View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0759_low_47 (Length: 351)

Name: NF0759_low_47
Description: NF0759
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0759_low_47
NF0759_low_47
[»] scaffold0225 (1 HSPs)
scaffold0225 (11-351)||(25336-25676)
[»] scaffold0162 (2 HSPs)
scaffold0162 (11-351)||(14850-15190)
scaffold0162 (11-351)||(11198-11538)
[»] chr8 (52 HSPs)
chr8 (11-351)||(16875559-16875899)
chr8 (11-351)||(21848801-21849141)
chr8 (11-351)||(20650819-20651159)
chr8 (11-351)||(22436280-22436620)
chr8 (11-351)||(23155506-23155844)
chr8 (11-351)||(21195004-21195343)
chr8 (28-351)||(23902141-23902464)
chr8 (109-339)||(20394695-20394925)
chr8 (113-339)||(22988719-22988945)
chr8 (107-339)||(31569402-31569634)
chr8 (54-340)||(24631173-24631459)
chr8 (37-117)||(16414302-16414382)
chr8 (109-339)||(22422454-22422684)
chr8 (178-339)||(22131672-22131833)
chr8 (67-337)||(23887015-23887289)
chr8 (169-339)||(20016885-20017055)
chr8 (107-339)||(20008481-20008713)
chr8 (107-326)||(21323839-21324057)
chr8 (169-339)||(18858566-18858736)
chr8 (109-339)||(23652030-23652260)
chr8 (169-338)||(17672645-17672814)
chr8 (109-266)||(22376015-22376172)
chr8 (202-326)||(23656929-23657053)
chr8 (107-305)||(21927450-21927649)
chr8 (268-351)||(22317158-22317241)
chr8 (217-339)||(19114679-19114801)
chr8 (172-338)||(19482689-19482855)
chr8 (107-339)||(19861424-19861656)
chr8 (187-339)||(21252933-21253085)
chr8 (212-339)||(15535372-15535499)
chr8 (136-287)||(20390140-20390291)
chr8 (212-339)||(30311809-30311936)
chr8 (169-339)||(22118797-22118967)
chr8 (169-339)||(22127581-22127751)
chr8 (27-203)||(19869818-19869994)
chr8 (187-339)||(21392501-21392653)
chr8 (187-339)||(21783060-21783212)
chr8 (187-339)||(21786995-21787147)
chr8 (187-339)||(21920388-21920540)
chr8 (178-339)||(32602133-32602295)
chr8 (172-339)||(22041816-22041983)
chr8 (109-339)||(19979956-19980186)
chr8 (109-339)||(22246995-22247225)
chr8 (107-305)||(22372954-22373152)
chr8 (107-260)||(28982979-28983132)
chr8 (107-260)||(28988198-28988351)
chr8 (169-305)||(16269846-16269982)
chr8 (202-326)||(22052865-22052989)
chr8 (235-339)||(29302114-29302218)
chr8 (181-339)||(19864727-19864886)
chr8 (107-305)||(6605681-6605879)
chr8 (88-305)||(4984065-4984282)
[»] chr7 (54 HSPs)
chr7 (11-351)||(7825800-7826140)
chr7 (11-351)||(27105804-27106144)
chr7 (11-351)||(27172181-27172521)
chr7 (11-351)||(4441828-4442168)
chr7 (11-351)||(17925550-17925890)
chr7 (11-351)||(13457935-13458275)
chr7 (25-351)||(15716947-15717273)
chr7 (25-333)||(17143320-17143628)
chr7 (11-167)||(13378969-13379123)
chr7 (67-339)||(48813338-48813609)
chr7 (256-351)||(14938246-14938341)
chr7 (256-351)||(15365839-15365934)
chr7 (107-339)||(19614588-19614820)
chr7 (170-339)||(11770430-11770599)
chr7 (107-339)||(14139592-14139824)
chr7 (181-339)||(12689414-12689572)
chr7 (107-320)||(11386533-11386746)
