170189)
chr3 (232-304)||(27635887-27635959)
chr3 (27-165)||(27762418-27762557)
chr3 (27-197)||(47883242-47883412)
chr3 (1-143)||(10094482-10094624)
chr3 (231-302)||(28137557-28137628)
chr3 (231-302)||(47701857-47701928)
chr3 (1-102)||(10201409-10201510)
chr3 (26-165)||(20031742-20031883)
chr3 (228-302)||(51943292-51943366)
chr3 (231-304)||(880712-880785)
chr3 (1-226)||(5899431-5899657)
chr3 (204-302)||(6063708-6063808)
chr3 (1-50)||(7606940-7606989)
chr3 (229-302)||(51727268-51727341)
chr3 (231-304)||(53468715-53468788)
chr3 (26-144)||(5858196-5858314)
chr3 (154-226)||(6719471-6719543)
chr3 (1-49)||(10901372-10901420)
chr3 (154-226)||(38889864-38889936)
chr3 (1-49)||(43228006-43228054)
chr3 (180-302)||(23636899-23637022)
chr3 (231-302)||(28100303-28100374)
chr3 (231-302)||(43423725-43423796)
chr3 (232-302)||(3306724-3306794)
chr3 (232-294)||(6231374-6231436)
chr3 (229-295)||(6484307-6484373)
chr3 (26-143)||(10208414-10208531)
chr3 (10-75)||(18097374-18097439)
chr3 (231-289)||(28180948-28181006)
chr3 (232-302)||(43421677-43421747)
chr3 (232-302)||(51675017-51675087)
chr3 (228-302)||(455824-455902)
chr3 (228-302)||(458201-458279)
chr3 (1-50)||(6063983-6064032)
chr3 (204-273)||(6719402-6719471)
chr3 (227-296)||(13420440-13420509)
chr3 (25-74)||(32218834-32218883)
chr3 (229-302)||(35918211-35918284)
chr3 (204-257)||(38889936-38889989)
chr3 (229-302)||(43226008-43226081)
chr3 (229-301)||(39715392-39715463)
chr3 (26-104)||(25690816-25690894)
chr3 (231-302)||(28102264-28102335)
chr3 (231-294)||(36011751-36011814)
chr3 (231-302)||(53591119-53591190)
chr3 (28-102)||(54188160-54188234)
chr3 (204-262)||(5886182-5886240)
chr3 (204-262)||(5899657-5899715)
chr3 (61-143)||(10100505-10100587)
chr3 (204-302)||(50493896-50493994)
chr3 (228-302)||(4104157-4104235)
chr3 (16-73)||(11162880-11162937)
chr3 (113-226)||(25388683-25388795)
chr3 (231-302)||(31151271-31151344)
chr3 (229-302)||(43228213-43228286)
chr3 (51-95)||(13511619-13511663)
chr3 (204-260)||(25388795-25388851)
chr3 (27-75)||(32264532-32264580)
chr3 (27-75)||(48362138-48362186)
chr3 (27-102)||(51727468-51727543)
chr3 (227-281)||(1673895-1673950)
chr3 (204-259)||(13893290-13893345)
chr3 (27-73)||(1321161-1321207)
chr3 (227-273)||(1618949-1618995)
chr3 (112-226)||(5886069-5886182)
chr3 (228-273)||(746672-746717)
chr3 (227-292)||(4560537-4560602)
chr3 (231-268)||(4663843-4663880)
chr3 (228-273)||(10621833-10621878)
chr3 (228-273)||(11007966-11008011)
chr3 (228-273)||(25533355-25533400)
chr3 (204-261)||(46966938-46966995)
chr3 (204-285)||(53896475-53896556)
chr3 (182-261)||(26762839-26762919)
chr3 (27-102)||(29914409-29914484)
chr3 (27-102)||(29963562-29963637)
chr3 (204-260)||(38210265-38210321)
chr3 (27-102)||(43225827-43225902)
chr3 (231-279)||(54691858-54691906)
[»] scaffold0339 (1 HSPs)
scaffold0339 (28-302)||(3747-4021)
[»] chr4 (99 HSPs)
chr4 (28-302)||(47274522-47274796)
chr4 (26-304)||(48486112-48486390)
chr4 (1-302)||(36919849-36920151)
chr4 (110-304)||(22802996-22803189)
chr4 (1-302)||(22044654-22044956)
chr4 (110-273)||(36921788-36921951)
chr4 (110-296)||(619717-619903)
chr4 (122-302)||(5198309-5198489)
chr4 (1-302)||(9174410-9174710)
chr4 (114-302)||(24878870-24879058)
chr4 (110-302)||(24880328-24880520)
chr4 (154-305)||(22801123-22801273)
chr4 (112-302)||(51015125-51015315)
chr4 (131-302)||(40091679-40091850)
chr4 (113-302)||(31849863-31850052)
chr4 (110-302)||(24888673-24888865)
chr4 (110-273)||(38409076-38409239)
chr4 (132-302)||(52942710-52942881)
chr4 (154-302)||(11434876-11435024)
chr4 (110-264)||(3824875-3825029)
chr4 (120-304)||(37089633-37089820)
chr4 (1-261)||(11006546-11006807)
chr4 (153-302)||(7941239-7941390)
chr4 (110-273)||(5637762-5637924)
chr4 (133-302)||(8756513-8756683)
chr4 (137-302)||(22046949-22047113)
chr4 (171-302)||(9148190-9148322)
chr4 (27-128)||(16631068-16631169)
chr4 (8-96)||(16638530-16638618)
chr4 (1-102)||(4884505-4884606)
chr4 (231-305)||(19095880-19095954)
chr4 (237-302)||(19322701-19322766)
chr4 (231-302)||(18537734-18537806)
chr4 (187-302)||(36378246-36378361)
chr4 (112-211)||(9176851-9176950)
chr4 (103-226)||(11008932-11009055)
chr4 (231-302)||(24446843-24446914)
chr4 (232-302)||(37313330-37313400)
chr4 (228-305)||(5100992-5101069)
chr4 (1-144)||(15316604-15316747)
chr4 (1-62)||(24880232-24880293)
chr4 (232-305)||(56030443-56030516)
chr4 (180-273)||(25357583-25357677)
chr4 (27-197)||(25699401-25699571)
chr4 (231-302)||(3937473-3937543)
chr4 (227-302)||(15032800-15032875)
chr4 (204-302)||(16934407-16934505)
chr4 (204-302)||(18847124-18847222)
chr4 (232-302)||(33415751-33415821)
chr4 (228-302)||(44600102-44600176)
chr4 (229-302)||(6764835-6764908)
chr4 (229-302)||(14633316-14633388)
chr4 (1-50)||(16932337-16932386)
chr4 (8-73)||(22048529-22048594)
chr4 (27-143)||(40636868-40636984)
chr4 (229-302)||(40637070-40637143)
chr4 (229-302)||(47868397-47868470)
chr4 (227-302)||(16186100-16186176)
chr4 (187-302)||(38928442-38928557)
chr4 (205-281)||(40999232-40999308)
chr4 (8-51)||(4569704-4569747)
chr4 (219-302)||(9176738-9176821)
chr4 (228-304)||(14787693-14787771)
chr4 (231-302)||(38270250-38270321)
chr4 (229-302)||(2485136-2485210)
chr4 (204-302)||(16932053-16932151)
chr4 (8-50)||(22780929-22780971)
chr4 (235-293)||(41997494-41997552)
chr4 (231-302)||(12102088-12102161)
chr4 (228-302)||(17662498-17662576)
chr4 (231-302)||(2891314-2891386)
chr4 (110-226)||(18847008-18847124)
chr4 (231-302)||(18409611-18409681)
chr4 (26-143)||(31300073-31300190)
chr4 (1-50)||(3825089-3825138)
chr4 (232-305)||(13543953-13544031)
chr4 (205-273)||(52043722-52043791)
chr4 (26-101)||(7050728-7050803)
chr4 (204-260)||(11008876-11008932)
chr4 (27-102)||(11853202-11853277)
chr4 (27-102)||(16489001-16489076)
chr4 (229-273)||(36380370-36380414)
chr4 (231-294)||(12396117-12396180)
chr4 (231-294)||(12401079-12401142)
chr4 (229-296)||(16453305-16453372)
chr4 (227-281)||(28453681-28453736)
chr4 (32-75)||(52942959-52943002)
chr4 (228-302)||(53405122-53405199)
chr4 (25-102)||(15311992-15312069)
chr4 (113-211)||(16932177-16932274)
chr4 (231-289)||(18535106-18535164)
chr4 (29-75)||(40091906-40091952)
chr4 (60-101)||(4556511-4556552)
chr4 (26-102)||(18586615-18586691)
chr4 (228-273)||(22132692-22132737)
chr4 (228-273)||(47211039-47211084)
chr4 (27-102)||(6764654-6764729)
chr4 (31-102)||(8631887-8631958)
chr4 (27-75)||(36921986-36922033)
[»] scaffold0250 (1 HSPs)
scaffold0250 (1-302)||(2603-2904)
[»] chr8 (59 HSPs)
chr8 (1-302)||(27829067-27829368)
chr8 (1-302)||(15072480-15072781)
chr8 (26-302)||(27826781-27827057)
chr8 (110-302)||(14807631-14807822)
chr8 (114-302)||(15067864-15068052)
chr8 (131-304)||(28251829-28252001)
chr8 (27-302)||(12517288-12517565)
chr8 (154-294)||(4423941-4424081)
chr8 (154-294)||(2468370-2468510)
chr8 (154-302)||(3886182-3886333)
chr8 (204-302)||(18810681-18810779)
chr8 (204-302)||(18812866-18812964)
chr8 (1-144)||(3275926-3276070)
chr8 (183-302)||(13858748-13858868)
chr8 (1-143)||(4812902-4813044)
chr8 (227-302)||(14419455-14419530)
chr8 (1-143)||(25684270-25684412)
chr8 (228-305)||(41382670-41382747)
chr8 (231-302)||(5623002-5623073)
chr8 (231-302)||(35872642-35872713)
chr8 (204-302)||(44720816-44720914)
chr8 (229-302)||(1225164-1225237)
chr8 (229-302)||(26775199-26775272)
chr8 (2-102)||(28332259-28332359)
chr8 (228-304)||(181534-181610)
chr8 (110-226)||(44720701-44720816)
chr8 (182-302)||(15185974-15186095)
chr8 (1-211)||(18812642-18812851)
chr8 (231-302)||(21482322-21482393)
chr8 (231-302)||(27107161-27107232)
chr8 (231-302)||(33541652-33541723)
chr8 (228-305)||(41384742-41384818)
chr8 (60-139)||(21033553-21033632)
chr8 (231-302)||(14477276-14477347)
chr8 (231-302)||(25952521-25952592)
chr8 (227-302)||(27911011-27911086)
chr8 (227-302)||(27957430-27957505)
chr8 (232-302)||(36865538-36865609)
chr8 (3-50)||(43081698-43081745)
chr8 (227-273)||(6375985-6376031)
chr8 (227-273)||(31162209-31162255)
chr8 (204-261)||(17847501-17847558)
chr8 (1-102)||(28895127-28895228)
chr8 (228-302)||(43530121-43530199)
chr8 (1-49)||(590440-590488)
chr8 (184-281)||(14419782-14419880)
chr8 (231-302)||(5372442-5372512)
chr8 (8-102)||(16752977-16753071)
chr8 (231-302)||(30480767-30480838)
chr8 (228-302)||(32339302-32339380)
chr8 (31-75)||(28252078-28252122)
chr8 (190-273)||(31035027-31035110)
chr8 (228-304)||(28283481-28283563)
chr8 (27-143)||(9021522-9021638)
chr8 (228-273)||(15809212-15809257)
chr8 (228-273)||(24873480-24873525)
chr8 (26-102)||(29555242-29555318)
chr8 (229-273)||(22684959-22685003)
chr8 (262-302)||(37214474-37214514)
[»] scaffold0131 (1 HSPs)
scaffold0131 (110-292)||(14851-15033)
[»] chr1 (86 HSPs)
chr1 (110-302)||(28207332-28207524)
chr1 (1-302)||(51752078-51752380)
chr1 (110-302)||(13214904-13215096)
chr1 (110-305)||(10400091-10400286)
chr1 (105-302)||(51749857-51750054)
chr1 (110-302)||(13761660-13761852)
chr1 (110-302)||(41646743-41646935)
chr1 (1-302)||(20302172-20302474)
chr1 (105-302)||(6823702-6823900)
chr1 (27-302)||(15823286-15823561)
chr1 (27-302)||(39462258-39462534)
chr1 (154-296)||(47451515-47451657)
chr1 (1-302)||(28842207-28842510)
chr1 (114-289)||(30790673-30790848)
chr1 (154-293)||(38925753-38925892)
chr1 (154-302)||(6822882-6823030)
chr1 (27-273)||(28840418-28840664)
chr1 (110-296)||(3579888-3580076)
chr1 (157-292)||(14098246-14098380)
chr1 (154-243)||(49687407-49687496)
chr1 (231-304)||(14183850-14183923)
chr1 (1-143)||(9526091-9526233)
chr1 (227-296)||(49495471-49495540)
chr1 (1-100)||(14098437-14098536)
chr1 (180-302)||(42922126-42922249)
chr1 (204-302)||(16231518-16231616)
chr1 (227-302)||(18800835-18800910)
chr1 (232-302)||(17318838-17318908)
chr1 (232-302)||(25251541-25251611)
chr1 (228-305)||(2949494-2949571)
chr1 (228-305)||(28998516-28998593)
chr1 (228-305)||(29004232-29004309)
chr1 (206-302)||(50079087-50079184)
chr1 (227-302)||(8349314-8349390)
chr1 (27-79)||(13461340-13461392)
chr1 (27-165)||(25133681-25133820)
chr1 (1-79)||(2393760-2393838)
chr1 (231-302)||(11457741-11457812)
chr1 (231-302)||(17186394-17186465)
chr1 (227-302)||(31423140-31423215)
chr1 (231-294)||(50076946-50077009)
chr1 (232-302)||(18307054-18307124)
chr1 (232-302)||(25248780-25248850)
chr1 (205-302)||(16226085-16226182)
chr1 (231-296)||(17324009-17324074)
chr1 (1-50)||(47179402-47179451)
chr1 (222-302)||(16428588-16428668)
chr1 (227-271)||(43104099-43104143)
chr1 (231-302)||(2617460-2617531)
chr1 (231-302)||(31489859-31489930)
chr1 (228-302)||(6995966-6996040)
chr1 (229-302)||(8347535-8347608)
chr1 (220-302)||(20291390-20291472)
chr1 (229-302)||(12302771-12302849)
chr1 (1-50)||(16228210-16228259)
chr1 (231-292)||(50248848-50248909)
chr1 (227-279)||(16431041-16431093)
chr1 (228-304)||(17324900-17324976)
chr1 (187-294)||(9241359-9241467)
chr1 (228-279)||(48665112-48665163)
chr1 (231-301)||(18839531-18839601)
chr1 (228-273)||(24325597-24325642)
chr1 (27-102)||(9521367-9521442)
chr1 (27-145)||(21353739-21353857)
chr1 (16-48)||(28201926-28201958)
chr1 (30-74)||(46782864-46782908)
chr1 (205-302)||(47177276-47177377)
chr1 (205-302)||(47179627-47179728)
chr1 (205-271)||(155618-155685)
chr1 (228-296)||(2510596-2510668)
chr1 (228-304)||(47906205-47906287)
chr1 (25-102)||(2617278-2617355)
chr1 (229-295)||(6756469-6756535)
chr1 (237-279)||(26520407-26520449)
chr1 (27-73)||(41646681-41646727)
chr1 (228-273)||(9459718-9459763)
chr1 (228-273)||(9463545-9463590)
chr1 (113-174)||(16225973-16226034)
chr1 (205-302)||(26613503-26613603)
chr1 (32-73)||(28207540-28207581)
chr1 (228-302)||(31735787-31735865)
chr1 (228-273)||(46432023-46432068)
chr1 (113-174)||(47177163-47177224)
chr1 (233-273)||(15295143-15295183)
chr1 (233-302)||(21948453-21948526)
chr1 (233-302)||(39932017-39932088)
[»] chr7 (82 HSPs)
chr7 (110-302)||(27306493-27306685)
chr7 (110-302)||(18567446-18567638)
chr7 (110-302)||(31435311-31435503)
chr7 (120-302)||(44407-44589)
chr7 (110-296)||(35462-35648)
chr7 (154-302)||(1049559-1049707)
chr7 (110-302)||(3878405-3878602)
chr7 (131-296)||(22392327-22392492)
chr7 (154-302)||(26804451-26804594)
chr7 (112-302)||(25542365-25542555)
chr7 (180-302)||(7188445-7188568)
chr7 (1-143)||(7074414-7074556)
chr7 (154-302)||(40837006-40837155)
chr7 (1-102)||(25405020-25405121)
chr7 (1-144)||(30246616-30246759)
chr7 (228-305)||(42331260-42331337)
chr7 (228-304)||(13099738-13099814)
chr7 (214-302)||(22251806-22251894)
chr7 (231-302)||(21678020-21678091)
chr7 (3-73)||(44290-44360)
chr7 (21-144)||(7464912-7465035)
chr7 (232-305)||(21990106-21990178)
chr7 (1-143)||(3320463-3320606)
chr7 (187-302)||(11355168-11355283)
chr7 (187-302)||(20137373-20137488)
chr7 (232-304)||(37412390-37412462)
chr7 (231-305)||(4296196-4296271)
chr7 (231-302)||(21679981-21680052)
chr7 (227-302)||(22828897-22828972)
chr7 (27-101)||(44144364-44144438)
chr7 (227-289)||(20091818-20091880)
chr7 (228-302)||(31156175-31156249)
chr7 (1-50)||(1047480-1047529)
chr7 (1-50)||(22136852-22136901)
chr7 (237-302)||(24258423-24258488)
chr7 (1-50)||(40551879-40551928)
chr7 (27-247)||(42006316-42006535)
chr7 (228-304)||(443546-443622)
chr7 (232-296)||(3677235-3677298)
chr7 (232-302)||(24465503-24465574)
chr7 (1-99)||(25409777-25409875)
chr7 (231-302)||(44724533-44724604)
chr7 (233-302)||(24817613-24817682)
chr7 (227-289)||(30906327-30906389)
chr7 (231-301)||(39146252-39146322)
chr7 (231-304)||(42223110-42223184)
chr7 (177-257)||(45366446-45366526)
chr7 (231-302)||(24748548-24748619)
chr7 (227-296)||(6332176-6332245)
chr7 (228-302)||(3035668-3035746)
chr7 (27-143)||(7069433-7069549)
chr7 (232-305)||(9679009-9679087)
chr7 (228-302)||(38393933-38394011)
chr7 (25-73)||(35377-35425)
chr7 (228-280)||(1606421-1606473)
chr7 (233-302)||(7470286-7470359)
chr7 (233-302)||(7472244-7472317)
chr7 (182-261)||(6067497-6067576)
chr7 (233-305)||(7092436-7092512)
chr7 (231-302)||(9680768-9680844)
chr7 (27-144)||(34547256-34547373)
chr7 (113-211)||(1047320-1047417)
chr7 (27-73)||(1049767-1049813)
chr7 (233-304)||(7094684-7094759)
chr7 (228-295)||(11757175-11757246)
chr7 (228-295)||(20299405-20299476)
chr7 (25-75)||(22392290-22392340)
chr7 (231-296)||(27832903-27832969)
chr7 (29-102)||(40946076-40946149)
chr7 (113-174)||(2935156-2935217)
chr7 (228-273)||(7349572-7349617)
chr7 (113-174)||(9027540-9027601)
chr7 (113-174)||(22107953-22108014)
chr7 (113-174)||(22136964-22137025)
chr7 (228-273)||(28485513-28485558)
chr7 (113-174)||(40549713-40549774)
chr7 (113-174)||(40551991-40552052)
chr7 (228-273)||(43253817-43253862)
chr7 (228-260)||(18345488-18345520)
chr7 (228-260)||(38396237-38396269)
chr7 (52-96)||(42057188-42057232)
chr7 (229-302)||(48457601-48457678)
[»] chr5 (82 HSPs)
chr5 (27-302)||(38881845-38882121)
chr5 (154-305)||(36402589-36402739)
chr5 (25-302)||(21947768-21948041)
chr5 (154-302)||(25921737-25921885)
chr5 (110-302)||(20507726-20507918)
chr5 (154-305)||(12556184-12556335)
chr5 (171-302)||(2818600-2818731)
chr5 (27-296)||(16775897-16776167)
chr5 (112-302)||(4236455-4236644)
chr5 (154-302)||(6756361-6756509)
chr5 (120-273)||(21684754-21684907)
chr5 (155-292)||(31466252-31466389)
chr5 (154-302)||(2174786-2174934)
chr5 (155-267)||(39797956-39798068)
chr5 (1-166)||(40222388-40222553)
chr5 (2-75)||(659688-659761)
chr5 (228-299)||(18596588-18596659)
chr5 (228-303)||(41585969-41586044)
chr5 (236-302)||(6661446-6661512)
chr5 (1-102)||(6747018-6747119)
chr5 (204-302)||(31542652-31542750)
chr5 (1-73)||(20504406-20504478)
chr5 (228-304)||(26098513-26098589)
chr5 (231-302)||(36208524-36208596)
chr5 (27-169)||(42237954-42238096)
chr5 (231-302)||(17072827-17072898)
chr5 (231-302)||(25904047-25904118)
chr5 (229-304)||(40221464-40221539)
chr5 (204-302)||(31544997-31545095)
chr5 (228-304)||(26097674-26097750)
chr5 (1-211)||(34477449-34477658)
chr5 (1-210)||(31544772-31544981)
chr5 (229-302)||(10529363-10529436)
chr5 (1-50)||(10756934-10756983)
chr5 (1-50)||(15355042-15355091)
chr5 (1-50)||(23667083-23667132)
chr5 (229-302)||(39854426-39854498)
chr5 (1-73)||(31466450-31466522)
chr5 (231-302)||(34530930-34531001)
chr5 (182-273)||(2144884-2144978)
chr5 (1-94)||(25452120-25452213)
chr5 (233-305)||(18509579-18509652)
chr5 (231-296)||(20044954-20045019)
chr5 (229-302)||(37706044-37706117)
chr5 (234-294)||(10474595-10474655)
chr5 (230-302)||(31179635-31179707)
chr5 (233-305)||(18511473-18511547)
chr5 (231-302)||(20042994-20043065)
chr5 (231-302)||(24126800-24126871)
chr5 (231-302)||(31472877-31472948)
chr5 (32-165)||(17841683-17841816)
chr5 (27-73)||(20507955-20508001)
chr5 (228-304)||(10586780-10586859)
chr5 (238-303)||(21288715-21288780)
chr5 (27-102)||(1240078-1240153)
chr5 (231-279)||(2723911-2723959)
chr5 (229-302)||(4409999-4410076)
chr5 (27-102)||(6744801-6744876)
chr5 (204-260)||(34477378-34477434)
chr5 (27-66)||(661247-661286)
chr5 (231-302)||(695833-695904)
chr5 (231-273)||(1189906-1189949)
chr5 (206-261)||(29748260-29748315)
chr5 (231-302)||(39398257-39398327)
chr5 (113-211)||(31179771-31179868)
chr5 (113-211)||(31542528-31542626)
chr5 (227-289)||(42770714-42770775)
chr5 (228-273)||(3373334-3373379)
chr5 (26-102)||(4409796-4409872)
chr5 (113-174)||(10749591-10749652)
chr5 (113-174)||(10757046-10757107)
chr5 (113-174)||(15354918-15354979)
chr5 (113-174)||(15357194-15357255)
chr5 (228-273)||(15552176-15552221)
chr5 (229-302)||(17818754-17818826)
chr5 (232-302)||(18466625-18466699)
chr5 (228-273)||(27910386-27910431)
chr5 (228-273)||(27912471-27912516)
chr5 (27-102)||(10529563-10529638)
chr5 (26-66)||(12556402-12556442)
chr5 (228-260)||(25803957-25803989)
chr5 (204-260)||(34479739-34479795)
[»] chr2 (63 HSPs)
chr2 (105-302)||(24162476-24162673)
chr2 (24-302)||(21520957-21521237)
chr2 (110-302)||(22407673-22407865)
chr2 (159-302)||(40032322-40032465)
chr2 (110-296)||(27104598-27104784)
chr2 (1-302)||(6259079-6259380)
chr2 (110-302)||(42064314-42064506)
chr2 (120-302)||(13910308-13910490)
chr2 (1-302)||(19502275-19502576)
chr2 (112-302)||(19504609-19504799)
chr2 (154-302)||(6264409-6264557)
chr2 (154-302)||(22287600-22287748)
chr2 (154-302)||(43623832-43623979)
chr2 (154-302)||(18800566-18800713)
chr2 (176-281)||(35107165-35107270)
chr2 (1-144)||(30478640-30478783)
chr2 (227-302)||(37963191-37963266)
chr2 (1-102)||(2740568-2740669)
chr2 (1-102)||(17943184-17943285)
chr2 (1-102)||(22712951-22713052)
chr2 (1-102)||(39686610-39686711)
chr2 (179-292)||(12342684-12342797)
chr2 (1-94)||(28462777-28462870)
chr2 (1-143)||(20050438-20050580)
chr2 (3-53)||(30262265-30262315)
chr2 (231-302)||(11578368-11578439)
chr2 (231-302)||(17849037-17849108)
chr2 (231-302)||(19007560-19007631)
chr2 (231-302)||(31733029-31733100)
chr2 (26-143)||(38190648-38190766)
chr2 (26-261)||(37171049-37171284)
chr2 (232-305)||(15539736-15539809)
chr2 (1-50)||(36559335-36559384)
chr2 (229-302)||(45280249-45280322)
chr2 (187-302)||(22874018-22874133)
chr2 (231-302)||(11739824-11739895)
chr2 (231-294)||(22163219-22163282)
chr2 (228-304)||(42923771-42923849)
chr2 (234-296)||(3022086-3022148)
chr2 (227-273)||(40699226-40699272)
chr2 (228-302)||(42452700-42452774)
chr2 (231-296)||(14837193-14837258)
chr2 (26-75)||(40032538-40032587)
chr2 (187-302)||(28196513-28196628)
chr2 (227-281)||(17897526-17897581)
chr2 (25-102)||(2735856-2735933)
chr2 (27-143)||(12781635-12781751)
chr2 (232-273)||(20147041-20147082)
chr2 (204-261)||(28462591-28462648)
chr2 (205-281)||(35028473-35028550)
chr2 (27-102)||(39679698-39679773)
chr2 (227-270)||(20146903-20146946)
chr2 (239-302)||(34979843-34979906)
chr2 (57-95)||(9653786-9653824)
chr2 (231-273)||(20589581-20589623)
chr2 (232-302)||(38020064-38020134)
chr2 (27-73)||(42064231-42064277)
chr2 (228-273)||(23452534-23452579)
chr2 (63-144)||(28462706-28462787)
chr2 (228-273)||(35215889-35215934)
chr2 (113-174)||(36559211-36559272)
chr2 (182-259)||(45156922-45156999)
chr2 (61-102)||(45567096-45567137)
[»] scaffold0068 (1 HSPs)
scaffold0068 (120-273)||(29003-29156)
[»] scaffold0025 (3 HSPs)
scaffold0025 (157-302)||(69555-69703)
scaffold0025 (154-302)||(73287-73438)
scaffold0025 (1-49)||(69811-69859)
[»] scaffold0224 (1 HSPs)
scaffold0224 (180-302)||(16082-16205)
[»] scaffold1764 (1 HSPs)
scaffold1764 (1-102)||(1082-1183)
[»] scaffold0004 (1 HSPs)
scaffold0004 (187-302)||(79768-79883)
[»] scaffold0154 (1 HSPs)
scaffold0154 (228-305)||(11734-11811)
[»] scaffold0472 (1 HSPs)
scaffold0472 (230-302)||(6151-6223)
[»] scaffold0031 (1 HSPs)
scaffold0031 (228-302)||(79135-79209)
[»] scaffold0552 (2 HSPs)
scaffold0552 (229-302)||(1095-1168)
scaffold0552 (27-102)||(1274-1349)
[»] scaffold0140 (3 HSPs)
scaffold0140 (1-50)||(24164-24213)
scaffold0140 (113-174)||(22001-22062)
scaffold0140 (113-174)||(24276-24337)
[»] scaffold0038 (2 HSPs)
scaffold0038 (229-302)||(41747-41820)
scaffold0038 (27-99)||(41950-42022)
[»] scaffold0005 (2 HSPs)
scaffold0005 (229-302)||(183904-183976)
scaffold0005 (228-304)||(51959-52037)
[»] scaffold0133 (1 HSPs)
scaffold0133 (237-289)||(4773-4825)
[»] scaffold0057 (1 HSPs)
scaffold0057 (227-289)||(16924-16986)
[»] scaffold0256 (1 HSPs)
scaffold0256 (27-102)||(15976-16051)
[»] scaffold0468 (1 HSPs)
scaffold0468 (240-302)||(1895-1958)
[»] scaffold0127 (1 HSPs)
scaffold0127 (113-211)||(12871-12968)
[»] scaffold0006 (1 HSPs)
scaffold0006 (61-143)||(224527-224609)
[»] scaffold0377 (1 HSPs)
scaffold0377 (51-95)||(16554-16597)


Alignment Details
Target: chr6 (Bit Score: 174; Significance: 2e-93; HSPs: 73)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 30729372 - 30729096
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttga 100  Q
    |||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||                     ||||||||||||||    
T  30729372 actgatttgaagtcaaggtggagaattgtgagagttaacttaatatcaggatctgcaaaaatcgt---------------------gccacgatggttga 30729294  T
Q  101 agaattttgtgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgg 200  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||| ||||||||||||||    
T  30729293 agaatttcgtgaggcaagtcactggaaatttcgtgccacgatggggtcacaacgtggcacgatagtgcgctggcagcgaataacagaaacgtatttttgg 30729194  T
Q  201 gtccagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtat 298  Q
    || |||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  30729193 gtgcagatttgttccaaattttaagcggtacttttactataaatatagatcttgtatcagagtaaaccttgagatagagggggctgaaacaagggtat 30729096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 8 - 302
Target Start/End: Complemental strand, 15533239 - 15532945
Alignment:
Q  8 tgaagtcgaggtggagaattgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaagaattt 107  Q
    |||||||  |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15533239 tgaagtcatggtggagaattgtgagagttaacttaaaatcaggatctacagaaatcgtgccacgatggagaagcaacgtgccacgatggttgaagaattt 15533140  T
Q  108 tgtgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccaga 207  Q
     ||||||||||||||||||||||| ||||||||||| | || ||| ||| ||| |||||||| ||| ||| ||||| | |||| ||||||| ||| ||||    
T  15533139 cgtgaggcaagtcactggaaattttgtgccacgatgagatcgcaacgtgtcacaatggtgcgctggtagcaaataagagaaacatatttttaggtgcaga 15533040  T
Q  208 tttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||| | |||||||||||  |||||||||||||||||||||| ||||||||||| ||||| ||||| ||||| |||||||||||||||| |||||    
T  15533039 tttgttccaaattttaagttatacttttactataaatatagaccttgtatcagactaaactttgagatagagggggctgaaacaagggtttagaa 15532945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 27 - 302
Target Start/End: Complemental strand, 15541679 - 15541404
Alignment:
Q  27 tgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaagaattttgtgaggcaagtcactgga 126  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||| |||||| ||||| |||||||||| |||||||| |||||||||    
T  15541679 tgtgagagttaacttaaaatcaggatttgcagaaatcgtgccacgatggagaagcaatgtgccaagatgggtgaagaatttcgtgaggcacgtcactgga 15541580  T
Q  127 aatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagc 226  Q
    |||||| |||||||||| | || ||| ||||||||||||| || |||||||||||| || |||| ||||||| ||| |||||||| | |||||||||||     
T  15541579 aatttcatgccacgatgagatcgcaacgtggcacgatggtacgctggcagcgaatagcagaaacatatttttaggtgcagatttgttccaaattttaagt 15541480  T
Q  227 gatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
     | |||||||||||||||||||| ||||||||||| ||||| ||||| ||||| |||||||||||||||| |||||    
T  15541479 tacacttttactataaatatagaccttgtatcagactaaactttgagatagagggggctgaaacaagggtttagaa 15541404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 113 - 302
Target Start/End: Original strand, 8995341 - 8995529
Alignment:
Q  113 ggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgc 212  Q
    |||||| |||||||||  ||||| |||||||||||||||  |||||||||||||||| || |||| ||||||| ||||||||||| |||| ||||||||     
T  8995341 ggcaaggcactggaaaaatcgtggcacgatggggtcacatcgtggcacgatggtgcgctgacagcaaataacagaaacgtatttt-gggtgcagatttgt 8995439  T
Q  213 ttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||   ||| ||||| ||||| |||||||||| |||||    
T  8995440 tccaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaactgagagatagagggggctaaaacaagggtttagaa 8995529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 113 - 302
Target Start/End: Original strand, 9019788 - 9019976
Alignment:
Q  113 ggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgc 212  Q
    |||||| |||||||||  ||||| |||||||||||||||  |||||||||||||||| || |||| ||||||| ||||||||||| |||| ||||||||     
T  9019788 ggcaaggcactggaaaaatcgtggcacgatggggtcacatcgtggcacgatggtgcgctgacagcaaataacagaaacgtatttt-gggtgcagatttgt 9019886  T
Q  213 ttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||   ||| ||||| ||||| |||||||||| |||||    
T  9019887 tccaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaactgagagatagagggggctaaaacaagggtttagaa 9019976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 26 - 302
Target Start/End: Complemental strand, 19227949 - 19227672
Alignment:
Q  26 ttgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaagaattttgtgaggcaagtcactgg 125  Q
    ||||||||||||||||||||| | ||||||||  ||||||| ||||||||     ||||||| || |||||  |    | ||| ||||||||| ||||||    
T  19227949 ttgtgagagttaacttaaaattaagatctgcaggaatcgtggcacgatggttgggcaacgtggcatgatggaggtttcaatttttgaggcaaggcactgg 19227850  T
Q  126 aaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtattttt-gggtccagatttgcttcaaattttaa 224  Q
    |||  ||||| |||||||||||| ||  |||||||||||||||| |||| |||||||||| |||| ||||||| |||| |||||||| | ||||||||||    
T  19227849 aaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggcgaataacagaaacatattttttgggtgcagatttgttccaaattttaa 19227750  T
Q  225 gcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    | || ||||||||||||||||||||||||||||||||| |||| ||||| || || ||||| |||||||||| |||||    
T  19227749 gggaaacttttactataaatatagatcttgtatcagagcaaactttgagataaagggggctcaaacaagggtttagaa 19227672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 154 - 302
Target Start/End: Complemental strand, 1072289 - 1072141
Alignment:
Q  154 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatctt 253  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||| | |||||||||||| ||||||||||||||||||||||  ||    
T  1072289 gtggcacgatggtacgtaggcagcgaataacataaacgtatttttgggtgcagatttgttccaaattttaagcaatacttttactataaatatagacatt 1072190  T
Q  254 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||| ||||| ||||  | |||||||||||||| |||||    
T  1072189 gtatcagagtaaactttgagatagaaggagctgaaacaagggtttagaa 1072141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 107 - 292
Target Start/End: Complemental strand, 11983487 - 11983303
Alignment:
Q  107 ttgtgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccag 206  Q
    |||||||| ||| |||||||||  ||||| |||||||||||| ||  |||||||||||||||| |||||||||| |||| |||| |||||||| || |||    
T  11983487 ttgtgaggtaag-cactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcag 11983389  T
Q  207 atttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaa 292  Q
    ||||| |||||||||||| ||| |||||||||||||||||||| |||||||||||| |||| | ||| ||||| ||||||||||||    
T  11983388 atttgtttcaaattttaaacgaaacttttactataaatatagaccttgtatcagagcaaacttggagatagagggggctgaaacaa 11983303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 115 - 302
Target Start/End: Complemental strand, 14507626 - 14507439
Alignment:
Q  115 caagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgctt 214  Q
    |||| |||||||||  | ||| |||||||||||| ||  |||||||||||||||| || ||||||| |||| |||| |||||||| ||  ||||||| |     
T  14507626 caaggcactggaaaaatggtggcacgatggggtcgcatcgtggcacgatggtgcgctgccagcgaaaaacagaaacatatttttgagtgtagatttgttc 14507527  T
Q  215 caaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||| |||| ||||| ||||| ||||| |||||||||| |||||    
T  14507526 caaattttaagcgatacttttactataaatatagaccttgtattagagcaaactttgagatagagggggctaaaacaagggtttagaa 14507439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 154 - 296
Target Start/End: Original strand, 32279899 - 32280040
Alignment:
Q  154 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatctt 253  Q
    |||||||||||||||| |||| |||||||||||||| ||||||||| || |||||||| | ||||||||||||||||||||| ||||| ||||||| |||    
T  32279899 gtggcacgatggtgcgctggcggcgaataacataaatgtatttttgagtgcagatttgttccaaattttaagcgatacttttcctatatatatagacctt 32279998  T
Q  254 gtatcagagtaaaccttgagctagagagggctgaaacaagggt 296  Q
    |||||| ||||||| | ||| ||||| ||||||||||||||||    
T  32279999 gtatcatagtaaacttggagatagag-gggctgaaacaagggt 32280040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 110 - 304
Target Start/End: Complemental strand, 15530578 - 15530384
Alignment:
Q  110 tgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatt 209  Q
    ||||||||  |||| |||| ||||||  ||||||||| | ||  |||||||||||||| | |||||| |||| | | |||| ||||||||||| ||| ||    
T  15530578 tgaggcaaagcactcgaaaattcgtggtacgatggggccgcatcgtggcacgatggtgtgctggcagtgaattatagaaacatatttttgggtgcaggtt 15530479  T
Q  210 tgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatg 304  Q
    || | ||||||||||||||||||||||||||||||||||| |||||||||||||||||   ||| ||||| |||||||| ||||||  |||||||    
T  15530478 tgttccaaattttaagcgatacttttactataaatatagaccttgtatcagagtaaactgggagatagagggggctgaagcaagggcttagaatg 15530384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 228 - 305
Target Start/End: Original strand, 17852518 - 17852595
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatga 305  Q
    ||||||||||||||||||||||  ||| |||||||||||||||||| ||||| |||||||||||||||| ||||||||    
T  17852518 atacttttactataaatatagactttgaatcagagtaaaccttgagatagagggggctgaaacaagggtttagaatga 17852595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 13883102 - 13883244
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg 99  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||  |||||  |  ||||||||||||||||||| || || |||||||||||||    
T  13883102 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctg-gagtatcgtgccacgatggagaagcatcgcgccacgatggttg 13883200  T
Q  100 aagaattttgtgaggcaagtcactggaaatttcgtgccacgatg 143  Q
    ||| |   |    || ||| ||||||||||||||||||||||||    
T  13883201 aagcaagattcctgggaagacactggaaatttcgtgccacgatg 13883244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 31249269 - 31249127
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg 99  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||  |||||  |  ||||||||||||||||||| || || |||||||||||||    
T  31249269 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctg-gagtatcgtgccacgatggagaagcatcgcgccacgatggttg 31249171  T
Q  100 aagaattttgtgaggcaagtcactggaaatttcgtgccacgatg 143  Q
    ||| |   |    || ||| ||||||||||||||||||||||||    
T  31249170 aagcaagattcctgggaagacactggaaatttcgtgccacgatg 31249127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 35201881 - 35201739
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg 99  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||  |||||  |  ||||||||||||||||||| || || |||||||||||||    
T  35201881 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctg-gagtatcgtgccacgatggagaagcatcgcgccacgatggttg 35201783  T
Q  100 aagaattttgtgaggcaagtcactggaaatttcgtgccacgatg 143  Q
    ||| |   |    || ||| ||||||||||||||||||||||||    
T  35201782 aagcaagattcctgggaagacactggaaatttcgtgccacgatg 35201739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 227 - 303
Target Start/End: Original strand, 15346366 - 15346442
Alignment:
Q  227 gatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaat 303  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||| ||||| |||||||| ||||||| ||||||    
T  15346366 gatacttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaccaagggtttagaat 15346442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 231 - 302
Target Start/End: Original strand, 13057173 - 13057244
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||  ||||||||| |||||||||||| ||||| |||||||||||||||| |||||    
T  13057173 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaa 13057244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 231 - 302
Target Start/End: Complemental strand, 24338783 - 24338712
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||  ||||||||| |||||||||||| ||||| |||||||||||||||| |||||    
T  24338783 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaa 24338712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 231 - 302
Target Start/End: Complemental strand, 32447651 - 32447580
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||||||||||||   |||||||||||||||||||||| ||||| |||||||||||||||| |||||    
T  32447651 cttttactataaatataggctttgtatcagagtaaaccttgagatagagggggctgaaacaagggtttagaa 32447580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 228 - 302
Target Start/End: Complemental strand, 12195853 - 12195779
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||||| ||||||||| || |||| ||||| ||||| |||||||||||||||| |||||    
T  12195853 atacttttactataaatatagaccttgtatcaaagcaaactttgagatagagggggctgaaacaagggtttagaa 12195779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 35209116 - 35209015
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg 99  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||  |||||  |  |||||||||| |||||||| || || |||||||||||||    
T  35209116 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctg-gagtatcgtgccacaatggagaagcatcgcgccacgatggttg 35209018  T
Q  100 aag 102  Q
    |||    
T  35209017 aag 35209015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 227 - 302
Target Start/End: Complemental strand, 25466509 - 25466434
Alignment:
Q  227 gatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctg-aaacaagggtatagaa 302  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||| |||||| ||||| |||||||||| |||||    
T  25466509 gatacttttactataaatatagatcttttgtcagagtaaaccttgaggtagaga-ggctgaaaacaagggtttagaa 25466434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 227 - 302
Target Start/End: Original strand, 3390354 - 3390429
Alignment:
Q  227 gatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||||||  |||||||||  ||||||||||| ||||  |||||||||||||||| |||||    
T  3390354 gatacttttactataaatatagacattgtatcagtataaaccttgagatagacggggctgaaacaagggtttagaa 3390429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 231 - 302
Target Start/End: Original strand, 13039733 - 13039804
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||| ||||||||| |||||||||||| || ||  ||||||||||||||| |||||    
T  13039733 cttttactataaatatagatattgtatcagtgtaaaccttgagatataggaggctgaaacaagggtttagaa 13039804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 231 - 302
Target Start/End: Original strand, 25477253 - 25477324
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||| ||||||||||  ||||||||| |||||||||||| ||||| |||||||||||||||| |||||    
T  25477253 cttttactgtaaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaa 25477324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 229 - 302
Target Start/End: Complemental strand, 1230586 - 1230513
Alignment:
Q  229 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||| |||||||||||||| ||||||||| || |||| ||||| ||||||||| |||||||||||| |||||    
T  1230586 tactttcactataaatatagaccttgtatcatagcaaactttgagatagagagggttgaaacaagggtttagaa 1230513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 26066637 - 26066588
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcagg 50  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  26066637 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagg 26066588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 229 - 302
Target Start/End: Complemental strand, 28241658 - 28241585
Alignment:
Q  229 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||| |||||||||||||| |||||||||||| |||| | ||| ||||| |||||||||||||||| |||||    
T  28241658 tactttcactataaatatagaccttgtatcagagcaaacttagagatagagggggctgaaacaagggtttagaa 28241585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 33310928 - 33310977
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcagg 50  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  33310928 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagg 33310977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 197
Target Start/End: Original strand, 26642829 - 26642998
Alignment:
Q  27 tgtgagagttaacttaaaatcagg-atctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg-aagaattttgtgaggcaagtcactg 124  Q
    |||||||||||||||||||||||| ||||| | ||| |||||||||||||||||  ||||||| ||||| |||| || ||  || ||| || ||||||||    
T  26642829 tgtgagagttaacttaaaatcaggaatctggagaaa-cgtgccacgatggagaaggaacgtgcaacgattgttgaaacaagattctgaagc-agtcactg 26642926  T
Q  125 gaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttt 197  Q
    |||| ||||||| |||||||  ||  || ||||||||||||| |||| | ||  ||||||| |||||||||||    
T  26642927 gaaacttcgtgcaacgatggaatcgtaacgtggcacgatggtacgtt-gaaggaaataacagaaacgtatttt 26642998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 197
Target Start/End: Original strand, 26748795 - 26748964
Alignment:
Q  27 tgtgagagttaacttaaaatcagg-atctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg-aagaattttgtgaggcaagtcactg 124  Q
    |||||||||||||||||||||||| ||||| | ||| |||||||||||||||||  ||||||| ||||| |||| || ||  || ||| || ||||||||    
T  26748795 tgtgagagttaacttaaaatcaggaatctggagaaa-cgtgccacgatggagaaggaacgtgcaacgattgttgaaacaagattctgaagc-agtcactg 26748892  T
Q  125 gaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttt 197  Q
    |||| ||||||| |||||||  ||  || ||||||||||||| |||| | ||  ||||||| |||||||||||    
T  26748893 gaaacttcgtgcaacgatggaatcgtaacgtggcacgatggtacgtt-gaaggaaataacagaaacgtatttt 26748964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 294
Target Start/End: Complemental strand, 3234065 - 3234003
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagg 294  Q
    ||||||||||||||||||| |||||||||| ||||||||| || ||||| ||||||||||||||    
T  3234065 cttttactataaatataga-cttgtatcagtgtaaaccttaagatagagggggctgaaacaagg 3234003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 302
Target Start/End: Complemental strand, 3632271 - 3632202
Alignment:
Q  233 tttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||  ||||||||| |||||||||||| ||||| | | |||||||||||| |||||    
T  3632271 tttactataaatatagacattgtatcagtgtaaaccttgagatagagggagttgaaacaagggtttagaa 3632202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 238 - 302
Target Start/End: Complemental strand, 14459093 - 14459029
Alignment:
Q  238 tataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||| |||||||||||| |||| ||||| ||||| ||||||||| |||||| |||||    
T  14459093 tataaatatagaccttgtatcagagcaaactttgagatagagggggctgaaataagggtttagaa 14459029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 15530661 - 15530613
Alignment:
Q  27 tgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatgg 75  Q
    |||||||||||||||||||||||||||||||  ||||||| ||||||||    
T  15530661 tgtgagagttaacttaaaatcaggatctgcaggaatcgtggcacgatgg 15530613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 131 - 231
Target Start/End: Complemental strand, 24192730 - 24192630
Alignment:
Q  131 tcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgata 230  Q
    ||||||||||||||| |  ||| |||||| ||||| ||| ||||||||||||||| |||| |||||||  || || ||||| | |||||||||||| |||    
T  24192730 tcgtgccacgatgggattgcaatgtggcatgatggggcgctggcagcgaataacagaaacatatttttcagtgcaaatttgttccaaattttaagcaata 24192631  T
Q  231 c 231  Q
    |    
T  24192630 c 24192630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 231 - 302
Target Start/End: Original strand, 14466312 - 14466383
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||||| |||||||  |||||| ||| ||||||||||| ||||||||| ||||||||| || |||||    
T  14466312 cttttactatagatatagactttgtattagaataaaccttgagatagagagggttgaaacaagagtttagaa 14466383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 273
Target Start/End: Complemental strand, 16455800 - 16455717
Alignment:
Q  190 cgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgag 273  Q
    ||||||||||||  |||||||| | ||| |||| || ||||| ||||||||||||||| | |||||||| | ||||||||||||    
T  16455800 cgtatttttgggctcagatttgttccaatttttcagggatacctttactataaatatataccttgtatcggtgtaaaccttgag 16455717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 102
Target Start/End: Complemental strand, 1230769 - 1230692
Alignment:
Q  25 attgtgagagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag 102  Q
    ||||||||||||||||||||||||| | ||||  | |||||||||||||||||||| |  ||||||||||| |||||||    
T  1230769 attgtgagagttaacttaaaatcagaattctg-gagaatcgtgccacgatggagaagcttcgtgccacgattgttgaag 1230692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 3028189 - 3028143
Alignment:
Q  227 gatacttttactataaatatagatcttgtatcagagtaaaccttgag 273  Q
    ||||||||||||||||||||||| ||||||||| |||||||| ||||    
T  3028189 gatacttttactataaatatagaccttgtatcaaagtaaaccatgag 3028143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 269
Target Start/End: Original strand, 11138278 - 11138320
Alignment:
Q  227 gatacttttactataaatatagatcttgtatcagagtaaacct 269  Q
    ||||||||||||||| ||||| |||||||||||||||||||||    
T  11138278 gatacttttactatagatataaatcttgtatcagagtaaacct 11138320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 204 - 273
Target Start/End: Complemental strand, 4816607 - 4816538
Alignment:
Q  204 cagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgag 273  Q
    |||||||| | || ||||||||| | |||||||||||||||||||| ||||||||||  ||||| |||||    
T  4816607 cagatttgttacagattttaagcaagacttttactataaatatagaccttgtatcaggctaaactttgag 4816538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 102
Target Start/End: Complemental strand, 17695383 - 17695307
Alignment:
Q  26 ttgtgagagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag 102  Q
    |||||||||||||||||||||||| | ||||  | |||||||||||||||||||| || || |||||||| |||||||    
T  17695383 ttgtgagagttaacttaaaatcagaattctg-gagaatcgtgccacgatggagaagcatcgcgccacgattgttgaag 17695307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 231 - 296
Target Start/End: Original strand, 22490618 - 22490683
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggt 296  Q
    ||||||| |||||||||||  ||| || || |||||||||||| ||||| ||||||||||||||||    
T  22490618 cttttaccataaatatagacattgaattagtgtaaaccttgagatagagggggctgaaacaagggt 22490683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 102
Target Start/End: Original strand, 26064755 - 26064831
Alignment:
Q  26 ttgtgagagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag 102  Q
    |||||||||||||||||||||||| | ||||  | |||||||||||||||||||| |  ||||||||||| |||||||    
T  26064755 ttgtgagagttaacttaaaatcagaattctg-gagaatcgtgccacgatggagaagcttcgtgccacgattgttgaag 26064831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 102
Target Start/End: Original strand, 26084724 - 26084800
Alignment:
Q  26 ttgtgagagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag 102  Q
    |||||||||||||||||||||||| | ||||  | |||||||||||||||||||| |  ||||||||||| |||||||    
T  26084724 ttgtgagagttaacttaaaatcagaattctg-gagaatcgtgccacgatggagaagcttcgtgccacgattgttgaag 26084800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 28241860 - 28241788
Alignment:
Q  27 tgtgagagttaacttaaaatcaggat-ctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg 99  Q
    ||||||||||||||||||||||| || ||| || |||||||||||||||||||| |  ||||||||||| ||||    
T  28241860 tgtgagagttaacttaaaatcagaattctg-aagaatcgtgccacgatggagaagcttcgtgccacgattgttg 28241788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 1072395 - 1072347
Alignment:
Q  27 tgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatgg 75  Q
    |||||||||||||||||||||||| |||||| ||||||||  |||||||    
T  1072395 tgtgagagttaacttaaaatcaggttctgcagaaatcgtggtacgatgg 1072347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 291
Target Start/End: Complemental strand, 3630199 - 3630139
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaaca 291  Q
    |||||||||||||||||||  ||||||||  ||||| |||||| ||||| |||||||||||    
T  3630199 cttttactataaatatagacattgtatcaatgtaaaacttgagatagagggggctgaaaca 3630139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 8995255 - 8995303
Alignment:
Q  27 tgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatgg 75  Q
    ||||||||||||||||||||||||||||| |  ||||||| ||||||||    
T  8995255 tgtgagagttaacttaaaatcaggatctgtaggaatcgtggcacgatgg 8995303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 9019702 - 9019750
Alignment:
Q  27 tgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatgg 75  Q
    ||||||||||||||||||||||||||||| |  ||||||| ||||||||    
T  9019702 tgtgagagttaacttaaaatcaggatctgtaggaatcgtggcacgatgg 9019750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 302
Target Start/End: Complemental strand, 12186431 - 12186331
Alignment:
Q  205 agatttgcttcaaattttaagcgat-acttttactataaatatagatcttgtatcaga-gtaaaccttgagctagagagggctg-aaacaagggtataga 301  Q
    ||||||| | ||| |||| |||||| |||||||||||||||||| | ||||||||| | |||||||||||| ||||  |||||| |||||||||| ||||    
T  12186431 agatttgttccaattttttagcgattacttttactataaatataaaccttgtatcacatgtaaaccttgagatagaaggggctgaaaacaagggtttaga 12186332  T
Q  302 a 302  Q
    |    
T  12186331 a 12186331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 260
Target Start/End: Complemental strand, 20915720 - 20915664
Alignment:
Q  204 cagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcag 260  Q
    |||||||| | || ||||||||| | |||||||||||||||||||| ||||||||||    
T  20915720 cagatttgttacagattttaagcaagacttttactataaatatagaccttgtatcag 20915664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 231
Target Start/End: Complemental strand, 24191633 - 24191533
Alignment:
Q  131 tcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgata 230  Q
    ||||||||||||||| |  ||| |||| | ||||| ||| ||||||||||||||| |||| |||||||  || || ||||| | |||||||||||| |||    
T  24191633 tcgtgccacgatgggattgcaatgtggtatgatggggcgctggcagcgaataacagaaacatatttttcagtgcaaatttgttccaaattttaagcaata 24191534  T
Q  231 c 231  Q
    |    
T  24191533 c 24191533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 24191668 - 24191620
Alignment:
Q  27 tgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatgg 75  Q
    |||||||||||||||||||||||| | | || |||||||||||||||||    
T  24191668 tgtgagagttaacttaaaatcaggttttacagaaatcgtgccacgatgg 24191620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 24192765 - 24192717
Alignment:
Q  27 tgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatgg 75  Q
    |||||||||||||||||||||||| | | || |||||||||||||||||    
T  24192765 tgtgagagttaacttaaaatcaggttttacagaaatcgtgccacgatgg 24192717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 26887754 - 26887679
Alignment:
Q  27 tgtgagagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag 102  Q
    ||||||||||||||||||||||| | |||| |  | |||||||||||||||||| || || ||||||||||||||||    
T  26887754 tgtgagagttaacttaaaatcagaaatctggagca-tcgtgccacgatggagaagcatcgcgccacgatggttgaag 26887679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 30975228 - 30975153
Alignment:
Q  27 tgtgagagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag 102  Q
    ||||||||||||||||||||||| | |||| |  | |||||||||||||||||| || || ||||||||||||||||    
T  30975228 tgtgagagttaacttaaaatcagaaatctggagta-tcgtgccacgatggagaagcatcgcgccacgatggttgaag 30975153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 30981667 - 30981592
Alignment:
Q  27 tgtgagagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag 102  Q
    ||||||||||||||||||||||| | |||| |  | |||||||||||||||||| || || ||||||||||||||||    
T  30981667 tgtgagagttaacttaaaatcagaaatctggagta-tcgtgccacgatggagaagcatcgcgccacgatggttgaag 30981592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 30987831 - 30987756
Alignment:
Q  27 tgtgagagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag 102  Q
    ||||||||||||||||||||||| | |||| |  | |||||||||||||||||| || || ||||||||||||||||    
T  30987831 tgtgagagttaacttaaaatcagaaatctggagta-tcgtgccacgatggagaagcatcgcgccacgatggttgaag 30987756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 231 - 302
Target Start/End: Complemental strand, 12161889 - 12161819
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||| ||||||||||  ||||||||  |||||||||||| || || |||||||||||||||| |||||    
T  12161889 cttttactttaaatatagacattgtatcattgtaaaccttgagataaag-gggctgaaacaagggtttagaa 12161819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 17012029 - 17012080
Alignment:
Q  237 ctataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaa 288  Q
    ||||||||||||| |||||||| |||||||||||||| ||||| || |||||    
T  17012029 ctataaatatagaccttgtatcggagtaaaccttgagatagaggggtctgaa 17012080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 26068796 - 26068699
Alignment:
Q  113 ggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttg 211  Q
    |||||| |||||||||  ||||| |||||||||||| ||  |||||||||||||||| |||| |  || || | |||||||||||||||  ||||||||    
T  26068796 ggcaaggcactggaaaaatcgtggcacgatggggtctcatcgtggcacgatggtgcgctggcggataaaaata-aaacgtatttttgggagcagatttg 26068699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 211
Target Start/End: Complemental strand, 4816723 - 4816623
Alignment:
Q  110 tgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatt 209  Q
    |||||||||  ||||||||  ||||| |||||||||||| ||  |||||||||||||| | ||| ||| || |||| |||| ||||||| ||| ||||||    
T  4816723 tgaggcaaggtactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgtgctggtagc-aaaaacagaaacatattttttggtgcagatt 4816625  T
Q  210 tg 211  Q
    ||    
T  4816624 tg 4816623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 273
Target Start/End: Complemental strand, 26068661 - 26068592
Alignment:
Q  204 cagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgag 273  Q
    |||||||| | || |||||||||   |||||||||||||||||||| ||||||||| || |||| |||||    
T  26068661 cagatttgttacagattttaagcaggacttttactataaatatagaccttgtatcaaagcaaactttgag 26068592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 174
Target Start/End: Complemental strand, 29755193 - 29755132
Alignment:
Q  113 ggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggc 174  Q
    |||||| |||||||||  ||||| |||||||||||| ||  |||||||||||||||| ||||    
T  29755193 ggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 29755132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 174
Target Start/End: Original strand, 33308771 - 33308832
Alignment:
Q  113 ggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggc 174  Q
    |||||| |||||||||  ||||| |||||||||||| ||  |||||||||||||||| ||||    
T  33308771 ggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 33308832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 174
Target Start/End: Original strand, 33311040 - 33311101
Alignment:
Q  113 ggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggc 174  Q
    |||||| |||||||||  ||||| |||||||||||| ||  |||||||||||||||| ||||    
T  33311040 ggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 33311101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 279
Target Start/End: Original strand, 10584105 - 10584153
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagag 279  Q
    ||||||||||||||||| |  ||||||||| |||||||||||| |||||    
T  10584105 cttttactataaatataaacattgtatcagtgtaaaccttgagatagag 10584153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 12937549 - 12937478
Alignment:
Q  215 caaattttaagcgatacttttactataaa--tatagatcttgtatcaga-gtaaaccttgagctagagaggg 283  Q
    |||||||| || |||||||||||||||||  ||||||  |||||||||| |||||||||||| || ||||||    
T  12937549 caaatttttagggatacttttactataaatatatagacattgtatcagatgtaaaccttgagatacagaggg 12937478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 238 - 302
Target Start/End: Complemental strand, 13870749 - 13870686
Alignment:
Q  238 tataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||   ||||||||||| |||||||||| ||||| ||||||||| |||||| |||||    
T  13870749 tataaatataggctttgtatcagagcaaaccttgagatagag-gggctgaaataagggtttagaa 13870686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 26066389 - 26066321
Alignment:
Q  205 agatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgag 273  Q
    ||||||| | || |||||||||   |||||||||||||||||||| ||||||||| || |||| |||||    
T  26066389 agatttgttacagattttaagcaggacttttactataaatatagaccttgtatcaaagcaaactttgag 26066321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 260
Target Start/End: Complemental strand, 30034945 - 30034913
Alignment:
Q  228 atacttttactataaatatagatcttgtatcag 260  Q
    |||||||||||||||||||||| ||||||||||    
T  30034945 atacttttactataaatatagaccttgtatcag 30034913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 172; Significance: 3e-92; HSPs: 124)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 27 - 302
Target Start/End: Original strand, 45882659 - 45882934
Alignment:
Q  27 tgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaagaattttgtgaggcaagtcactgga 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| | |||||||||||    
T  45882659 tgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaagattttcgtgaagtaagtcactgga 45882758  T
Q  127 aatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagc 226  Q
    ||  ||||||||||||||| |  ||| |||||||||||||||| || || ||||||||| |||| ||||||||||| |||||||| |  |||||||||||    
T  45882759 aaaatcgtgccacgatgggattgcaacgtggcacgatggtgcgctgacaacgaataacagaaacctatttttgggtgcagatttgttgaaaattttaagc 45882858  T
Q  227 gatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||||||||||||||||| ||||||||| |||||||  |||| ||||| |||||||||||||||| |||||    
T  45882859 gatacttttactataaatatagaccttgtatcatagtaaactatgagatagagggggctgaaacaagggtttagaa 45882934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 1 - 304
Target Start/End: Complemental strand, 10956589 - 10956287
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttga 100  Q
    |||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||  ||||||| ||| ||||    ||| | || ||||||   ||     
T  10956589 actgatttgaagtcaaggtggataattgtgagagttaacttaaaatcaggatctgcaggaatcgtggcac-atggctggacatcatggcacgat---tgg 10956494  T
Q  101 agaatt---ttgtgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttt 197  Q
    ||  ||   || || |||||| |||||||||  ||||| |||||||||||| ||  |||||||||||||||| |||||||||||||||||||||||||||    
T  10956493 aggtttcagttttggggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcgaataacataaacgtatttt 10956394  T
Q  198 tgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggta 297  Q
    | ||| |||||||| | |||||||||||| ||  |||||||||||||||||| ||||||||||||||||| |  || ||||| ||||||||||||||||     
T  10956393 taggtgcagatttgttccaaattttaagcaatttttttactataaatatagaccttgtatcagagtaaacatgaagatagagggggctgaaacaagggtt 10956294  T
Q  298 tagaatg 304  Q
    |||||||    
T  10956293 tagaatg 10956287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 27 - 302
Target Start/End: Original strand, 18162405 - 18162658
Alignment:
Q  27 tgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaagaattttgtgaggcaagtcactgga 126  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||  |||| ||||||||||||||||||||||| ||| |||| |||||||||||||    
T  18162405 tgtgagagttaacttaaaatcaggatctgcataaatcgtgccacgataaagaagcaacgtgccacgatggttgaagattttcgtgaagcaagtcactgga 18162504  T
Q  127 aatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagc 226  Q
    ||  |||||||||                     ||||||||| ||||||||||||||| |||||||||||||||| |||||||| | ||||||||||||    
T  18162505 aaaatcgtgccac---------------------gatggtgcgctggcagcgaataacagaaacgtatttttgggtgcagatttgttccaaattttaagc 18162583  T
Q  227 gatacttttactataaatatagatcttgtatca-gagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||||||||||||||||| ||||||||| |||||||| | |||  | |||||| |||||||||||| |||||    
T  18162584 gatacttttactataaatatagaccttgtatcatgagtaaacttggag--atagagggatgaaacaagggtttagaa 18162658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 131 - 302
Target Start/End: Original strand, 3859352 - 3859523
Alignment:
Q  131 tcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgata 230  Q
    ||||| |||||||||||||||  |||||||||||||||| |||| |||||||| |||||||||||||||||| |||||||| |||||||||||||||| |    
T  3859352 tcgtggcacgatggggtcacatcgtggcacgatggtgcgctggcggcgaataatataaacgtatttttgggtgcagatttgtttcaaattttaagcgaaa 3859451  T
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||||||||||||| |||||||||||| |||| | ||| ||||| |||||||||||||||| |||||    
T  3859452 cttttactataaatatagaccttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaa 3859523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 110 - 302
Target Start/End: Complemental strand, 32264497 - 32264301
Alignment:
Q  110 tgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatt 209  Q
    |||||||||||||||||  ||||||| ||||||||| |  ||| |||||||||||||||| ||||||||||||||| |||| ||||||||||| ||||||    
T  32264497 tgaggcaagtcactggatttttcgtggcacgatgggcttgcaacgtggcacgatggtgcgctggcagcgaataacagaaacatatttttgggtgcagatt 32264398  T
Q  210 tgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagta----aaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    || ||||||||||||||||||||||||||||||||||||| ||||||||||||||    ||| ||||| ||||| ||||| |||||||||| |||||    
T  32264397 tgtttcaaattttaagcgatacttttactataaatatagaccttgtatcagagtaaattaactttgagatagagggggctcaaacaagggtttagaa 32264301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 110 - 302
Target Start/End: Complemental strand, 22114759 - 22114567
Alignment:
Q  110 tgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatt 209  Q
    ||||||||| |||||||||  | ||| |||||||||||| ||  |||||||||||||||| |||| |||||||||| |||||||||||||||| ||||||    
T  22114759 tgaggcaaggcactggaaaaattgtggcacgatggggtcgcatcgtggcacgatggtgcgatggcggcgaataacagaaacgtatttttgggtgcagatt 22114660  T
Q  210 tgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    || | |||||||||||||| |||||||||||||||||||| |||||||||||| |||| | ||| ||||  |||||||||||||||| |||||    
T  22114659 tgttccaaattttaagcgaaacttttactataaatatagaccttgtatcagagcaaacttggagatagaaggggctgaaacaagggtttagaa 22114567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 110 - 302
Target Start/End: Original strand, 1321244 - 1321436
Alignment:
Q  110 tgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatt 209  Q
    ||||||||  ||||| |||  ||||| |||||||||||| ||  |||||||||||||| | |||||||||| |||| |||| |||||||| || ||||||    
T  1321244 tgaggcaaagcactgaaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatt 1321343  T
Q  210 tgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    || | |||||||||||||||||||||||||||||||||||  ||||||||||| |||| ||||| ||||| |||||||||||||||| |||||    
T  1321344 tgttccaaattttaagcgatacttttactataaatatagactttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaa 1321436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 110 - 302
Target Start/End: Complemental strand, 5523069 - 5522877
Alignment:
Q  110 tgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatt 209  Q
    |||||||||  ||||||||  ||||| ||| ||||| || ||  |||||||||||||||| |||||||||| |||| |||| |||||||| || ||||||    
T  5523069 tgaggcaaggtactggaaaaatcgtggcacaatgggatcgcatcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatt 5522970  T
Q  210 tgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    || |||||||||||||||| |||||||||||||||||||| |||||||||||| |||| | ||| ||||| |||||||||||||||| |||||    
T  5522969 tgtttcaaattttaagcgaaacttttactataaatatagaccttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaa 5522877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 120 - 304
Target Start/End: Complemental strand, 10958767 - 10958583
Alignment:
Q  120 cactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaat 219  Q
    |||||||||  ||||| |||||||||||| ||  |||||||||||||||| ||||||| ||||||| |||||||||||| ||| |||||||| | |||||    
T  10958767 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagccaataacagaaacgtatttttaggtgcagatttgttccaaat 10958668  T
Q  220 tttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatg 304  Q
    ||||||| ||  |||||||||||||||||| ||||||||||||||||| |  || ||||| |||||||||||||||| |||||||    
T  10958667 tttaagcaatttttttactataaatatagaccttgtatcagagtaaacataaagatagagggggctgaaacaagggtttagaatg 10958583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 154 - 302
Target Start/End: Original strand, 11162997 - 11163145
Alignment:
Q  154 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatctt 253  Q
    |||||||||||||||| |||| |||||||||| |||||||||||||||| |||||||| | |||||||||||||| |||||||| ||||||||||| |||    
T  11162997 gtggcacgatggtgcgctggcggcgaataacagaaacgtatttttgggtgcagatttgttccaaattttaagcgaaacttttacgataaatatagacctt 11163096  T
Q  254 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||| |||| ||||| ||||| |||||||||||||||| |||||    
T  11163097 gtatcagagcaaactttgagatagagggggctgaaacaagggtttagaa 11163145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 110 - 304
Target Start/End: Complemental strand, 18099624 - 18099430
Alignment:
Q  110 tgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatt 209  Q
    ||||||||| |||||||||  ||||| |||||||||||| ||  |||||||||||||||| |||| ||||| || | |||||||||||||||| ||||||    
T  18099624 tgaggcaagacactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggcgaacaatagaaacgtatttttgggtgcagatt 18099525  T
Q  210 tgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaacct-tgagctagagagggctgaaacaagggtatagaatg 304  Q
    || | |||||||||||||| ||||||||||| |||||||| ||||||||||||||||| |  ||| ||||| |||||||||||||||| |||||||    
T  18099524 tgttccaaattttaagcgagacttttactat-aatatagaccttgtatcagagtaaacttgagagatagagggggctgaaacaagggtttagaatg 18099430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 114 - 289
Target Start/End: Original strand, 24177086 - 24177261
Alignment:
Q  114 gcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgct 213  Q
    |||||||||||||||    ||| ||||||||| || ||| ||||||||||||||||||||  ||||| |||||||||||||||||  || |||||||| |    
T  24177086 gcaagtcactggaaaaaatgtggcacgatgggatcgcaatgtggcacgatggtgcgttggaggcgaaaaacataaacgtatttttaagtgcagatttgtt 24177185  T
Q  214 tcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaa 289  Q
     ||||||||||| |||||||||| |||||||||||| ||||||||| ||||||| ||||||||||| |||||||||    
T  24177186 ccaaattttaagggatacttttattataaatatagaccttgtatcatagtaaacattgagctagagggggctgaaa 24177261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 154 - 302
Target Start/End: Original strand, 11170251 - 11170399
Alignment:
Q  154 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatctt 253  Q
    ||||| |||| ||||| |||| |||||||||| |||| ||||||||||| |||||||| | |||||||||||||| |||||||||||||||||||| |||    
T  11170251 gtggctcgattgtgcgctggcggcgaataacagaaacatatttttgggtgcagatttgttccaaattttaagcgaaacttttactataaatatagacctt 11170350  T
Q  254 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||| |||| ||||| ||||| |||||||||||||||| |||||    
T  11170351 gtatcagagcaaactttgagatagagggggctgaaacaagggtttagaa 11170399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 154 - 294
Target Start/End: Complemental strand, 48362080 - 48361940
Alignment:
Q  154 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatctt 253  Q
    |||||| ||||||||| |||||||||||| || |||||||||||||| | |||||||| | ||||||||||||||||||||||||||||||||||| |||    
T  48362080 gtggcatgatggtgcgctggcagcgaatagcagaaacgtatttttggatgcagatttgttccaaattttaagcgatacttttactataaatatagacctt 48361981  T
Q  254 gtatcagagtaaaccttgagctagagagggctgaaacaagg 294  Q
    |||||| ||||||| ||||| || || ||||||||||||||    
T  48361980 gtatcatagtaaactttgagatacagggggctgaaacaagg 48361940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 26 - 302
Target Start/End: Original strand, 26720267 - 26720543
Alignment:
Q  26 ttgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaagaattt---tgtgaggcaagtcac 122  Q
    ||||||||||||||||||||||||||||||||  ||||||| ||||||||   | ||||||| || |||   || ||  ||    | ||||||||  |||    
T  26720267 ttgtgagagttaacttaaaatcaggatctgcaggaatcgtggcacgatggctgagcaacgtggcaggat---tggaggtttcaagtttgaggcaaagcac 26720363  T
Q  123 tggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaatttt 222  Q
    ||||||  ||||| ||||||||| || ||  |||||||||||||| | |||||||||| |||| |||| |||||||  || |||||||| | ||||||||    
T  26720364 tggaaaaatcgtggcacgatgggatcgcatcgtggcacgatggtgtgctggcagcgaaaaacagaaacatattttttagtgcagatttgttccaaatttt 26720463  T
Q  223 aagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||| |||||||||||||||||||||| |||||||||||| |||| | ||| ||||| ||||||||| |||||| |||||    
T  26720464 aagcaatacttttactataaatatagaccttgtatcagagcaaacttggagatagagggggctgaaataagggtttagaa 26720543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 110 - 302
Target Start/End: Original strand, 5191456 - 5191648
Alignment:
Q  110 tgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatt 209  Q
    |||||||||  ||||||||  ||||| ||||||||| || ||  |||||||||||||||| |||||||||| |||| |||| |||||||| || ||||||    
T  5191456 tgaggcaaggtactggaaaaatcgtggcacgatgggatctcatcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatt 5191555  T
Q  210 tgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    || | ||||||||||| || |||||||||||||||||||| ||||||||  || |||| | ||| ||||| |||||||||||||||| |||||    
T  5191556 tgttccaaattttaagggaaacttttactataaatatagaccttgtatctaagcaaacttggagatagagggggctgaaacaagggtttagaa 5191648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 154 - 302
Target Start/End: Original strand, 24979554 - 24979702
Alignment:
Q  154 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatctt 253  Q
    ||||||||||||| || ||| |||||||||||||||| ||||||| ||| |||||||| | |||||||||||  ||||||| |||||||||||| | |||    
T  24979554 gtggcacgatggtacgctggtagcgaataacataaacatattttttggtgcagatttgttccaaattttaagtaatactttcactataaatatatacctt 24979653  T
Q  254 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||| ||||| ||||| |||||||||||||||| |||||    
T  24979654 gtatcagagtaaactttgagatagagggggctgaaacaagggtttagaa 24979702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 154 - 296
Target Start/End: Original strand, 32218942 - 32219084
Alignment:
Q  154 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatctt 253  Q
    |||||||||||||||| ||||||||||||| | |||||||||||||||| |||||||| | |||||||||||  ||||||| | |||||||||||| |||    
T  32218942 gtggcacgatggtgcgctggcagcgaataagagaaacgtatttttgggtgcagatttgttccaaattttaagtaatactttcagtataaatatagacctt 32219041  T
Q  254 gtatcagagtaaaccttgagctagagagggctgaaacaagggt 296  Q
    ||||| || ||||| ||||| ||||| ||||||||||||||||    
T  32219042 gtatctgactaaactttgagatagagggggctgaaacaagggt 32219084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 194 - 304
Target Start/End: Original strand, 15780747 - 15780857
Alignment:
Q  194 tttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaag 293  Q
    ||||||||| |||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||||| |||||||||||||    
T  15780747 tttttgggtgcagatttgttccaaattttaagcgatacttttactataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaag 15780846  T
Q  294 ggtatagaatg 304  Q
    ||| |||||||    
T  15780847 ggtttagaatg 15780857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 171 - 304
Target Start/End: Complemental strand, 18097294 - 18097160
Alignment:
Q  171 tggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaacct- 269  Q
    |||| |||||||||| |||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||| ||||||||| ||||||| |     
T  18097294 tggcggcgaataacagaaacgtatttttgggtgcagatttgtttcaaattttaagcgagacttttactataaatatagaccttgtatcatagtaaacttg 18097195  T
Q  270 tgagctagagagggctgaaacaagggtatagaatg 304  Q
     ||| ||||| ||||| |||||||||| |||||||    
T  18097194 agagatagagggggctcaaacaagggtttagaatg 18097160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 154 - 302
Target Start/End: Original strand, 35777269 - 35777416
Alignment:
Q  154 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatctt 253  Q
    |||||||||||||||| ||||||| || ||||||||| ||||||||||| |||||||| | || ||||||||| | ||||||||||||||||||||  ||    
T  35777269 gtggcacgatggtgcgctggcagcaaa-aacataaacatatttttgggtgcagatttgttacagattttaagcaagacttttactataaatatagacatt 35777367  T
Q  254 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||| || |||| ||||| ||||| |||||||||||||||| |||||    
T  35777368 gtatcaaagcaaactttgagatagagggggctgaaacaagggtttagaa 35777416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 154 - 273
Target Start/End: Complemental strand, 10084803 - 10084684
Alignment:
Q  154 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatctt 253  Q
    |||||||||||||||| |||||||||| |||| |||| |||||||| || |||||||| | ||||||||||||||| ||||||||||||||||||| |||    
T  10084803 gtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcgatgcttttactataaatatagacctt 10084704  T
Q  254 gtatcagagtaaaccttgag 273  Q
    ||||| ||| |||| |||||    
T  10084703 gtatcggagcaaactttgag 10084684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 154 - 273
Target Start/End: Complemental strand, 10191723 - 10191604
Alignment:
Q  154 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatctt 253  Q
    |||||||||||||||| |||||||||| |||| |||| |||||||| || || ||||| | ||||||||||||||||||||||||||||||||||| |||    
T  10191723 gtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcaaatttgttccaaattttaagcgatacttttactataaatatagacctt 10191624  T
Q  254 gtatcagagtaaaccttgag 273  Q
    ||||| ||| |||| |||||    
T  10191623 gtatcggagcaaactttgag 10191604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 189 - 302
Target Start/End: Complemental strand, 12268341 - 12268228
Alignment:
Q  189 acgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaa 288  Q
    ||||||||||  || || ||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| | ||||||    
T  12268341 acgtatttttcagtgcaaatttgttccaaattttaagcgatacttttactataaatatagaacttgtatcagagtaaactttgagatagagggagctgaa 12268242  T
Q  289 acaagggtatagaa 302  Q
    ||||| || |||||    
T  12268241 acaagagtttagaa 12268228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 10595567 - 10595424
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg 99  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||  |||||  | |||||||||||||||||||||||  | |||||||| ||||    
T  10595567 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctg-gagaatcgtgccacgatggagaaacattgcgccacgattgttg 10595469  T
Q  100 aag-aattttgtgaggcaagtcactggaaatttcgtgccacgatgg 144  Q
    ||| ||  || ||||| |||  ||||||||||||||||||||||||    
T  10595468 aagcaagattctgagg-aagctactggaaatttcgtgccacgatgg 10595424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 4308844 - 4308543
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg 99  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||| | ||||  | ||||||||||||||| |||| |  ||||||||||| ||||    
T  4308844 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaattctg-gagaatcgtgccacgatgaagaagcttcgtgccacgattgttg 4308746  T
Q  100 aag-aattttgtgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtattttt 198  Q
    ||| ||  || |   |||| ||||||||||  |||||||||||| || ||  |  ||| |||||||||||| | | ||  || || | ||||||||||||    
T  4308745 aagcaaaattctagagcaa-tcactggaaaaatcgtgccacgattggatcgaatcgtgccacgatggtgcgattgaagataaaaata-aaacgtattttt 4308648  T
Q  199 gggtccagatttgcttca-aattttaagcga-tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggt 296  Q
       |  ||||||| ||||   ||||||| || |||||| |||||||||||||| |||||||||||| |||| ||||| ||||| ||||||||||||||||    
T  4308647 -attgaagatttgtttcagttttttaagggattactttcactataaatatagaccttgtatcagagcaaactttgagatagagggggctgaaacaagggt 4308549  T
Q  297 atagaa 302  Q
     |||||    
T  4308548 ttagaa 4308543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 180 - 294
Target Start/End: Original strand, 23633332 - 23633447
Alignment:
Q  180 ataacataaacgtatttttgggtccagatttgcttcaaatttta--agcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctag 277  Q
    |||||| ||||||||||| | | | ||||||| ||| |||||||  || |||||||||||||||||||||||  |||||||||||||||||||||| |||    
T  23633332 ataacagaaacgtattttcgagcctagatttg-ttccaattttatgagggatacttttactataaatatagactttgtatcagagtaaaccttgagatag 23633430  T
Q  278 agagggctgaaacaagg 294  Q
    |||||||| ||||||||    
T  23633431 agagggctaaaacaagg 23633447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 228 - 294
Target Start/End: Original strand, 1313331 - 1313397
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagg 294  Q
    |||||||||||||||||||||| |||| |||||||||||||||||| ||||| ||||||||||||||    
T  1313331 atacttttactataaatatagaccttgaatcagagtaaaccttgagatagagggggctgaaacaagg 1313397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 26 - 142
Target Start/End: Complemental strand, 10949811 - 10949694
Alignment:
Q  26 ttgtgagagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg-aagaattttgtgaggcaagtcact 123  Q
    |||||||||||||||||||||||||| |||| | ||| ||||||||||||||||| |||||||||||||| |||| || ||  |  ||| ||||||||||    
T  10949811 ttgtgagagttaacttaaaatcaggaatctggagaaa-cgtgccacgatggagaagcaacgtgccacgattgttgaaacaagatcctgaagcaagtcact 10949713  T
Q  124 ggaaatttcgtgccacgat 142  Q
    ||||| |||||||||||||    
T  10949712 ggaaaattcgtgccacgat 10949694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 47878707 - 47878606
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg 99  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||  |||||  | |||||||||||||||||||| || || |||||||| ||||    
T  47878707 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctg-gagaatcgtgccacgatggagaagcatcgcgccacgattgttg 47878609  T
Q  100 aag 102  Q
    |||    
T  47878608 aag 47878606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 54192871 - 54192972
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg 99  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||  |||||  | |||||||||||||||||||| || || |||||||| ||||    
T  54192871 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctg-gagaatcgtgccacgatggagaagcatcgcgccacgattgttg 54192969  T
Q  100 aag 102  Q
    |||    
T  54192970 aag 54192972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 237 - 302
Target Start/End: Original strand, 6561740 - 6561805
Alignment:
Q  237 ctataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||| |||||    
T  6561740 ctataaatatagaccttgtatcagagtaaaccttgagatagagggggctgaaacaagggtttagaa 6561805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 35918512 - 35918411
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttga 100  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||| ||     | |||||||||||||||||||| |  ||||||||||| |||||    
T  35918512 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaattatggagaatcgtgccacgatggagaagcttcgtgccacgattgttga 35918413  T
Q  101 ag 102  Q
    ||    
T  35918412 ag 35918411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 227 - 296
Target Start/End: Original strand, 53597161 - 53597229
Alignment:
Q  227 gatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggt 296  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||| ||||||||||||    
T  53597161 gatacttttactataaatatagaccttgtatcagagtaaaccttgagatagag-gggatgaaacaagggt 53597229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 228 - 305
Target Start/End: Complemental strand, 53915832 - 53915755
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatga 305  Q
    |||||||||||||||||||||| |||| ||||||||||||||| || ||||| |||||||||||||||| ||| ||||    
T  53915832 atacttttactataaatatagaccttgaatcagagtaaaccttaagatagagggggctgaaacaagggtttaggatga 53915755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 231 - 302
Target Start/End: Complemental strand, 1627016 - 1626945
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||  ||||||||| |||||||||||| ||||| |||||||||||||||| |||||    
T  1627016 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaa 1626945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 231 - 302
Target Start/End: Original strand, 3314608 - 3314679
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||| ||||||||| |||||||||||| ||||| ||||||||| |||||| |||||    
T  3314608 cttttactataaatatagatattgtatcagtgtaaaccttgagatagagggggctgaaataagggtttagaa 3314679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 231 - 302
Target Start/End: Complemental strand, 5927097 - 5927026
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||  ||||||| | |||||||||||| |||||||||||||||||||||| |||||    
T  5927097 cttttactataaatatagacattgtatcggtgtaaaccttgagatagagagggctgaaacaagggtttagaa 5927026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 227 - 302
Target Start/End: Complemental strand, 28761765 - 28761690
Alignment:
Q  227 gatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||||||  ||| |||||||||||||||||| ||||| ||| |||||||||||| |||||    
T  28761765 gatacttttactataaatatagactttgcatcagagtaaaccttgagatagagggggttgaaacaagggtttagaa 28761690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 16461827 - 16461928
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg 99  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||  |||||  |  ||||||||||||||||||| || || |||||||| ||||    
T  16461827 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctg-gagtatcgtgccacgatggagaagcatcgcgccacgattgttg 16461925  T
Q  100 aag 102  Q
    |||    
T  16461926 aag 16461928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 890104 - 890031
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatg 304  Q
    |||||||||||||||||||| ||||||||| |||||||||||| |||||   |||||||||||||| |||||||    
T  890104 cttttactataaatatagatattgtatcagtgtaaaccttgagatagaggaagctgaaacaagggtttagaatg 890031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 154 - 302
Target Start/End: Complemental strand, 6066206 - 6066058
Alignment:
Q  154 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatctt 253  Q
    |||||||||||||||| |||| |  || || | ||| |||||||||||  |||||||| | || |||||||||   |||||||||||||||||||| |||    
T  6066206 gtggcacgatggtgcgctggcggataaaaata-aaatgtatttttgggagcagatttgttacagattttaagcagaacttttactataaatatagacctt 6066108  T
Q  254 gtatcagagtaaaccttgagctaga-gagggctgaaacaagggtatagaa 302  Q
    |||||| || |||| ||||| |||| | |||||||||||||||| |||||    
T  6066107 gtatcaaagcaaactttgagatagaggggggctgaaacaagggtttagaa 6066058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 27 - 166
Target Start/End: Original strand, 11079169 - 11079309
Alignment:
Q  27 tgtgagagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacga-tggttgaagaattttgtgaggcaagtcactg 124  Q
    ||||||||||||||||||||||| | |||| | ||| ||||||||||||||||| ||||||||||||| || || || ||  |  ||| |||||||||||    
T  11079169 tgtgagagttaacttaaaatcagtaatctggagaaa-cgtgccacgatggagaagcaacgtgccacgattgtttaaaaaagatcctgaagcaagtcactg 11079267  T
Q  125 gaaatttcgtgccacgatggggtcacaaggtggcacgatggt 166  Q
    |||| |||||||||||||||  ||  || |||||||||||||    
T  11079268 gaaaattcgtgccacgatggaatcgtaacgtggcacgatggt 11079309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 228 - 305
Target Start/End: Complemental strand, 53918000 - 53917923
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatga 305  Q
    |||||||||||||||||||||| |||| |||||| ||||||||||| | ||| |||||||||||| ||| ||||||||    
T  53918000 atacttttactataaatatagaccttgaatcagattaaaccttgagatggagggggctgaaacaatggtttagaatga 53917923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 11170121 - 11170189
Alignment:
Q  3 tgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacg 71  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||  ||||||| ||||    
T  11170121 tgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacg 11170189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 232 - 304
Target Start/End: Complemental strand, 27635959 - 27635887
Alignment:
Q  232 ttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatg 304  Q
    |||||||| ||||||||| |||| || ||||||||||||||| ||||| |||||||||||||||| |||||||    
T  27635959 ttttactacaaatatagaccttgaattagagtaaaccttgagatagagggggctgaaacaagggtttagaatg 27635887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 165
Target Start/End: Complemental strand, 27762557 - 27762418
Alignment:
Q  27 tgtgagagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg-aagaattttgtgaggcaagtcactg 124  Q
    ||||||||||||||||||||||||| |||| | ||| ||||||||||||||||| |||||||||||||| |||| || ||  |  |||  ||||||||||    
T  27762557 tgtgagagttaacttaaaatcaggaatctgaagaaa-cgtgccacgatggagaagcaacgtgccacgattgttgaaacaagatcctgaaacaagtcactg 27762459  T
Q  125 gaaatttcgtgccacgatggggtcacaaggtggcacgatgg 165  Q
    |||| || ||||||||||||  ||  || ||||||||||||    
T  27762458 gaaaatttgtgccacgatggaatcgtaacgtggcacgatgg 27762418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 197
Target Start/End: Complemental strand, 47883412 - 47883242
Alignment:
Q  27 tgtgagagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg-aagaattttgtgaggcaagtcactg 124  Q
    ||||||||||||||||||||||||| | || | ||| ||||||||||||||||| ||||||| |||||| |||| || ||  |  ||| |||||||||||    
T  47883412 tgtgagagttaacttaaaatcaggaatttggagaaa-cgtgccacgatggagaagcaacgtgtcacgattgttgaaacaagatcctgatgcaagtcactg 47883314  T
Q  125 gaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttt 197  Q
    |||| |||||||||| ||||  |   || ||||||||||||| |||| | ||  |||||||||||||||||||    
T  47883313 gaaaattcgtgccacaatggaattgtaacgtggcacgatggtacgtt-gaagaaaataacataaacgtatttt 47883242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 10094624 - 10094482
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg 99  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||  |||||  |  ||||| ||||||||||||| || || | |||||||||||    
T  10094624 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctg-gagtatcgttccacgatggagaagcatcgcgtcacgatggttg 10094526  T
Q  100 aagaattttgtgaggcaagtcactggaaatttcgtgccacgatg 143  Q
    ||| |   |    || ||| ||||||||||||||||||||||||    
T  10094525 aagcaagattcctgggaagacactggaaatttcgtgccacgatg 10094482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 231 - 302