chr7 (178-339)||(11551299-11551460)
chr7 (107-339)||(19149124-19149356)
chr7 (107-339)||(20748523-20748755)
chr7 (107-340)||(14262349-14262581)
chr7 (178-339)||(14956466-14956627)
chr7 (107-339)||(23503974-23504206)
chr7 (107-326)||(12204904-12205123)
chr7 (169-339)||(11235401-11235571)
chr7 (107-329)||(13023280-13023502)
chr7 (169-339)||(14334308-14334478)
chr7 (169-339)||(15159245-15159415)
chr7 (107-319)||(13675385-13675597)
chr7 (124-340)||(15122170-15122384)
chr7 (107-339)||(15626437-15626669)
chr7 (107-339)||(18052057-18052289)
chr7 (173-339)||(8709517-8709683)
chr7 (181-339)||(15147085-15147243)
chr7 (169-338)||(44789539-44789708)
chr7 (190-337)||(15559-15706)
chr7 (169-339)||(16070461-16070631)
chr7 (107-320)||(16948576-16948789)
chr7 (159-339)||(10872602-10872782)
chr7 (107-326)||(15100707-15100926)
chr7 (107-329)||(26092902-26093124)
chr7 (181-266)||(14041680-14041765)
chr7 (181-266)||(14351710-14351795)
chr7 (25-237)||(39190-39402)
chr7 (107-329)||(11301317-11301539)
chr7 (107-305)||(13966772-13966970)
chr7 (107-305)||(26116694-26116892)
chr7 (107-329)||(49154224-49154446)
chr7 (169-266)||(13688026-13688123)
chr7 (169-326)||(14284542-14284699)
chr7 (178-305)||(12458587-12458714)
chr7 (220-326)||(15342357-15342463)
chr7 (283-339)||(8200540-8200596)
chr7 (169-245)||(18588359-18588435)
[»] chr6 (50 HSPs)
chr6 (11-351)||(16380539-16380879)
chr6 (11-351)||(16648135-16648475)
chr6 (11-351)||(1646980-1647320)
chr6 (11-351)||(23998023-23998363)
chr6 (11-351)||(14130244-14130584)
chr6 (11-351)||(16099784-16100130)
chr6 (11-351)||(23025912-23026231)
chr6 (194-351)||(18836257-18836414)
chr6 (234-351)||(18577984-18578101)
chr6 (234-351)||(19985805-19985922)
chr6 (256-351)||(16234803-16234898)
chr6 (256-351)||(21928979-21929074)
chr6 (180-339)||(22828690-22828849)
chr6 (107-339)||(19881085-19881317)
chr6 (127-339)||(34643868-34644080)
chr6 (169-338)||(2873127-2873296)
chr6 (124-337)||(23080258-23080471)
chr6 (179-339)||(18965629-18965789)
chr6 (107-326)||(14378178-14378397)
chr6 (107-326)||(14379728-14379947)
chr6 (67-254)||(23085993-23086180)
chr6 (169-340)||(24294106-24294277)
chr6 (25-178)||(14643667-14643817)
chr6 (161-339)||(18196049-18196227)
chr6 (107-320)||(18796496-18796709)
chr6 (172-339)||(16925965-16926132)
chr6 (188-337)||(22760798-22760947)
chr6 (67-339)||(18406166-18406438)
chr6 (187-339)||(20634282-20634434)
chr6 (178-338)||(28261530-28261690)
chr6 (178-338)||(28284226-28284386)
chr6 (178-338)||(28340279-28340439)
chr6 (179-338)||(25114340-25114499)
chr6 (172-339)||(27564160-27564327)
chr6 (169-339)||(5837543-5837713)
chr6 (169-326)||(19454824-19454981)
chr6 (155-339)||(19487582-19487766)
chr6 (187-339)||(25608203-25608355)
chr6 (172-339)||(16961809-16961976)
chr6 (107-305)||(24366233-24366431)
chr6 (107-329)||(28281075-28281297)
chr6 (107-326)||(25769644-25769863)
chr6 (82-339)||(18450290-18450547)