Target Start/End: Complemental strand, 28137628 - 28137557
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||    |||||||||||||||||||||| ||||| |||||||||||||||| |||||    
T  28137628 cttttactataaatatatgcgttgtatcagagtaaaccttgagatagagggggctgaaacaagggtttagaa 28137557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 231 - 302
Target Start/End: Complemental strand, 47701928 - 47701857
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||  ||||||||| |||||||||||| || || |||||||||||||||| |||||    
T  47701928 cttttactataaatatagacattgtatcagtgtaaaccttgagataaagggggctgaaacaagggtttagaa 47701857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 10201510 - 10201409
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg 99  Q
    |||||| ||||||| |||||||||||||||||| |||||||||||||||  |||||  |  ||||| ||||||||||||| || || |||||||||||||    
T  10201510 actgatttgaagtcaaggtggagaattgtgagatttaacttaaaatcagaaatctg-gagtatcgttccacgatggagaagcatcgcgccacgatggttg 10201412  T
Q  100 aag 102  Q
    |||    
T  10201411 aag 10201409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 165
Target Start/End: Complemental strand, 20031883 - 20031742
Alignment:
Q  26 ttgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaa-caacgtgccacgatggttgaag-aattttgtgaggcaagtcac 122  Q
    ||||||||||||||||||||||||  ||||| | ||| |||||||||||||||||| ||| |||||||||| ||||||| ||  || ||| | |||||||    
T  20031883 ttgtgagagttaacttaaaatcagaaatctggagaaa-cgtgccacgatggagaaagcaatgtgccacgattgttgaagcaagattctgaaggaagtcac 20031785  T
Q  123 tggaaatttcgtgccacgatggggtcacaaggtggcacgatgg 165  Q
    ||||||  ||||||||||||||  ||  || ||||||||||||    
T  20031784 tggaaaaatcgtgccacgatggaatcgtaacgtggcacgatgg 20031742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 228 - 302
Target Start/End: Original strand, 51943292 - 51943366
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||||| |||| |||||||||||||| ||| ||||| | |||||||||| ||| |||||    
T  51943292 atacttttactataaatatagaccttgaatcagagtaaacctggagatagagggtgctgaaacaaaggtttagaa 51943366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 880785 - 880712
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatg 304  Q
    |||||||||||||||||||  ||||||||| |||||||||||| ||||| || |||||||||| || |||||||    
T  880785 cttttactataaatatagacattgtatcagtgtaaaccttgagatagaggggtctgaaacaagagtttagaatg 880712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 5899431 - 5899657
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaact--taaaatcaggat-ctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggt 97  Q
    |||||| ||||||| |||||||||||||||||||||||||  || ||||||| | ||||| || || || |||||| ||    ||||||| ||||||||     
T  5899431 actgatttgaagtcaaggtggagaattgtgagagttaactcttataatcaggtttctgcataa-tcatggcacgattgaagggcaacgtggcacgatgga 5899529  T
Q  98 tgaagaattttgtgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttt 197  Q
    ||    | ||| | ||||||| |||||||||  || || |||||||||||| ||  |||||||||||||||| ||||||  || || | |||||||||||    
T  5899530 tgttttagttttttaggcaaggcactggaaaaatcatggcacgatggggtcgcatcgtggcacgatggtgcgctggcagataaaaata-aaacgtatttt 5899628  T
Q  198 tgggtccagatttgcttcaaattttaagc 226  Q
    ||||| |||||||| | || |||||||||    
T  5899629 tgggtacagatttgttacagattttaagc 5899657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 204 - 302
Target Start/End: Complemental strand, 6063808 - 6063708
Alignment:
Q  204 cagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaacctt--gagctagagagggctgaaacaagggtataga 301  Q
    |||||||| | || ||||||||| | |||||||||||||||||||| ||||||||| || |||| ||  ||| ||||| |||||||||||||||| ||||    
T  6063808 cagatttgttacagattttaagcaagacttttactataaatatagaccttgtatcaaagcaaactttgagagatagagggggctgaaacaagggtttaga 6063709  T
Q  302 a 302  Q
    |    
T  6063708 a 6063708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 7606989 - 7606940
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcagg 50  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  7606989 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagg 7606940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 229 - 302
Target Start/End: Complemental strand, 51727341 - 51727268
Alignment:
Q  229 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||| |||||||||||||| |||||||||||| |||| ||||| || || |||||||||||||||| |||||    
T  51727341 tactttcactataaatatagaccttgtatcagagcaaactttgagataaagggggctgaaacaagggtttagaa 51727268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 53468788 - 53468715
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatg 304  Q
    |||||||||||||||||||  ||||||||| ||||||||| || || || |||||||||||||||| |||||||    
T  53468788 cttttactataaatatagacattgtatcagtgtaaacctttagataaagggggctgaaacaagggtttagaatg 53468715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 144
Target Start/End: Original strand, 5858196 - 5858314
Alignment:
Q  26 ttgtgagagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag-aattttgtgaggcaagtcact 123  Q
    |||||||||||||||||||||||||| |||| | || |||||||||||||||||| || || |||||||| ||||||| ||  || |||||  ||  |||    
T  5858196 ttgtgagagttaacttaaaatcaggaatctggagaa-tcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctgagg-gagctact 5858293  T
Q  124 ggaaatttcgtgccacgatgg 144  Q
    |||||||||||||||||||||    
T  5858294 ggaaatttcgtgccacgatgg 5858314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 6719543 - 6719471
Alignment:
Q  154 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagc 226  Q
    |||||||||||||||| |||| |||||||||| |||| ||||||||||| |||||||| | || |||||||||    
T  6719543 gtggcacgatggtgcgctggcggcgaataacagaaacatatttttgggtgcagatttgatacagattttaagc 6719471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 10901372 - 10901420
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcag 49  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  10901372 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 10901420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 38889864 - 38889936
Alignment:
Q  154 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagc 226  Q
    |||||||||||||||| |||| |||||||||| |||| ||||||||||| |||||||| | || |||||||||    
T  38889864 gtggcacgatggtgcgctggcggcgaataacagaaacatatttttgggtgcagatttgttacagattttaagc 38889936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 43228006 - 43228054
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcag 49  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  43228006 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcag 43228054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 302
Target Start/End: Original strand, 23636899 - 23637022
Alignment:
Q  180 ataacataaacgtatttttgggtccagatttgcttcaaattt-taagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctaga 278  Q
    |||||| |||| ||||||| || | ||||||| ||||| ||| | || |||| ||||| |||||||||| |  |||||||||||||||||||||| ||||    
T  23636899 ataacagaaacatatttttcggcctagatttgtttcaattttatgagggataattttaatataaatatatactttgtatcagagtaaaccttgagataga 23636998  T
Q  279 gagggctgaaacaagggtatagaa 302  Q
    |  |||| |||||||||| |||||    
T  23636999 ggaggctaaaacaagggtttagaa 23637022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 302
Target Start/End: Complemental strand, 28100374 - 28100303
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||    |||||||||||||| ||||||| ||||| |||||||||||||||| |||||    
T  28100374 cttttactataaatataagcgttgtatcagagtaacccttgagatagagggggctgaaacaagggtttagaa 28100303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 302
Target Start/End: Complemental strand, 43423796 - 43423725
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||  ||||||||  ||||||||||||  |||| |||||||||||||||| |||||    
T  43423796 cttttactataaatatagacattgtatcactgtaaaccttgagaaagagggggctgaaacaagggtttagaa 43423725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 232 - 302
Target Start/End: Original strand, 3306724 - 3306794
Alignment:
Q  232 ttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||||||||||||  ||||||||| |||||||| ||| || || |||||||||||||||| |||||    
T  3306724 ttttactataaatatagacattgtatcagtgtaaacctagagatatagggggctgaaacaagggtttagaa 3306794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 232 - 294
Target Start/End: Original strand, 6231374 - 6231436
Alignment:
Q  232 ttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagg 294  Q
    ||||||||||||||||||  ||||||||| ||||| |||||| ||||| ||||||||||||||    
T  6231374 ttttactataaatatagacattgtatcagtgtaaatcttgagatagagcgggctgaaacaagg 6231436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 229 - 295
Target Start/End: Original strand, 6484307 - 6484373
Alignment:
Q  229 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaaggg 295  Q
    ||||||| ||||||||||||   ||||||||| |||||||||||| ||||| |||||||||||||||    
T  6484307 tacttttgctataaatataggcattgtatcagtgtaaaccttgagatagagggggctgaaacaaggg 6484373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 26 - 143
Target Start/End: Complemental strand, 10208531 - 10208414
Alignment:
Q  26 ttgtgagagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaagaattttgtgaggcaagtcactg 124  Q
    |||||||||||||||||||||||| | |||| |  | |||||||||||||||||| || || |||||||||||||||| |   | |  || ||| |||||    
T  10208531 ttgtgagagttaacttaaaatcagaaatctggagta-tcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagatttctgggaagacactg 10208433  T
Q  125 gaaatttcgtgccacgatg 143  Q
    |||||||||||||||||||    
T  10208432 gaaatttcgtgccacgatg 10208414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 10 - 75
Target Start/End: Complemental strand, 18097439 - 18097374
Alignment:
Q  10 aagtcgaggtggagaattgtgagagttaacttaaaatcagg-atctgcaaaaatcgtgccacgatgg 75  Q
    ||||| |||||||||||||||||||||||||||||||||||  ||||| ||||||||| ||||||||    
T  18097439 aagtcaaggtggagaattgtgagagttaacttaaaatcaggtttctgc-aaaatcgtggcacgatgg 18097374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 231 - 289
Target Start/End: Original strand, 28180948 - 28181006
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaa 289  Q
    |||||||||||||||||||  ||||||||| |||||||||||| ||||| |||||||||    
T  28180948 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaa 28181006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 232 - 302
Target Start/End: Complemental strand, 43421747 - 43421677
Alignment:
Q  232 ttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||||||||||||  ||||||||| |||||||||||| ||||  ||| |||||||||||| |||||    
T  43421747 ttttactataaatatagacattgtatcagtgtaaaccttgagatagaaggggttgaaacaagggtttagaa 43421677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 232 - 302
Target Start/End: Complemental strand, 51675087 - 51675017
Alignment:
Q  232 ttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||||||||||||  ||||||||  |||||| ||||| ||||| |||||||||||||||| |||||    
T  51675087 ttttactataaatatagacgttgtatcaatgtaaacgttgagatagagggggctgaaacaagggtttagaa 51675017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 302
Target Start/End: Original strand, 455824 - 455902
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagc----tagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||||| ||||||||||  |||||||||||     ||||| |||||||||||||||| |||||    
T  455824 atacttttactataaatatagaccttgtatcaggctaaaccttgagagagatagagggggctgaaacaagggtttagaa 455902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 302
Target Start/End: Original strand, 458201 - 458279
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagc----tagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||||| ||||||||||  |||||||||||     ||||| |||||||||||||||| |||||    
T  458201 atacttttactataaatatagaccttgtatcaggctaaaccttgagagagatagagggggctgaaacaagggtttagaa 458279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 6064032 - 6063983
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcagg 50  Q
    |||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  6064032 actgatttgaagtcaaggtggagaattgtgagaattaacttaaaatcagg 6063983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 273
Target Start/End: Complemental strand, 6719471 - 6719402
Alignment:
Q  204 cagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgag 273  Q
    |||||||| | || ||||||||| | |||||||||||||||||||| |||||||||||| |||| |||||    
T  6719471 cagatttgttacagattttaagcaagacttttactataaatatagaccttgtatcagagcaaactttgag 6719402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 296
Target Start/End: Complemental strand, 13420509 - 13420440
Alignment:
Q  227 gatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggt 296  Q
    |||||||||||||||||||||| | |||||||| || |||||||||| || ||  |||||||||||||||    
T  13420509 gatacttttactataaatataggttttgtatcaaagcaaaccttgagatataggaggctgaaacaagggt 13420440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 32218834 - 32218883
Alignment:
Q  25 attgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatg 74  Q
    |||||||||||||||||||||||||| |||||| |||||||| |||||||    
T  32218834 attgtgagagttaacttaaaatcaggttctgcagaaatcgtggcacgatg 32218883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 302
Target Start/End: Complemental strand, 35918284 - 35918211
Alignment:
Q  229 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||| |||||||||||||| ||||||||| || |||  ||||| ||||| |||||||||||||||| |||||    
T  35918284 tactttcactataaatatagaccttgtatcatagcaaattttgagatagagggggctgaaacaagggtttagaa 35918211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 257
Target Start/End: Original strand, 38889936 - 38889989
Alignment:
Q  204 cagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtat 257  Q
    |||||||| | |||||||||||||| |||||||||||||||||||| |||||||    
T  38889936 cagatttgttccaaattttaagcgaaacttttactataaatatagaccttgtat 38889989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 302
Target Start/End: Original strand, 43226008 - 43226081
Alignment:
Q  229 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||| ||||||||||||||  ||||||||||| |||| | ||| ||||| |||||||||||||||| |||||    
T  43226008 tactttcactataaatatagacattgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaa 43226081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 229 - 301
Target Start/End: Original strand, 39715392 - 39715463
Alignment:
Q  229 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtataga 301  Q
    ||||||| |||||||||||||  ||||||||| |||||||||||| ||||| ||||||||| |||||| ||||    
T  39715392 tacttttgctataaatatagacattgtatcagtgtaaaccttgagatagag-gggctgaaataagggtttaga 39715463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 104
Target Start/End: Complemental strand, 25690894 - 25690816
Alignment:
Q  26 ttgtgagagttaacttaaaatcaggat-ctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaagaa 104  Q
    |||||||||||||||||||||||| || ||| |  |||||||||||||||||||| |  ||||||||||| |||||||||    
T  25690894 ttgtgagagttaacttaaaatcagaattctg-atgaatcgtgccacgatggagaagcttcgtgccacgattgttgaagaa 25690816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 231 - 302
Target Start/End: Complemental strand, 28102335 - 28102264
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||    |||||| ||||||| ||||||| ||||| |||||||||||||||| |||||    
T  28102335 cttttactataaatataagcgttgtattagagtaacccttgagatagagggggctgaaacaagggtttagaa 28102264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 231 - 294
Target Start/End: Original strand, 36011751 - 36011814
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagg 294  Q
    |||||||||||||||||||  |||||| || |||||||||||| || || ||||||||||||||    
T  36011751 cttttactataaatatagacattgtattagtgtaaaccttgagataaagggggctgaaacaagg 36011814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 231 - 302
Target Start/End: Original strand, 53591119 - 53591190
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||  |||||| || |||||||||||| |||||  |||||||||||| || |||||    
T  53591119 cttttactataaatatagacattgtataagtgtaaaccttgagatagaggaggctgaaacaagagtttagaa 53591190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 54188160 - 54188234
Alignment:
Q  28 gtgagagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag 102  Q
    |||||||||||||||||||||| | |||| || |||||||||||||||||||| || || |||||||| |||||||    
T  54188160 gtgagagttaacttaaaatcagaaatctg-aagaatcgtgccacgatggagaagcatcgcgccacgattgttgaag 54188234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 262
Target Start/End: Original strand, 5886182 - 5886240
Alignment:
Q  204 cagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagag 262  Q
    |||||||| | || ||||||||||| |||||||||||||||||||| ||| ||||||||    
T  5886182 cagatttgttacagattttaagcgaaacttttactataaatatagaccttttatcagag 5886240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 262
Target Start/End: Original strand, 5899657 - 5899715
Alignment:
Q  204 cagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagag 262  Q
    |||||||| | || ||||||||||| |||||||||||||||||||| ||| ||||||||    
T  5899657 cagatttgttacagattttaagcgagacttttactataaatatagaccttttatcagag 5899715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 143
Target Start/End: Complemental strand, 10100587 - 10100505
Alignment:
Q  61 atcgtgccacgatggagaaacaacgtgccacgatggttgaagaattttgtgaggcaagtcactggaaatttcgtgccacgatg 143  Q
    ||||||||||||||||||| || || |||||||||||||||| |   | |  || ||| ||||||||||||||||||||||||    
T  10100587 atcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagatttctgggaagacactggaaatttcgtgccacgatg 10100505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 302
Target Start/End: Original strand, 50493896 - 50493994
Alignment:
Q  204 cagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||| | || |||||||||   ||||| |||||||||||||| ||||||||| || ||||   ||| ||||| |||||||||||||||| |||||    
T  50493896 cagatttgttacagattttaagcaggactttcactataaatatagaccttgtatcaaagcaaactgagagatagagggggctgaaacaagggtttagaa 50493994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 302
Target Start/End: Complemental strand, 4104235 - 4104157
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagc----tagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||     ||||| |||||||||||||||| |||||    
T  4104235 atacttttactataaatatagaccttgtatcaggctaaactttgagagagatagagggggctgaaacaagggtttagaa 4104157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 11162880 - 11162937
Alignment:
Q  16 aggtggagaattgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgat 73  Q
    ||||||| || |||||||||||||||||||||| ||||||||  ||||||| ||||||    
T  11162880 aggtggaaaactgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgat 11162937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 113 - 226
Target Start/End: Original strand, 25388683 - 25388795
Alignment:
Q  113 ggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgc 212  Q
    |||||| |||||||||  ||||| |||||||||||| ||  |||||||||||||||| ||||||  || || | |||| ||||||||||  ||||||||     
T  25388683 ggcaaggcactggaaaaatcgtggcacgatggggtctcatcgtggcacgatggtgcgctggcagataaaaata-aaacatatttttgggagcagatttgt 25388781  T
Q  213 ttcaaattttaagc 226  Q
    | || |||||||||    
T  25388782 tacagattttaagc 25388795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 231 - 302
Target Start/End: Original strand, 31151271 - 31151344
Alignment:
Q  231 cttttactataaatatagatcttgtatcaga-gtaaaccttgagctagagagggctg-aaacaagggtatagaa 302  Q
    |||||||||||||||||||  |||||||||| |||||||| ||| ||||| |||||| |||||||||| |||||    
T  31151271 cttttactataaatatagactttgtatcagatgtaaacctcgagatagagggggctgaaaacaagggtttagaa 31151344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 229 - 302
Target Start/End: Original strand, 43228213 - 43228286
Alignment:
Q  229 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||| ||||||||||||||  ||||||||||| |||| | ||| ||||| ||||||||||||| || |||||    
T  43228213 tactttcactataaatatagacattgtatcagagcaaacttggagatagagggggctgaaacaagagtttagaa 43228286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 95
Target Start/End: Complemental strand, 13511663 - 13511619
Alignment:
Q  51 atctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatg 95  Q
    ||||| |||||||||||||||||||  ||||||||||||||||||    
T  13511663 atctggaaaaatcgtgccacgatgggaaaacaacgtgccacgatg 13511619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 260
Target Start/End: Original strand, 25388795 - 25388851
Alignment:
Q  204 cagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcag 260  Q
    |||||||| | || ||||||||| | |||||||||||||||||||| ||||||||||    
T  25388795 cagatttgttacagattttaagcaagacttttactataaatatagaccttgtatcag 25388851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 32264580 - 32264532
Alignment:
Q  27 tgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatgg 75  Q
    |||||||||||||||||||||||| | |||| |||||||| ||||||||    
T  32264580 tgtgagagttaacttaaaatcaggttttgcagaaatcgtggcacgatgg 32264532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 48362186 - 48362138
Alignment:
Q  27 tgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatgg 75  Q
    |||||||||||||||||||||||| |||| | |||||||| ||||||||    
T  48362186 tgtgagagttaacttaaaatcaggttctgtagaaatcgtggcacgatgg 48362138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 51727543 - 51727468
Alignment:
Q  27 tgtgagagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag 102  Q
    ||||||||||||||||||||||| | ||||  | |||||||||||||||||||| |  ||||||||||| |||||||    
T  51727543 tgtgagagttaacttaaaatcagaattctg-gagaatcgtgccacgatggagaagcttcgtgccacgattgttgaag 51727468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 227 - 281
Target Start/End: Original strand, 1673895 - 1673950
Alignment:
Q  227 gatacttttactataaatatagatcttgtatc-agagtaaaccttgagctagagag 281  Q
    ||||||||||||||||||||||| |||||||| | ||||||||||||  |||||||    
T  1673895 gatacttttactataaatatagaacttgtatcaaaagtaaaccttgatgtagagag 1673950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 204 - 259
Target Start/End: Original strand, 13893290 - 13893345
Alignment:
Q  204 cagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatca 259  Q
    |||||||| | ||||||||||| | |||||||||||||||||||||  ||||||||    
T  13893290 cagatttgttccaaattttaagggttacttttactataaatatagacattgtatca 13893345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 1321161 - 1321207
Alignment:
Q  27 tgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgat 73  Q
    |||||||||||||||||||||| ||||||||  ||||||| ||||||    
T  1321161 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgat 1321207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 1618995 - 1618949
Alignment:
Q  227 gatacttttactataaatatagatcttgtatcagagtaaaccttgag 273  Q
    |||||||| |||||||||||||| |||||| || |||||||||||||    
T  1618995 gatactttgactataaatatagaccttgtaccatagtaaaccttgag 1618949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 112 - 226
Target Start/End: Original strand, 5886069 - 5886182
Alignment:
Q  112 aggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttg 211  Q
    |||||||  ||||||||  ||||| |||||||||||| ||  |||| ||||||||||| ||||||  || || | |||||||||||||||| || |||||    
T  5886069 aggcaaggtactggaaaaatcgtggcacgatggggtcgcatcgtggtacgatggtgcgctggcagataaaaata-aaacgtatttttgggtgcaaatttg 5886167  T
Q  212 cttcaaattttaagc 226  Q
     | || |||||||||    
T  5886168 ttacagattttaagc 5886182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Original strand, 746672 - 746717
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgag 273  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||    
T  746672 atacttttactataaatatagaccttgtatcaggctaaactttgag 746717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 292
Target Start/End: Complemental strand, 4560602 - 4560537
Alignment:
Q  227 gatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaa 292  Q
    |||||||| ||||||| ||||||   ||||||| ||||||| ||||| ||||| ||||||||||||    
T  4560602 gatactttcactataagtatagactatgtatcatagtaaacattgagatagagggggctgaaacaa 4560537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 268
Target Start/End: Original strand, 4663843 - 4663880
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaacc 268  Q
    |||||||||||||||||||  |||||||||||||||||    
T  4663843 cttttactataaatatagacattgtatcagagtaaacc 4663880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #114
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 10621878 - 10621833
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgag 273  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||    
T  10621878 atacttttactataaatatagaccttgtatcaggctaaactttgag 10621833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #115
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 11008011 - 11007966
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgag 273  Q
    |||||||||||||||||||| | |||||||||||  ||||||||||    
T  11008011 atacttttactataaatataaaccttgtatcagatgaaaccttgag 11007966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #116
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Original strand, 25533355 - 25533400
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgag 273  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||    
T  25533355 atacttttactataaatatagaccttgtatcaggctaaactttgag 25533400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #117
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 261
Target Start/End: Complemental strand, 46966995 - 46966938
Alignment:
Q  204 cagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcaga 261  Q
    |||||||| | ||||||||||| | ||||||||||||||||||| |  ||||||||||    
T  46966995 cagatttgttccaaattttaagggttacttttactataaatataaacattgtatcaga 46966938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #118
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 285
Target Start/End: Complemental strand, 53896556 - 53896475
Alignment:
Q  204 cagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggct 285  Q
    |||||||| | || |||||||||   ||||| |||||||||||||| ||||||||| || |||| ||||| ||||| |||||    
T  53896556 cagatttgttacagattttaagcaggactttcactataaatatagaccttgtatcaaagcaaactttgagatagagggggct 53896475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #119
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 261
Target Start/End: Original strand, 26762839 - 26762919
Alignment:
Q  182 aacataaacgtatttttgggtcc-agatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcaga 261  Q
    ||||||||||||||||| || |  ||||||| | ||| |||| || ||| ||||||||||||||||| | |||||||||||    
T  26762839 aacataaacgtattttttgggcttagatttgttccaattttttagggatgcttttactataaatataaaccttgtatcaga 26762919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #120
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 29914484 - 29914409
Alignment:
Q  27 tgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag 102  Q
    |||| ||||||||||||||||||  |||||  | |||||||||||||||||||| || || |||||||| |||||||    
T  29914484 tgtgggagttaacttaaaatcagaaatctg-gagaatcgtgccacgatggagaagcatcgcgccacgattgttgaag 29914409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #121
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 29963637 - 29963562
Alignment:
Q  27 tgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag 102  Q
    |||| ||||||||||||||||||  |||||  | |||||||||||||||||||| || || |||||||| |||||||    
T  29963637 tgtgggagttaacttaaaatcagaaatctg-gagaatcgtgccacgatggagaagcatcgcgccacgattgttgaag 29963562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #122
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 204 - 260
Target Start/End: Original strand, 38210265 - 38210321
Alignment:
Q  204 cagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcag 260  Q
    |||||||| | || ||||||||| | |||||||||||||||||||  ||||||||||    
T  38210265 cagatttgttacagattttaagcaagacttttactataaatataggccttgtatcag 38210321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #123
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 43225827 - 43225902
Alignment:
Q  27 tgtgagagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag 102  Q
    ||||||||||||||||||||||| | ||||  | |||||||||||||||||||| |  ||||| ||||| |||||||    
T  43225827 tgtgagagttaacttaaaatcagaattctg-gagaatcgtgccacgatggagaagcttcgtgctacgattgttgaag 43225902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #124
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 279
Target Start/End: Complemental strand, 54691906 - 54691858
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagag 279  Q
    ||||||||||||||||||   ||||||||||||||||||| || |||||    
T  54691906 cttttactataaatataggctttgtatcagagtaaaccttaagatagag 54691858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 155; Significance: 4e-82; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 28 - 302
Target Start/End: Original strand, 3747 - 4021
Alignment:
Q  28 gtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaagaattttgtgaggcaagtcactggaa 127  Q
    ||||||||||||||||||| ||||| || | |||||||||||||||||||||||||||||| | |||||||||||| ||| |||| |||||||| |||||    
T  3747 gtgagagttaacttaaaattaggatatgtagaaatcgtgccacgatggagaaacaacgtgctatgatggttgaagattttcgtgaagcaagtcattggaa 3846  T
Q  128 atttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcg 227  Q
    |  | || ||| |||||  |  ||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||     
T  3847 aaatagtaccatgatggaattgcaacgtggcacgatggtgcgatggcagcgaataacataaacgtatttttgggtgcagatttgtttcaaattttaagca 3946  T
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||||| ||||||||||| ||||| ||||| ||||| |||||||||||||||| |||||    
T  3947 atacttttactataaatatagaccttgtatcagactaaactttgagatagagggggctgaaacaagggtttagaa 4021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 155; Significance: 4e-82; HSPs: 99)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 28 - 302
Target Start/End: Original strand, 47274522 - 47274796
Alignment:
Q  28 gtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaagaattttgtgaggcaagtcactggaa 127  Q
    ||||||||||||||||||| ||||| || | |||||||||||||||||||||||||||||| | |||||||||||| ||| |||| |||||||| |||||    
T  47274522 gtgagagttaacttaaaattaggatatgtagaaatcgtgccacgatggagaaacaacgtgctatgatggttgaagattttcgtgaagcaagtcattggaa 47274621  T
Q  128 atttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcg 227  Q
    |  | || ||| |||||  |  ||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||     
T  47274622 aaatagtaccatgatggaattgcaacgtggcacgatggtgcgatggcagcgaataacataaacgtatttttgggtgcagatttgtttcaaattttaagca 47274721  T
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||||| ||||||||||| ||||| ||||| ||||| |||||||||||||||| |||||    
T  47274722 atacttttactataaatatagaccttgtatcagactaaactttgagatagagggggctgaaacaagggtttagaa 47274796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 26 - 304
Target Start/End: Original strand, 48486112 - 48486390
Alignment:
Q  26 ttgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaagaatt---ttgtgaggcaagtcac 122  Q
    |||||||||||||||||||||||||  ||||| |||||||| ||||||||   | ||||||| ||||||   || ||  ||   || |||||||||||||    
T  48486112 ttgtgagagttaacttaaaatcaggtcctgcagaaatcgtggcacgatggctgagcaacgtggcacgat---tggaggtttcagttttgaggcaagtcac 48486208  T
Q  123 tggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaatttt 222  Q
    ||||  ||||||| |||||||||||||||| ||||||| |||||||| ||||||||||||||| |||||||||||||||| |||||||| | ||||||||    
T  48486209 tggatttttcgtggcacgatggggtcacaatgtggcacaatggtgcgctggcagcgaataacagaaacgtatttttgggtgcagatttgttccaaatttt 48486308  T
Q  223 aagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatg 304  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| |||||||||||||||| |||||||    
T  48486309 aagcgatacttttactataaatatagaccttgtatcagagtaaactttgagatagagggggctgaaacaagggtttagaatg 48486390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 36920151 - 36919849
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttga 100  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||     ||||||| ||||||   ||     
T  36920151 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcaggttctgcaaaa-tcgtggcacgatggctgggcaacgtggcacgat---tgg 36920056  T
Q  101 agaatt---ttgtgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttt 197  Q
    ||  ||   || |||||||||||||||||||  ||||| |||||||||||| ||  |||||||||||||||| ||||||||||||  | |||||||||||    
T  36920055 aggtttcaattttgaggcaagtcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcgaatagtagaaacgtatttt 36919956  T
Q  198 tgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttg--agctagagagggctgaaacaaggg 295  Q
    ||||| |||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||  || || || |||||||||||||||    
T  36919955 tgggtgcagatttgttccaaattttaagcgatacttttactataaatatagaccttgtatcagagtaaactttgatagatatagggggctgaaacaaggg 36919856  T
Q  296 tatagaa 302  Q
    | |||||    
T  36919855 tttagaa 36919849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 110 - 304
Target Start/End: Complemental strand, 22803189 - 22802996
Alignment:
Q  110 tgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatt 209  Q
    ||||| ||| |||||||||  ||||| | |||||||||| ||  |||||||||||||||| ||||||||||||||| ||||||||||| | || ||||||    
T  22803189 tgaggaaaggcactggaaaaatcgtggctcgatggggtcgcatcgtggcacgatggtgcgctggcagcgaataacaaaaacgtatttt-gagtgcagatt 22803091  T
Q  210 tgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatg 304  Q
    || | ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| |||||||||||||||| |||||||    
T  22803090 tgttccaaattttaagcgatacttttactataaatatagaccttgtatcagagtaaactttgagatagagggggctgaaacaagggtttagaatg 22802996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 22044956 - 22044654
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttga 100  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||  ||||||| |||||| ||    ||||||| ||||||||  |     
T  22044956 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgattgaagggcaacgtggcacgatggaggt 22044857  T
Q  101 agaattttgt--gaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtattttt 198  Q
       ||||| |  |||||||| |||||||||  ||||| ||||||||| || ||  |||||||||||||| | |||||| ||| |||| |||| |||||||    
T  22044856 ttcattttttttgaggcaaggcactggaaaaatcgtggcacgatgggatcgcatcgtggcacgatggtgtgctggcagggaaaaacagaaacatattttt 22044757  T
Q  199 gggtccagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtat 298  Q
     | | |||||||| | ||||||||||||||||||||||||||||||||||  |||||||||||| |||| | ||| ||||| |||||||||||||||| |    
T  22044756 ag-tgcagatttgttccaaattttaagcgatacttttactataaatataggccttgtatcagagcaaacttggagatagagggggctgaaacaagggttt 22044658  T
Q  299 agaa 302  Q
    ||||    
T  22044657 agaa 22044654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 110 - 273
Target Start/End: Complemental strand, 36921951 - 36921788
Alignment:
Q  110 tgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatt 209  Q
    |||||||||||||||||||  ||||| |||||||||||| ||  ||||||||||||||| |||||||||||||||| |||||||||||||| | ||||||    
T  36921951 tgaggcaagtcactggaaaaatcgtggcacgatggggtcgcattgtggcacgatggtgcattggcagcgaataacagaaacgtatttttggatgcagatt 36921852  T
Q  210 tgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgag 273  Q
    || | ||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||    
T  36921851 tgttccaaattttaagcgatacttttacaataaatatagaccttgtatcagagtaaactttgag 36921788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 110 - 296
Target Start/End: Complemental strand, 619903 - 619717
Alignment:
Q  110 tgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatt 209  Q
    |||||||||||| ||||  ||||||| |||||||||||| ||| ||||||| |||||||| |||| |||||||||| |||| |||||||||||  |||||    
T  619903 tgaggcaagtcattggatttttcgtggcacgatggggtcgcaacgtggcacaatggtgcgctggcggcgaataacagaaacatatttttgggtagagatt 619804  T
Q  210 tgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggt 296  Q
    |  | |||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| ||||||||||||||||    
T  619803 ttttccaaattttaaacgatacttttactataaatatagaccttgtatcagagtaaactttgagatagagggggctgaaacaagggt 619717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 122 - 302
Target Start/End: Original strand, 5198309 - 5198489
Alignment:
Q  122 ctggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattt 221  Q
    |||||||  ||||| ||||||||| |||||  |||||||||||||||| |||||||||| |||| |||| |||||||| || |||||||| | |||||||    
T  5198309 ctggaaaaatcgtggcacgatgggatcacatcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattt 5198408  T
Q  222 taagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||||||||||| |||||||||||| |||| ||||| ||||| |||||||||||||||| |||||    
T  5198409 taagcgatacttttactataaatatagaccttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaa 5198489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 9174710 - 9174410
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttga 100  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||| || ||||| ||||| ||  |  ||||||  ||||||||  |     
T  9174710 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcaggttctgcagaa-tcgtggcacgacggctaggcaacgtagcacgatggaggt 9174612  T
Q  101 agaattttgtgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgg 200  Q
       | ||| | ||||||| |||||||||  || || |||||||||||| ||  |||||||||||||||| |||||| ||| |||| |||| |||||||||    
T  9174611 tttagtttattaggcaaggcactggaaaaatcatggcacgatggggtctcatcgtggcacgatggtgcgctggcagggaaaaacagaaacatatttttgg 9174512  T
Q  201 gtccagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatag 300  Q
    || |||||||| | ||  |||||||| | |||||||||||||||||||| ||||||||| || |||| | ||| ||||| |||||||||||||||| |||    
T  9174511 gtgcagatttgttacagtttttaagcaagacttttactataaatatagaccttgtatcaaagcaaacttggagatagagggggctgaaacaagggtttag 9174412  T
Q  301 aa 302  Q
    ||    
T  9174411 aa 9174410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 114 - 302
Target Start/End: Original strand, 24878870 - 24879058
Alignment:
Q  114 gcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgct 213  Q
    |||||||||||||  ||||||| ||||||||| |  ||| ||||||||||||| || ||||| ||||||||| |||||||||||||||| || ||||| |    
T  24878870 gcaagtcactggatttttcgtggcacgatgggattgcaacgtggcacgatggtacgctggcatcgaataacagaaacgtatttttgggtgcatatttgtt 24878969  T
Q  214 tcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
     ||||||||||||||||||||||||||||||||||| |||||||| |||||||| | ||| ||||| |||||||||| ||||| |||||    
T  24878970 ccaaattttaagcgatacttttactataaatatagaccttgtatccgagtaaacttggagatagagggggctgaaactagggtttagaa 24879058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 110 - 302
Target Start/End: Original strand, 24880328 - 24880520
Alignment:
Q  110 tgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatt 209  Q
    |||||||||||||||||  ||||| | ||||||||| |  ||| |||||||||||||||| ||||||||||||||| |||||||||||||| | ||||||    
T  24880328 tgaggcaagtcactggatttttcgcggcacgatgggattgcaacgtggcacgatggtgcgctggcagcgaataacagaaacgtatttttggatgcagatt 24880427  T
Q  210 tgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    || | ||||||||||||||||||||||||||||||||||| |||||||| |||||||| | ||| ||||| ||||  |||| ||||| |||||    
T  24880428 tgttccaaattttaagcgatacttttactataaatatagaccttgtatcggagtaaacttggagatagagggggcgtaaactagggtttagaa 24880520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 154 - 305
Target Start/End: Complemental strand, 22801273 - 22801123
Alignment:
Q  154 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatctt 253  Q
    ||||||||||||||||  |||||| ||||||| ||||||||||| | || |||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  22801273 gtggcacgatggtgcgccggcagcaaataacagaaacgtatttt-gagtgcagatttgtttcaaattttaagcgatacttttactataaatatagacctt 22801175  T
Q  254 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatga 305  Q
    |||||||||||||| ||||| ||||| |||||||||||||||| ||||||||    
T  22801174 gtatcagagtaaactttgagatagagggggctgaaacaagggtttagaatga 22801123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 112 - 302
Target Start/End: Original strand, 51015125 - 51015315
Alignment:
Q  112 aggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttg 211  Q
    ||||||| |||||||||  | ||| |||||||||||| ||  |||||||||||||||| ||||||||||||||| |||| |||||||  || ||||||||    
T  51015125 aggcaaggcactggaaaaattgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcgaataacagaaacatatttttcagtgcagatttg 51015224  T
Q  212 cttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
     | |||||||||||||||||||||||||||||||||||  ||||||||||| |||| | ||| ||||| |||||||||||||||| |||||    
T  51015225 ttccaaattttaagcgatacttttactataaatatagactttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaa 51015315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 131 - 302
Target Start/End: Complemental strand, 40091850 - 40091679
Alignment:
Q  131 tcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgata 230  Q
    |||||||| ||||||||| ||| ||| |||||||||||  || ||||||||||| |||||||||||||  || || ||||| | ||||||||||||||||    
T  40091850 tcgtgccatgatggggtcgcaacgtgacacgatggtgcactgacagcgaataacgtaaacgtatttttcagtgcatatttgttccaaattttaagcgata 40091751  T
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||||||||||||| ||||||||| ||||||| ||||| ||||| |||||||||||||||| |||||    
T  40091750 cttttactataaatatagaccttgtatcaaagtaaactttgagatagagggggctgaaacaagggtttagaa 40091679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 113 - 302
Target Start/End: Complemental strand, 31850052 - 31849863
Alignment:
Q  113 ggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgc 212  Q
    |||||| |||||||||  || || |||||||||||| ||  |||||||||||||||| |||||||||| |||| |||| |||||||| || ||||||||     
T  31850052 ggcaaggcactggaaaaatcttggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgt 31849953  T
Q  213 ttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    | ||||||||||||||||||||||||| |||||||| ||||||||||||| ||||   ||| ||||| |||||||||||||||| |||||    
T  31849952 tccaaattttaagcgatacttttactagaaatataggtcttgtatcagagcaaactaggagatagagggggctgaaacaagggtttagaa 31849863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 110 - 302
Target Start/End: Original strand, 24888673 - 24888865
Alignment:
Q  110 tgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatt 209  Q
    ||||||||  |||||||||  ||||| ||||||||| || ||  |||||||||||||| | |||||||||| |||| |||| |||||||| || ||||||    
T  24888673 tgaggcaaagcactggaaaaatcgtggcacgatgggatcgcatcgtggcacgatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatt 24888772  T
Q  210 tgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    || | |||||||||||| |||||||||||||||||||||| |||||||||||| |||| | ||| ||||| |||||||||||||||| |||||    
T  24888773 tgttccaaattttaagcaatacttttactataaatatagaccttgtatcagagcaaacttagagatagagggggctgaaacaagggtttagaa 24888865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 110 - 273
Target Start/End: Original strand, 38409076 - 38409239
Alignment:
Q  110 tgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatt 209  Q
    ||||||||  |||||||||  ||||| |||||||||||| ||  ||||||||||||||||||||| ||||| |||| |||| |||||||| || ||||||    
T  38409076 tgaggcaaagcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgttggcggcgaaaaacagaaacatatttttgagtgcagatt 38409175  T
Q  210 tgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgag 273  Q
    || | ||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||    
T  38409176 tgttccaaattttaagcgatacttttactataaatatagaccttgtatcagagcaaactttgag 38409239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 132 - 302
Target Start/End: Complemental strand, 52942881 - 52942710
Alignment:
Q  132 cgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatac 231  Q
    |||| |||||||||||||||| ||||||||||| |||| |||||||||||||||||||| ||||||| ||| |||||||| | |||||||||||  ||||    
T  52942881 cgtggcacgatggggtcacaacgtggcacgatgatgcgctggcagcgaataacataaacatattttttggtgcagatttgttccaaattttaagtaatac 52942782  T
Q  232 ttttactataaatatagatcttg--tatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||| |||||||||||||| ||||  ||||||| ||||| ||||| ||||| |||||||||||||||| |||||    
T  52942781 tttcactataaatatagaccttgtatatcagactaaactttgagatagag-gggctgaaacaagggtttagaa 52942710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 154 - 302
Target Start/End: Original strand, 11434876 - 11435024
Alignment:
Q  154 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatctt 253  Q
    |||||||||||||||| |||||||||| |||| |||| |||||||| || |||||||| | |||||||||||||| |||||||||||||||||||| |||    
T  11434876 gtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcgaaacttttactataaatatagacctt 11434975  T
Q  254 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||| |||| | ||| ||||| |||||||||||||||| |||||    
T  11434976 gtatcagagcaaacttggagatagagggggctgaaacaagggtttagaa 11435024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 110 - 264
Target Start/End: Complemental strand, 3825029 - 3824875
Alignment:
Q  110 tgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatt 209  Q
    ||||||||  |||||||||  || || ||| |||||||| ||  |||||||||||||||||||||  ||||||||| |||||||||||||||| ||||||    
T  3825029 tgaggcaaagcactggaaaaatcatggcacaatggggtcgcatcgtggcacgatggtgcgttggcgacgaataacagaaacgtatttttgggtgcagatt 3824930  T
Q  210 tgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagta 264  Q
    || | |||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  3824929 tgttccaaattttaagcaatacttttactataaatatagaccttgtatcagagta 3824875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 120 - 304
Target Start/End: Complemental strand, 37089820 - 37089633
Alignment:
Q  120 cactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaat 219  Q
    |||||||||  ||||| |||||||||||| ||  |||||||||||||||| |||| |||||||||| |||||||||||| ||| |||||||| | |||||    
T  37089820 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggcgaataacagaaacgtatttttaggtgcagatttgttccaaat 37089721  T
Q  220 tttaagcgatacttttactataaatatagatcttgtatcagagtaaacct---tgagctagagagggctgaaacaagggtatagaatg 304  Q
    ||||||| | |||||||||||||||||||| ||||||||||  ||||| |    ||| ||||| |||||||||||||||| |||||||    
T  37089720 tttaagcaaaacttttactataaatatagaccttgtatcaggctaaacttgagagagatagagggggctgaaacaagggtttagaatg 37089633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 11006807 - 11006546
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcaggatct--gcaaaaatcgtgccacgatggagaaacaacgtgccacgatggtt 98  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||| | |  ||| || ||||| |||||| |     ||||||| ||||||||      
T  11006807 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcaggttttatgcagaa-tcgtggcacgatcgctgggcaacgtggcacgatggag 11006709  T
Q  99 gaagaattttgtgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtattttt 198  Q
    |    | ||| | ||||||| |||||||||  ||||| |||||||||||| ||  |||||||||||||||| ||||||| || |||| |||| |||||||    
T  11006708 gtttcaattttttaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcaaaaaacagaaacatattttt 11006609  T
Q  199 gggtccagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcaga 261  Q
    |||| |||||||| | || ||||||||| | |||||||||||||||||||| |||||||||||    
T  11006608 gggtgcagatttgttacagattttaagcaagacttttactataaatatagaccttgtatcaga 11006546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 153 - 302
Target Start/End: Original strand, 7941239 - 7941390
Alignment:
Q  153 ggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatct 252  Q
    ||||||||||||||||| |||   ||||||||| |||||||||||||||| |||||||| | |||||||||||||| ||||||||||||||||||||  |    
T  7941239 ggtggcacgatggtgcgctggtgacgaataacagaaacgtatttttgggtgcagatttgttccaaattttaagcgaaacttttactataaatatagacgt 7941338  T
Q  253 tgtatcagagtaaacc--ttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||| |||||    ||| ||||| |||||||||||||||| |||||    
T  7941339 tgtatcagagcaaaccgggagagatagagggggctgaaacaagggtttagaa 7941390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 110 - 273
Target Start/End: Complemental strand, 5637924 - 5637762
Alignment:
Q  110 tgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatt 209  Q
    ||||||||| |||||||||  || || ||||||||| || ||  |||||| ||||||| | |||||||||| |||| ||||||||||| |||| ||||||    
T  5637924 tgaggcaaggcactggaaaaatcatgtcacgatgggatcgcatcgtggcatgatggtgagctggcagcgaaaaacagaaacgtatttt-gggtgcagatt 5637826  T
Q  210 tgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgag 273  Q
    || | ||||||||||||||||||||||||||||||||||| ||||||| |||| |||| |||||    
T  5637825 tgttccaaattttaagcgatacttttactataaatatagaccttgtataagagcaaactttgag 5637762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 133 - 302
Target Start/End: Complemental strand, 8756683 - 8756513
Alignment:
Q  133 gtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatact 232  Q
    ||||||||||| | || ||| ||| || | ||||||| |||  |||||||||| |||| ||||| | ||| |||||||| | |||||| ||| |||||||    
T  8756683 gtgccacgatgagatcgcaacgtgccatgttggtgcgctggaggcgaataacagaaacatatttctcggtgcagatttgttccaaattataaacgatact 8756584  T
Q  233 tttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctg-aaacaagggtatagaa 302  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||  |||||| |||||||||| |||||    
T  8756583 tttactataaatatagaccttgtatcagagtaaaccttgagatagaaggggctgaaaacaagggtttagaa 8756513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 137 - 302
Target Start/End: Complemental strand, 22047113 - 22046949
Alignment:
Q  137 cacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatactttta 236  Q
    ||||||||| || ||  |||||||||||||| | |||||| ||| |||| |||| ||||||| | | |||||||| | ||||||||||||||||||||||    
T  22047113 cacgatgggatcgcatcgtggcacgatggtgtgctggcagggaaaaacagaaacatatttttag-tgcagatttgttccaaattttaagcgatactttta 22047015  T
Q  237 ctataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||||||  |||||||| ||| |||| | ||| ||||| |||||||||||||||| |||||    
T  22047014 ctataaatataggccttgtatcggagcaaacttggagatagagggggctgaaacaagggtttagaa 22046949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 171 - 302
Target Start/End: Original strand, 9148190 - 9148322
Alignment:
Q  171 tggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaacctt 270  Q
    ||||||| ||||||| ||||||||||| |||| |||||||| | ||||||||||||||||||||||||||||||||||  |||||||||||| |||| ||    
T  9148190 tggcagcaaataacagaaacgtatttt-gggtgcagatttgttccaaattttaagcgatacttttactataaatataggccttgtatcagagcaaacttt 9148288  T
Q  271 --gagctagagagggctgaaacaagggtatagaa 302  Q
      ||| ||||| |||||||| ||||||| |||||    
T  9148289 gagagatagagggggctgaagcaagggtttagaa 9148322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 27 - 128
Target Start/End: Original strand, 16631068 - 16631169
Alignment:
Q  27 tgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaagaattttgtgaggcaagtcactgga 126  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||  |||| |||||||||||||| ||||||||| ||  ||| |||||||||| ||    
T  16631068 tgtgagagttaacttaaaatcaggttctggaaaaatcgtgccacgattcagaagcaacgtgccacgattgttgaagaagttcctgaagcaagtcactaga 16631167  T
Q  127 aa 128  Q
    ||    
T  16631168 aa 16631169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 16638530 - 16638618
Alignment:
Q  8 tgaagtcgaggtggagaattgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatgg 96  Q
    ||||||| |||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||  |||| ||||||||||| ||||    
T  16638530 tgaagtcaaggtggagaattgtgagagttaacataaaatcaggttctggaaaaatcgtgccacgattcagaagcaacgtgccacaatgg 16638618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 4884505 - 4884606
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg 99  Q
    |||||| ||||||| | ||||||||||||||||||||||||||||||||  |||||  | |||||||||||||||||||| ||||||| |||||| ||||    
T  4884505 actgatttgaagtcaatgtggagaattgtgagagttaacttaaaatcagaaatctg-gagaatcgtgccacgatggagaagcaacgtgtcacgattgttg 4884603  T
Q  100 aag 102  Q
    |||    
T  4884604 aag 4884606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 231 - 305
Target Start/End: Original strand, 19095880 - 19095954
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatga 305  Q
    |||||||||||||||||||  ||||||||| |||||||||||| ||||| |||||||||||||||| ||||||||    
T  19095880 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaatga 19095954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 237 - 302
Target Start/End: Original strand, 19322701 - 19322766
Alignment:
Q  237 ctataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||| |||||    
T  19322701 ctataaatatagatcttgtatcagagtaaaccttgagatagagggggatgaaacaagggtttagaa 19322766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 231 - 302
Target Start/End: Complemental strand, 18537806 - 18537734
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctg-aaacaagggtatagaa 302  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||| |||||||||| |||||    
T  18537806 cttttactataaatatagatcttgtatcagagtaaacattgagatagagggggctgaaaacaagggtttagaa 18537734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 187 - 302
Target Start/End: Original strand, 36378246 - 36378361
Alignment:
Q  187 aaacgtatttttgggtccagatttgcttcaaattt-taagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggct 285  Q
    ||||||||||||||| ||||||||| | ||| ||| | || | |||||||||||||||||||||  |||||||||| ||||||||||| ||||  |||||    
T  36378246 aaacgtatttttggg-ccagatttgttacaattttatgagggttacttttactataaatatagactttgtatcagaataaaccttgagatagacggggct 36378344  T
Q  286 gaaacaagggtatagaa 302  Q
    ||||||||||| |||||    
T  36378345 gaaacaagggtttagaa 36378361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 112 - 211
Target Start/End: Complemental strand, 9176950 - 9176851
Alignment:
Q  112 aggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttg 211  Q
    ||||||| |||||||||  ||||| |||||||||||| ||  |||||||||||||||| |||||| ||| |||| |||| ||||||||||| ||||||||    
T  9176950 aggcaaggcactggaaaaatcgtggcacgatggggtctcatcgtggcacgatggtgcgctggcagggaaaaacagaaacatatttttgggtgcagatttg 9176851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 103 - 226
Target Start/End: Complemental strand, 11009055 - 11008932
Alignment:
Q  103 aattttgtgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggt 202  Q
    |||||| | ||||||| |||||||||  ||||| |||||||||||| ||  |||||||||||||||  ||||||| || |||| |||| |||||||||||    
T  11009055 aatttttttaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcactggcagcaaaaaacagaaacatatttttgggt 11008956  T
Q  203 ccagatttgcttcaaattttaagc 226  Q
     |||||||| | || |||||||||    
T  11008955 gcagatttgttacagattttaagc 11008932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 231 - 302
Target Start/End: Complemental strand, 24446914 - 24446843
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||  ||||||||| |||||||||||| ||||| |||||||||||||||| |||||    
T  24446914 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaa 24446843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 232 - 302
Target Start/End: Complemental strand, 37313400 - 37313330
Alignment:
Q  232 ttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||||||||||| | |||||||| ||||||||||||| ||||| |||||||||||||||| |||||    
T  37313400 ttttactataaatataggttttgtatcaaagtaaaccttgagatagagggggctgaaacaagggtttagaa 37313330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 228 - 305
Target Start/End: Original strand, 5100992 - 5101069
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatga 305  Q
    |||||||||||||||||||||| |||| ||||| |||||||||||| ||||| || ||||||||| ||| ||||||||    
T  5100992 atacttttactataaatatagaccttgaatcagggtaaaccttgagatagaggggactgaaacaaaggtttagaatga 5101069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 15316604 - 15316747
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg 99  Q
    |||||| ||||||| ||||| ||||||||||||||||||||||||||||  |||||  | |||||||||||||||||||| || || | |||||| ||||    
T  15316604 actgatttgaagtcaaggtgaagaattgtgagagttaacttaaaatcagaaatctg-gagaatcgtgccacgatggagaagcatcgcgtcacgattgttg 15316702  T
Q  100 aag-aattttgtgaggcaagtcactggaaatttcgtgccacgatgg 144  Q
    ||| ||  || ||||| |||  ||| ||||||||||||||||||||    
T  15316703 aagcaagattctgagg-aagctactagaaatttcgtgccacgatgg 15316747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 24880232 - 24880293
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcaggatctgcaaaaat 62  Q
    |||||| ||||||| |||||||||||||||| |||||||||||||||||| |||||||||||    
T  24880232 actgatttgaagtcaaggtggagaattgtgaaagttaacttaaaatcaggttctgcaaaaat 24880293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 232 - 305
Target Start/End: Original strand, 56030443 - 56030516
Alignment:
Q  232 ttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatga 305  Q
    |||||||||||||||||   |||||||||||||||||||||| ||||  |||||||||||||||| ||||||||    
T  56030443 ttttactataaatataggctttgtatcagagtaaaccttgagatagaaggggctgaaacaagggtttagaatga 56030516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 180 - 273
Target Start/End: Original strand, 25357583 - 25357677
Alignment:
Q  180 ataacataaacgtatttttgggtccagatttgcttcaaatttta--agcgatacttttactataaatatagatcttgtatcagagtaaaccttgag 273  Q
    |||||| || ||||||||||||  |||||||| ||| |||||||  || ||||||||||||||||||||||| ||||||||| |||||||||||||    
T  25357583 ataacagaatcgtatttttgggctcagatttg-ttccaattttacgagggatacttttactataaatatagaccttgtatcaaagtaaaccttgag 25357677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 197
Target Start/End: Original strand, 25699401 - 25699571
Alignment:
Q  27 tgtgagagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg-aagaattttgtgaggcaagtcactg 124  Q
    ||||||||||||||||||||||||| || | | |||| |||||||||||||||| |||||||||||||| |||| || ||  |  ||| |||||||||||    
T  25699401 tgtgagagttaacttaaaatcaggaatcagaagaaat-gtgccacgatggagaagcaacgtgccacgattgttgaaacaagatcctgaagcaagtcactg 25699499  T
Q  125 gaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttt 197  Q
    |||| |||||| ||||||||  |   || ||||||||||||| || | | ||  |||||||||||||||||||    
T  25699500 gaaaattcgtgacacgatggaattgtaacgtggcacgatggtacgct-gaaggaaataacataaacgtatttt 25699571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 231 - 302
Target Start/End: Complemental strand, 3937543 - 3937473
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||||||||||||| ||| ||||||||||||||||||| ||||| | |||||||||||||| |||||    
T  3937543 cttttactataaatataga-cttttatcagagtaaaccttgagatagagggagctgaaacaagggtttagaa 3937473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 227 - 302
Target Start/End: Complemental strand, 15032875 - 15032800
Alignment:
Q  227 gatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||||||  | ||| |||||||||||||||| || || |||||||||||||||| |||||    
T  15032875 gatacttttactataaatatagacttggtaccagagtaaaccttgagataaagggggctgaaacaagggtttagaa 15032800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 302
Target Start/End: Complemental strand, 16934505 - 16934407
Alignment:
Q  204 cagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||| | || |||||||||   |||||||||||||||||||| ||||||||| || |||| ||||| ||||| ||||||| |||||||| |||||    
T  16934505 cagatttgttacagattttaagcaggacttttactataaatatagaccttgtatcaaagcaaactttgagatagagggggctgatacaagggtttagaa 16934407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 302
Target Start/End: Original strand, 18847124 - 18847222
Alignment:
Q  204 cagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||| | || ||||||||| | |||||||||||||||||||| ||||||||| |  |||| ||||| ||||| ||| |||||||||||| |||||    
T  18847124 cagatttgttacagattttaagcaagacttttactataaatatagaccttgtatcaaaacaaactttgagatagagggggttgaaacaagggtttagaa 18847222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 302
Target Start/End: Complemental strand, 33415821 - 33415751
Alignment:
Q  232 ttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||| ||||||||   |||||||||||||||||||||| ||||| |||||||||||||||| |||||    
T  33415821 ttttactacaaatataggctttgtatcagagtaaaccttgagatagagggggctgaaacaagggtttagaa 33415751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 228 - 302
Target Start/End: Complemental strand, 44600176 - 44600102
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||||| ||||||| | || |||| ||||| ||||| |||||||||||||||| |||||    
T  44600176 atacttttactataaatatagaccttgtattaaagcaaactttgagatagagggggctgaaacaagggtttagaa 44600102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 229 - 302
Target Start/End: Original strand, 6764835 - 6764908
Alignment:
Q  229 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||| |||||||||||||| |||||||||||| |||| ||||| ||||  |||||||||||||||| |||||    
T  6764835 tactttcactataaatatagaccttgtatcagagcaaactttgagatagaaggggctgaaacaagggtttagaa 6764908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 229 - 302
Target Start/End: Original strand, 14633316 - 14633388
Alignment:
Q  229 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||| |||||||||||||| ||||||||||||||||| ||||| |||| ||||||||||||| ||| |||||    
T  14633316 tactttcactataaatatagaccttgtatcagagtaaactttgagataga-agggctgaaacaaaggtttagaa 14633388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 16932386 - 16932337
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcagg 50  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  16932386 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagg 16932337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 22048594 - 22048529
Alignment:
Q  8 tgaagtcgaggtggagaattgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgat 73  Q
    ||||||| || |||||||||||||||||||||||||||||| |||| |||| ||||||| ||||||    
T  22048594 tgaagtcaagttggagaattgtgagagttaacttaaaatcaagatccgcaagaatcgtggcacgat 22048529  T

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Target: chr4; HSP #55
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 143
Target Start/End: Original strand, 40636868 - 40636984
Alignment:
Q  27 tgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag-aattttgtgaggcaagtcactgg 125  Q
    ||||||||||||||||||||||| || |   | |||||||||||||||||||| || || |||||||| ||||||| ||  || ||||| |||  |||||    
T  40636868 tgtgagagttaacttaaaatcagaattttggagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctgagg-aagctactgg 40636966  T
Q  126 aaatttcgtgccacgatg 143  Q
    ||||||||||||||||||    
T  40636967 aaatttcgtgccacgatg 40636984  T

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Target: chr4; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 229 - 302
Target Start/End: Original strand, 40637070 - 40637143
Alignment:
Q  229 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||| |||||||||||||| |||||||||||| |||| | ||| ||||| |||||||||||||||| |||||    
T  40637070 tactttcactataaatatagaccttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaa 40637143  T

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Target: chr4; HSP #57
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 229 - 302
Target Start/End: Original strand, 47868397 - 47868470
Alignment:
Q  229 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||| |||||||||||||| |||||||||||| |||| | ||| ||||||||||||||| |||||| |||||    
T  47868397 tactttcactataaatatagaccttgtatcagagcaaacttggagatagagagggctgaaagaagggtttagaa 47868470  T

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Target: chr4; HSP #58
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 227 - 302
Target Start/End: Complemental strand, 16186176 - 16186100
Alignment:
Q  227 gatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggct-gaaacaagggtatagaa 302  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||  |||| |||||  |||||||||| |||||    
T  16186176 gatacttttactataaatataaaccttgtatcagagtaaaccttgagagagagggggctaaaaacaagggtttagaa 16186100  T

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Target: chr4; HSP #59
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 187 - 302
Target Start/End: Complemental strand, 38928557 - 38928442
Alignment:
Q  187 aaacgtatttttgggtccagatttgcttcaaattt-taagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggct 285  Q
    ||||||||||||||| || |||||  ||| ||||| | || ||| ||||||||||||||||||   |||||| ||||||||||||||| ||||| |||||    
T  38928557 aaacgtatttttggg-cctgattttgttccaatttatgagggattcttttactataaatataggctttgtattagagtaaaccttgagatagagggggct 38928459  T
Q  286 gaaacaagggtatagaa 302  Q
    |||||||| || |||||    
T  38928458 gaaacaagagtttagaa 38928442  T

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Target: chr4; HSP #60
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 40999308 - 40999232
Alignment:
Q  205 agatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagag 281  Q
    ||||||| | ||||||||||| | || |||||||||||||||| | ||| ||||||||||||||||||| |||||||    
T  40999308 agatttgttccaaattttaagggttatttttactataaatataaaccttatatcagagtaaaccttgaggtagagag 40999232  T

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Target: chr4; HSP #61
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 4569704 - 4569747
Alignment:
Q  8 tgaagtcgaggtggagaattgtgagagttaacttaaaatcagga 51  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  4569704 tgaagtcaaggtggagaattgtgagagttaacttaaaatcagga 4569747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 302
Target Start/End: Complemental strand, 9176821 - 9176738
Alignment:
Q  219 ttttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||| | || ||||||||||||||||| ||||||||| || |||| | ||| ||||| |||||||||||||||| |||||    
T  9176821 ttttaagcaagacatttactataaatatagaccttgtatcaaagcaaacttggagatagagggggctgaaacaagggtttagaa 9176738  T

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Target: chr4; HSP #63
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 304
Target Start/End: Complemental strand, 14787771 - 14787693
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaacctt--gagctagagagggctgaaacaagggtatagaatg 304  Q
    |||||||||||||||||||||| ||||||||| | ||||| ||  ||| ||||| |||||||||||||||| |||||||    
T  14787771 atacttttactataaatatagaccttgtatcatactaaactttgagagatagagggggctgaaacaagggtttagaatg 14787693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 302
Target Start/End: Complemental strand, 38270321 - 38270250
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||  ||||||||| |||||||||||| ||||   ||||||||||||||| |||||    
T  38270321 cttttactataaatatagacattgtatcagtgtaaaccttgagatagaagaggctgaaacaagggtttagaa 38270250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 229 - 302
Target Start/End: Complemental strand, 2485210 - 2485136
Alignment:
Q  229 tacttttactataaatatagatcttgtatcagagtaaaccttgagctag-agagggctgaaacaagggtatagaa 302  Q
    |||||| |||||||||||||| |||||||||||| |||| ||||||||| || ||||| |||||||||| |||||    
T  2485210 tactttcactataaatatagaccttgtatcagagcaaactttgagctagaagggggctaaaacaagggtttagaa 2485136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 204 - 302
Target Start/End: Complemental strand, 16932151 - 16932053
Alignment:
Q  204 cagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||| | || |||||||||   |||||||||||||||||| | ||||||||| || |||| ||||| ||||| ||||||| |||||||| |||||    
T  16932151 cagatttgttacagattttaagcaggacttttactataaatataaaccttgtatcaaagcaaactttgagatagagggggctgatacaagggtttagaa 16932053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 22780971 - 22780929
Alignment:
Q  8 tgaagtcgaggtggagaattgtgagagttaacttaaaatcagg 50  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  22780971 tgaagtcaaggtggagaattgtgagagttaacttaaaatcagg 22780929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 235 - 293
Target Start/End: Original strand, 41997494 - 41997552
Alignment:
Q  235 tactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaag 293  Q
    |||||||||||||||  |||||||||||||||||||||| || || |||||||||||||    
T  41997494 tactataaatatagactttgtatcagagtaaaccttgagataaagggggctgaaacaag 41997552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 302
Target Start/End: Original strand, 12102088 - 12102161
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctaga-gagggctg-aaacaagggtatagaa 302  Q
    |||||||||||||||||||||||||||||||  |||||||||| |||| | |||||| |||||||||| |||||    
T  12102088 cttttactataaatatagatcttgtatcagataaaaccttgagatagaggggggctgaaaacaagggtttagaa 12102161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 302
Target Start/End: Complemental strand, 17662576 - 17662498
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagc----tagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||||| |||||||||||| |||| |||||     ||||| |||||||||||||||| |||||    
T  17662576 atacttttactataaatatagaccttgtatcagagcaaactttgagagagatagagggggctgaaacaagggtttagaa 17662498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 231 - 302
Target Start/End: Original strand, 2891314 - 2891386
Alignment:
Q  231 cttttactataaatatagatcttgta-tcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||  ||||| |||| ||||||||| || ||||| |||||||||||||||| |||||    
T  2891314 cttttactataaatatagacattgtaatcagtgtaaaccttaagatagagggggctgaaacaagggtttagaa 2891386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 110 - 226
Target Start/End: Original strand, 18847008 - 18847124
Alignment:
Q  110 tgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatt 209  Q
    |||||||||  ||||||||  |||||  ||||||||||| ||  |||||||||||||||| | || | ||| |||| |||| ||||||||||| ||||||    
T  18847008 tgaggcaaggtactggaaaaatcgtggtacgatggggtcgcatcgtggcacgatggtgcgctcgcggggaaaaacagaaacatatttttgggtgcagatt 18847107  T
Q  210 tgcttcaaattttaagc 226  Q
    || | ||||||| ||||    
T  18847108 tgttacaaatttaaagc 18847124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 231 - 302
Target Start/End: Complemental strand, 18409681 - 18409611
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||  ||||||||| ||||||  |||| |||||| ||||||||||||||| |||||    
T  18409681 cttttactataaatatagaatttgtatcagtgtaaacaatgagatagaga-ggctgaaacaagggtttagaa 18409611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 143
Target Start/End: Original strand, 31300073 - 31300190
Alignment:
Q  26 ttgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag-aattttgtgaggcaagtcact 123  Q
    ||||||||||||||||||||||||  |||||  | |||||||||||||||||||| || |  |||||||| ||||||| ||  || ||||| |||  |||    
T  31300073 ttgtgagagttaacttaaaatcagaaatctg-gagaatcgtgccacgatggagaagcatcacgccacgattgttgaagcaagattctgagg-aagctact 31300170  T
Q  124 ggaaatttcgtgccacgatg 143  Q
    ||||||||||||||||||||    
T  31300171 ggaaatttcgtgccacgatg 31300190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 3825138 - 3825089
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcagg 50  Q
    |||||| ||||||| |||| || |||||||||||||||||||||||||||    
T  3825138 actgatttgaagtcaaggttgacaattgtgagagttaacttaaaatcagg 3825089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 232 - 305
Target Start/End: Original strand, 13543953 - 13544031
Alignment:
Q  232 ttttactataaatatagatcttgtatcaga-gtaaaccttgagc----tagagagggctgaaacaagggtatagaatga 305  Q
    |||||||||||||||||||||||||||||| |||||| |||||     ||||| |||||||||||||| | ||||||||    
T  13543953 ttttactataaatatagatcttgtatcagatgtaaactttgagagagatagagggggctgaaacaaggatctagaatga 13544031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 52043791 - 52043722
Alignment:
Q  205 agatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcaga-gtaaaccttgag 273  Q
    ||||||| | ||| |||| || ||| ||||||||||||||||||| ||||||||||| ||||||||||||    
T  52043791 agatttgttccaattttttagggatgcttttactataaatatagaccttgtatcagatgtaaaccttgag 52043722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 101
Target Start/End: Complemental strand, 7050803 - 7050728
Alignment:
Q  26 ttgtgagagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaa 101  Q
    |||||||||| | ||||||||||||| |||| | ||| ||||||||||| ||||| |||||||||||||| ||||||    
T  7050803 ttgtgagagtcagcttaaaatcaggaatctggagaaa-cgtgccacgatagagaagcaacgtgccacgattgttgaa 7050728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 260
Target Start/End: Complemental strand, 11008932 - 11008876
Alignment:
Q  204 cagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcag 260  Q
    |||||||| | || ||||||||| | |||||||||||||||||||| ||||||||||    
T  11008932 cagatttgttacagattttaagcaagacttttactataaatatagaccttgtatcag 11008876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 11853202 - 11853277
Alignment:
Q  27 tgtgagagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag 102  Q
    ||||||||||||||||||||||| | |||| |  | |||||||||||||||||| || || ||||||||||||||||    
T  11853202 tgtgagagttaacttaaaatcagaaatctggagta-tcgtgccacgatggagaagcatcgcgccacgatggttgaag 11853277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 16489001 - 16489076
Alignment:
Q  27 tgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag 102  Q
    |||||||||||||||||||||||  |||||  | |||||||||||||||||||| || || |||||||| |||||||    
T  16489001 tgtgagagttaacttaaaatcagaaatctg-gagaatcgtgccacgatggagaagcatcgcgccacgattgttgaag 16489076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 273
Target Start/End: Original strand, 36380370 - 36380414
Alignment:
Q  229 tacttttactataaatatagatcttgtatcagagtaaaccttgag 273  Q
    |||||||||||||||||| ||  ||||||||||||||||||||||    
T  36380370 tacttttactataaatatggactttgtatcagagtaaaccttgag 36380414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 231 - 294
Target Start/End: Complemental strand, 12396180 - 12396117
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagg 294  Q
    |||||||||||||||||||  |||||| |  |||||||||||| ||||  ||||||||||||||    
T  12396180 cttttactataaatatagacattgtataaatgtaaaccttgagatagatggggctgaaacaagg 12396117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 231 - 294
Target Start/End: Complemental strand, 12401142 - 12401079
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagg 294  Q
    |||||||||||||||||||  |||||| |  |||||||||||| ||||  ||||||||||||||    
T  12401142 cttttactataaatatagacattgtataaatgtaaaccttgagatagatggggctgaaacaagg 12401079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 229 - 296
Target Start/End: Original strand, 16453305 - 16453372
Alignment:
Q  229 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggt 296  Q
    ||||||| ||||||||||||   ||||||||||| |||||  ||| ||||| ||||||||||||||||    
T  16453305 tacttttgctataaatataggctttgtatcagagcaaaccgagagatagagggggctgaaacaagggt 16453372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 227 - 281
Target Start/End: Original strand, 28453681 - 28453736
Alignment:
Q  227 gatacttttactataaatatagatcttgtatcaga-gtaaaccttgagctagagag 281  Q
    |||| |||||||||||||||||| ||||||||||| || ||||||||| |||||||    
T  28453681 gatatttttactataaatatagaccttgtatcagatgtgaaccttgaggtagagag 28453736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 32 - 75
Target Start/End: Complemental strand, 52943002 - 52942959
Alignment:
Q  32 gagttaacttaaaatcaggatctgcaaaaatcgtgccacgatgg 75  Q
    ||||||||||||||||||| | ||||||||||||| ||||||||    
T  52943002 gagttaacttaaaatcaggttttgcaaaaatcgtggcacgatgg 52942959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 302
Target Start/End: Original strand, 53405122 - 53405199
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagaga---gggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||  ||| |   |||||||||||||||| |||||    
T  53405122 atacttttactataaatatagaccttgtatcaggctaaactttgagagagatagaggggctgaaacaagggtttagaa 53405199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 102
Target Start/End: Original strand, 15311992 - 15312069
Alignment:
Q  25 attgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag 102  Q
    |||||||||||||||||||||||||  |||||  | |||||||||||||||||||| || ||  ||||||| |||||||    
T  15311992 attgtgagagttaacttaaaatcagaaatctg-gagaatcgtgccacgatggagaagcatcgcaccacgattgttgaag 15312069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 16932274 - 16932177
Alignment:
Q  113 ggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttg 211  Q
    |||||| |||||||||  ||||| |||||||||||| ||  |||||||||||||||| |||| |  || || | |||||||||||||||  ||||||||    
T  16932274 ggcaaggcactggaaaaatcgtggcacgatggggtctcatcgtggcacgatggtgcgctggcggataaaaata-aaacgtatttttgggagcagatttg 16932177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 289
Target Start/End: Complemental strand, 18535164 - 18535106
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaa 289  Q
    ||||||| ||||||||||| || |  ||||||||||||||||| ||||| |||||||||    
T  18535164 cttttacaataaatatagacctcgattcagagtaaaccttgagatagagggggctgaaa 18535106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 40091952 - 40091906
Alignment:
Q  29 tgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatgg 75  Q
    |||||||||||||||||||||| ||||||| ||||||| |||| |||    
T  40091952 tgagagttaacttaaaatcaggttctgcaataatcgtggcacggtgg 40091906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 4556552 - 4556511
Alignment:
Q  60 aatcgtgccacgatggagaaacaacgtgccacgatggttgaa 101  Q
    |||||||||||||||||||| |||| ||||||||| ||||||    
T  4556552 aatcgtgccacgatggagaagcaacatgccacgattgttgaa 4556511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 102
Target Start/End: Original strand, 18586615 - 18586691
Alignment:
Q  26 ttgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag 102  Q
    ||||||||||||||||||||||||  |||||  | |||||||||||||||||||| || ||  ||||||| |||||||    
T  18586615 ttgtgagagttaacttaaaatcagaaatctg-gagaatcgtgccacgatggagaagcatcgcaccacgattgttgaag 18586691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 22132737 - 22132692
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgag 273  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||    
T  22132737 atacttttactataaatatagaccttgtatcaggctaaactttgag 22132692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 47211084 - 47211039
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgag 273  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||    
T  47211084 atacttttactataaatatagaccttgtatcaggctaaactttgag 47211039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 6764654 - 6764729
Alignment:
Q  27 tgtgagagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag 102  Q
    ||||||||||||||||||||||| | ||||  | ||||||||||||||| |||| |  ||||||||||| |||||||    
T  6764654 tgtgagagttaacttaaaatcagaattctg-gagaatcgtgccacgatgtagaagcttcgtgccacgattgttgaag 6764729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 102
Target Start/End: Complemental strand, 8631958 - 8631887
Alignment:
Q  31 agagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag 102  Q
    ||||||||||||||||||| | ||||  | |||||||||||||||||||| |  ||||||||||| |||||||    
T  8631958 agagttaacttaaaatcagaattctg-gagaatcgtgccacgatggagaagcttcgtgccacgattgttgaag 8631887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 36922033 - 36921986
Alignment:
Q  27 tgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatgg 75  Q
    |||||||||||||||||||||||| ||||| |||||||||  |||||||    
T  36922033 tgtgagagttaacttaaaatcaggttctgc-aaaatcgtggtacgatgg 36921986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 129; Significance: 1e-66; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 2603 - 2904
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttga 100  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||  ||| ||| |||||| |  |  ||||||| ||||||   ||     
T  2603 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcaagatctgcaggaattgtgacacgattgctaggcaacgtggcacgat---tgg 2699  T
Q  101 agaatt---ttgtgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttt 197  Q
    ||  ||   || |||||||||  ||||||||  ||||| ||||||||| || ||  |||||||||||||||| |||||||||||||||||||||||||||    
T  2700 aggtttcagttttgaggcaaggtactggaaaaatcgtggcacgatgggatcgcatcgtggcacgatggtgcgctggcagcgaataacataaacgtatttt 2799  T
Q  198 tgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggta 297  Q
    ||||| |||||||| | |||||||||||||| |||||||||||||||||||| |||||||||||| |||| ||||| ||||| ||||||||||||||||     
T  2800 tgggtgcagatttgttccaaattttaagcgaaacttttactataaatatagaacttgtatcagagcaaactttgagatagagggggctgaaacaagggtt 2899  T
Q  298 tagaa 302  Q
    |||||    
T  2900 tagaa 2904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 126; Significance: 7e-65; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 27829067 - 27829368
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttga 100  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||| |     ||||||| ||||||||  |     
T  27829067 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcaggatctgcaggaatcgtggcacgattgctgggcaacgtggcacgatggaggt 27829166  T
Q  101 agaattttgtgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgg 200  Q
       ||||| ||||||||  |||||||||  ||||| ||||||||| || ||  |||||||||||||||| |||||||||| |||| |||| ||||||||     
T  27829167 ttcattttttgaggcaaaacactggaaaaatcgtggcacgatgggatcgcatcgtggcacgatggtgcgctggcagcgaaaaacaaaaacatatttttga 27829266  T
Q  201 gtccagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatag 300  Q
    || |||||||| | ||||||||||||||||||||||||||||||||||  |||||||||||| |||| | ||| ||||| |||||||||||||||| |||    
T  27829267 gtgcagatttgttccaaattttaagcgatacttttactataaatataggccttgtatcagagcaaacttggagatagagggggctgaaacaagggtttag 27829366  T
Q  301 aa 302  Q
    ||    
T  27829367 aa 27829368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 15072480 - 15072781
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttga 100  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||  ||||||  ||||||| ||||||||     ||||||| ||||||   ||     
T  15072480 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagattctgcaggaatcgtgacacgatggctgggcaacgtgacacgat---tgg 15072576  T
Q  101 agaatt---ttgtgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttt 197  Q
    ||  ||   || ||| ||||| |||| ||||  ||||| ||||||||| || ||| |||||| ||||||||| ||||||||||||||| |||||||||||    
T  15072577 aggtttcagttttgaagcaagccactagaaaaatcgtgtcacgatgggatcgcaacgtggcatgatggtgcgctggcagcgaataacagaaacgtatttt 15072676  T
Q  198 tgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggta 297  Q
    ||||| || ||||| | ||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| ||||| ||||||||||||||||     
T  15072677 tgggtgcaaatttgttccaaattttaagcgatacttttactataaatatagaccttgtatcagactaaactttgagatagagggggctgaaacaagggtt 15072776  T
Q  298 tagaa 302  Q
    |||||    
T  15072777 tagaa 15072781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 26 - 302
Target Start/End: Original strand, 27826781 - 27827057
Alignment:
Q  26 ttgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaagaattttgtgaggcaagtcactgg 125  Q
    ||||||||||||||||||||||||||||||||  ||||||| |||||| |     ||||||| ||||||||  |    ||||| ||| ||||  ||||||    
T  27826781 ttgtgagagttaacttaaaatcaggatctgcaggaatcgtggcacgattgctgggcaacgtggcacgatggaggtttcattttttgaagcaaagcactgg 27826880  T
Q  126 aaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaag 225  Q
    |||  ||||| ||||||||| || ||  |||||||||||||||| |||||||||| |||| |||| |||||||| || |||||||| | |||||||||||    
T  27826881 aaaaatcgtggcacgatgggatcgcatcgtggcacgatggtgcgctggcagcgaaaaacaaaaacatatttttgagtgcagatttgttccaaattttaag 27826980  T
Q  226 cgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||||||  |||||||||||| |||| | ||| ||||| |||||||||||||||| |||||    
T  27826981 cgatacttttactataaatataggccttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaa 27827057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 110 - 302
Target Start/End: Original strand, 14807631 - 14807822
Alignment:
Q  110 tgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatt 209  Q
    ||||||||  |||||||||  ||||| |||||||||||| ||  |||||||| ||||||| |||||||||| |||||||||||||||| | || ||||||    
T  14807631 tgaggcaaagcactggaaaaatcgtggcacgatggggtcgcatcgtggcacggtggtgcgctggcagcgaaaaacataaacgtatttt-gagtgcagatt 14807729  T
Q  210 tgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    || | ||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||| ||||| |||||||||||||||| |||||    
T  14807730 tgttccaaattttaagcgatacttttactataaatatagaccttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaa 14807822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 114 - 302
Target Start/End: Original strand, 15067864 - 15068052
Alignment:
Q  114 gcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgct 213  Q
    ||||| |||||||||  || |||||||||||| || ||| |||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||| |    
T  15067864 gcaagccactggaaaaatcatgccacgatgggatcgcaacgtggcacgatggtgcgctggcagcgaataacaaaaacgtatttttgggtgcagatttgtt 15067963  T
Q  214 tcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
     ||||||||||||||||||||||||||||||||| | |||||||||   ||||| ||||| ||||  |||||||||||||||| |||||    
T  15067964 ccaaattttaagcgatacttttactataaatataaaccttgtatcaacctaaactttgagatagaaggggctgaaacaagggtttagaa 15068052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 131 - 304
Target Start/End: Complemental strand, 28252001 - 28251829
Alignment:
Q  131 tcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgata 230  Q
    ||||| ||||||||| || ||  |||| |||||||||||||||||||||| |||| ||||||||||| | || |||||||| | ||||||||||||||||    
T  28252001 tcgtggcacgatgggatcgcatcgtggtacgatggtgcgttggcagcgaaaaacagaaacgtatttt-gagtgcagatttgttccaaattttaagcgata 28251903  T
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatg 304  Q
    ||||||||||||||||||| ||||||||| ||||||| ||||| ||||| ||| |||||||||||| |||||||    
T  28251902 cttttactataaatatagaccttgtatcatagtaaactttgagatagagtgggttgaaacaagggtttagaatg 28251829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 27 - 302
Target Start/End: Complemental strand, 12517565 - 12517288
Alignment:
Q  27 tgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaagaatt---ttgtgaggcaagtcact 123  Q
    |||||||||||||||||||||||||||||||  ||||||| ||||||||  |  ||||||| ||||||   || ||  ||   || ||||||||   |||    
T  12517565 tgtgagagttaacttaaaatcaggatctgcaggaatcgtggcacgatggcaaggcaacgtggcacgat---tggaggtttcagttttgaggcaatgtact 12517469  T
Q  124 ggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaatttta 223  Q
    |||||  ||||| ||||||||| || ||  |||||||||||||| | |||||||||| |||| |||| |||||||| || || ||||| | |||||||||    
T  12517468 ggaaaaatcgtggcacgatgggatcgcatcgtggcacgatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcaaatttgttccaaatttta 12517369  T
Q  224 agcgatacttttactataaatatagatcttgtatcagagtaaacctt--gagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||| ||||| | |||||||||||| |||| ||  ||| ||||| |||||||||||||||| |||||    
T  12517368 agcgatacttttactatatatatataccttgtatcagagcaaactttgagagatagagggggctgaaacaagggtttagaa 12517288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 154 - 294
Target Start/End: Original strand, 4423941 - 4424081
Alignment:
Q  154 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatctt 253  Q
    |||||||||||||||| |||||||||| || | |||| |||||||| || |||||||| | ||||||||||||||||||||||||||||||| ||| |||    
T  4423941 gtggcacgatggtgcgctggcagcgaaaaatagaaacatatttttgagtgcagatttgttccaaattttaagcgatacttttactataaatacagacctt 4424040  T
Q  254 gtatcagagtaaaccttgagctagagagggctgaaacaagg 294  Q
    ||||||||| |||| ||||| ||||| ||||||||||||||    
T  4424041 gtatcagagcaaactttgagatagagggggctgaaacaagg 4424081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 154 - 294
Target Start/End: Complemental strand, 2468510 - 2468370
Alignment:
Q  154 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatctt 253  Q
    |||||||||||||||| |||  |||||||||| ||||||||||||  || |||||||| | ||||| ||||||||||||||||||||||||||||| |||    
T  2468510 gtggcacgatggtgcgctggatgcgaataacagaaacgtattttttagtgcagatttgttccaaatgttaagcgatacttttactataaatatagacctt 2468411  T
Q  254 gtatcagagtaaaccttgagctagagagggctgaaacaagg 294  Q
    |||||| ||||||| ||||| ||||| | ||||||||||||    
T  2468410 gtatcaaagtaaactttgagatagagggagctgaaacaagg 2468370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 154 - 302
Target Start/End: Complemental strand, 3886333 - 3886182
Alignment:
Q  154 gtggcacgatggtgcgttggcagcgaataacataaacgtattttt---gggtccagatttgcttcaaattttaagcgatacttttactataaatatagat 250  Q
    |||| ||||||||| | ||||||||||||||| |||| |||||||   |||| || ||||| | |||||||||||||||||||||||||||||||||||     
T  3886333 gtggtacgatggtgtgctggcagcgaataacagaaacatattttttttgggtgcatatttgttccaaattttaagcgatacttttactataaatatagac 3886234  T
Q  251 cttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
     ||||||||||| |||| ||||| ||||| |||||||||||||||| |||||    
T  3886233 tttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaa 3886182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 204 - 302
Target Start/End: Original strand, 18810681 - 18810779
Alignment:
Q  204 cagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||| | ||||||||||| || ||||||||||||||||||||||||||||||||| |||| | ||| ||||| |||||||||||||||| |||||    
T  18810681 cagatttgttacaaattttaagggaaacttttactataaatatagatcttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaa 18810779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 204 - 302
Target Start/End: Original strand, 18812866 - 18812964
Alignment:
Q  204 cagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||| | ||||||||||| || ||||||||||||||||||||||||||||||||| |||| | ||| |||||  ||||||||||||||| |||||    
T  18812866 cagatttgttacaaattttaagggaaacttttactataaatatagatcttgtatcagagcaaacttggagatagaggaggctgaaacaagggtttagaa 18812964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 3275926 - 3276070
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg 99  Q
    |||||| ||||||| ||||||||||||| ||||||||||||||||||||  ||||| | ||| ||||||||||||||||| ||| |||||||||| ||||    
T  3275926 actgatttgaagtcaaggtggagaattgcgagagttaacttaaaatcagaaatctggagaaa-cgtgccacgatggagaagcaatgtgccacgattgttg 3276024  T
Q  100 aag-aattttgtgaggcaagtcactggaaatttcgtgccacgatgg 144  Q
    ||| ||  || ||| | |||||||| ||||  ||||||||||||||    
T  3276025 aagcaagattctgaaggaagtcacttgaaaaatcgtgccacgatgg 3276070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 183 - 302
Target Start/End: Complemental strand, 13858868 - 13858748
Alignment:
Q  183 acataaacgtatttttgggtccagatttgcttcaaattt-taagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagag 281  Q
    |||||||| ||||||||||   ||||||  ||| ||||| | || |||||||||||||||||||||||  |||||||||||||||||||||| ||||| |    
T  13858868 acataaacatatttttgggctgagattttgttccaatttatgagggatacttttactataaatatagactttgtatcagagtaaaccttgagatagaggg 13858769  T
Q  282 ggctgaaacaagggtatagaa 302  Q
    || |||||||||||| |||||    
T  13858768 ggatgaaacaagggtttagaa 13858748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 4813044 - 4812902
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg 99  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||  |||||  |  ||||||||||||||||||| || || |||||||||||||    
T  4813044 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctg-gagtatcgtgccacgatggagaagcatcgcgccacgatggttg 4812946  T
Q  100 aagaattttgtgaggcaagtcactggaaatttcgtgccacgatg 143  Q
    ||| |   |    || ||| ||||||||||||||||||||||||    
T  4812945 aagcaagattcctgggaagacactggaaatttcgtgccacgatg 4812902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 227 - 302
Target Start/End: Complemental strand, 14419530 - 14419455
Alignment:
Q  227 gatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||| ||||| |||||||||||||||| |||||    
T  14419530 gatacttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaa 14419455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 25684270 - 25684412
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg 99  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||  |||||  |  ||||||||||||||||||| || || |||||||||||||    
T  25684270 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctg-gagcatcgtgccacgatggagaagcatcgcgccacgatggttg 25684368  T
Q  100 aagaattttgtgaggcaagtcactggaaatttcgtgccacgatg 143  Q
    ||| |   |    || ||| ||||||||||||||||||||||||    
T  25684369 aagcaagattcctgggaagacactggaaatttcgtgccacgatg 25684412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 228 - 305
Target Start/End: Original strand, 41382670 - 41382747
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatga 305  Q
    |||||||||||||||||||||| |||| |||||||||||||||||| ||||  ||||| |||||||||| ||||||||    
T  41382670 atacttttactataaatatagaccttgaatcagagtaaaccttgagatagatggggctaaaacaagggtttagaatga 41382747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 231 - 302
Target Start/End: Complemental strand, 5623073 - 5623002
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||| | |||||||||| ||||||||||| ||||| |||||||||||||||| |||||    
T  5623073 cttttactataaatataggttttgtatcagaataaaccttgagatagagggggctgaaacaagggtttagaa 5623002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 231 - 302
Target Start/End: Complemental strand, 35872713 - 35872642
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||  ||||||||| |||||||||||| ||||| |||||||||||||||| |||||    
T  35872713 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaa 35872642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 204 - 302
Target Start/End: Original strand, 44720816 - 44720914
Alignment:
Q  204 cagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||| | || ||||||||| | |||||||||||||||||||| ||| ||||| || |||| ||||| ||||| |||||||||||||||| |||||    
T  44720816 cagatttgttacagattttaagcaagacttttactataaatatagaccttatatcaaagcaaactttgagatagagggggctgaaacaagggtttagaa 44720914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 229 - 302
Target Start/End: Original strand, 1225164 - 1225237
Alignment:
Q  229 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||||||||||||||   ||||||||| |||||||||||| ||||| |||||||||||||||| |||||    
T  1225164 tacttttactataaatataggcattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaa 1225237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 229 - 302
Target Start/End: Original strand, 26775199 - 26775272
Alignment:
Q  229 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||||||||||||||   ||||||||||| |||||||||| ||||| |||||||||||||||| |||||    
T  26775199 tacttttactataaatataggctttgtatcagagcaaaccttgagatagagggggctgaaacaagggtttagaa 26775272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 28332259 - 28332359
Alignment:
Q  2 ctgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttga 100  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||  |||||  |  ||||||||||||||||||| || || |||||||||| |||    
T  28332259 ctgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctg-gagcatcgtgccacgatggagaagcatcgcgccacgatggctga 28332357  T
Q  101 ag 102  Q
    ||    
T  28332358 ag 28332359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 228 - 304
Target Start/End: Original strand, 181534 - 181610
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatg 304  Q
    ||||||||||||||||||||||  |||||||||| ||||| ||||| ||||| |||||||||||||||  |||||||    
T  181534 atacttttactataaatatagactttgtatcagactaaactttgagatagagggggctgaaacaagggcttagaatg 181610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 110 - 226
Target Start/End: Original strand, 44720701 - 44720816
Alignment:
Q  110 tgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatt 209  Q
    |||||||||  ||||||||  ||||| |||||||||||| ||  |||||||||||||||| ||||||| || |||| |||| ||||||||||| ||||||    
T  44720701 tgaggcaaggtactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagc-aaaaacagaaacatatttttgggtgcagatt 44720799  T
Q  210 tgcttcaaattttaagc 226  Q
    || | || |||||||||    
T  44720800 tgttacagattttaagc 44720816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 182 - 302
Target Start/End: Complemental strand, 15186095 - 15185974
Alignment:
Q  182 aacataaacgtatttttgggtccagatttgcttcaaatttta--agcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagag 279  Q
    |||| ||||||||||| ||| | ||||||| ||| |||||||  || ||||||||||||||||||||| |  |||||||||||||||||||||| || ||    
T  15186095 aacagaaacgtattttcgggcctagatttg-ttccaattttatgagggatacttttactataaatataaactttgtatcagagtaaaccttgagataaag 15185997  T
Q  280 agggctgaaacaagggtatagaa 302  Q
      | ||||||||||||| |||||    
T  15185996 gtgactgaaacaagggtttagaa 15185974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 18812642 - 18812851
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcagg-atctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg 99  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||  |||| || ||||||| ||||| ||     ||||||| ||||||||  |    
T  18812642 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcaggtttctg-aagaatcgtggcacgacggctgggcaacgtggcacgatggagg 18812740  T
Q  100 aagaattttgtgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttg 199  Q
        | ||| | ||||||| |||||||||  ||||| |||||||||||| ||  |||||||||||||||| |||| |  || || | |||| ||||||||    
T  18812741 ttttagttttttaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttg 18812839  T
Q  200 ggtccagatttg 211  Q
    ||| ||||||||    
T  18812840 ggtgcagatttg 18812851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 231 - 302
Target Start/End: Original strand, 21482322 - 21482393
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||  |||||||||||||||| ||||| ||||| || ||||||||||||| |||||    
T  21482322 cttttactataaatatagaatttgtatcagagtaaactttgagatagagtggactgaaacaagggtttagaa 21482393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 231 - 302
Target Start/End: Complemental strand, 27107232 - 27107161
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||  |||||||||  ||||||||||| ||||| |||||||||||||||| |||||    
T  27107232 cttttactataaatatagacattgtatcagtataaaccttgagatagagggggctgaaacaagggtttagaa 27107161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 231 - 302
Target Start/End: Complemental strand, 33541723 - 33541652
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||  ||||||||| |||||| ||||| ||||| |||||||||||||||| |||||    
T  33541723 cttttactataaatatagacattgtatcagtgtaaacattgagatagagggggctgaaacaagggtttagaa 33541652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 228 - 305
Target Start/End: Original strand, 41384742 - 41384818
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatga 305  Q
    |||||||||||||||||||||| |||| |||| ||||||  ||||| ||||| |||||||||||||||| ||||||||    
T  41384742 atacttttactataaatatagaccttgaatcaaagtaaaaattgagatagag-gggctgaaacaagggtttagaatga 41384818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 60 - 139
Target Start/End: Original strand, 21033553 - 21033632
Alignment:
Q  60 aatcgtgccacgatggagaaacaacgtgccacgatggttgaag-aattttgtgaggcaagtcactggaaatttcgtgccac 139  Q
    |||||||||||||||||||| |||||||||||||| ||||||| || ||||||| || ||||||||||||  |||||||||    
T  21033553 aatcgtgccacgatggagaagcaacgtgccacgattgttgaagcaagtttgtgaagc-agtcactggaaaaatcgtgccac 21033632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 302
Target Start/End: Original strand, 14477276 - 14477347
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||||||||||||   ||||||||||| |||||||||| ||||| ||| |||||||||||| |||||    
T  14477276 cttttactataaatataggctttgtatcagagcaaaccttgagatagagggggttgaaacaagggtttagaa 14477347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 302
Target Start/End: Original strand, 25952521 - 25952592
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||    ||||||||||| |||||||||| ||||| |||||||||||||||| |||||    
T  25952521 cttttactataaatataagctttgtatcagaggaaaccttgagatagagggggctgaaacaagggtttagaa 25952592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 302
Target Start/End: Original strand, 27911011 - 27911086
Alignment:
Q  227 gatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||||| |||||||| ||  ||||||||  |||||||||||| ||||| |||||||||||||||| |||||    
T  27911011 gatacttttacaataaatattgacattgtatcaatgtaaaccttgagatagagggggctgaaacaagggtttagaa 27911086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 302
Target Start/End: Original strand, 27957430 - 27957505
Alignment:
Q  227 gatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||||| |||||||| ||  ||||||||  |||||||||||| ||||| |||||||||||||||| |||||    
T  27957430 gatacttttacaataaatattgacattgtatcaatgtaaaccttgagatagagggggctgaaacaagggtttagaa 27957505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 302
Target Start/End: Original strand, 36865538 - 36865609
Alignment:
Q  232 ttttactataaatatagatcttgtatcaga-gtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||||||||||||  |||||||||| ||||||||| || ||||| |||||||||||||||| |||||    
T  36865538 ttttactataaatatagacattgtatcagatgtaaaccttaagatagagggggctgaaacaagggtttagaa 36865609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 43081698 - 43081745
Alignment:
Q  3 tgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcagg 50  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||    
T  43081698 tgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagg 43081745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 227 - 273
Target Start/End: Original strand, 6375985 - 6376031
Alignment:
Q  227 gatacttttactataaatatagatcttgtatcagagtaaaccttgag 273  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||    
T  6375985 gatacttttactataaatatagaccttgtatcagagtaaacattgag 6376031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 227 - 273
Target Start/End: Original strand, 31162209 - 31162255
Alignment:
Q  227 gatacttttactataaatatagatcttgtatcagagtaaaccttgag 273  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||    
T  31162209 gatacttttactataaatatagaccttgtatcatagtaaaccttgag 31162255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 261
Target Start/End: Original strand, 17847501 - 17847558
Alignment:
Q  204 cagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcaga 261  Q
    |||||||| | |||||||| || ||||||||||||||||||||||| |||||||||||    
T  17847501 cagatttgttccaaattttgagggatacttttactataaatatagaccttgtatcaga 17847558  T