chr6 (169-329)||(10467173-10467333)
chr6 (169-320)||(15461142-15461293)
chr6 (169-339)||(19866474-19866644)
chr6 (212-338)||(27189224-27189350)
chr6 (212-338)||(27259890-27260016)
chr6 (212-320)||(19436808-19436916)
chr6 (212-287)||(5295573-5295648)
[»] chr3 (64 HSPs)
chr3 (11-351)||(30139346-30139686)
chr3 (11-351)||(30148897-30149237)
chr3 (11-351)||(8272659-8272999)
chr3 (11-351)||(15611643-15611983)
chr3 (11-351)||(13965612-13965953)
chr3 (11-351)||(6151113-6151453)
chr3 (11-351)||(25767858-25768198)
chr3 (11-317)||(15948730-15949036)
chr3 (199-338)||(6710865-6711004)
chr3 (256-351)||(12795776-12795871)
chr3 (260-351)||(16258683-16258774)
chr3 (107-339)||(14088225-14088457)
chr3 (256-351)||(18915266-18915361)
chr3 (256-350)||(55514237-55514331)
chr3 (107-339)||(13970465-13970697)
chr3 (107-326)||(11950253-11950472)
chr3 (109-339)||(15261172-15261402)
chr3 (169-339)||(15340811-15340981)
chr3 (169-339)||(15400935-15401105)
chr3 (107-326)||(17187939-17188158)
chr3 (118-339)||(41179074-41179295)
chr3 (159-339)||(20060462-20060642)
chr3 (169-339)||(13254232-13254402)
chr3 (169-338)||(15346663-15346832)
chr3 (202-326)||(12358967-12359091)
chr3 (107-254)||(11889636-11889783)
chr3 (124-339)||(15723307-15723522)
chr3 (173-339)||(16379339-16379505)
chr3 (280-350)||(18751484-18751554)
chr3 (178-339)||(6602278-6602439)
chr3 (178-339)||(10007142-10007303)
chr3 (178-339)||(16693706-16693867)
chr3 (107-339)||(13943576-13943808)
chr3 (67-339)||(15014072-15014344)
chr3 (187-339)||(17491392-17491544)
chr3 (212-326)||(12179903-12180017)
chr3 (178-339)||(10907752-10907913)
chr3 (107-296)||(15229198-15229387)
chr3 (107-296)||(15235066-15235255)
chr3 (190-339)||(16637315-16637464)
chr3 (202-339)||(16834950-16835087)
chr3 (190-339)||(48426989-48427138)
chr3 (178-338)||(5109038-5109198)
chr3 (178-338)||(12888252-12888412)
chr3 (187-339)||(14874935-14875087)
chr3 (159-339)||(15587800-15587980)
chr3 (107-339)||(44778799-44779031)
chr3 (107-329)||(11959514-11959736)
chr3 (169-339)||(16328067-16328237)
chr3 (107-329)||(28755880-28756102)
chr3 (172-338)||(53383439-53383605)
chr3 (223-340)||(16805419-16805536)
chr3 (178-338)||(3687486-3687646)
chr3 (173-257)||(55498486-55498570)
chr3 (179-338)||(5423358-5423517)
chr3 (169-320)||(10418452-10418603)
chr3 (107-326)||(31693530-31693749)
chr3 (190-339)||(12499790-12499939)
chr3 (169-338)||(16755119-16755288)
chr3 (169-305)||(10385257-10385393)
chr3 (88-320)||(13318828-13319060)
chr3 (256-350)||(13952283-13952377)
chr3 (107-260)||(47125575-47125728)
chr3 (183-252)||(55498665-55498734)
[»] chr1 (40 HSPs)
chr1 (11-351)||(20829485-20829825)
chr1 (11-339)||(20926992-20927320)
chr1 (11-350)||(41215949-41216288)
chr1 (33-350)||(21200994-21201311)
chr1 (11-182)||(20527148-20527319)
chr1 (19-125)||(22133857-22133963)
chr1 (169-340)||(51331744-51331915)
chr1 (107-305)||(21743741-21743939)
chr1 (169-339)||(21838888-21839058)