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Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 28895127 - 28895228
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttga 100  Q
    |||||| ||||||| |||||||||||||||||| |||||||||||| |  || |   | ||||||||||||||| |||| || || |||||||| |||||    
T  28895127 actgatttgaagtcaaggtggagaattgtgagacttaacttaaaataaaaattttggagaatcgtgccacgatgtagaagcatcgcgccacgattgttga 28895226  T
Q  101 ag 102  Q
    ||    
T  28895227 ag 28895228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 302
Target Start/End: Original strand, 43530121 - 43530199
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagc----tagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||||| |||||||||||| |||| |||||     ||||| |||||||||||||||| |||||    
T  43530121 atacttttactataaatatagaccttgtatcagagcaaactttgagagagatagagggggctgaaacaagggtttagaa 43530199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 590440 - 590488
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcag 49  Q
    |||||| ||||||| ||||| ||||||||||||||||||||||||||||    
T  590440 actgatttgaagtcaaggtgaagaattgtgagagttaacttaaaatcag 590488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 184 - 281
Target Start/End: Complemental strand, 14419880 - 14419782
Alignment:
Q  184 cataaacgtatttttgggtccagatttgcttcaaattttaagcga--tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagag 281  Q
    ||||||| ||||||| || ||||||||||| ||| ||||| | ||  ||||||| |||||||||||||  ||||||||| |||||||||||| |||||||    
T  14419880 cataaacatattttttgggccagatttgctacaa-ttttatgggagttacttttgctataaatatagacattgtatcagggtaaaccttgagatagagag 14419782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 231 - 302
Target Start/End: Complemental strand, 5372512 - 5372442
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||| ||||||  ||||||||| ||||| |||||| ||||| |||||||||||||||| |||||    
T  5372512 cttttactataattatagacattgtatcagtgtaaatcttgagatagag-gggctgaaacaagggtttagaa 5372442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 16753071 - 16752977
Alignment:
Q  8 tgaagtcgaggtggagaattgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag 102  Q
    ||||||| |||||||||||||||||| |||||||||||||||  |||||  |  ||||||||||||| ||||  || || ||||||||||||||||    
T  16753071 tgaagtcaaggtggagaattgtgagacttaacttaaaatcagaaatctg-gagcatcgtgccacgatagagaggcatcgcgccacgatggttgaag 16752977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 231 - 302
Target Start/End: Complemental strand, 30480838 - 30480767
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||  |||||| || |||||||||||| ||||  ||| |||||||||||| |||||    
T  30480838 cttttactataaatatagacattgtattagtgtaaaccttgagatagaaggggttgaaacaagggtttagaa 30480767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 302
Target Start/End: Original strand, 32339302 - 32339380
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagc----tagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||     ||||| |||||||||||||||| |||||    
T  32339302 atacttttactataaatatagaccttgtatcaggctaaactttgagagagatagagggggctgaaacaagggtttagaa 32339380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 28252122 - 28252078
Alignment:
Q  31 agagttaacttaaaatcaggatctgcaaaaatcgtgccacgatgg 75  Q
    |||||||||||||||||||||||||||  ||||||| ||||||||    
T  28252122 agagttaacttaaaatcaggatctgcaggaatcgtggcacgatgg 28252078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 273
Target Start/End: Original strand, 31035027 - 31035110
Alignment:
Q  190 cgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcaga-gtaaaccttgag 273  Q
    ||||||||||||  |||||||| | ||| |||| || |||| |||||||||||||||||| ||||||||||| |||||| |||||    
T  31035027 cgtatttttgggctcagatttgttccaattttttag-gatatttttactataaatatagaccttgtatcagatgtaaactttgag 31035110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 304
Target Start/End: Complemental strand, 28283563 - 28283481
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaacctt------gagctagagagggctgaaacaagggtatagaatg 304  Q
    |||||||||||||||||||||| ||||||||||  ||||| ||      ||| ||||| |||||||||||||||| |||||||    
T  28283563 atacttttactataaatatagaccttgtatcaggctaaactttgagagagagatagagggggctgaaacaagggtttagaatg 28283481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 143
Target Start/End: Complemental strand, 9021638 - 9021522
Alignment:
Q  27 tgtgagagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag-aattttgtgaggcaagtcactg 124  Q
    ||||||||||||||||||||||| | ||||  | |||||||||||||||||||| || || | |||||| ||||||| ||  || ||||| |||  ||||    
T  9021638 tgtgagagttaacttaaaatcagaattctg-gagaatcgtgccacgatggagaagcatcgcgtcacgattgttgaagcaagattctgagg-aagctactg 9021541  T
Q  125 gaaatttcgtgccacgatg 143  Q
    ||| |||||||||||||||    
T  9021540 gaattttcgtgccacgatg 9021522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Original strand, 15809212 - 15809257
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgag 273  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||    
T  15809212 atacttttactataaatatagaccttgtatcaggctaaactttgag 15809257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 24873525 - 24873480
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgag 273  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||    
T  24873525 atacttttactataaatatagaccttgtatcaggctaaactttgag 24873480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 102
Target Start/End: Complemental strand, 29555318 - 29555242
Alignment:
Q  26 ttgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag 102  Q
    ||||||||||||||||||||||||  |||||  | |||||||| ||||||||||| || || |||||||| |||||||    
T  29555318 ttgtgagagttaacttaaaatcagaaatctg-gagaatcgtgctacgatggagaagcatcgcgccacgattgttgaag 29555242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 22685003 - 22684959
Alignment:
Q  229 tacttttactataaatatagatcttgtatcagagtaaaccttgag 273  Q
    |||||| |||||||||||||| |||||||||||| |||| |||||    
T  22685003 tactttcactataaatatagaccttgtatcagagcaaactttgag 22684959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 37214514 - 37214474
Alignment:
Q  262 gtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||| ||||| |||||||||||||||| |||||    
T  37214514 gtaaaccttgagatagagggggctgaaacaagggtttagaa 37214474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 123; Significance: 4e-63; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 110 - 292
Target Start/End: Original strand, 14851 - 15033
Alignment:
Q  110 tgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatt 209  Q
    |||||||||||||||||||||||||| ||||||||| |||||| ||| |||||||||||| ||||||||||||||| |||| ||||||||||| ||||||    
T  14851 tgaggcaagtcactggaaatttcgtggcacgatgggatcacaacgtgacacgatggtgcgctggcagcgaataacagaaacatatttttgggtgcagatt 14950  T
Q  210 tgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaa 292  Q
    || | ||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||| ||||| ||||||||||||    
T  14951 tgttccaaattttaagcgatacttttactataaatatagaccttgtatcagagcaaactttgagatagagggggctgaaacaa 15033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 121; Significance: 7e-62; HSPs: 86)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 110 - 302
Target Start/End: Complemental strand, 28207524 - 28207332
Alignment:
Q  110 tgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatt 209  Q
    |||||||||||| ||||  |||| || |||||||||||||||| |||||||||||||||| |||| ||||||||||||||||| ||||||||| ||||||    
T  28207524 tgaggcaagtcattggatttttcatggcacgatggggtcacaacgtggcacgatggtgcgctggcggcgaataacataaacgtttttttgggtgcagatt 28207425  T
Q  210 tgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    || | ||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| ||||| |||||||||||||||| |||||    
T  28207424 tgttccaaattttaagcgatacttttactataaatatagaccttgtatcagactaaactttgagatagagggggctgaaacaagggtttagaa 28207332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 51752078 - 51752380
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcaggat-ctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatgg--- 96  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||| | ||||| || ||||| ||||||||     ||||||| ||||||||       
T  51752078 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcaggtttctgcagaa-tcgtggcacgatggttgggcaacgtggcacgatggagg 51752176  T
Q  97 ttgaagaattttgtgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtattt 196  Q
    ||  ||  |||| ||||||||| |||||||||  ||||| |||||||||| | ||  |||||||||||||||| |||| |||||||||||||||||||||    
T  51752177 tttcag--ttttttgaggcaaggcactggaaaaatcgtggcacgatggggccgcatcgtggcacgatggtgcgctggcggcgaataacataaacgtattt 51752274  T
Q  197 ttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggt 296  Q
    |||||| |||||||| | |||||||||||||| |||||||||||||||||||| |||||||||||| |||| | ||| ||||| ||||||||||||| ||    
T  51752275 ttgggtgcagatttgttccaaattttaagcgaaacttttactataaatatagaccttgtatcagagcaaacttggagatagagggggctgaaacaagagt 51752374  T
Q  297 atagaa 302  Q
     |||||    
T  51752375 ttagaa 51752380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 110 - 302
Target Start/End: Original strand, 13214904 - 13215096
Alignment:
Q  110 tgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatt 209  Q
    |||||||||||||||||  ||||||| || |||||| |  ||| |||||||||||||| ||||||||| ||||||| |||||||||||||||| ||||||    
T  13214904 tgaggcaagtcactggatttttcgtggcatgatgggattgcaacgtggcacgatggtgtgttggcagcaaataacaaaaacgtatttttgggtgcagatt 13215003  T
Q  210 tgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    || | ||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||| ||||| |||||||||||||||| |||||    
T  13215004 tgttccaaattttaagcgatacttttactataaatatagaccttgtatcagagtaaattttgagatagagggggctgaaacaagggtttagaa 13215096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 110 - 305
Target Start/End: Complemental strand, 10400286 - 10400091
Alignment:
Q  110 tgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatt 209  Q
    ||||||||  |||||||||| ||||| |||||||||||| ||  |||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||    
T  10400286 tgaggcaaagcactggaaatatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcaaataacataaacgtatttttgggtgcagatt 10400187  T
Q  210 tgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatga 305  Q
    || | |||||||||||||| |||||| ||||||||||||| |||||||||||| ||||   ||| ||||| |||||||||||||||| ||||||||    
T  10400186 tgttccaaattttaagcgaaactttttctataaatatagaccttgtatcagagcaaactgggagatagagggggctgaaacaagggtttagaatga 10400091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 105 - 302
Target Start/End: Original strand, 51749857 - 51750054
Alignment:
Q  105 ttttgtgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtcc 204  Q
    |||| ||||||||| |||||||||  ||||| |||||||||||| ||  |||||||||| ||||| |||| |||||||||| |||||||||||||||| |    
T  51749857 ttttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatagtgcgctggcggcgaataacagaaacgtatttttgggtgc 51749956  T
Q  205 agatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||| | |||||||||||||| |||||||||||||||||||| |||||||||||| |||| | ||| ||||| |||||||||||||||| |||||    
T  51749957 agatttgttccaaattttaagcgaaacttttactataaatatagaccttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaa 51750054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 110 - 302
Target Start/End: Original strand, 13761660 - 13761852
Alignment:
Q  110 tgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatt 209  Q
    ||||||||| |||||||||  ||||| |||||||||||| ||  | |||||||||||| | |||| |||||||||| |||||||||||||||| ||||||    
T  13761660 tgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgcggcacgatggtgtgctggcggcgaataacagaaacgtatttttgggtgcagatt 13761759  T
Q  210 tgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    || | |||||||||||||| |||||||||||||||||||| |||||||||||| |||| | ||| |||||||||||||||||||||| |||||    
T  13761760 tgttccaaattttaagcgaaacttttactataaatatagaccttgtatcagagcaaacttggagatagagagggctgaaacaagggtttagaa 13761852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 110 - 302
Target Start/End: Original strand, 41646743 - 41646935
Alignment:
Q  110 tgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatt 209  Q
    |||||||||||||||||  ||||||| |||| |||| |  ||| |||||||||||||||  ||||||||||||||| |||| ||||||||| | ||||||    
T  41646743 tgaggcaagtcactggatttttcgtggcacggtgggattgcaacgtggcacgatggtgcactggcagcgaataacagaaacatatttttggatgcagatt 41646842  T
Q  210 tgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    || | ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| ||||||||| |||||| |||||    
T  41646843 tgttccaaattttaagcgatacttttactataaatatagaccttgtatcagagtaaactttgagatagagggggctgaaataagggtttagaa 41646935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 20302172 - 20302474
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcaggat-ctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatgg--- 96  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||  | ||||| || ||| | || |||||  |  ||||||| ||||||||       
T  20302172 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagatttctgcagaa-tcgcggcatgatggcaaggcaacgtggcacgatggagg 20302270  T
Q  97 ttgaagaattttgtgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtattt 196  Q
    ||  ||  |||| ||||||||| |||||||||  | ||| |||||||||||| ||  |||||||||||||||| |||| |||||||||| |||| |||||    
T  20302271 tttcag--ttttttgaggcaaggcactggaaaaattgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggcgaataacagaaacatattt 20302368  T
Q  197 ttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggt 296  Q
    |||||| || ||||| | ||||||||||| || ||||||| |||||||||||| |||||||||||| |||| ||||| ||||| ||||||||||||||||    
T  20302369 ttgggtgcatatttgttccaaattttaagtgaaacttttattataaatatagaccttgtatcagagcaaactttgagatagagggggctgaaacaagggt 20302468  T
Q  297 atagaa 302  Q
     |||||    
T  20302469 ttagaa 20302474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 105 - 302
Target Start/End: Original strand, 6823702 - 6823900
Alignment:
Q  105 ttttgtgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtcc 204  Q
    |||| ||||||||| |||||||||  ||||| || ||||||||| ||  |||||||||||||||| |||| ||||||||||||||||||||||||||| |    
T  6823702 ttttttgaggcaaggcactggaaaaatcgtggcatgatggggtcgcatcgtggcacgatggtgcgctggcggcgaataacataaacgtatttttgggtgc 6823801  T
Q  205 agatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctaga-gagggctgaaacaagggtatagaa 302  Q
    ||||||| | |||||||||||||| |||||||||||  ||||||| |||||||||||| |||| ||||| |||| | |||||||||||||||| |||||    
T  6823802 agatttgttccaaattttaagcgaaacttttactatttatatagaccttgtatcagagcaaactttgagatagaggggggctgaaacaagggtttagaa 6823900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 27 - 302
Target Start/End: Original strand, 15823286 - 15823561
Alignment:
Q  27 tgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaagaattt---tgtgaggcaagtcact 123  Q
    |||||||||||||||||||||||||||||||  ||||||| ||||||||     ||||||| ||||||   || ||  ||    | ||||||||  ||||    
T  15823286 tgtgagagttaacttaaaatcaggatctgcaggaatcgtggcacgatggctgggcaacgtggcacgat---tggaggtttcaagtttgaggcaaagcact 15823382  T
Q  124 ggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaatttta 223  Q
     ||||  ||||| |||||||||||| ||  |||||||||||||||| | ||||| ||||||| |||| ||||||||| | |||||||| | |||||||||    
T  15823383 agaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctagcagcaaataacagaaacatatttttggatgcagatttgttccaaatttta 15823482  T
Q  224 agcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||||||||| ||||||||| ||||||| | ||| || || |||||||||||||||| |||||    
T  15823483 agcgatacttttactataaatatagaccttgtatcaaagtaaacttagagataaagggggctgaaacaagggtttagaa 15823561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 27 - 302
Target Start/End: Original strand, 39462258 - 39462534
Alignment:
Q  27 tgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgat----ggttgaagaattttgtgaggcaagtcac 122  Q
    |||||||||||||||||||||||| |||||| |||||||| ||| ||||     ||||||| ||||||    ||||  ||    || ||||||||||||     
T  39462258 tgtgagagttaacttaaaatcaggttctgcagaaatcgtgacacaatggttgggcaacgtggcacgattagaggtttcag----ttttgaggcaagtcag 39462353  T
Q  123 tggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtattttt-gggtccagatttgcttcaaattt 221  Q
    ||||  ||||||| ||||||||| |  ||| |||||||||||||||| | |||| |||||||| |||||||||||| |||| |||||||| | |||||||    
T  39462354 tggatttttcgtggcacgatgggattgcaatgtggcacgatggtgcgcttgcagtgaataacagaaacgtattttttgggtgcagatttgttccaaattt 39462453  T
Q  222 taagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||  ||||||| |||||||||||||| ||||||||||||||||| ||||| |||||| ||||||||||| ||| |||||    
T  39462454 taagtaatactttcactataaatatagaccttgtatcagagtaaactttgagatagagaaggctgaaacaaaggtttagaa 39462534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 154 - 296
Target Start/End: Original strand, 47451515 - 47451657
Alignment:
Q  154 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatctt 253  Q
    |||||||||||||||| || |||||||||||| |||||||||||| ||| |||||||| | ||||| ||||||||||||||||||||||||||||| |||    
T  47451515 gtggcacgatggtgcgctgacagcgaataacagaaacgtattttttggtgcagatttgttccaaatattaagcgatacttttactataaatatagacctt 47451614  T
Q  254 gtatcagagtaaaccttgagctagagagggctgaaacaagggt 296  Q
    |||||||||||||| ||||| ||||| ||||| ||||||||||    
T  47451615 gtatcagagtaaactttgagatagagggggcttaaacaagggt 47451657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 28842207 - 28842510
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttga 100  Q
    |||||| ||||||| |||||||||||||||| ||||||||||||||||||||||| |  ||||||| ||||||||  |  | ||||| ||||||   ||     
T  28842207 actgatttgaagtcaaggtggagaattgtgaaagttaacttaaaatcaggatctgtaggaatcgtggcacgatggcaaggctacgtggcacgat---tgg 28842303  T
Q  101 agaatt---ttgtgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttt 197  Q
    ||  ||   || | |||||||  ||||||||  ||||| ||||||||| || ||  ||||||||||||||   |||||||||| |||| |||| ||||||    
T  28842304 aggtttcagtttttaggcaaggtactggaaaaatcgtggcacgatgggatcgcatcgtggcacgatggtgtcctggcagcgaaaaacagaaacatatttt 28842403  T
Q  198 tgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaacctt--gagctagagagggctgaaacaaggg 295  Q
    || || || ||||| | ||||||||||||||||||||||||||||||||| | |||||||||||| |||| ||  ||| ||||| |||||||||||||||    
T  28842404 tgagtgcaaatttgttccaaattttaagcgatacttttactataaatataaaccttgtatcagagcaaactttgagagatagagggggctgaaacaaggg 28842503  T
Q  296 tatagaa 302  Q
    | |||||    
T  28842504 tttagaa 28842510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 114 - 289
Target Start/End: Complemental strand, 30790848 - 30790673
Alignment:
Q  114 gcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgct 213  Q
    |||||||||||||||   |||| ||||||||| || ||| |||||||||||||||| |||  | ||| |||||||||||||||||  || |||||||| |    
T  30790848 gcaagtcactggaaaaaacgtggcacgatgggatcgcaatgtggcacgatggtgcgctggaggggaaaaacataaacgtatttttcagtgcagatttgtt 30790749  T
Q  214 tcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaa 289  Q
     |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||| | |||||||    
T  30790748 ccaaattttaagcgatacttttactataaatatagacattgtatcagagtaaaccttgagatagagggagctgaaa 30790673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 154 - 293
Target Start/End: Complemental strand, 38925892 - 38925753
Alignment:
Q  154 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatctt 253  Q
    |||||||||||| |||||||||||||| |||| ||  |||||||||||| |||||||  | ||||||||||||||||||||||||||||||||||| |||    
T  38925892 gtggcacgatggggcgttggcagcgaacaacagaagtgtatttttgggtgcagatttattccaaattttaagcgatacttttactataaatatagacctt 38925793  T
Q  254 gtatcagagtaaaccttgagctagagagggctgaaacaag 293  Q
    |||||||||||||| ||||| ||||| |||||||||||||    
T  38925792 gtatcagagtaaactttgagatagagggggctgaaacaag 38925753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 154 - 302
Target Start/End: Original strand, 6822882 - 6823030
Alignment:
Q  154 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatctt 253  Q
    |||||||||||||||| |||| |||||||| | ||| |||||||||||| |||||||| | |||||||||||||| |||||||||||  ||||||| |||    
T  6822882 gtggcacgatggtgcgctggcggcgaataatagaaatgtatttttgggtgcagatttgttccaaattttaagcgaaacttttactatttatatagacctt 6822981  T
Q  254 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||| |||| ||||| ||||| |||||||||||||||| |||||    
T  6822982 gtatcagagcaaactttgagatagagggggctgaaacaagggtttagaa 6823030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 27 - 273
Target Start/End: Original strand, 28840418 - 28840664
Alignment:
Q  27 tgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaagaatt---ttgtgaggcaagtcact 123  Q
    ||||| |||||||||||||||||||||||||  ||||||| ||||||||  |  ||||||| ||||||   || ||  ||   || | |||||||  |||    
T  28840418 tgtgaaagttaacttaaaatcaggatctgcaggaatcgtggcacgatggcaaggcaacgtggcacgat---tggaggtttcagtttttaggcaaggtact 28840514  T
Q  124 ggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaatttta 223  Q
    |||||  | ||| ||||||||| || ||  |||||||||||||| | |||||||||| |||| |||| |||||||| || |||||||| | |||||||||    
T  28840515 ggaaaaattgtggcacgatgggatcgcatcgtggcacgatggtgtgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaatttta 28840614  T
Q  224 agcgatacttttactataaatatagatcttgtatcagagtaaaccttgag 273  Q
    |||||||||||||||||||||||||| |||||||||||| |||| |||||    
T  28840615 agcgatacttttactataaatatagaccttgtatcagagcaaactttgag 28840664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 110 - 296
Target Start/End: Complemental strand, 3580076 - 3579888
Alignment:
Q  110 tgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatt 209  Q
    |||||||||||| ||||||  |||||  ||| |||| |  ||| |||||||||||||||| |||| ||||||| |||||||||||||| | || || |||    
T  3580076 tgaggcaagtcattggaaaaatcgtggtacggtgggattgcaacgtggcacgatggtgcgctggcggcgaatatcataaacgtattttagagtgcaaatt 3579977  T
Q  210 tgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctaga--gagggctgaaacaagggt 296  Q
    || | |||||||||||||||||||||||| |||||||||| |||||||||| |||||  ||||| ||||  | ||||||||||||||||    
T  3579976 tgttccaaattttaagcgatacttttactttaaatatagaccttgtatcagcgtaaaatttgagatagagggggggctgaaacaagggt 3579888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 157 - 292
Target Start/End: Complemental strand, 14098380 - 14098246
Alignment:
Q  157 gcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatcttgta 256  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||| ||| | |||||||||||  ||||||| |||||||||||||| ||||||    
T  14098380 gcacgatggtgcgctggcagcgaataacataaacgtatttttgggtgcaga-ttgttccaaattttaagtaatactttcactataaatatagaccttgta 14098282  T
Q  257 tcagagtaaaccttgagctagagagggctgaaacaa 292  Q
    ||| | ||||| ||||| ||||| || |||||||||    
T  14098281 tcaaactaaactttgagatagaggggactgaaacaa 14098246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 154 - 243
Target Start/End: Original strand, 49687407 - 49687496
Alignment:
Q  154 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaa 243  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||    
T  49687407 gtggcacgatggtgcgctgacagcgaataacataaacgtatttttgggtgcagatttgttccaaattttaagcgatacttttactataaa 49687496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 14183923 - 14183850
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatg 304  Q
    ||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  14183923 cttttactataaatatagaccatgtatcagagtaaaccttgagatagagagggctgaaacaagggtttagaatg 14183850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 9526091 - 9526233
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg 99  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||  |||||  |  ||||||||||||||||||| || || |||||||||||||    
T  9526091 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctg-gagcatcgtgccacgatggagaagcatcgcgccacgatggttg 9526189  T
Q  100 aagaattttgtgaggcaagtcactggaaatttcgtgccacgatg 143  Q
    ||| |   | |  || ||| ||||||||||||||||||||||||    
T  9526190 aagcaagatttctgggaagacactggaaatttcgtgccacgatg 9526233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 227 - 296
Target Start/End: Complemental strand, 49495540 - 49495471
Alignment:
Q  227 gatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggt 296  Q
    |||||||||||||||||||||||  |||||||||||||||||||||| ||||| ||||||||||||||||    
T  49495540 gatacttttactataaatatagactttgtatcagagtaaaccttgagatagagggggctgaaacaagggt 49495471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 14098536 - 14098437
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttga 100  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||  |||||| |||||||| ||||||||   | || |||| ||||||||||||    
T  14098536 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagattctgcagaaatcgtggcacgatggctgagcaccgtggcacgatggttga 14098437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 180 - 302
Target Start/End: Original strand, 42922126 - 42922249
Alignment:
Q  180 ataacataaacgtatttttgggtccagatttgcttcaaattt-taagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctaga 278  Q
    ||||||||| | ||||||||||   ||||||| | ||||||| | || |||||||||||||||||||||||| ||||||||||||||||||| || ||||    
T  42922126 ataacataatcatatttttgggctgagatttgttccaaatttatgagggatacttttactataaatatagattttgtatcagagtaaaccttaagataga 42922225  T
Q  279 gagggctgaaacaagggtatagaa 302  Q
    | ||| ||||| |||||| |||||    
T  42922226 gggggttgaaataagggtttagaa 42922249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 204 - 302
Target Start/End: Original strand, 16231518 - 16231616
Alignment:
Q  204 cagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||| | || ||||||||| | |||||||||||||||||||| ||||||||| || |||| ||||| ||||| |||||||||||||||| |||||    
T  16231518 cagatttgttacagattttaagcaagacttttactataaatatagaccttgtatcaaagcaaactttgagatagagggggctgaaacaagggtctagaa 16231616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 227 - 302
Target Start/End: Complemental strand, 18800910 - 18800835
Alignment:
Q  227 gatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| || |  |||||||||||| ||| |||||    
T  18800910 gatacttttactataaatatagaccttgtatcagagtaaaccttgagatacaaggggctgaaacaaaggtttagaa 18800835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 232 - 302
Target Start/End: Original strand, 17318838 - 17318908
Alignment:
Q  232 ttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||||||||||| | |||||||| ||||||||||||| ||||| |||||||||||||||| |||||    
T  17318838 ttttactataaatataggttttgtatcatagtaaaccttgagatagagggggctgaaacaagggtttagaa 17318908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 232 - 302
Target Start/End: Complemental strand, 25251611 - 25251541
Alignment:
Q  232 ttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||||||||||||  |||||||||||||||||||||| ||||| |||||||||||| ||| |||||    
T  25251611 ttttactataaatatagactttgtatcagagtaaaccttgagatagagggggctgaaacaaaggtttagaa 25251541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 228 - 305
Target Start/End: Complemental strand, 2949571 - 2949494
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatga 305  Q
    |||||||||| |||||||||||| ||| ||| ||| |||||||||| ||||| |||||||||||||||| ||||||||    
T  2949571 atacttttacaataaatatagatattgaatccgagaaaaccttgagatagagggggctgaaacaagggtttagaatga 2949494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 228 - 305
Target Start/End: Complemental strand, 28998593 - 28998516
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatga 305  Q
    ||||||||||||||||||||||  ||| |||||||||||| ||||| |||||  ||||||||||||||| ||||||||    
T  28998593 atacttttactataaatatagactttgaatcagagtaaactttgagatagaggaggctgaaacaagggtttagaatga 28998516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 228 - 305
Target Start/End: Complemental strand, 29004309 - 29004232
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatga 305  Q
    ||||||||||||||||||||||  ||| |||||||||||| ||||| |||||  ||||||||||||||| ||||||||    
T  29004309 atacttttactataaatatagactttgaatcagagtaaactttgagatagaggaggctgaaacaagggtttagaatga 29004232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 206 - 302
Target Start/End: Complemental strand, 50079184 - 50079087
Alignment:
Q  206 gatttgcttcaaattt-taagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||| ||||||||| | || ||| |||||||||||||||||||  |||||| || |||||||||||| ||||| |||||||||||||||| |||||    
T  50079184 gatttggttcaaatttatgagggatgcttttactataaatatagacattgtattagtgtaaaccttgagatagagggggctgaaacaagggtttagaa 50079087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 227 - 302
Target Start/End: Complemental strand, 8349390 - 8349314
Alignment:
Q  227 gatacttttactataaatatagatcttgtatcaga-gtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||| ||||| |||||||||||||||||||| ||| | |||||||||| |||||||||||||||||||||| |||||    
T  8349390 gataattttattataaatatagatcttgtattagatgcaaaccttgagatagagagggctgaaacaagggtttagaa 8349314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 13461392 - 13461340
Alignment:
Q  27 tgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatggagaa 79  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  13461392 tgtgagagttaacttaaaatcaggatctgcaggaatcgtgccacgatggagaa 13461340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 165
Target Start/End: Original strand, 25133681 - 25133820
Alignment:
Q  27 tgtgagagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag-aattttgtgaggcaagtcactg 124  Q
    ||||||||||||||||||||||||| |||| | ||| |||| |||||||||||| |||||||||||||| ||||||| ||  |  | | |||||||| ||    
T  25133681 tgtgagagttaacttaaaatcaggaatctggagaaa-cgtgtcacgatggagaagcaacgtgccacgattgttgaagcaagatcctaaagcaagtcattg 25133779  T
Q  125 gaaatttcgtgccacgatggggtcacaaggtggcacgatgg 165  Q
    ||||  ||||||||||||||  ||| || ||||||||||||    
T  25133780 gaaaaatcgtgccacgatggaatcataacgtggcacgatgg 25133820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 2393838 - 2393760
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaa 79  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||  |||||  | ||||||||||||||||||||    
T  2393838 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctg-gagaatcgtgccacgatggagaa 2393760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 231 - 302
Target Start/End: Complemental strand, 11457812 - 11457741
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||  ||||||||| |||||||||||| ||||| |||||||||||| ||| |||||    
T  11457812 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaatggtttagaa 11457741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 231 - 302
Target Start/End: Complemental strand, 17186465 - 17186394
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||| ||||||||||||| ||||||||||| |||||||||| ||||| ||||||||| |||||| |||||    
T  17186465 cttttaatataaatatagattttgtatcagagcaaaccttgagatagagggggctgaaataagggtttagaa 17186394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 227 - 302
Target Start/End: Complemental strand, 31423215 - 31423140
Alignment:
Q  227 gatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||||    ||||||||| |||||||||||| ||||| |||||||||||||||| |||||    
T  31423215 gatacttttactataaatataagcattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaa 31423140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 231 - 294
Target Start/End: Complemental strand, 50077009 - 50076946
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagg 294  Q
    |||||||||||||||||||  ||||||||| |||||||||||| |||| |||||||||||||||    
T  50077009 cttttactataaatatagacattgtatcagtgtaaaccttgagatagaaagggctgaaacaagg 50076946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 302
Target Start/End: Original strand, 18307054 - 18307124
Alignment:
Q  232 ttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||| |||||||||||||  ||||||||| |||||||||||| ||||| |||||||||||||||| |||||    
T  18307054 ttttgctataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaa 18307124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 302
Target Start/End: Complemental strand, 25248850 - 25248780
Alignment:
Q  232 ttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||| ||| |||||||||  |||||||||||||||||||||| ||||| |||||||||||||||| |||||    
T  25248850 tttttctagaaatatagactttgtatcagagtaaaccttgagatagagggggctgaaacaagggtttagaa 25248780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 205 - 302
Target Start/End: Original strand, 16226085 - 16226182
Alignment:
Q  205 agatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||| | || ||||||||| | |||||||||||||||||||| ||||||||| || |||| ||||| ||||| || || |||||||||| |||||    
T  16226085 agatttgttacagattttaagcaagacttttactataaatatagaccttgtatcaaagcaaactttgagatagaggggtctaaaacaagggtttagaa 16226182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 231 - 296
Target Start/End: Original strand, 17324009 - 17324074
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggt 296  Q
    |||||| ||||||||||||  |||||| ||||||||||||||| ||||||||||| ||||||||||    
T  17324009 cttttattataaatatagactttgtattagagtaaaccttgagatagagagggctaaaacaagggt 17324074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 47179402 - 47179451
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcagg 50  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  47179402 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagg 47179451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 222 - 302
Target Start/End: Original strand, 16428588 - 16428668
Alignment:
Q  222 taagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||| |||||||||||||||||||||| | || |||||||| ||||| | || ||||| |||||||||||||||| |||||    
T  16428588 taagggatacttttactataaatataggttttatatcagagcaaaccattagatagagggggctgaaacaagggtttagaa 16428668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 43104099 - 43104143
Alignment:
Q  227 gatacttttactataaatatagatcttgtatcagagtaaaccttg 271  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  43104099 gatacttttactataaatatagaccttgtatcagagtaaaccttg 43104143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 302
Target Start/End: Original strand, 2617460 - 2617531
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||| |||||||||||||| |||||||||||| |||| ||||| |||||  ||||||||||||||| |||||    
T  2617460 ctttcactataaatatagaccttgtatcagagcaaactttgagatagaggaggctgaaacaagggtttagaa 2617531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 302
Target Start/End: Original strand, 31489859 - 31489930
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||  |||||| || |||||||||||| ||||| ||| |||||||||||| |||||    
T  31489859 cttttactataaatatagacattgtattagtgtaaaccttgagatagagggggttgaaacaagggtttagaa 31489930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 228 - 302
Target Start/End: Complemental strand, 6996040 - 6995966
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||| |||||||||||| |||| ||||||||||| |||||| ||||| |||| ||||||| ||| |||||    
T  6996040 atacttttattataaatatagaccttgaatcagagtaaatcttgagatagagggggccgaaacaacggtttagaa 6995966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 229 - 302
Target Start/End: Complemental strand, 8347608 - 8347535
Alignment:
Q  229 tacttttactataaatatagatcttgtatcaga-gtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||||||||| ||||| ||||||||||| |||||||||||| ||||| ||| |||||||||||| |||||    
T  8347608 tacttttactataaa-atagaccttgtatcagatgtaaaccttgagatagagggggttgaaacaagggtttagaa 8347535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 220 - 302
Target Start/End: Original strand, 20291390 - 20291472
Alignment:
Q  220 tttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||| |||||||||||||||||||| ||||||| |||| |||  ||||| ||||| | | |||||||||||| |||||    
T  20291390 tttaagcgaaacttttactataaatatagaccttgtattagagcaaattttgagatagagggagatgaaacaagggtttagaa 20291472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 302
Target Start/End: Complemental strand, 12302849 - 12302771
Alignment:
Q  229 tacttttactataaatatagatcttgtatcaga-gtaaaccttgagc----tagagagggctgaaacaagggtatagaa 302  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||     ||||| |||||||||||||||| |||||    
T  12302849 tacttttactataaatatagaccttgtatcagatgtaaaccttgagagagatagagggggctgaaacaagggtttagaa 12302771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 16228210 - 16228259
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcagg 50  Q
    |||||| ||||||| |||||||||||||| ||||||||||||||||||||    
T  16228210 actgatttgaagtcaaggtggagaattgtaagagttaacttaaaatcagg 16228259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 50248909 - 50248848
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaa 292  Q
    |||||||||||||||||||  ||||||||| |||||||||||| ||||| | ||||||||||    
T  50248909 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggagctgaaacaa 50248848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 16431041 - 16431093
Alignment:
Q  227 gatacttttactataaatatagatcttgtatcagagtaaaccttgagctagag 279  Q
    |||||||||||||||||||||| | ||||||||||| |||||||||| |||||    
T  16431041 gatacttttactataaatataggttttgtatcagagcaaaccttgagatagag 16431093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 228 - 304
Target Start/End: Complemental strand, 17324976 - 17324900
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatg 304  Q
    |||||||||||||||||||||| |||| | ||||||||||||  || || || ||||| |||||||||| |||||||    
T  17324976 atacttttactataaatatagaccttgaaccagagtaaacctgaagatacagggggctaaaacaagggtttagaatg 17324900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 187 - 294
Target Start/End: Complemental strand, 9241467 - 9241359
Alignment:
Q  187 aaacgtatttttgggtccagatttgcttcaaattttaagcga--tacttttactataaatatagatcttgtatcagagtaaaccttgagctaga-gaggg 283  Q
    ||||||||||||||||| ||||||| ||| ||||||| | |   ||||||||||||||||||||   ||||||||||||||||||| || |||| | |||    
T  9241467 aaacgtatttttgggtc-agatttg-ttccaattttatgggggttacttttactataaatataggctttgtatcagagtaaaccttaagatagagggggg 9241370  T
Q  284 ctgaaacaagg 294  Q
    |||||||||||    
T  9241369 ctgaaacaagg 9241359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 48665112 - 48665163
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagag 279  Q
    |||||||||||||||||||||| |||| ||||||||||||||| || |||||    
T  48665112 atacttttactataaatatagaccttgaatcagagtaaaccttaagatagag 48665163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 301
Target Start/End: Original strand, 18839531 - 18839601
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtataga 301  Q
    |||||||||||||||||||  |||||| |  ||||||| |||| ||||| |||||||||||||||| ||||    
T  18839531 cttttactataaatatagacattgtattattgtaaaccatgagatagagggggctgaaacaagggtttaga 18839601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 273
Target Start/End: Original strand, 24325597 - 24325642
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgag 273  Q
    |||||||||||||||||||||| |||||||||||| |||| |||||    
T  24325597 atacttttactataaatatagaccttgtatcagagcaaactttgag 24325642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 9521367 - 9521442
Alignment:
Q  27 tgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag 102  Q
    |||||||||||||||||||||||  |||||  | |||||||||||||||||||| || || |||||||| |||||||    
T  9521367 tgtgagagttaacttaaaatcagaaatctg-gagaatcgtgccacgatggagaagcatcgcgccacgattgttgaag 9521442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 145
Target Start/End: Complemental strand, 21353857 - 21353739
Alignment:
Q  27 tgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag-aattttgtgaggcaagtcactg 124  Q
    |||| ||||||||||||||||||  |||||  | |||||||||||||||||||| || || |||||||| ||||||| ||  || ||||| |||  ||||    
T  21353857 tgtgggagttaacttaaaatcagaaatctg-gagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctgagg-aagctactg 21353760  T
Q  125 gaaatttcgtgccacgatggg 145  Q
    ||| |||||||||||||||||    
T  21353759 gaattttcgtgccacgatggg 21353739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 28201958 - 28201926
Alignment:
Q  16 aggtggagaattgtgagagttaacttaaaatca 48  Q
    |||||||||||||||||||||||||||||||||    
T  28201958 aggtggagaattgtgagagttaacttaaaatca 28201926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 46782864 - 46782908
Alignment:
Q  30 gagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatg 74  Q
    ||||||||||||| ||||| |||||| ||||||||||||||||||    
T  46782864 gagagttaacttataatcaagatctgaaaaaatcgtgccacgatg 46782908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 302
Target Start/End: Original strand, 47177276 - 47177377
Alignment:
Q  205 agatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagc----tagagagggctgaaacaagggtatag 300  Q
    ||||||| | || |||||||||   |||||||||||||||||||| ||||||||| || |||| |||||     ||||| |||||||||||||||| |||    
T  47177276 agatttgttacagattttaagcaggacttttactataaatatagaccttgtatcaaagcaaactttgagagagatagagggggctgaaacaagggtttag 47177375  T
Q  301 aa 302  Q
    ||    
T  47177376 aa 47177377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 302
Target Start/End: Original strand, 47179627 - 47179728
Alignment:
Q  205 agatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagc----tagagagggctgaaacaagggtatag 300  Q
    ||||||| | || |||||||||   |||||||||||||||||||| ||||||||| || |||| |||||     ||||| |||||||||||||||| |||    
T  47179627 agatttgttacagattttaagcaggacttttactataaatatagaccttgtatcaaagcaaactttgagagagatagagggggctgaaacaagggtttag 47179726  T
Q  301 aa 302  Q
    ||    
T  47179727 aa 47179728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 271
Target Start/End: Original strand, 155618 - 155685
Alignment:
Q  205 agatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcaga-gtaaaccttg 271  Q
    ||||||| ||||| |||| || ||| |||||||||||||| || ||||||||||||| ||||||||||    
T  155618 agatttgtttcaatttttgagggatccttttactataaatgtaaatcttgtatcagatgtaaaccttg 155685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 296
Target Start/End: Complemental strand, 2510668 - 2510596
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagc----tagagagggctgaaacaagggt 296  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||     ||||| ||||||||||||||||    
T  2510668 atacttttactataaatatagaccttgtatcaggctaaactttgagagagatagagggggctgaaacaagggt 2510596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 304
Target Start/End: Original strand, 47906205 - 47906287
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaacctt------gagctagagagggctgaaacaagggtatagaatg 304  Q
    |||||||||||||||||||||| ||||||||||  ||||| ||      ||| ||||| |||||||||||||||| |||||||    
T  47906205 atacttttactataaatatagaccttgtatcaggctaaactttgagagagagatagagggggctgaaacaagggtttagaatg 47906287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 102
Target Start/End: Original strand, 2617278 - 2617355
Alignment:
Q  25 attgtgagagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag 102  Q
    ||||||||||||||||||||||||| | ||||  | ||||||||||||||||||||    ||||||||||| |||||||    
T  2617278 attgtgagagttaacttaaaatcagaattctg-gagaatcgtgccacgatggagaagtttcgtgccacgattgttgaag 2617355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 295
Target Start/End: Original strand, 6756469 - 6756535
Alignment:
Q  229 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaaggg 295  Q
    ||||||| |||||||||||||  ||||||| | |||||||||||  ||||| || ||||||||||||    
T  6756469 tacttttgctataaatatagacattgtatcggtgtaaaccttgaaatagaggggactgaaacaaggg 6756535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 237 - 279
Target Start/End: Complemental strand, 26520449 - 26520407
Alignment:
Q  237 ctataaatatagatcttgtatcagagtaaaccttgagctagag 279  Q
    |||||||||||||  |||||||||||||||||||||| |||||    
T  26520449 ctataaatatagactttgtatcagagtaaaccttgagatagag 26520407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 41646681 - 41646727
Alignment:
Q  27 tgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgat 73  Q
    |||||||||||||||||||||| | |||||| |||||||| ||||||    
T  41646681 tgtgagagttaacttaaaatcatgttctgcagaaatcgtggcacgat 41646727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 9459763 - 9459718
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgag 273  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||    
T  9459763 atacttttactataaatatagaccttgtatcaggctaaactttgag 9459718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 9463590 - 9463545
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgag 273  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||    
T  9463590 atacttttactataaatatagaccttgtatcaggctaaactttgag 9463545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 174
Target Start/End: Original strand, 16225973 - 16226034
Alignment:
Q  113 ggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggc 174  Q
    |||||| |||||||||  ||||| |||||||||||| ||  |||||||||||||||| ||||    
T  16225973 ggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 16226034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 302
Target Start/End: Complemental strand, 26613603 - 26613503
Alignment:
Q  205 agatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaacctt--gagctagagagggctg-aaacaagggtataga 301  Q
    ||||||| | ||| |||| || ||| ||||| ||||||||||||| |||||||||||  |||||||  ||| ||||| |||||| |||||||||| ||||    
T  26613603 agatttgttccaatttttgagggattcttttgctataaatatagaccttgtatcagatgaaaccttgagagatagagggggctgaaaacaagggtttaga 26613504  T
Q  302 a 302  Q
    |    
T  26613503 a 26613503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 28207581 - 28207540
Alignment:
Q  32 gagttaacttaaaatcaggatctgcaaaaatcgtgccacgat 73  Q
    ||||||||||||||||||| |||||| |||||||| ||||||    
T  28207581 gagttaacttaaaatcaggttctgcagaaatcgtggcacgat 28207540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 302
Target Start/End: Complemental strand, 31735865 - 31735787
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaacct----tgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||||| ||||||||||  ||||| |    |||| ||||| ||||| |||||||||| |||||    
T  31735865 atacttttactataaatatagaccttgtatcaggctaaactttgaatgagatagagggggctaaaacaagggtttagaa 31735787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 46432068 - 46432023
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgag 273  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||    
T  46432068 atacttttactataaatatagaccttgtatcaggctaaactttgag 46432023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 174
Target Start/End: Original strand, 47177163 - 47177224
Alignment:
Q  113 ggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggc 174  Q
    |||||| |||||||||  ||||| |||||||||||| ||  |||||||||||||||| ||||    
T  47177163 ggcaagacactggaaaaatcgtggcacgatggggtctcatcgtggcacgatggtgcgctggc 47177224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 15295183 - 15295143
Alignment:
Q  233 tttactataaatatagatcttgtatcagagtaaaccttgag 273  Q
    ||||||||||||||||| |||||||||||| |||| |||||    
T  15295183 tttactataaatatagaccttgtatcagagcaaactttgag 15295143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 233 - 302
Target Start/End: Complemental strand, 21948526 - 21948453
Alignment:
Q  233 tttactataaatatagatcttgtatcagagtaaaccttgagc----tagagagggctgaaacaagggtatagaa 302  Q
    ||||||||||||||||| ||||||||| | ||||| |||||     ||||| |||||||||||||||| |||||    
T  21948526 tttactataaatatagaccttgtatcatactaaactttgagagagatagagggggctgaaacaagggtttagaa 21948453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 233 - 302
Target Start/End: Original strand, 39932017 - 39932088
Alignment:
Q  233 tttactataaatatagatcttgtatcagagtaaacctt--gagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||||||||||| ||||||| |||  |||| ||  ||| ||||| |||||||||||||||| |||||    
T  39932017 tttactataaatatagaccttgtatgagacaaaactttgagagatagagggggctgaaacaagggtttagaa 39932088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 117; Significance: 2e-59; HSPs: 82)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 110 - 302
Target Start/End: Complemental strand, 27306685 - 27306493
Alignment:
Q  110 tgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatt 209  Q
    |||||||||||| ||||||  ||||| |||||||||||| |   |||||||||||||||| | ||||||||||||| |||||||||||||||| ||||||    
T  27306685 tgaggcaagtcattggaaaaatcgtggcacgatggggtcgcttcgtggcacgatggtgcgctagcagcgaataacagaaacgtatttttgggtgcagatt 27306586  T
Q  210 tgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    || | ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| |||||||||||||||| |||||    
T  27306585 tgttccaaattttaagcgatacttttactataaatatagaccttgtatcagagtaaactttgagatagagggggctgaaacaagggtttagaa 27306493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 110 - 302
Target Start/End: Original strand, 18567446 - 18567638
Alignment:
Q  110 tgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttg-ggtccagat 208  Q
    |||||||||||||||||  ||||||| ||||||||||||||||  ||||||||||||||| ||||| ||||||||| ||||||||||||  ||| || ||    
T  18567446 tgaggcaagtcactggatttttcgtggcacgatggggtcacaacttggcacgatggtgcgctggcaacgaataacagaaacgtatttttttggtgcaaat 18567545  T
Q  209 ttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    | | | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||  |||||||||||||||| |||||    
T  18567546 t-gttccaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaactttgagatagaaggggctgaaacaagggtttagaa 18567638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 110 - 302
Target Start/End: Complemental strand, 31435503 - 31435311
Alignment:
Q  110 tgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttg-ggtccagat 208  Q
    |||||||||||||||||  ||||||| ||||||||||||||||  ||||||||||||||| ||||| ||||||||| ||||||||||||  ||| || ||    
T  31435503 tgaggcaagtcactggatttttcgtggcacgatggggtcacaacttggcacgatggtgcgctggcaacgaataacagaaacgtatttttttggtgcaaat 31435404  T
Q  209 ttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    | | | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||  |||||||||||||||| |||||    
T  31435403 t-gttccaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaactttgagatagaaggggctgaaacaagggtttagaa 31435311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 120 - 302
Target Start/End: Original strand, 44407 - 44589
Alignment:
Q  120 cactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaat 219  Q
    |||||||||  || || |||||||||||| ||  |||||||||||||||| ||||||| |||||||||||| ||||||||||| ||||||||   |||||    
T  44407 cactggaaaaatcatggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcaaataacataaacatatttttgggtgcagatttgtaccaaat 44506  T
Q  220 tttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||| ||||| ||||| |||||||||||||||| |||||    
T  44507 tttaagcgatacttttactataaatatagaccttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaa 44589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 110 - 296
Target Start/End: Original strand, 35462 - 35648
Alignment:
Q  110 tgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatt 209  Q
    ||||||||  |||||||||  ||||| |||||||||||| ||  ||||| |||| ||||| ||||||| |||| || |||||||||||||||| ||||||    
T  35462 tgaggcaaagcactggaaaaatcgtggcacgatggggtcgcatcgtggcccgatcgtgcgctggcagcaaatagcagaaacgtatttttgggtgcagatt 35561  T
Q  210 tgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggt 296  Q
    || | ||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||| ||||| ||||||||||||||||    
T  35562 tgttccaaattttaagcgatacttttactataaatatagaccttgtatcagagcaaactttgagatagagggggctgaaacaagggt 35648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 154 - 302
Target Start/End: Complemental strand, 1049707 - 1049559
Alignment:
Q  154 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatctt 253  Q
    ||||||||| |||||| |||| |||||||||| |||||||||||||||| |||||||| | |||||||||||||| |||||||||||||||||||| |||    
T  1049707 gtggcacgaaggtgcgctggcggcgaataacagaaacgtatttttgggtgcagatttgttccaaattttaagcgaaacttttactataaatatagacctt 1049608  T
Q  254 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||| |||| |||| ||||| ||||| |||||||||||||||| |||||    
T  1049607 gtattagagcaaactttgagatagagggggctgaaacaagggtttagaa 1049559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 110 - 302
Target Start/End: Original strand, 3878405 - 3878602
Alignment:
Q  110 tgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatt 209  Q
    ||||||||  |||||||||  ||||| |||||||||||| ||  ||||||||||||| || ||||||||||||||| ||||||| |||||||| ||||||    
T  3878405 tgaggcaaagcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtacgctggcagcgaataacagaaacgta-ttttgggtgcagatt 3878503  T
Q  210 tgcttcaaattttaagcgatacttttactata----aatatagatcttgtatcagagtaaacctt--gagctagagagggctgaaacaagggtatagaa 302  Q
    || | |||||||||||||||||||||||||||    |||||||| |||||||||||| |||| ||  ||| ||||| |||||||||||||||| |||||    
T  3878504 tgttccaaattttaagcgatacttttactataaattaatatagaccttgtatcagagcaaactttgagagatagagggggctgaaacaagggtttagaa 3878602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 131 - 296
Target Start/End: Original strand, 22392327 - 22392492
Alignment:
Q  131 tcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgata 230  Q
    ||||||||||||||| || ||| |||| ||||||||||| |||  || || |||| ||| ||||||||  || |||||||| | |||||| |||||||||    
T  22392327 tcgtgccacgatgggatcgcaacgtggtacgatggtgcgctggaggcaaaaaacagaaatgtatttttcagtgcagatttgttccaaattgtaagcgata 22392426  T
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggt 296  Q
    ||||||||||||||||||| ||||||||||||||||| ||||| ||||| ||||||||||||||||    
T  22392427 cttttactataaatatagaccttgtatcagagtaaactttgagatagagggggctgaaacaagggt 22392492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 154 - 302
Target Start/End: Original strand, 26804451 - 26804594
Alignment:
Q  154 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatctt 253  Q
    |||||||||||||||| ||||||| ||||||| ||||||||||| |||| |||||||| | ||||||||||||||||||||||||||||||||||| |||    
T  26804451 gtggcacgatggtgcgctggcagcaaataacagaaacgtatttt-gggtgcagatttgttccaaattttaagcgatacttttactataaatatagacctt 26804549  T
Q  254 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||    |||||||| ||||| ||||| |||||||||||||||| |||||    
T  26804550 gt----gagtaaactttgagatagagggggctgaaacaagggtttagaa 26804594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 112 - 302
Target Start/End: Original strand, 25542365 - 25542555
Alignment:
Q  112 aggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgg-gtccagattt 210  Q
    ||||||| |||| ||||  ||||| ||||||||| || ||  |||||||||||||||| |||||||||| |||| |||| ||||||| | ||  ||||||    
T  25542365 aggcaaggcacttgaaaaatcgtggcacgatgggatcgcatcgtggcacgatggtgcgctggcagcgaaaaacagaaacatattttttgagtgtagattt 25542464  T
Q  211 gcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
      | |||||||||||||| |||||||||||||||||||| |||||||||||| |||| ||||| ||||| |||||||||||| ||| |||||    
T  25542465 attccaaattttaagcgaaacttttactataaatatagaccttgtatcagagcaaactttgagatagag-gggctgaaacaaaggtttagaa 25542555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 180 - 302
Target Start/End: Original strand, 7188445 - 7188568
Alignment:
Q  180 ataacataaacgtatttttgggtccagatttgcttcaaatttta--agcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctag 277  Q
    ||||||||||||||||||||||   ||||||| ||| |||||||  || |||||||||||||||||||||||  |||||||||||||||||||||| |||    
T  7188445 ataacataaacgtatttttgggctgagatttg-ttccaattttatgagggatacttttactataaatatagactttgtatcagagtaaaccttgagatag 7188543  T
Q  278 agagggctgaaacaagggtatagaa 302  Q
    || |||||||||||||||| |||||    
T  7188544 agggggctgaaacaagggtttagaa 7188568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 7074414 - 7074556
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg 99  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||  |||||  |  ||||||||||||||||||| || ||||||||||||||||    
T  7074414 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctg-gagtatcgtgccacgatggagaagcatcgtgccacgatggttg 7074512  T
Q  100 aagaattttgtgaggcaagtcactggaaatttcgtgccacgatg 143  Q
    ||| |   |    || ||| ||||||||||||||||||||||||    
T  7074513 aagcaagattcctgggaagacactggaaatttcgtgccacgatg 7074556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 154 - 302
Target Start/End: Complemental strand, 40837155 - 40837006
Alignment:
Q  154 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgg-gtccagatttgcttcaaattttaagcgatacttttactataaatatagatct 252  Q
    |||||||||||||| | |||||||||| || | |||| ||||||| | || |||||||| | ||||||||||| || |||||||||||||||||||| ||    
T  40837155 gtggcacgatggtgtgctggcagcgaaaaatagaaacatattttttgagtgcagatttgttccaaattttaagggaaacttttactataaatatagacct 40837056  T
Q  253 tgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||| |||  | ||| | ||| ||||||||| |||||| |||||    
T  40837055 tgtatcagagcaaatttggagattgagggggctgaaagaagggtttagaa 40837006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 25405020 - 25405121
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg 99  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||  |||||  |  ||||||||||||||||||| || || |||||||||||||    
T  25405020 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctg-gagtatcgtgccacgatggagaagcatcgcgccacgatggttg 25405118  T
Q  100 aag 102  Q
    |||    
T  25405119 aag 25405121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 30246616 - 30246759
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg 99  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||  |||||  | |||||||||||||||||||| ||  | |||||||| ||||    
T  30246616 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctg-gagaatcgtgccacgatggagaagcattgcgccacgattgttg 30246714  T
Q  100 aag-aattttgtgaggcaagtcactggaaatttcgtgccacgatgg 144  Q
    ||| ||  || ||||| |||  | ||||||||||||||||||||||    
T  30246715 aagcaagattctgagg-aagctattggaaatttcgtgccacgatgg 30246759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 228 - 305
Target Start/End: Complemental strand, 42331337 - 42331260
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatga 305  Q
    ||||||||||||||||||||||  |||||||||| ||||| ||||| ||||| |||||||||||||||| ||||||||    
T  42331337 atacttttactataaatatagactttgtatcagactaaactttgagatagagggggctgaaacaagggtttagaatga 42331260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 228 - 304
Target Start/End: Complemental strand, 13099814 - 13099738
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatg 304  Q
    |||||||||||||||||||||| |||| |||| ||||||||||||| ||||| ||| |||||||||||| |||||||    
T  13099814 atacttttactataaatatagaccttgaatcaaagtaaaccttgagatagagggggttgaaacaagggtttagaatg 13099738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 214 - 302
Target Start/End: Complemental strand, 22251894 - 22251806
Alignment:
Q  214 tcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||||||||| |||||||||||||||||| | |||| |||||||||||| ||||| |||||  |||||||||||| || |||||    
T  22251894 tcaaattttaagcgacacttttactataaatataaaccttgaatcagagtaaactttgagatagaggaggctgaaacaagagtttagaa 22251806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 231 - 302
Target Start/End: Original strand, 21678020 - 21678091
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||| ||||||||  |||||||||||| ||||| |||||||||||||||| |||||    
T  21678020 cttttactataaatatagatattgtatcaatgtaaaccttgagatagagggggctgaaacaagggtttagaa 21678091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 44290 - 44360
Alignment:
Q  3 tgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgat 73  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||  ||||||| ||||||    
T  44290 tgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgat 44360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 7465035 - 7464912
Alignment:
Q  21 gagaattgtgagagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag-aattttgtgaggcaag 118  Q
    ||||||||||||||||||||||||||||| | ||||  | |||||||||||||||||||| || || |||||||| ||||||| ||  || ||||| |||    
T  7465035 gagaattgtgagagttaacttaaaatcagaattctg-gagaatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctgagg-aag 7464938  T
Q  119 tcactggaaatttcgtgccacgatgg 144  Q
      ||||||||||||||||||||||||    
T  7464937 ctactggaaatttcgtgccacgatgg 7464912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 232 - 305
Target Start/End: Original strand, 21990106 - 21990178
Alignment:
Q  232 ttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatga 305  Q
    |||||||||||||||||| |||| |||||||||||||| ||| ||||| |||||||||||||||| ||||||||    
T  21990106 ttttactataaatatagaccttgaatcagagtaaacctggagatagag-gggctgaaacaagggtttagaatga 21990178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 3320606 - 3320463
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgag-agttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggtt 98  Q
    |||||| ||||||| ||||||||||||||||| |||||||||||||||||  |||||  |  ||||||||||||||||||| || || ||||||||||||    
T  3320606 actgatttgaagtcaaggtggagaattgtgagaagttaacttaaaatcagaaatctg-gagcatcgtgccacgatggagaagcatcgcgccacgatggtt 3320508  T
Q  99 gaagaattttgtgaggcaagtcactggaaatttcgtgccacgatg 143  Q
    |||| |   |    || ||| ||||||||||||||||||||||||    
T  3320507 gaagcaagattcctgggaagccactggaaatttcgtgccacgatg 3320463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 187 - 302
Target Start/End: Original strand, 11355168 - 11355283
Alignment:
Q  187 aaacgtatttttgggtccagatttgcttcaaattt-taagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggct 285  Q
    ||||||||||||||| || |||||  ||| ||||| | || ||| ||||||||||||||||||   ||||||||| |||||||||||| ||||| |||||    
T  11355168 aaacgtatttttggg-cctgattttgttccaatttatgagggattcttttactataaatataggctttgtatcagtgtaaaccttgagatagagggggct 11355266  T
Q  286 gaaacaagggtatagaa 302  Q
    ||||||||||| |||||    
T  11355267 gaaacaagggtttagaa 11355283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 187 - 302
Target Start/End: Complemental strand, 20137488 - 20137373
Alignment:
Q  187 aaacgtatttttgggtccagatttgcttcaaattt-taagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggct 285  Q
    ||||||||||||||| || |||||  ||| ||||| | || ||| |||||||||||||||| |   |||||||||||||||||||||| ||||| |||||    
T  20137488 aaacgtatttttggg-cctgattttgttccaatttatgagggattcttttactataaatattggctttgtatcagagtaaaccttgagatagagggggct 20137390  T
Q  286 gaaacaagggtatagaa 302  Q
    ||||||||||| |||||    
T  20137389 gaaacaagggtttagaa 20137373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 232 - 304
Target Start/End: Complemental strand, 37412462 - 37412390
Alignment:
Q  232 ttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatg 304  Q
    |||||||||||||||||| |||| |||||||||||||| ||| || || |||||||||||||||| |||||||    
T  37412462 ttttactataaatatagaccttgaatcagagtaaacctggagatatagggggctgaaacaagggtttagaatg 37412390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 231 - 305
Target Start/End: Complemental strand, 4296271 - 4296196
Alignment:
Q  231 cttttactataaatatagatctt-gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatga 305  Q
    |||||||||||||||||||  || ||||||| |||||||||||| ||||| |||||||||||||||| ||||||||    
T  4296271 cttttactataaatatagacatttgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaatga 4296196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 231 - 302
Target Start/End: Original strand, 21679981 - 21680052
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||  |||||| || |||||||||||| ||||| |||||||||||||||| |||||    
T  21679981 cttttactataaatatagacattgtattagtgtaaaccttgagatagagggggctgaaacaagggtttagaa 21680052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 227 - 302
Target Start/End: Complemental strand, 22828972 - 22828897
Alignment:
Q  227 gatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||||||||||||||||   ||||||| |||||||||||||| ||||| ||||||||||||| || |||||    
T  22828972 gatacttttactataaatataggctttgtatccgagtaaaccttgagatagagggggctgaaacaagagtttagaa 22828897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 44144438 - 44144364
Alignment:
Q  27 tgtgagagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaa 101  Q
    ||||||||||||||||||||||||| |||  | ||| |||||||||||||||||||||||||||||||| ||||||    
T  44144438 tgtgagagttaacttaaaatcaggaatctagagaaa-cgtgccacgatggagaaacaacgtgccacgattgttgaa 44144364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 227 - 289
Target Start/End: Complemental strand, 20091880 - 20091818
Alignment:
Q  227 gatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaa 289  Q
    |||||||||||||||||||||||  || ||||||||||||||||||| ||||| |||||||||    
T  20091880 gatacttttactataaatatagactttttatcagagtaaaccttgagatagagggggctgaaa 20091818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 228 - 302
Target Start/End: Complemental strand, 31156249 - 31156175
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||||| |||||||||  | |||| ||||| ||||| |||||||||||||||| |||||    
T  31156249 atacttttactataaatatagagcttgtatcaaggcaaactttgagatagagggggctgaaacaagggtttagaa 31156175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 1047529 - 1047480
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcagg 50  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  1047529 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagg 1047480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 22136852 - 22136901
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcagg 50  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  22136852 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagg 22136901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 237 - 302
Target Start/End: Original strand, 24258423 - 24258488
Alignment:
Q  237 ctataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||| | |||||||||||||||| ||||| ||||| |||||||||||||||| |||||    
T  24258423 ctataaatataggttttgtatcagagtaaacattgagatagagggggctgaaacaagggtttagaa 24258488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 40551879 - 40551928
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcagg 50  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  40551879 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagg 40551928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 247
Target Start/End: Original strand, 42006316 - 42006535
Alignment:
Q  27 tgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg-aagaattttgtgaggcaagtcactgg 125  Q
    |||||||||||||||||||||||| | || | |||||||  |||| |||||||  |||||||||||||  ||| || ||  |  ||| |||||||||||     
T  42006316 tgtgagagttaacttaaaatcaggttttggagaaatcgtctcacgttggagaagtaacgtgccacgattattgaaacaagatcctgaagcaagtcactga 42006415  T
Q  126 aaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaag 225  Q
    |||  ||||| ||||||||  ||  || ||||||||||||| |||| | ||  ||||||||||||||| ||||  ||  ||||||| | || ||||||||    
T  42006416 aaaaatcgtggcacgatggaatcgtaacgtggcacgatggtacgtt-gaaggaaataacataaacgta-ttttcagtgaagatttgttccatattttaag 42006513  T
Q  226 cgatacttttactataaatata 247  Q
     | |||||||||||||||||||    
T  42006514 ggttacttttactataaatata 42006535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 228 - 304
Target Start/End: Original strand, 443546 - 443622
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatg 304  Q
    ||||||||||||||||||||||  ||| |||||||||||||||||| ||||| | ||| |||||| ||| |||||||    
T  443546 atacttttactataaatatagactttgaatcagagtaaaccttgagatagagggagctaaaacaatggtttagaatg 443622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 232 - 296
Target Start/End: Original strand, 3677235 - 3677298
Alignment:
Q  232 ttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggt 296  Q
    ||||||||||||||||||||||| |||||||||||| | ||| ||||| ||||||||||||||||    
T  3677235 ttttactataaatatagatcttgaatcagagtaaacttggagatagag-gggctgaaacaagggt 3677298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 302
Target Start/End: Original strand, 24465503 - 24465574
Alignment:
Q  232 ttttactataaatatagatcttgtatcaga-gtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||| |||||||  |||||||||| |||||||||||| ||||| |||||||||||||||| |||||    
T  24465503 ttttactatagatatagactttgtatcagatgtaaaccttgagatagagggggctgaaacaagggtttagaa 24465574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 25409777 - 25409875
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg 99  Q
    |||||| ||||||| |||||||||||||| | |||||||||||||||||  |||||  | |||||||||||||||||||| || || |||||||| ||||    
T  25409777 actgatttgaagtcaaggtggagaattgtaaaagttaacttaaaatcagaaatctg-gagaatcgtgccacgatggagaagcatcgcgccacgattgttg 25409875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 302
Target Start/End: Original strand, 44724533 - 44724604
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||  ||||||||| |||||||| ||| || || |||||||||||||||| |||||    
T  44724533 cttttactataaatatagacattgtatcagtgtaaacctggagatatagggggctgaaacaagggtttagaa 44724604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 233 - 302
Target Start/End: Complemental strand, 24817682 - 24817613
Alignment:
Q  233 tttactataaatatagatcttgtatcaga-gtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||| |||||||||||| ||||||||||| |||||||||||| ||||| |||||||||||||||| |||||    
T  24817682 tttaatataaatatagaccttgtatcagatgtaaaccttgagatagag-gggctgaaacaagggtttagaa 24817613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 227 - 289
Target Start/End: Complemental strand, 30906389 - 30906327
Alignment:
Q  227 gatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaa 289  Q
    ||||||||| ||||||||||||| ||||||| |||||||| |||||| ||||| |||||||||    
T  30906389 gatacttttgctataaatatagaccttgtataagagtaaatcttgagatagagggggctgaaa 30906327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 231 - 301
Target Start/End: Complemental strand, 39146322 - 39146252
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtataga 301  Q
    |||||||||||||||||||   |||||||| |||||||||||| | ||| |||||||||||||||| ||||    
T  39146322 cttttactataaatatagacactgtatcagtgtaaaccttgagatggagggggctgaaacaagggtttaga 39146252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 231 - 304
Target Start/End: Original strand, 42223110 - 42223184
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctaga-gagggctgaaacaagggtatagaatg 304  Q
    ||||||||||||||||||   |||||||||||||||||||||| |||| | ||| |||||||||||| |||||||    
T  42223110 cttttactataaatataggctttgtatcagagtaaaccttgagatagatgtgggatgaaacaagggtttagaatg 42223184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 177 - 257
Target Start/End: Original strand, 45366446 - 45366526
Alignment:
Q  177 cgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtat 257  Q
    |||| |||| ||||||||||||  || |||||||| | ||||||||||| | ||||||||||||||||||| | |||||||    
T  45366446 cgaaaaacagaaacgtatttttcagtgcagatttgttccaaattttaagggttacttttactataaatataaaccttgtat 45366526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 231 - 302
Target Start/End: Original strand, 24748548 - 24748619
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||| ||||||||||||  ||||||||| |||||| ||||  ||||| |||||||||||||||| |||||    
T  24748548 cttttattataaatatagacattgtatcagtgtaaactttgacttagagggggctgaaacaagggtttagaa 24748619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 296
Target Start/End: Original strand, 6332176 - 6332245
Alignment:
Q  227 gatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggct-gaaacaagggt 296  Q
    ||||||||||||||||||||| | ||||||||||||| |||||||||  |||| ||||| |||||||||||    
T  6332176 gatacttttactataaatataaaacttgtatcagagt-aaccttgagagagagggggctggaaacaagggt 6332245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 302
Target Start/End: Original strand, 3035668 - 3035746
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagc----tagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||     ||||| |||||||||||||||| |||||    
T  3035668 atacttttactataaatatagaccttgtatcaggctaaactttgagagagatagagggggctgaaacaagggtttagaa 3035746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 143
Target Start/End: Original strand, 7069433 - 7069549
Alignment:
Q  27 tgtgagagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaagaattttgtgaggcaagtcactgg 125  Q
    ||||||||||||||||||||||| | |||| |  | |||||||||||||||||| || || |||||||||||||||| |   |    || ||| ||||||    
T  7069433 tgtgagagttaacttaaaatcagaaatctggagta-tcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactgg 7069531  T
Q  126 aaatttcgtgccacgatg 143  Q
    ||||||||||||||||||    
T  7069532 aaatttcgtgccacgatg 7069549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 232 - 305
Target Start/End: Original strand, 9679009 - 9679087
Alignment:
Q  232 ttttactataaatatagatcttgtatcaga-gtaaaccttgagc----tagagagggctgaaacaagggtatagaatga 305  Q
    |||||||||||||||||||||||||||||| |||||| |||||     ||||| |||||||||||||| | ||||||||    
T  9679009 ttttactataaatatagatcttgtatcagatgtaaactttgagagagatagagggggctgaaacaaggatctagaatga 9679087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 302
Target Start/End: Original strand, 38393933 - 38394011
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagc----tagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||     ||||| |||||||||||||||| |||||    
T  38393933 atacttttactataaatatagaccttgtatcaggctaaactttgagagagatagagggggctgaaacaagggtttagaa 38394011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 35377 - 35425
Alignment:
Q  25 attgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgat 73  Q
    |||||||||||||||||||||||| ||||||||  ||||||| ||||||    
T  35377 attgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgat 35425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 1606421 - 1606473
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagaga 280  Q
    |||||||||||||||||||||| ||||||||| || |||| ||||| ||||||    
T  1606421 atacttttactataaatatagaccttgtatcaaagcaaactttgagatagaga 1606473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 302
Target Start/End: Complemental strand, 7470359 - 7470286
Alignment:
Q  233 tttactataaatatagatcttgtatcagagtaaaccttgagc----tagagagggctgaaacaagggtatagaa 302  Q
    ||||||||||||||||| ||||||||||| ||||| |||||     ||||| |||||||||||||||| |||||    
T  7470359 tttactataaatatagaccttgtatcagactaaactttgagagagatagagggggctgaaacaagggtttagaa 7470286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 302
Target Start/End: Complemental strand, 7472317 - 7472244
Alignment:
Q  233 tttactataaatatagatcttgtatcagagtaaaccttgagc----tagagagggctgaaacaagggtatagaa 302  Q
    ||||||||||||||||| ||||||||||| ||||| |||||     ||||| |||||||||||||||| |||||    
T  7472317 tttactataaatatagaccttgtatcagactaaactttgagagagatagagggggctgaaacaagggtttagaa 7472244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 182 - 261
Target Start/End: Complemental strand, 6067576 - 6067497
Alignment:
Q  182 aacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcaga 261  Q
    ||||||||| |||||||||| |  |||||| | ||| |||| || ||| ||||||||||||||||| ||| |||||||||    
T  6067576 aacataaacatatttttgggcctggatttgttccaattttttagggatgcttttactataaatataaatcctgtatcaga 6067497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 7092512 - 7092436
Alignment:
Q  233 tttactataaatatagatcttgtatcagagtaaacctt----gagctagagagggctgaaacaagggtatagaatga 305  Q
    ||||||||||||||||| |||||||||||| |||| ||    ||| | ||| |||||||||||||||| ||||||||    
T  7092512 tttactataaatatagaccttgtatcagagcaaactttgagagagatggagggggctgaaacaagggtttagaatga 7092436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 231 - 302
Target Start/End: Original strand, 9680768 - 9680844
Alignment:
Q  231 cttttactataaatatagatcttgtatcaga-gtaaaccttgagc----tagagagggctgaaacaagggtatagaa 302  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||     ||||| ||| |||||||||||| |||||    
T  9680768 cttttactataaatatagaccttgtatcagatgtaaaccttgagagagatagagggggttgaaacaagggtttagaa 9680844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 144
Target Start/End: Complemental strand, 34547373 - 34547256
Alignment:
Q  27 tgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag-aattttgtgaggcaagtcactg 124  Q
    |||||||||||||||||||||||  |||||  | ||||||| |||||||||||| || || |||||||| ||||||| ||  || ||||| |||  ||||    
T  34547373 tgtgagagttaacttaaaatcagaaatctg-gagaatcgtgtcacgatggagaagcatcgcgccacgattgttgaagcaagattctgagg-aagctactg 34547276  T
Q  125 gaaatttcgtgccacgatgg 144  Q
    ||| ||||||||||||||||    
T  34547275 gaattttcgtgccacgatgg 34547256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 1047417 - 1047320
Alignment:
Q  113 ggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttg 211  Q
    |||||| |||||||||  ||||| |||||||||||| ||  |||||||||||||||| |||| |  || || | |||||||||||||||  ||||||||    
T  1047417 ggcaaggcactggaaaaatcgtggcacgatggggtctcatcgtggcacgatggtgcgctggcggataaaaata-aaacgtatttttgggagcagatttg 1047320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 1049813 - 1049767
Alignment:
Q  27 tgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgat 73  Q
    |||||||||||||||||||||| ||||||||  ||||||| ||||||    
T  1049813 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgat 1049767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 304
Target Start/End: Complemental strand, 7094759 - 7094684
Alignment:
Q  233 tttactataaatatagatcttgtatcagagtaaaccttgagc----tagagagggctgaaacaagggtatagaatg 304  Q
    |||| |||||||||||| |||||||||||| |||| |||||     ||||| |||||||||||||||| |||||||    
T  7094759 tttattataaatatagaccttgtatcagagcaaactttgagagagatagagggggctgaaacaagggtttagaatg 7094684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 295
Target Start/End: Original strand, 11757175 - 11757246
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagc----tagagagggctgaaacaaggg 295  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||     ||||| |||||||||||||||    
T  11757175 atacttttactataaatatagaccttgtatcaggctaaactttgagagagatagagggggctgaaacaaggg 11757246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 295
Target Start/End: Original strand, 20299405 - 20299476
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagc----tagagagggctgaaacaaggg 295  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||     ||||| |||||||||||||||    
T  20299405 atacttttactataaatatagaccttgtatcaggctaaactttgagagagatagagggggctgaaacaaggg 20299476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 75
Target Start/End: Original strand, 22392290 - 22392340
Alignment:
Q  25 attgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatgg 75  Q
    |||||||||||||| ||||||||||| | || | |||||||||||||||||    
T  22392290 attgtgagagttaatttaaaatcaggttatggagaaatcgtgccacgatgg 22392340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 296
Target Start/End: Complemental strand, 27832969 - 27832903
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagg-gctgaaacaagggt 296  Q
    |||||||||||||||||| |  |||||||||| |||||||| | ||||| || ||||||||||||||    
T  27832969 cttttactataaatataggttgtgtatcagagcaaaccttgtgatagagtggagctgaaacaagggt 27832903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 40946076 - 40946149
Alignment:
Q  29 tgagagttaacttaaaatcaggat-ctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag 102  Q
    ||||||||||||||||||||| || ||| || ||||||||||||||| |||| |  ||||||||||| |||||||    
T  40946076 tgagagttaacttaaaatcagaattctg-aagaatcgtgccacgatgaagaagcttcgtgccacgattgttgaag 40946149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 174
Target Start/End: Original strand, 2935156 - 2935217
Alignment:
Q  113 ggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggc 174  Q
    |||||| |||||||||  ||||| |||||||||||| ||  |||||||||||||||| ||||    
T  2935156 ggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 2935217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 7349617 - 7349572
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgag 273  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||    
T  7349617 atacttttactataaatatagaccttgtatcaggctaaactttgag 7349572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 174
Target Start/End: Complemental strand, 9027601 - 9027540
Alignment:
Q  113 ggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggc 174  Q
    |||||| |||||||||  ||||| |||||||||||| ||  |||||||||||||||| ||||    
T  9027601 ggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 9027540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 174
Target Start/End: Original strand, 22107953 - 22108014
Alignment:
Q  113 ggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggc 174  Q
    |||||| |||||||||  ||||| |||||||||||| ||  |||||||||||||||| ||||    
T  22107953 ggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 22108014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 174
Target Start/End: Original strand, 22136964 - 22137025
Alignment:
Q  113 ggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggc 174  Q
    |||||| |||||||||  ||||| |||||||||||| ||  |||||||||||||||| ||||    
T  22136964 ggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 22137025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Original strand, 28485513 - 28485558
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgag 273  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||    
T  28485513 atacttttactataaatatagaccttgtatcaggctaaactttgag 28485558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 174
Target Start/End: Original strand, 40549713 - 40549774
Alignment:
Q  113 ggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggc 174  Q
    |||||| |||||||||  ||||| |||||||||||| ||  |||||||||||||||| ||||    
T  40549713 ggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 40549774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 174
Target Start/End: Original strand, 40551991 - 40552052
Alignment:
Q  113 ggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggc 174  Q
    |||||| |||||||||  ||||| |||||||||||| ||  |||||||||||||||| ||||    
T  40551991 ggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 40552052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 43253862 - 43253817
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgag 273  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||    
T  43253862 atacttttactataaatatagaccttgtatcaggctaaactttgag 43253817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 260
Target Start/End: Original strand, 18345488 - 18345520
Alignment:
Q  228 atacttttactataaatatagatcttgtatcag 260  Q
    |||||||||||||||||||||| ||||||||||    
T  18345488 atacttttactataaatatagaccttgtatcag 18345520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 260
Target Start/End: Original strand, 38396237 - 38396269
Alignment:
Q  228 atacttttactataaatatagatcttgtatcag 260  Q
    |||||||||||||||||||||| ||||||||||    
T  38396237 atacttttactataaatatagaccttgtatcag 38396269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 96
Target Start/End: Original strand, 42057188 - 42057232
Alignment:
Q  52 tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatgg 96  Q
    |||| |||||||||||||||||||  || ||||||||||||||||    
T  42057188 tctggaaaaatcgtgccacgatgggaaaccaacgtgccacgatgg 42057232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 302
Target Start/End: Original strand, 48457601 - 48457678
Alignment:
Q  229 tacttttactataaatatagatcttgtatcagagtaaaccttgagc----tagagagggctgaaacaagggtatagaa 302  Q
    |||||| |||||||||||||| ||||||||||  ||||| |||||     ||||| |||||||||||||||| |||||    
T  48457601 tactttcactataaatatagaccttgtatcaggctaaactttgagagagatagagggggctgaaacaagggtttagaa 48457678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 109; Significance: 1e-54; HSPs: 82)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 27 - 302
Target Start/End: Original strand, 38881845 - 38882121
Alignment:
Q  27 tgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaagaattttgtgaggcaagtcactgga 126  Q
    |||||||||||||||||||||| ||||||||  ||||||| |||||| |     ||||||| ||||||||  |    | ||| ||||||||| |||||||    
T  38881845 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgattgctgggcaacgtggcacgatggaggttttagtttttgaggcaaggcactgga 38881944  T
Q  127 aatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagc 226  Q
    ||  ||||| |||||||||||| ||  |||||||||||||||| |||| |||||||||| |||||||||||||||| |||||||| | ||||||||||||    
T  38881945 aaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggcgaataacagaaacgtatttttgggtgcagatttgttccaaattttaagc 38882044  T
Q  227 gatacttttactataaatatagatcttgtatcagagtaaaccttgagctaga-gagggctgaaacaagggtatagaa 302  Q
    || |||||||||||||||||||| |||||||||||| |||| | ||| |||| | |||||||||||||||| |||||    
T  38882045 gaaacttttactataaatatagaccttgtatcagagcaaacttggagatagaggggggctgaaacaagggtttagaa 38882121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 154 - 305
Target Start/End: Complemental strand, 36402739 - 36402589
Alignment:
Q  154 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatctt 253  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  36402739 gtggcacgatggtgcgttggcaacgaataacagaaacgtatttttgggtgcagatttg-ttcaaattttaagcgatacttttactataaatatagacctt 36402641  T
Q  254 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatga 305  Q
     ||||||||||||| ||||| ||||| |||||||||||||||| ||||||||    
T  36402640 atatcagagtaaacgttgagatagagggggctgaaacaagggtttagaatga 36402589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 25 - 302
Target Start/End: Original strand, 21947768 - 21948041
Alignment:
Q  25 attgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaagaatt---ttgtgaggcaagtca 121  Q
    |||||||||||||||||||||||||| |||||| |||||||| ||||||||  |  ||||||| ||||||   || ||  ||   || ||||| ||||||    
T  21947768 attgtgagagttaacttaaaatcaggttctgcagaaatcgtggcacgatggctaggcaacgtgacacgat---tggaggtttcagttttgaggtaagtca 21947864  T
Q  122 ctggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattt 221  Q
    |||||  || |||| ||||||||| |  ||| ||||||||||||||   ||||||||||||||| |||| ||||||||||| |||||||| | |||||||    
T  21947865 ctggactttacgtggcacgatgggattgcaacgtggcacgatggtg---tggcagcgaataacagaaacatatttttgggtgcagatttgttccaaattt 21947961  T
Q  222 taagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||||||||||| ||||||||||||||||  ||||| ||||| |||||||||||||||| |||||    
T  21947962 taagcgatacttttactataaatatagaccttgtatcagagtaaattttgagatagag-gggctgaaacaagggtttagaa 21948041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 154 - 302
Target Start/End: Complemental strand, 25921885 - 25921737
Alignment:
Q  154 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatctt 253  Q
    |||||||||||||||| || |||||||||||| |||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||| |||    
T  25921885 gtggcacgatggtgcgctgacagcgaataacagaaacgtatttttgggtgcagatttgttccaaattttaagcgatacttttactataaatatagacctt 25921786  T
Q  254 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||| |||| ||||| ||||| |||||||||||||||| |||||    
T  25921785 gtatcagagcaaactttgagatagagggggctgaaacaagggtttagaa 25921737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 110 - 302
Target Start/End: Complemental strand, 20507918 - 20507726
Alignment:
Q  110 tgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatt 209  Q
    |||||||||||| ||||  ||||||| ||||||||| |  |||  |||||||| |||||| | ||||||||||||| |||| ||||||||||  ||||||    
T  20507918 tgaggcaagtcattggatttttcgtggcacgatgggattgcaacatggcacgaaggtgcgctagcagcgaataacagaaacatatttttgggagcagatt 20507819  T
Q  210 tgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    || | |||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||| |||||    
T  20507818 tgttccaagatttaagcgatacttttactataaatatagatcttgtatcagagtaaactttgagatagagggggctgaaacaagggtttagaa 20507726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 154 - 305
Target Start/End: Complemental strand, 12556335 - 12556184
Alignment:
Q  154 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatctt 253  Q
    ||||||||||| |||| ||||||||||||||| ||| ||||||||| || |||||||| |||||| |||||||||||||||||||||||||||||| |||    
T  12556335 gtggcacgatgatgcgctggcagcgaataacagaaatgtatttttgtgtacagatttgtttcaaaatttaagcgatacttttactataaatatagacctt 12556236  T
Q  254 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatga 305  Q
    |||||||||||||| ||||| ||||| ||||||||| |||||| ||||||||    
T  12556235 gtatcagagtaaactttgagatagagggggctgaaataagggtttagaatga 12556184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 171 - 302
Target Start/End: Complemental strand, 2818731 - 2818600
Alignment:
Q  171 tggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaacctt 270  Q
    ||||||||||||||| ||||||||||| |||| |||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||    
T  2818731 tggcagcgaataacaaaaacgtattttcgggtgcagatttgttccaaattttaagcgatacttttactataaatatagaccttgtatcagagtaaacttt 2818632  T
Q  271 gagctagagagggctgaaacaagggtatagaa 302  Q
    ||| ||||| |||||||||||||||| |||||    
T  2818631 gagatagagggggctgaaacaagggtttagaa 2818600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 27 - 296
Target Start/End: Original strand, 16775897 - 16776167
Alignment:
Q  27 tgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaagaattt---tgtgaggcaagtcact 123  Q
    ||||||| |||||||||||||||||||||||  ||||||| ||||||||  |  ||||||| ||||||   || ||  ||    | ||||||||  ||||    
T  16775897 tgtgagaattaacttaaaatcaggatctgcaggaatcgtggcacgatggcaaggcaacgtgacacgat---tggaggtttcaagtttgaggcaaagcact 16775993  T
Q  124 ggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaatttta 223  Q
    | |||  ||||| |||||||||||| ||  |||||||||||||||| ||||| |||| |||| |||| |||||||| ||  ||||||| | |||||||||    
T  16775994 gaaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcatcgaaaaacagaaacatatttttgagtgaagatttgttccaaatttta 16776093  T
Q  224 agcgatacttttactat-aaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggt 296  Q
    ||||||||||||||||| ||||||||| |||||||| ||| |||| ||||| ||||| ||||||||||||||||    
T  16776094 agcgatacttttactataaaatatagaccttgtatctgagcaaactttgagatagagggggctgaaacaagggt 16776167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 112 - 302
Target Start/End: Original strand, 4236455 - 4236644
Alignment:
Q  112 aggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttg 211  Q
    ||||||| |||||||||  ||||| ||| ||||| || ||  |||||||||||||||| |||||| ||| |||| ||||||||||| | || ||||||||    
T  4236455 aggcaaggcactggaaaaatcgtggcacaatgggatcgcatcgtggcacgatggtgcgctggcagggaaaaacagaaacgtatttt-gagtgcagatttg 4236553  T
Q  212 cttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
     | ||||||||||||||||||||||||||||||||||| |||||||||||| |||| | ||| || || ||||||||||||| || |||||    
T  4236554 ttccaaattttaagcgatacttttactataaatatagaccttgtatcagagcaaacttggagataaagggggctgaaacaagagtttagaa 4236644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 154 - 302
Target Start/End: Original strand, 6756361 - 6756509
Alignment:
Q  154 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatctt 253  Q
    |||||||||||||||| ||||||||||||||| |||||||||||| ||| |||||||  | |||||||||||  ||||||||||||| ||||||||||||    
T  6756361 gtggcacgatggtgcgctggcagcgaataacagaaacgtattttttggtgcagatttattccaaattttaagttatacttttactattaatatagatctt 6756460  T
Q  254 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||| | ||||| ||||| ||||| | |||||||||| ||| |||||    
T  6756461 gtatcatattaaactttgagatagagggagctgaaacaatggtttagaa 6756509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 120 - 273
Target Start/End: Complemental strand, 21684907 - 21684754
Alignment:
Q  120 cactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaat 219  Q
    |||||||||  ||||| |||||||||||| ||  |||||||||||||||| |||||||||| |||| |||| |||||||| || |||||||| | |||||    
T  21684907 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttacaaat 21684808  T
Q  220 tttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgag 273  Q
    ||||||| | |||||||||||||||||||| ||||||||||  ||||| |||||    
T  21684807 tttaagcaaaacttttactataaatatagaccttgtatcaggctaaactttgag 21684754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 155 - 292
Target Start/End: Complemental strand, 31466389 - 31466252
Alignment:
Q  155 tggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatcttg 254  Q
    ||||||||||||||  |||||| ||||| |||||| |||||||||||| |||||||| | |||||||||||||| |||||||||||||||||||| ||||    
T  31466389 tggcacgatggtgcactggcagggaataccataaatgtatttttgggtgcagatttgttccaaattttaagcgacacttttactataaatatagaccttg 31466290  T
Q  255 tatcagagtaaaccttgagctagagagggctgaaacaa 292  Q
    ||||||| ||||| ||||| || |  ||||||||||||    
T  31466289 tatcagactaaactttgagataaaaggggctgaaacaa 31466252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 154 - 302
Target Start/End: Original strand, 2174786 - 2174934
Alignment:
Q  154 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatctt 253  Q
    |||||||||||||||  |||||||||| |||| |||| |||||||| || |||||||| | ||||||||||||||| ||||||||||||||| ||  |||    
T  2174786 gtggcacgatggtgcactggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaattttaagcgatgcttttactataaatacaggcctt 2174885  T
Q  254 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||| |||| | ||| ||||| |||||||||||||||| |||||    
T  2174886 gtatcagagcaaacttggagatagagggggctgaaacaagggtttagaa 2174934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 155 - 267
Target Start/End: Original strand, 39797956 - 39798068
Alignment:
Q  155 tggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatcttg 254  Q
    ||||||||||||||| ||||||||||||||| |||| ||||||||||| |||||||| | |||||||||||| | |||||||||||||||||||| ||||    
T  39797956 tggcacgatggtgcgctggcagcgaataacagaaacatatttttgggtgcagatttgttccaaattttaagcaaaacttttactataaatatagaccttg 39798055  T
Q  255 tatcagagtaaac 267  Q
    ||| |||||||||    
T  39798056 tattagagtaaac 39798068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 40222388 - 40222553
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg 99  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||  |||||  | |||||||||||||||||||| |||||||||||||| ||||    
T  40222388 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctg-gagaatcgtgccacgatggagaagcaacgtgccacgattgttg 40222486  T
Q  100 aag-aattttgtgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggt 166  Q
    ||| ||  || ||| || |||||| |||||  |||||||||||||   || ||| |||||||||||||    
T  40222487 aagcaagattctgaagc-agtcacaggaaaaatcgtgccacgatgaaatcgcaacgtggcacgatggt 40222553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 659688 - 659761
Alignment:
Q  2 ctgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatgg 75  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||    
T  659688 ctgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcaggttctgcagaaatcgtggcacgatgg 659761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 228 - 299
Target Start/End: Original strand, 18596588 - 18596659
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtata 299  Q
    |||||||||||||||||||||| |||| |||||||||||||||| | ||||| |||||||||||||||||||    
T  18596588 atacttttactataaatatagaccttgaatcagagtaaaccttgggatagagggggctgaaacaagggtata 18596659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 228 - 303
Target Start/End: Complemental strand, 41586044 - 41585969
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaat 303  Q
    ||||||||||||||||||||| | |||||||||||||||||||||| || || |||||||||||||||| ||||||    
T  41586044 atacttttactataaatataggttttgtatcagagtaaaccttgagataaagggggctgaaacaagggtttagaat 41585969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 236 - 302
Target Start/End: Complemental strand, 6661512 - 6661446
Alignment:
Q  236 actataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||| |||||    
T  6661512 actataaatatagaccttgtatcagagtaaaccttgagatagagagggttgaaacaagggtttagaa 6661446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 6747018 - 6747119
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg 99  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||| | ||||  | |||||||||||||||||||| |  ||||||||||| ||||    
T  6747018 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaattctg-gagaatcgtgccacgatggagaagcttcgtgccacgattgttg 6747116  T
Q  100 aag 102  Q
    |||    
T  6747117 aag 6747119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 204 - 302
Target Start/End: Original strand, 31542652 - 31542750
Alignment:
Q  204 cagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||| | || ||||||||| | |||||||||||||||||||| ||||||||| || |||| ||||| ||||| |||||||||||||||| |||||    
T  31542652 cagatttgttacagattttaagcaagacttttactataaatatagaccttgtatcaaagcaaactttgagatagagggggctgaaacaagggtttagaa 31542750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 20504478 - 20504406
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgat 73  Q
    |||||| ||||||| | ||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||    
T  20504478 actgatttgaagtcaatgtggagaattgtgagagttaacttaaaatcaggttctgcagaaatcgtggcacgat 20504406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 228 - 304
Target Start/End: Complemental strand, 26098589 - 26098513
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatg 304  Q
    |||||||||||||||||||||| |||| |||||||||||||| ||| ||||| ||||||||| |||||| |||||||    
T  26098589 atacttttactataaatatagaccttgaatcagagtaaacctggagatagagggggctgaaataagggtttagaatg 26098513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 231 - 302
Target Start/End: Original strand, 36208524 - 36208596
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctg-aaacaagggtatagaa 302  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||| |||||||||| |||||    
T  36208524 cttttactataaatatagaccttgtatcagagtaaaccttgagatagagggggctgaaaacaagggtttagaa 36208596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 27 - 169
Target Start/End: Original strand, 42237954 - 42238096
Alignment:
Q  27 tgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag-aattttgtgaggcaagtcactg 124  Q
    |||||||||||||||||||||||  |||||  | |||||||||||||||||||| |||||||||||||| ||||||| ||  || ||| || ||||||||    
T  42237954 tgtgagagttaacttaaaatcagaaatctg-gagaatcgtgccacgatggagaagcaacgtgccacgattgttgaagcaagattttgaagc-agtcactg 42238051  T
Q  125 gaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcg 169  Q
    ||||  |||||||||||||   || ||| ||||||||||||||||    
T  42238052 gaaaaatcgtgccacgatgaaatcgcaacgtggcacgatggtgcg 42238096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 231 - 302
Target Start/End: Original strand, 17072827 - 17072898
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||  ||||||||| |||||||||||| ||||| |||||||||||||||| |||||    
T  17072827 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaa 17072898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 231 - 302
Target Start/End: Original strand, 25904047 - 25904118
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||  ||||||||| |||||||||||| ||||| |||||||||||||||| |||||    
T  25904047 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaa 25904118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 229 - 304
Target Start/End: Original strand, 40221464 - 40221539
Alignment:
Q  229 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatg 304  Q
    |||||||||||||||||||||  |||  ||||||||||||||||| ||||| |||||||||||||||| |||||||    
T  40221464 tacttttactataaatatagacattgactcagagtaaaccttgagatagagggggctgaaacaagggtttagaatg 40221539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 204 - 302
Target Start/End: Original strand, 31544997 - 31545095
Alignment:
Q  204 cagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||| | || ||||||||| | |||||||||||||||||||| ||||||||| || |||| ||||| || || |||||||||||||||| |||||    
T  31544997 cagatttgttacagattttaagcaagacttttactataaatatagaccttgtatcaaagcaaactttgagataaagggggctgaaacaagggtttagaa 31545095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 228 - 304
Target Start/End: Original strand, 26097674 - 26097750
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatg 304  Q
    |||||||||||||||||||||| |||| |||||||||||| ||||| ||||| ||||||||| || ||| |||||||    
T  26097674 atacttttactataaatatagaccttgaatcagagtaaactttgagatagagggggctgaaataaaggtttagaatg 26097750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 34477658 - 34477449
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatc-aggatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg 99  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||| ||  ||||| | ||||||| ||||||||     ||||||| ||||||||  |    
T  34477658 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcaagtttctgc-agaatcgtggcacgatggctgggcaacgtggcacgatggagg 34477560  T
Q  100 aagaattttgtgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttg 199  Q
        | ||| | ||||||| |||||||||  ||||| |||||||||||| ||  |||||||||||||||| |||| |  || || | |||| ||||||||    
T  34477559 ttttagttttttaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcggataaaaata-aaacatatttttg 34477461  T
Q  200 ggtccagatttg 211  Q
    ||| ||||||||    
T  34477460 ggtgcagatttg 34477449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 31544772 - 31544981
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcagg-atctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg 99  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||  ||||| ||||||||| |||||| |     ||||||| ||||||||  |    
T  31544772 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcaggtttctgc-aaaatcgtggcacgatagctgggcaacgtggcacgatggagg 31544870  T
Q  100 aagaattttgtgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttg 199  Q
        | ||| |  |||||| |||||||||  ||||| |||||||||||| ||  | | |||||||||||| |||| |  || |||| |||| ||||||||    
T  31544871 ttttagttttttgggcaaggcactggaaaaatcgtggcacgatggggtctcatcgagacacgatggtgcgctggcggataaaaacagaaacatatttttg 31544970  T
Q  200 ggtccagattt 210  Q
    ||| |||||||    
T  31544971 ggtgcagattt 31544981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 229 - 302
Target Start/End: Complemental strand, 10529436 - 10529363
Alignment:
Q  229 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||| |||||||||||||| |||||||||||| |||| ||||| ||||| ||| |||||||||||| |||||    
T  10529436 tactttcactataaatatagaccttgtatcagagcaaactttgagatagagtgggttgaaacaagggtttagaa 10529363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 10756934 - 10756983
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcagg 50  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  10756934 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagg 10756983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 15355091 - 15355042
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcagg 50  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  15355091 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagg 15355042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 23667083 - 23667132
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcagg 50  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  23667083 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagg 23667132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 229 - 302
Target Start/End: Original strand, 39854426 - 39854498
Alignment:
Q  229 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||| |||||||||||||| |||||||||||| |||| ||||| ||||| |||||||||||||||| |||||    
T  39854426 tactttcactataaatatagaccttgtatcagagcaaactttgagatagag-gggctgaaacaagggtttagaa 39854498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 31466522 - 31466450
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgat 73  Q
    |||||| ||||||| | ||||||||||||||||||||||||||||||||| | ||||  ||||||| ||||||    
T  31466522 actgatttgaagtcaatgtggagaattgtgagagttaacttaaaatcaggttttgcaggaatcgtggcacgat 31466450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 302
Target Start/End: Complemental strand, 34531001 - 34530930
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||| ||||||||||  ||| |||||||||||||||||| ||||| ||||||||||||| || |||||    
T  34531001 cttttactgtaaatatagactttgaatcagagtaaaccttgagatagagggggctgaaacaagtgtttagaa 34530930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 182 - 273
Target Start/End: Complemental strand, 2144978 - 2144884
Alignment:
Q  182 aacataaacgtatttt-tgggtccagatttgcttcaaat-tttaagcgatacttttactataaatatagatcttgtatcaga-gtaaaccttgag 273  Q
    |||||||||||||||| |||| | ||||||| | ||| | ||| || ||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  2144978 aacataaacgtattttctgggccgagatttgttccaattatttgagggatacttttactataaatatagaccttgtatcagatgtaaaccttgag 2144884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 25452120 - 25452213
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgat 94  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||| ||  || ||  | |||||||||||||||||||| || || ||||||||    
T  25452120 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaattagaaatatg-gagaatcgtgccacgatggagaagcatcgcgccacgat 25452213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 18509652 - 18509579
Alignment:
Q  233 tttactataaatatagatcttgtatcagagtaaaccttgagctagaga-gggctgaaacaagggtatagaatga 305  Q
    ||||||||||||||||| ||||||||||| ||||| |||||  | ||| |||||||||||||||| ||||||||    
T  18509652 tttactataaatatagaccttgtatcagactaaactttgagagatagaggggctgaaacaagggtttagaatga 18509579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 296
Target Start/End: Original strand, 20044954 - 20045019
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggt 296  Q
    ||||||||||||||||||   ||||||||||| ||||||||||  |||| ||||||||||||||||    
T  20044954 cttttactataaatataggctttgtatcagagcaaaccttgagacagagggggctgaaacaagggt 20045019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 302
Target Start/End: Complemental strand, 37706117 - 37706044
Alignment:
Q  229 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||| |||||||||||||  ||||||||| |||||||||||| ||||| ||||||||| || ||| |||||    
T  37706117 tacttttgctataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaataaaggtttagaa 37706044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 10474655 - 10474595
Alignment:
Q  234 ttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagg 294  Q
    ||||||||||||||||  ||||||||| |||||||||||  ||||| ||||||||||||||    
T  10474655 ttactataaatatagacattgtatcagtgtaaaccttgaaatagagggggctgaaacaagg 10474595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 230 - 302
Target Start/End: Complemental strand, 31179707 - 31179635
Alignment:
Q  230 acttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||||||||||||||  |||||||| || |||| ||||| ||||| | |||||||||||||| |||||    
T  31179707 acttttactataaatatagacattgtatcaaagcaaactttgagatagagggagctgaaacaagggtttagaa 31179635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 18511547 - 18511473
Alignment:
Q  233 tttactataaatatagatcttgtatcagagtaaacctt--gagctagagagggctgaaacaagggtatagaatga 305  Q
    |||| |||||||||||| ||||||||||| ||||| ||  ||| ||||| |||||||||||||||| ||||||||    
T  18511547 tttaatataaatatagaccttgtatcagactaaactttgagagatagagggggctgaaacaagggtttagaatga 18511473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 231 - 302
Target Start/End: Original strand, 20042994 - 20043065
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||||||||||||   |||||||| || |||||||||| ||||| ||||||||||||| || |||||    
T  20042994 cttttactataaatataggctttgtatcatagcaaaccttgagatagagggggctgaaacaagtgtttagaa 20043065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 231 - 302
Target Start/End: Original strand, 24126800 - 24126871
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||  || |||||| |||||||||||| ||||  ||||||||||||| || |||||    
T  24126800 cttttactataaatatagacattatatcagtgtaaaccttgagatagatggggctgaaacaagagtttagaa 24126871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 231 - 302
Target Start/End: Complemental strand, 31472948 - 31472877
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||| ||  |||||| || |||||||||||| ||||| ||||| |||||||||| |||||    
T  31472948 cttttactataaatatggacattgtattagtgtaaaccttgagatagagggggctaaaacaagggtttagaa 31472877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 165
Target Start/End: Complemental strand, 17841816 - 17841683
Alignment:
Q  32 gagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaagaattttgtgaggcaagtcactggaaatt 130  Q
    ||||||| |||||||||||| |||| | ||| |||| |||||||||||| |||| || |||||| ||| || ||  |  ||| |||||||| |||||| |    
T  17841816 gagttaatttaaaatcaggaatctggagaaa-cgtgtcacgatggagaagcaacatgtcacgattgttaaacaagatcctgaagcaagtcattggaaaat 17841718  T
Q  131 tcgtgccacgatggggtcacaaggtggcacgatgg 165  Q
    ||||||||||||||  ||| || ||||||||||||    
T  17841717 tcgtgccacgatggaatcataacgtggcacgatgg 17841683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 20508001 - 20507955
Alignment:
Q  27 tgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgat 73  Q
    |||||||||||||||||||||||| |||||| |||||||| ||||||    
T  20508001 tgtgagagttaacttaaaatcaggttctgcagaaatcgtggcacgat 20507955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 304
Target Start/End: Original strand, 10586780 - 10586859
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagaga---gggctgaaacaagggtatagaatg 304  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||  ||| |   |||||||||||||||| |||||||    
T  10586780 atacttttactataaatatagaccttgtatcaggctaaactttgagagagatagaggggctgaaacaagggtttagaatg 10586859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 238 - 303
Target Start/End: Original strand, 21288715 - 21288780
Alignment:
Q  238 tataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaat 303  Q
    |||||||||||| |||| || ||||||||||||||| ||||| ||| ||||| |||||| ||||||    
T  21288715 tataaatatagaccttgaattagagtaaaccttgagatagagggggttgaaataagggtttagaat 21288780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 1240078 - 1240153
Alignment:
Q  27 tgtgagagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag 102  Q
    ||||||||||||||||||||||| | ||||  | |||||||||||||||||||| |  ||||||||||| |||||||    
T  1240078 tgtgagagttaacttaaaatcagaattctg-gagaatcgtgccacgatggagaagcttcgtgccacgattgttgaag 1240153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 279
Target Start/End: Original strand, 2723911 - 2723959
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagag 279  Q
    |||||||||||||||||||  ||||||||| |||||||||||| |||||    
T  2723911 cttttactataaatatagacattgtatcagtgtaaaccttgagatagag 2723959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 302
Target Start/End: Original strand, 4409999 - 4410076
Alignment:
Q  229 tacttttactataaatatagatcttgtatcagagtaaaccttgagc----tagagagggctgaaacaagggtatagaa 302  Q
    |||||| |||||||||||||| |||||||||||| |||| |||||     ||||| |||||||||||||||| |||||    
T  4409999 tactttcactataaatatagaccttgtatcagagcaaactttgagagagatagagggggctgaaacaagggtttagaa 4410076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 6744801 - 6744876
Alignment:
Q  27 tgtgagagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag 102  Q
    |||||||||||| |||||||||| | ||||  | ||||||||||||||||||||||  ||||||||||| |||||||    
T  6744801 tgtgagagttaatttaaaatcagaattctg-gagaatcgtgccacgatggagaaacttcgtgccacgattgttgaag 6744876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 260
Target Start/End: Complemental strand, 34477434 - 34477378
Alignment:
Q  204 cagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcag 260  Q
    |||||||| | || ||||||||||| |||||||||||||| ||||| ||||||||||    
T  34477434 cagatttgttacagattttaagcgagacttttactataaaaatagaccttgtatcag 34477378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 661286 - 661247
Alignment:
Q  27 tgtgagagttaacttaaaatcaggatctgcaaaaatcgtg 66  Q
    |||||||||||||||||||||||| |||||| ||||||||    
T  661286 tgtgagagttaacttaaaatcaggttctgcagaaatcgtg 661247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 231 - 302
Target Start/End: Original strand, 695833 - 695904
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||| ||||||||  |||||| || |||||||||||| || || ||| |||||||||||| |||||    
T  695833 cttttactatgaatatagacattgtatgagtgtaaaccttgagataaagggggatgaaacaagggtttagaa 695904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 231 - 273
Target Start/End: Complemental strand, 1189949 - 1189906
Alignment:
Q  231 cttttactataaatatagatcttgtatcaga-gtaaaccttgag 273  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||    
T  1189949 cttttactataaatatagaccttgtatcagatgtaaaccttgag 1189906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 206 - 261
Target Start/End: Original strand, 29748260 - 29748315
Alignment:
Q  206 gatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcaga 261  Q
    |||||| | |||||||| || ||| ||||||||||||||||||| |||||||||||    
T  29748260 gatttgttccaaattttgagggatgcttttactataaatatagaccttgtatcaga 29748315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 231 - 302
Target Start/End: Complemental strand, 39398327 - 39398257
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||||||||||| |  ||||| | | |||||||||||| ||||| |||||||||||||||| |||||    
T  39398327 cttttactataaatataaacattgtaccggtgtaaaccttgagatagag-gggctgaaacaagggtttagaa 39398257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 31179868 - 31179771
Alignment:
Q  113 ggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttg 211  Q
    |||||| |||||||||  ||||| |||||||||||| ||  |||||||||||||||| |||| |  || || | |||||||||||||||  ||||||||    
T  31179868 ggcaagacactggaaaaatcgtggcacgatggggtctcatcgtggcacgatggtgcgctggcgggtaaaaata-aaacgtatttttgggagcagatttg 31179771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 31542528 - 31542626
Alignment:
Q  113 ggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttg 211  Q
    |||||| |||||||||  ||||| |||||||||||| ||  | | |||||||||||| |||| |  || |||| |||| ||||||||||| ||||||||    
T  31542528 ggcaaggcactggaaaaatcgtggcacgatggggtctcatcgagacacgatggtgcgctggcggataaaaacagaaacatatttttgggtgcagatttg 31542626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 289
Target Start/End: Original strand, 42770714 - 42770775
Alignment:
Q  227 gatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaa 289  Q
    ||||||||||||||||||||| |  ||||||| |||||||||||||| ||||| || ||||||    
T  42770714 gatacttttactataaatataaactttgtatc-gagtaaaccttgagatagaggggactgaaa 42770775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 3373379 - 3373334
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgag 273  Q
    |||||||||||||||||||||| ||||||||| || |||| |||||    
T  3373379 atacttttactataaatatagaccttgtatcaaagcaaactttgag 3373334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 102
Target Start/End: Original strand, 4409796 - 4409872
Alignment:
Q  26 ttgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag 102  Q
    |||||| ||||||||||||||||| | |||| || ||||||||||||||| |||| |  ||||||||||| |||||||    
T  4409796 ttgtgaaagttaacttaaaatcagagttctg-aagaatcgtgccacgatgaagaagcttcgtgccacgattgttgaag 4409872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 174
Target Start/End: Original strand, 10749591 - 10749652
Alignment:
Q  113 ggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggc 174  Q
    |||||| |||||||||  ||||| |||||||||||| ||  |||||||||||||||| ||||    
T  10749591 ggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 10749652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 174
Target Start/End: Original strand, 10757046 - 10757107
Alignment:
Q  113 ggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggc 174  Q
    |||||| |||||||||  ||||| |||||||||||| ||  |||||||||||||||| ||||    
T  10757046 ggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 10757107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 174
Target Start/End: Complemental strand, 15354979 - 15354918
Alignment:
Q  113 ggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggc 174  Q
    |||||| |||||||||  ||||| |||||||||||| ||  |||||||||||||||| ||||    
T  15354979 ggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 15354918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 174
Target Start/End: Complemental strand, 15357255 - 15357194
Alignment:
Q  113 ggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggc 174  Q
    |||||| |||||||||  ||||| |||||||||||| ||  |||||||||||||||| ||||    
T  15357255 ggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 15357194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Original strand, 15552176 - 15552221
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgag 273  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||    
T  15552176 atacttttactataaatatagaccttgtatcaggctaaactttgag 15552221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 302
Target Start/End: Complemental strand, 17818826 - 17818754
Alignment:
Q  229 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||  ||||||||||||  ||||||||| ||||||||||||  |||| ||||||||||||| || |||||    
T  17818826 tacttttgttataaatatagacattgtatcagtgtaaaccttgagaaagag-gggctgaaacaagagtttagaa 17818754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 302
Target Start/End: Original strand, 18466625 - 18466699
Alignment:
Q  232 ttttactataaatatagatcttgtatcagagtaaaccttgagc----tagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||| ||||||||||  ||||| |||||     ||||| |||||||||||||||| |||||    
T  18466625 ttttactataaatatagaccttgtatcaggctaaactttgagagagatagagggggctgaaacaagggtttagaa 18466699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Original strand, 27910386 - 27910431
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgag 273  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||    
T  27910386 atacttttactataaatatagaccttgtatcaggttaaactttgag 27910431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Original strand, 27912471 - 27912516
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgag 273  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||    
T  27912471 atacttttactataaatatagaccttgtatcaggctaaactttgag 27912516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 10529638 - 10529563
Alignment:
Q  27 tgtgagagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag 102  Q
    ||||||||||||||||||||||| | ||||  | |||||||||||||| ||||| |  ||||||||||| |||||||    
T  10529638 tgtgagagttaacttaaaatcagaattctg-gagaatcgtgccacgatcgagaagcttcgtgccacgattgttgaag 10529563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 12556442 - 12556402
Alignment:
Q  26 ttgtgagagttaacttaaaatcaggatctgcaaaaatcgtg 66  Q
    ||||||||||||| ||||||||||| |||||| ||||||||    
T  12556442 ttgtgagagttaatttaaaatcaggttctgcagaaatcgtg 12556402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 260
Target Start/End: Original strand, 25803957 - 25803989
Alignment:
Q  228 atacttttactataaatatagatcttgtatcag 260  Q
    |||||||||||||||||||||| ||||||||||    
T  25803957 atacttttactataaatatagaccttgtatcag 25803989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 204 - 260
Target Start/End: Complemental strand, 34479795 - 34479739
Alignment:
Q  204 cagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcag 260  Q
    |||||||| | || ||||||||||| || ||||||||||| ||||| ||||||||||    
T  34479795 cagatttgttacagattttaagcgagacctttactataaaaatagaccttgtatcag 34479739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 6e-53; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 105 - 302
Target Start/End: Complemental strand, 24162673 - 24162476
Alignment:
Q  105 ttttgtgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtcc 204  Q
    |||| ||||||||| |||||||||  ||||| |||||||||||| ||  |||||||||| ||||| |||| |||||||  | |||||||||||||||| |    
T  24162673 ttttttgaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgattgtgcgctggctgcgaatattagaaacgtatttttgggtgc 24162574  T
Q  205 agatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||| |||| ||||| ||||| |||||||||||||||| |||||    
T  24162573 agatttgtttcaaattttaagcgaaacttttactataaatatagaccttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaa 24162476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 24 - 302
Target Start/End: Complemental strand, 21521237 - 21520957
Alignment:
Q  24 aattgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaagaatt---ttgtgaggcaagtc 120  Q
    ||||||||||||||||||||||||||| ||| ||  ||||||| ||||||||     ||||||| ||||||   || ||  ||   || ||| ||||| |    
T  21521237 aattgtgagagttaacttaaaatcaggttctacaggaatcgtggcacgatggctgggcaacgtggcacgat---tggaggtttcagttttgaagcaagcc 21521141  T
Q  121 actggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaatt 220  Q
    ||||||||  ||||||||||||||| || ||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| | |||| |    
T  21521140 actggaaaaatcgtgccacgatgggatcgcaacgtggcacgatggtgcgctggcagcgaataacataaacgtatttttgggtgcagatttgttccaaaat 21521041  T
Q  221 ttaagcgatacttttactataaatatagatcttgtatcagagtaaacctt--gagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||||||||||||||||||||| | ||||||||||| ||||| ||  ||| ||||  |||||||||||||||| |||||    
T  21521040 ttaagcgatacttttactataaatataaaccttgtatcagactaaactttgagagatagatggggctgaaacaagggtttagaa 21520957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 110 - 302
Target Start/End: Complemental strand, 22407865 - 22407673
Alignment:
Q  110 tgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatt 209  Q
    |||||||||||| || |||  | ||| ||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  22407865 tgaggcaagtcagtgaaaaaattgtggcacgatgggatcacaacgtggcacgatggtgcgttggcagcgaataacagaaacgtatttttgggtgcagatt 22407766  T
Q  210 tgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    || |  ||||||||||| |||||||||||||||||||||| |||||||||||||||||  |||| || || | |||||||||||||| |||||    
T  22407765 tgttcaaaattttaagcaatacttttactataaatatagaccttgtatcagagtaaactgtgagatatagggtgctgaaacaagggtttagaa 22407673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 159 - 302
Target Start/End: Complemental strand, 40032465 - 40032322
Alignment:
Q  159 acgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatc 258  Q
    ||||||||||| ||||||||||||||| |||||||||||||||| |||||||| | ||| ||||||||||||||||||||||||||||||| ||||||||    
T  40032465 acgatggtgcgctggcagcgaataacagaaacgtatttttgggtgcagatttgttccaagttttaagcgatacttttactataaatatagaccttgtatc 40032366  T
Q  259 agagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||| ||||| ||||| |||||||||||||||| |||||    
T  40032365 agagtaaactttgagatagagggggctgaaacaagggtttagaa 40032322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 110 - 296
Target Start/End: Original strand, 27104598 - 27104784
Alignment:
Q  110 tgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatt 209  Q
    ||||||||| |||||||||  ||||| ||||||||| || ||  |||||||||||||||| |||||| ||| ||||||||| |||||||| || ||||||    
T  27104598 tgaggcaaggcactggaaaaatcgtggcacgatgggatcgcatcgtggcacgatggtgcgctggcagggaaaaacataaacatatttttgagtgcagatt 27104697  T
Q  210 tgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggt 296  Q
    || | |||||||||||||| |||||||||||||||||||| |||||||||||| |||| ||||| ||||| ||||||||||||||||    
T  27104698 tgttccaaattttaagcgaaacttttactataaatatagaccttgtatcagagaaaactttgagatagagggggctgaaacaagggt 27104784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 6259380 - 6259079
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgat-ggttg 99  Q
    |||||| | ||||| ||||||||||||  ||||||||||||||||||||| |||||| |||||||| ||||||||     ||||||| ||| || || ||    
T  6259380 actgatttaaagtcaaggtggagaattaagagagttaacttaaaatcaggttctgcagaaatcgtggcacgatggctgtgcaacgtggcactattggatg 6259281  T
Q  100 aagaattttgtgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttg 199  Q
        | ||| ||||| |||||||||||||  ||||| ||||||||| || ||| ||| |||||||||||| |||| | |||||||| |||| ||||||||    
T  6259280 tttcagttt-tgaggaaagtcactggaaaaatcgtggcacgatgggatcgcaacgtgacacgatggtgcgctggcggtgaataacagaaacatatttttg 6259182  T
Q  200 ggtccagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtata 299  Q
    ||| |||| ||| | ||||||||||||||||||||||||||||||||||| ||||||| ||| ||||| ||||| |||||  || ||||||||| || ||    
T  6259181 ggtgcagacttgttccaaattttaagcgatacttttactataaatatagaccttgtattagactaaactttgagatagaggaggatgaaacaagagttta 6259082  T
Q  300 gaa 302  Q
    |||    
T  6259081 gaa 6259079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 110 - 302
Target Start/End: Original strand, 42064314 - 42064506
Alignment:
Q  110 tgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatt 209  Q
    ||||||||  |||||||||  ||||| ||||||||| |||||  |||||||||||||||| |||||||||| |||| |||| |||||||  || ||||||    
T  42064314 tgaggcaaagcactggaaaaatcgtggcacgatgggatcacatcgtggcacgatggtgcgctggcagcgaaaaacagaaacatattttttagtgcagatt 42064413  T
Q  210 tgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    || | ||||||||||||||||||||||||||||||||||| |||||||||||| |||| | ||| ||||| | |||||||||||||| |||||    
T  42064414 tgttccaaattttaagcgatacttttactataaatatagaccttgtatcagagcaaacttggagatagagggagctgaaacaagggtttagaa 42064506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 120 - 302
Target Start/End: Complemental strand, 13910490 - 13910308
Alignment:
Q  120 cactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaat 219  Q
    |||||||||  ||||| |||||||||||| ||  |||||||||||||||| |||||||||| |||| |||| |||||||| || |||||||| | |||||    
T  13910490 cactggaaaaatcgtggcacgatggggtcgcattgtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttccaaat 13910391  T
Q  220 tttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||| || |||||||||||||||||||| |||||||||||| |||| | ||| ||||| |||||||||||||||| |||||    
T  13910390 tttaagggaaacttttactataaatatagaccttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaa 13910308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 19502576 - 19502275
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcaggat-ctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg 99  Q
    |||||| |||| || |||||||||||||||| |||||||||||||||||| | ||||| || ||||| ||||||||  |  ||||||| ||||||||  |    
T  19502576 actgatttgaattcaaggtggagaattgtgatagttaacttaaaatcaggtttctgcagaa-tcgtggcacgatggcaaggcaacgtggcacgatggagg 19502478  T
Q  100 aagaattttgtgaggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttg 199  Q
        | ||| | ||||||| |||||||||  ||||| |||||||||||| ||  |||||||||||||||| ||||  ||||||||| |||| ||||||||    
T  19502477 tttcagttttttaggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcgacgaataacagaaacatatttttg 19502378  T
Q  200 ggtccagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtata 299  Q
    | | |||||||| | ||||||||||| || | |||||||||||||||||| |||||||||||| |||| | ||| || || ||||||||||||| || ||    
T  19502377 gttgcagatttgatccaaattttaagggaaaattttactataaatatagaccttgtatcagagcaaacttggagataaagggggctgaaacaagagttta 19502278  T
Q  300 gaa 302  Q
    |||    
T  19502277 gaa 19502275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 112 - 302
Target Start/End: Complemental strand, 19504799 - 19504609
Alignment:
Q  112 aggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttg 211  Q
    ||||||| |||||||||  ||||| |||||||||||| ||  |||||||||||||||| ||||  ||||||||| ||||  |||||| ||| ||||||||    
T  19504799 aggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcgacgaataacagaaacacatttttaggtgcagatttg 19504700  T
Q  212 cttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
     | ||||||||||| || |||||||||||||||||||| |||||||||||| |||| | ||| ||||| |||||||||||||||| |||||    
T  19504699 ttccaaattttaagggaaacttttactataaatatagaccttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaa 19504609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 154 - 302
Target Start/End: Complemental strand, 6264557 - 6264409
Alignment:
Q  154 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatctt 253  Q
    ||||||||||||||| || || |||||||||| |||| ||||||||||| |||||||| | |||||||||||||||| |||||||||||||||||| |||    
T  6264557 gtggcacgatggtgcattagcggcgaataacagaaacatatttttgggtgcagatttgttccaaattttaagcgatatttttactataaatatagacctt 6264458  T
Q  254 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||| ||||| ||||| ||||| |||||||||||| ||| |||||    
T  6264457 gtatcagactaaactttgagatagagggggctgaaacaaaggtttagaa 6264409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 154 - 302
Target Start/End: Complemental strand, 22287748 - 22287600
Alignment:
Q  154 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatctt 253  Q
    ||||||| |||||||| ||||||||||||||| ||| |||| ||||||| || ||||| | ||||||||||||||||||||||||||||||||||| |||    
T  22287748 gtggcaccatggtgcgctggcagcgaataacaaaaatgtatgtttgggtgcatatttgttccaaattttaagcgatacttttactataaatatagacctt 22287649  T
Q  254 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||| | ||||||| ||||| || || |||||||||||||||| |||||    
T  22287648 gtattaaagtaaactttgagatatagggggctgaaacaagggtttagaa 22287600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 154 - 302
Target Start/End: Complemental strand, 43623979 - 43623832
Alignment:
Q  154 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatctt 253  Q
    |||||||||||||||| ||||||| ||||||||||||||||||| |||| |||||||| | |||||||||||| |||||||||||||||| ||||| |||    
T  43623979 gtggcacgatggtgcgctggcagcaaataacataaacgtatttt-gggtgcagatttgttccaaattttaagcaatacttttactataaaaatagacctt 43623881  T
Q  254 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||||||||   ||| ||||| ||| |||||||| ||| |||||    
T  43623880 gtatcagagtaaactgggagatagaggggggtgaaacaatggtttagaa 43623832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 154 - 302
Target Start/End: Complemental strand, 18800713 - 18800566
Alignment:
Q  154 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatctt 253  Q
    |||||||||||||||| | |  ||||| |||| |||| |||||||  || |||||||| | |||||||||| |||||||||||||||||||||||| |||    
T  18800713 gtggcacgatggtgcgctagaggcgaa-aacagaaacatatttttaagtgcagatttgttccaaattttaaacgatacttttactataaatatagacctt 18800615  T
Q  254 gtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||| |||||| | ||| || || |||||||||||||||| |||||    
T  18800614 gtatcagggtaaacatggagatatagggggctgaaacaagggtttagaa 18800566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 176 - 281
Target Start/End: Original strand, 35107165 - 35107270
Alignment:
Q  176 gcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagct 275  Q
    ||||||||||||| |||||||||   | |||||||| | ||||||||||| |||||||||||||||||||||||  |||||||| ||||||||||||| |    
T  35107165 gcgaataacataatcgtatttttcaatgcagatttgttccaaattttaagggatacttttactataaatatagacattgtatcatagtaaaccttgaggt 35107264  T
Q  276 agagag 281  Q
    ||||||    
T  35107265 agagag 35107270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 30478640 - 30478783
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg 99  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||  |||||  | |||||||||||||||||||| || || |||||||| ||||    
T  30478640 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctg-gagaatcgtgccacgatggagaagcatcgcgccacgattgttg 30478738  T
Q  100 aag-aattttgtgaggcaagtcactggaaatttcgtgccacgatgg 144  Q
    ||| ||  || ||||| |||  ||||||||||||||| ||||||||    
T  30478739 aagcaagattctgagg-aagctactggaaatttcgtggcacgatgg 30478783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 227 - 302
Target Start/End: Complemental strand, 37963266 - 37963191
Alignment:
Q  227 gatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||||||  |||||| ||||||||||||||| ||||| |||||||||||||||| |||||    
T  37963266 gatacttttactataaatatagactttgtataagagtaaaccttgagatagagggggctgaaacaagggtttagaa 37963191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 2740568 - 2740669
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg 99  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||  |||||  |  ||||||||||||||||||| || || |||||||||||||    
T  2740568 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctg-gagtatcgtgccacgatggagaagcatcgcgccacgatggttg 2740666  T
Q  100 aag 102  Q
    |||    
T  2740667 aag 2740669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 17943184 - 17943285
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg 99  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||  |||||  | |||||||||||||||||||| || || |||||||| ||||    
T  17943184 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctg-gagaatcgtgccacgatggagaagcatcgcgccacgattgttg 17943282  T
Q  100 aag 102  Q
    |||    
T  17943283 aag 17943285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 22713052 - 22712951
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg 99  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||  |||||  | |||||||||||||||||||| || || |||||||| ||||    
T  22713052 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctg-gagaatcgtgccacgatggagaagcatcgcgccacgattgttg 22712954  T
Q  100 aag 102  Q
    |||    
T  22712953 aag 22712951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 39686610 - 39686711
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg 99  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||  |||||  |  ||||||||||||||||||| || || |||||||||||||    
T  39686610 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctg-gagcatcgtgccacgatggagaagcatcgcgccacgatggttg 39686708  T
Q  100 aag 102  Q
    |||    
T  39686709 aag 39686711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 179 - 292
Target Start/End: Complemental strand, 12342797 - 12342684
Alignment:
Q  179 aataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctaga 278  Q
    |||||||||| | ||||||||||  |||||||| | ||| ||||    ||||||||||||||||||||| |  |||||||||||||||||||||| ||||    
T  12342797 aataacataatcatatttttggggtcagatttgttccaatttttttaggatacttttactataaatatacacattgtatcagagtaaaccttgagataga 12342698  T
Q  279 gagggctgaaacaa 292  Q
    | ||||||||||||    
T  12342697 gggggctgaaacaa 12342684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 28462870 - 28462777
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgat 94  Q
    |||||| ||||||| |||||||||||| ||| |||||||||||||||||| |||| | |||||||||| ||||  |||| ||||||||||||||    
T  28462870 actgatttgaagtcaaggtggagaattatgaaagttaacttaaaatcaggttctggagaaatcgtgcctcgattcagaagcaacgtgccacgat 28462777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 20050580 - 20050438
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg 99  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||  | ||||  | |||||||||||||||||||| || ||||||||||| ||||    
T  20050580 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcaaaattctg-gagaatcgtgccacgatggagaagcatcgtgccacgattgttg 20050482  T
Q  100 aag-aattttgtgaggcaagtcactggaaatttcgtgccacgatg 143  Q
     || ||  || ||||| |||  ||||||| |||||||||||||||    
T  20050481 cagcaagattctgagg-aagctactggaattttcgtgccacgatg 20050438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 30262315 - 30262265
Alignment:
Q  3 tgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcaggatc 53  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  30262315 tgatttgaagtcgaggtggagaattgtgagagttaacttaaaatcaggatc 30262265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 231 - 302
Target Start/End: Complemental strand, 11578439 - 11578368
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||||||||||||| ||| |||||| ||||| |||||| ||||| |||||||||||||||| |||||    
T  11578439 cttttactataaatatagaccttatatcagggtaaatcttgagatagagtgggctgaaacaagggtttagaa 11578368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 231 - 302
Target Start/End: Original strand, 17849037 - 17849108
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||||||||||| |  ||||||||| |||||||||||| ||||| |||||||||||||||| |||||    
T  17849037 cttttactataaatataaacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaa 17849108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 231 - 302
Target Start/End: Original strand, 19007560 - 19007631
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||||||||||||   |||||||| ||||||||||||| ||||| |||||||||||||||| |||||    
T  19007560 cttttactataaatataggctttgtatcatagtaaaccttgagatagagggggctgaaacaagggtttagaa 19007631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 231 - 302
Target Start/End: Complemental strand, 31733100 - 31733029
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||  ||||| |||||||||| ||||| ||||| |||||||||||||||| |||||    
T  31733100 cttttactataaatatagactttgtaacagagtaaacattgagatagagggggctgaaacaagggtttagaa 31733029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 26 - 143
Target Start/End: Original strand, 38190648 - 38190766
Alignment:
Q  26 ttgtgagagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg-aagaattttgtgaggcaagtcact 123  Q
    ||||||||||||| |||||||||||| | || | ||| ||||||||||||||||| |||||||||||||| |||| || ||  |  ||| ||||||||||    
T  38190648 ttgtgagagttaatttaaaatcaggaatatggagaaa-cgtgccacgatggagaagcaacgtgccacgattgttgaaacaagatcctgaagcaagtcact 38190746  T
Q  124 ggaaatttcgtgccacgatg 143  Q
    ||||| ||||||||||||||    
T  38190747 ggaaaattcgtgccacgatg 38190766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 261
Target Start/End: Complemental strand, 37171284 - 37171049
Alignment:
Q  26 ttgtgagagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg-aagaattttgtgaggcaagtcact 123  Q
    ||||||||||||||||||||| |||| |||| | ||| ||||||||||||||||| |||||||||| ||| |||| || ||  |  ||| |||||||| |    
T  37171284 ttgtgagagttaacttaaaataaggaatctggagaaa-cgtgccacgatggagaagcaacgtgccatgattgttgaaacaagatcctgaagcaagtcatt 37171186  T
Q  124 ggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaatttta 223  Q
    | ||| |||||||||||||||  ||  || |||||||||||||||| | | ||  ||||||| ||||||| ||||  ||  ||||||| | || ||||||    
T  37171185 gaaaaattcgtgccacgatggaatcgtaacgtggcacgatggtgcgct-gaaggaaataacaaaaacgta-ttttcagtgaagatttgttccatatttta 37171088  T
Q  224 agcgatacttt-tactataaatatagatcttgtatcaga 261  Q
    || | ||||||  |||||||||||| | |||||||||||    
T  37171087 agggttactttccactataaatataaaccttgtatcaga 37171049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 232 - 305
Target Start/End: Complemental strand, 15539809 - 15539736
Alignment:
Q  232 ttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatga 305  Q
    ||||||||||||||||||  ||||||||| |||||||||||| || || ||| |||||||||||| ||||||||    
T  15539809 ttttactataaatatagacattgtatcagtgtaaaccttgagatatagggggttgaaacaagggtttagaatga 15539736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 36559384 - 36559335
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcagg 50  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  36559384 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagg 36559335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 229 - 302
Target Start/End: Complemental strand, 45280322 - 45280249
Alignment:
Q  229 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||| |||||||||||| | |||||||||||| |||| ||||| ||||| |||||||||||||||| |||||    
T  45280322 tactttcactataaatatataccttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaa 45280249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 187 - 302
Target Start/End: Original strand, 22874018 - 22874133
Alignment:
Q  187 aaacgtatttttgggtccagatttgcttcaaattt-taagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggct 285  Q
    ||||||||||||||| ||||||||| ||||| ||| | || | ||||||| ||||||||| ||   ||||||||||| |||||| ||| ||||| |||||    
T  22874018 aaacgtatttttggg-ccagatttgtttcaattttatgagggttacttttgctataaatacaggctttgtatcagagcaaacctggagatagagggggct 22874116  T
Q  286 gaaacaagggtatagaa 302  Q
    ||||||||||| |||||    
T  22874117 gaaacaagggtttagaa 22874133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 302
Target Start/End: Complemental strand, 11739895 - 11739824
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||  |||||| || |||||||||||| ||||| |||||| ||||||||| |||||    
T  11739895 cttttactataaatatagacattgtattagtgtaaaccttgagatagagggggctggaacaagggtttagaa 11739824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 294
Target Start/End: Complemental strand, 22163282 - 22163219
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagg 294  Q
    |||||||||||||||||||  ||||||||| |||||| ||||| ||||| ||||||||||||||    
T  22163282 cttttactataaatatagacattgtatcagtgtaaactttgagatagagggggctgaaacaagg 22163219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 304
Target Start/End: Complemental strand, 42923849 - 42923771
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaacctt--gagctagagagggctgaaacaagggtatagaatg 304  Q
    |||||||||||||||||||||| |||| |||| ||||||||||  ||| |||||  ||||||||||||||| |||||||    
T  42923849 atacttttactataaatatagaccttgaatcatagtaaaccttgagagatagaggaggctgaaacaagggtttagaatg 42923771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 234 - 296
Target Start/End: Original strand, 3022086 - 3022148
Alignment:
Q  234 ttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggt 296  Q
    ||||||||||||||||  |||||||||||||||||||||| || ||  |||||||||||||||    
T  3022086 ttactataaatatagactttgtatcagagtaaaccttgagatataggaggctgaaacaagggt 3022148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 227 - 273
Target Start/End: Original strand, 40699226 - 40699272
Alignment:
Q  227 gatacttttactataaatatagatcttgtatcagagtaaaccttgag 273  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||    
T  40699226 gatacttttactataaatatagaccttgcatcagagtaaaccttgag 40699272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 228 - 302
Target Start/End: Original strand, 42452700 - 42452774
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||| ||||||||||||  ||||||||||| |||| | ||| ||||| |||||||||||||||| |||||    
T  42452700 atacttttattataaatatagacattgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaa 42452774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 296
Target Start/End: Original strand, 14837193 - 14837258
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggt 296  Q
    |||||||| ||||||||||  ||||||||| |||||||||||| ||||| | ||||||||||||||    
T  14837193 cttttactgtaaatatagacattgtatcagtgtaaaccttgagatagagggagctgaaacaagggt 14837258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 40032587 - 40032538
Alignment:
Q  26 ttgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgatgg 75  Q
    ||||||||||||||||||||||||| |||||| |||||||| ||||||||    
T  40032587 ttgtgagagttaacttaaaatcaggttctgcagaaatcgtggcacgatgg 40032538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 187 - 302
Target Start/End: Original strand, 28196513 - 28196628
Alignment:
Q  187 aaacgtatttttgggtccagatttgcttcaaattt-taagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggct 285  Q
    ||||||||||||||| || |||||  ||| ||||| | || ||| |||||||||||||||||    |||||||||||||||| ||||| ||||| |||||    
T  28196513 aaacgtatttttggg-cctgattttgttccaatttatgagggattcttttactataaatatatgctttgtatcagagtaaacattgagatagagggggct 28196611  T
Q  286 gaaacaagggtatagaa 302  Q
    ||||||| ||| |||||    
T  28196612 gaaacaaaggtttagaa 28196628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 227 - 281
Target Start/End: Complemental strand, 17897581 - 17897526
Alignment:
Q  227 gatacttttactataaatatagatcttgtatcaga-gtaaaccttgagctagagag 281  Q
    ||||||||||||||||||||||| ||||||||||| ||||| |||||| |||||||    
T  17897581 gatacttttactataaatatagaccttgtatcagatgtaaaacttgaggtagagag 17897526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 102
Target Start/End: Original strand, 2735856 - 2735933
Alignment:
Q  25 attgtgagagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag 102  Q
    ||||||||||||||||||||||||| | |||| |  | |||||||||||||||||| || || ||||||||||||||||    
T  2735856 attgtgagagttaacttaaaatcagaaatctggagta-tcgtgccacgatggagaagcatcgcgccacgatggttgaag 2735933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 143
Target Start/End: Complemental strand, 12781751 - 12781635
Alignment:
Q  27 tgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag-aattttgtgaggcaagtcactg 124  Q
    |||||||||||||||||||||||  |||||  | |||||||||||||||||||| || || |||||||| ||||||| ||  || ||||| |||  ||||    
T  12781751 tgtgagagttaacttaaaatcagaaatctg-gataatcgtgccacgatggagaagcatcgcgccacgattgttgaagcaagattctgagg-aagctactg 12781654  T
Q  125 gaaatttcgtgccacgatg 143  Q
    ||||||||||| |||||||    
T  12781653 gaaatttcgtggcacgatg 12781635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 232 - 273
Target Start/End: Complemental strand, 20147082 - 20147041
Alignment:
Q  232 ttttactataaatatagatcttgtatcagagtaaaccttgag 273  Q
    |||||||||||||||||| ||||||||| |||||||||||||    
T  20147082 ttttactataaatatagaccttgtatcaaagtaaaccttgag 20147041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 204 - 261
Target Start/End: Complemental strand, 28462648 - 28462591
Alignment:
Q  204 cagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcaga 261  Q
    |||||||| | ||||||||||| | ||||||||||||||||||| | |||||||||||    
T  28462648 cagatttgttccaaattttaagggttacttttactataaatataaaccttgtatcaga 28462591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 35028473 - 35028550
Alignment:
Q  205 agatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatcaga-gtaaaccttgagctagagag 281  Q
    ||||||| | ||| |||| || |||||||||||||||||||||||  |||||||||| |||||||||||  |||||||    
T  35028473 agatttgttccaattttttagggatacttttactataaatatagacattgtatcagatgtaaaccttgaattagagag 35028550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 39679698 - 39679773
Alignment:
Q  27 tgtgagagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag 102  Q
    ||||||||||||||||||||||| | |||| |  | |||||||||||||||||| || || ||||||||||||||||    
T  39679698 tgtgagagttaacttaaaatcagaaatctggagca-tcgtgccacgatggagaagcatcgcgccacgatggttgaag 39679773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 227 - 270
Target Start/End: Complemental strand, 20146946 - 20146903
Alignment:
Q  227 gatacttttactataaatatagatcttgtatcagagtaaacctt 270  Q
    |||| |||||||||||||||||| ||||||||| ||||||||||    
T  20146946 gatatttttactataaatatagaccttgtatcaaagtaaacctt 20146903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 239 - 302
Target Start/End: Complemental strand, 34979906 - 34979843
Alignment:
Q  239 ataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||  |||||| || |||||||||||| ||||| ||||||||||||| || |||||    
T  34979906 ataaatatagacattgtattagtgtaaaccttgagatagagggggctgaaacaagcgtttagaa 34979843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 57 - 95
Target Start/End: Original strand, 9653786 - 9653824
Alignment:
Q  57 aaaaatcgtgccacgatggagaaacaacgtgccacgatg 95  Q
    |||||||||||||||||||| || |||||||||||||||    
T  9653786 aaaaatcgtgccacgatggaaaaccaacgtgccacgatg 9653824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 273
Target Start/End: Original strand, 20589581 - 20589623
Alignment:
Q  231 cttttactataaatatagatcttgtatcagagtaaaccttgag 273  Q
    ||||||||||||||||||| |||||||||||  ||||||||||    
T  20589581 cttttactataaatatagaccttgtatcagatgaaaccttgag 20589623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 232 - 302
Target Start/End: Original strand, 38020064 - 38020134
Alignment:
Q  232 ttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    ||||||||||||||||||  ||||||| | |||||||| ||| ||||| ||| || ||||||||| |||||    
T  38020064 ttttactataaatatagacattgtatcggtgtaaacctggagatagagggggttggaacaagggtttagaa 38020134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 42064231 - 42064277
Alignment:
Q  27 tgtgagagttaacttaaaatcaggatctgcaaaaatcgtgccacgat 73  Q
    |||||||||||||||||||||| ||||||||  ||||||| ||||||    
T  42064231 tgtgagagttaacttaaaatcaagatctgcaggaatcgtggcacgat 42064277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 23452579 - 23452534
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgag 273  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||    
T  23452579 atacttttactataaatatagaccttgtatcaggctaaactttgag 23452534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 144
Target Start/End: Complemental strand, 28462787 - 28462706
Alignment:
Q  63 cgtgccacgatggagaaacaacgtgccacgatggttgaagaattttgtgaggcaagtcactggaaatttcgtgccacgatgg 144  Q
    |||||||||||  |||| |||||||||||||| ||||||||| ||  | | ||||||||||| |||  ||||| ||||||||    
T  28462787 cgtgccacgattcagaagcaacgtgccacgattgttgaagaagttcctcaagcaagtcactgaaaaaatcgtgtcacgatgg 28462706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 35215934 - 35215889
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgag 273  Q
    |||||||||||||||||||||| ||||||||||  ||||| |||||    
T  35215934 atacttttactataaatatagaccttgtatcaggctaaactttgag 35215889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 174
Target Start/End: Complemental strand, 36559272 - 36559211
Alignment:
Q  113 ggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggc 174  Q
    |||||| |||||||||  ||||| |||||||||||| ||  |||||||||||||||| ||||    
T  36559272 ggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 36559211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 259
Target Start/End: Original strand, 45156922 - 45156999
Alignment:
Q  182 aacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatcttgtatca 259  Q
    ||||||||||||||||| ||    |||||| | |||||||| || ||| ||||||||||||||||||| ||| |||||    
T  45156922 aacataaacgtatttttaggcgtggatttgttccaaattttgagggatgcttttactataaatatagaccttatatca 45156999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 102
Target Start/End: Original strand, 45567096 - 45567137
Alignment:
Q  61 atcgtgccacgatggagaaacaacgtgccacgatggttgaag 102  Q
    ||||||||||||||||||| || || ||||||||||||||||    
T  45567096 atcgtgccacgatggagaagcatcgcgccacgatggttgaag 45567137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 74; Significance: 8e-34; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 120 - 273
Target Start/End: Original strand, 29003 - 29156
Alignment:
Q  120 cactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaat 219  Q
    |||||||||  ||||| |||||||||||| ||  |||||||||||||||| |||||||||| |||| |||| |||||||| || |||||||| | |||||    
T  29003 cactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggcagcgaaaaacagaaacatatttttgagtgcagatttgttacaaat 29102  T
Q  220 tttaagcgatacttttactataaatatagatcttgtatcagagtaaaccttgag 273  Q
    ||||||| | |||||||||||||||||||| ||||||||||  ||||| |||||    
T  29103 tttaagcaaaacttttactataaatatagaccttgtatcaggctaaactttgag 29156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 61; Significance: 4e-26; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 157 - 302
Target Start/End: Complemental strand, 69703 - 69555
Alignment:
Q  157 gcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatcttgta 256  Q
    ||||||||||| | |||||||||| |||| |||| |||||| |||| |||||||| | ||||||||||||||||||||||| ||||||||||| ||| ||    
T  69703 gcacgatggtgtgctggcagcgaaaaacagaaacatatttt-gggtgcagatttgttccaaattttaagcgatacttttacaataaatatagaccttata 69605  T
Q  257 tcagagtaaaccttgagc----tagagagggctgaaacaagggtatagaa 302  Q
    |||||| |||| |||||     ||||| |||||||||||||||| |||||    
T  69604 tcagagcaaactttgagagagatagagggggctgaaacaagggtttagaa 69555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 154 - 302
Target Start/End: Complemental strand, 73438 - 73287
Alignment:
Q  154 gtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttgcttcaaattttaagcgatacttttactataaatatagatctt 253  Q
    |||||||||||||| | |||||||||| |||| |||| |||||| |||| |||||||| | ||||||||||| ||||||||||||||||||||||| | |    
T  73438 gtggcacgatggtgtgctggcagcgaaaaacagaaacatatttt-gggtgcagatttgttccaaattttaagagatacttttactataaatatagaccgt 73340  T
Q  254 gtatcagagtaaaccttgagc----tagagagggctgaaacaagggtatagaa 302  Q
    |||||| || |||| |||||     ||||| |||||||||||||||| |||||    
T  73339 gtatcaaaggaaactttgagagagatagagggggctgaaacaagggtttagaa 73287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 69859 - 69811
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcag 49  Q
    |||||| ||||||| | |||||||||||| |||||||||||||||||||    
T  69859 actgatttgaagtcaaagtggagaattgtaagagttaacttaaaatcag 69811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 180 - 302
Target Start/End: Complemental strand, 16205 - 16082
Alignment:
Q  180 ataacataaacgtatttttgggtccagatttgcttcaaattt-taagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctaga 278  Q
    ||||||||| | ||||||||||   ||||||| | ||||||| | || |||||||||||||||||||||||| ||||||||||||||||||| || ||||    
T  16205 ataacataatcatatttttgggctgagatttgttccaaatttatgagggatacttttactataaatatagattttgtatcagagtaaaccttaagataga 16106  T
Q  279 gagggctgaaacaagggtatagaa 302  Q
    | ||| ||||| |||||| |||||    
T  16105 gggggttgaaataagggtttagaa 16082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1764 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold1764
Description:

Target: scaffold1764; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 1082 - 1183
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg 99  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||  |||||  | |||||||||||||||||||| || || |||||||| ||||    
T  1082 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagaaatctg-gagaatcgtgccacgatggagaagcatcgcgccacgattgttg 1180  T
Q  100 aag 102  Q
    |||    
T  1181 aag 1183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 187 - 302
Target Start/End: Original strand, 79768 - 79883
Alignment:
Q  187 aaacgtatttttgggtccagatttgcttcaaattt-taagcgatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggct 285  Q
    ||||||||||||||| || |||||  ||| ||||| | || ||| |||||||||||||||||| | ||||||||| |||||||||||| ||||| |||||    
T  79768 aaacgtatttttggg-cctgattttgttccaatttatgagggattcttttactataaatatagtttttgtatcagtgtaaaccttgagatagagggggct 79866  T
Q  286 gaaacaagggtatagaa 302  Q
    ||||||||||| |||||    
T  79867 gaaacaagggtttagaa 79883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 228 - 305
Target Start/End: Complemental strand, 11811 - 11734
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaatga 305  Q
    |||||||||||||||||||||| |||| |||||||||||||| ||| ||||| ||||||||||| || | ||||||||    
T  11811 atacttttactataaatatagaccttgaatcagagtaaacctggagatagagggggctgaaacagggatttagaatga 11734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 230 - 302
Target Start/End: Original strand, 6151 - 6223
Alignment:
Q  230 acttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||||||||||||| ||||||||| || |||| ||||| ||||| |||||||||||||||| |||||    
T  6151 acttttactataaatatagaccttgtatcaaagcaaactttgagatagagggggctgaaacaagggtttagaa 6223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 228 - 302
Target Start/End: Original strand, 79135 - 79209
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||| ||||||||||||||||| |||| ||||||||||| |||||| ||||| ||||| |||||||||| |||||    
T  79135 atacctttactataaatatagaccttgaatcagagtaaaacttgagatagagggggctaaaacaagggtttagaa 79209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0552 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 229 - 302
Target Start/End: Complemental strand, 1168 - 1095
Alignment:
Q  229 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||| |||||||||||||| |||||||||||| |||| ||||| ||||  |||||||||||||||| |||||    
T  1168 tactttcactataaatatagaccttgtatcagagcaaactttgagatagaaggggctgaaacaagggtttagaa 1095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0552; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 1349 - 1274
Alignment:
Q  27 tgtgagagttaacttaaaatcagga-tctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag 102  Q
    ||||||||||||||||||||||| | ||||  | ||||||||||||||| |||| |  ||||||||||| |||||||    
T  1349 tgtgagagttaacttaaaatcagaattctg-gagaatcgtgccacgatgtagaagcttcgtgccacgattgttgaag 1274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 3)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 24164 - 24213
Alignment:
Q  1 actgatgtgaagtcgaggtggagaattgtgagagttaacttaaaatcagg 50  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  24164 actgatttgaagtcaaggtggagaattgtgagagttaacttaaaatcagg 24213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 174
Target Start/End: Original strand, 22001 - 22062
Alignment:
Q  113 ggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggc 174  Q
    |||||| |||||||||  ||||| |||||||||||| ||  |||||||||||||||| ||||    
T  22001 ggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 22062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 174
Target Start/End: Original strand, 24276 - 24337
Alignment:
Q  113 ggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggc 174  Q
    |||||| |||||||||  ||||| |||||||||||| ||  |||||||||||||||| ||||    
T  24276 ggcaaggcactggaaaaatcgtggcacgatggggtcgcatcgtggcacgatggtgcgctggc 24337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 229 - 302
Target Start/End: Complemental strand, 41820 - 41747
Alignment:
Q  229 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||| |||||||||||||| |||||||||||| |||| | ||| ||||| |||||||||||||||| |||||    
T  41820 tactttcactataaatatagaccttgtatcagagcaaacttagagatagagggggctgaaacaagggtttagaa 41747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 42022 - 41950
Alignment:
Q  27 tgtgagagttaacttaaaatcaggat-ctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttg 99  Q
    ||||||||||||||||||||||| || ||| || |||||||||||||||||||| |  ||||||||||| ||||    
T  42022 tgtgagagttaacttaaaatcagaattctg-aagaatcgtgccacgatggagaagcttcgtgccacgattgttg 41950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 229 - 302
Target Start/End: Complemental strand, 183976 - 183904
Alignment:
Q  229 tacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||| |||||||||||||| ||||||||||||||||| ||||| |||| ||||||||||||| ||| |||||    
T  183976 tactttcactataaatatagaccttgtatcagagtaaactttgagataga-agggctgaaacaaaggtttagaa 183904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 304
Target Start/End: Original strand, 51959 - 52037
Alignment:
Q  228 atacttttactataaatatagatcttgtatcagagtaaacctt--gagctagagagggctgaaacaagggtatagaatg 304  Q
    |||||||||||||||||||||| ||||||||| | ||||| ||  ||| ||||| |||||||||||||||| |||||||    
T  51959 atacttttactataaatatagaccttgtatcatactaaactttgagagatagagggggctgaaacaagggtttagaatg 52037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 237 - 289
Target Start/End: Original strand, 4773 - 4825
Alignment:
Q  237 ctataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaa 289  Q
    ||||||||||||| ||||||||||||||||||||||| ||||| || ||||||    
T  4773 ctataaatatagaccttgtatcagagtaaaccttgagatagaggggtctgaaa 4825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 289
Target Start/End: Complemental strand, 16986 - 16924
Alignment:
Q  227 gatacttttactataaatatagatcttgtatcagagtaaaccttgagctagagagggctgaaa 289  Q
    |||| ||||| |||||||||| | ||||||||||||||||||||||| |||||  ||||||||    
T  16986 gataattttaatataaatataaaccttgtatcagagtaaaccttgagatagaggaggctgaaa 16924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 15976 - 16051
Alignment:
Q  27 tgtgagagttaacttaaaatcag-gatctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatggttgaag 102  Q
    |||||||||||||||||||||||  |||||  | |||||||||||||||||||| || || |||||||| |||||||    
T  15976 tgtgagagttaacttaaaatcagaaatctg-gagaatcgtgccacgatggagaagcatcgcgccacgattgttgaag 16051  T

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Target: scaffold0468 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 240 - 302
Target Start/End: Complemental strand, 1958 - 1895
Alignment:
Q  240 taaatatagatcttgtatcaga-gtaaaccttgagctagagagggctgaaacaagggtatagaa 302  Q
    |||||||||| ||||||||||| |||||||| ||| |||||  ||||||||||||||| |||||    
T  1958 taaatatagaccttgtatcagatgtaaacctagagatagaggtggctgaaacaagggtttagaa 1895  T

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Target: scaffold0127 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 12968 - 12871
Alignment:
Q  113 ggcaagtcactggaaatttcgtgccacgatggggtcacaaggtggcacgatggtgcgttggcagcgaataacataaacgtatttttgggtccagatttg 211  Q
    |||||| |||||||||  ||||| |||||||||||| ||  |||||||||||||||| |||| |  || || | |||||||||||||||  ||||||||    
T  12968 ggcaaggcactggaaaaatcgtggcacgatggggtctcatcgtggcacgatggtgcgctggcggataaaaata-aaacgtatttttgggagcagatttg 12871  T

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Target: scaffold0006 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 143
Target Start/End: Original strand, 224527 - 224609
Alignment:
Q  61 atcgtgccacgatggagaaacaacgtgccacgatggttgaagaattttgtgaggcaagtcactggaaatttcgtgccacgatg 143  Q
    ||||||||||||||||||| || || |||||||||||||||| |   |    || ||| ||||||||||||||||||||||||    
T  224527 atcgtgccacgatggagaagcatcgcgccacgatggttgaagcaagattcctgggaagacactggaaatttcgtgccacgatg 224609  T

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Target: scaffold0377 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0377
Description:

Target: scaffold0377; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 95
Target Start/End: Original strand, 16554 - 16597
Alignment:
Q  51 atctgcaaaaatcgtgccacgatggagaaacaacgtgccacgatg 95  Q
    ||||| ||||||||||||||||||||| | |||||||||||||||    
T  16554 atctggaaaaatcgtgccacgatggag-accaacgtgccacgatg 16597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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