chr1 (178-339)||(19108306-19108467)
chr1 (169-338)||(33389280-33389449)
chr1 (11-80)||(35930918-35930987)
chr1 (169-339)||(21832240-21832410)
chr1 (172-305)||(20834154-20834287)
chr1 (172-339)||(430370-430537)
chr1 (124-339)||(20140021-20140236)
chr1 (169-339)||(20855011-20855181)
chr1 (65-339)||(21750878-21751152)
chr1 (172-338)||(41351916-41352082)
chr1 (202-339)||(41308611-41308748)
chr1 (178-338)||(16348856-16349016)
chr1 (161-337)||(21862616-21862792)
chr1 (181-339)||(21026111-21026269)
chr1 (107-329)||(31538186-31538408)
chr1 (107-329)||(48424852-48425074)
chr1 (107-329)||(52987720-52987942)
chr1 (178-339)||(17043275-17043436)
chr1 (166-339)||(50618646-50618819)
chr1 (187-339)||(24792885-24793037)
chr1 (212-339)||(21234025-21234152)
chr1 (172-329)||(24097857-24098014)
chr1 (107-260)||(37679097-37679250)
chr1 (172-320)||(19661390-19661538)
chr1 (202-326)||(20938347-20938471)
chr1 (187-339)||(22360513-22360665)
chr1 (181-337)||(22503552-22503708)
chr1 (172-326)||(19856256-19856410)
chr1 (212-326)||(23196543-23196657)
chr1 (169-339)||(38911077-38911247)
chr1 (322-351)||(22133961-22133990)
[»] scaffold0076 (3 HSPs)
scaffold0076 (11-351)||(42200-42540)
scaffold0076 (107-339)||(31797-32029)
scaffold0076 (172-326)||(55085-55239)
[»] chr5 (48 HSPs)
chr5 (11-351)||(21935391-21935731)
chr5 (11-351)||(24583035-24583375)
chr5 (11-351)||(23507509-23507849)
chr5 (256-351)||(23505069-23505164)
chr5 (67-339)||(20466358-20466630)
chr5 (82-339)||(21408992-21409246)
chr5 (109-339)||(23473082-23473312)
chr5 (107-339)||(17267633-17267865)
chr5 (181-337)||(22349776-22349932)
chr5 (107-339)||(21679077-21679309)
chr5 (169-338)||(40710636-40710805)
chr5 (169-320)||(22331248-22331399)
chr5 (169-339)||(14998100-14998270)
chr5 (169-339)||(37289857-37290027)
chr5 (169-337)||(19771817-19771985)
chr5 (49-180)||(20250525-20250656)
chr5 (124-339)||(25428288-25428503)
chr5 (172-339)||(27612209-27612376)
chr5 (169-339)||(22136523-22136693)
chr5 (172-338)||(27666854-27667020)
chr5 (190-339)||(16358357-16358506)
chr5 (190-339)||(34568349-34568498)
chr5 (212-339)||(18780969-18781096)
chr5 (169-323)||(20823306-20823460)
chr5 (169-339)||(22463788-22463958)
chr5 (109-339)||(26737028-26737258)
chr5 (169-339)||(27520261-27520431)
chr5 (169-339)||(29474434-29474604)
chr5 (169-339)||(41772697-41772867)
chr5 (109-266)||(21337595-21337752)
chr5 (187-339)||(20801252-20801404)
chr5 (169-320)||(27683761-27683912)
chr5 (107-329)||(14885290-14885512)
chr5 (107-340)||(22234219-22234452)
chr5 (220-329)||(22504526-22504635)
chr5 (169-305)||(20344153-20344289)
chr5 (169-339)||(28893303-28893473)
chr5 (169-339)||(28914774-28914944)
chr5 (169-339)||(28922129-28922299)
chr5 (169-339)||(28930042-28930212)
chr5 (107-260)||(24796696-24796849)
chr5 (240-332)||(20777757-20777849)
chr5 (217-305)||(24618704-24618792)
chr5 (217-305)||(24714935-24715023)
chr5 (217-305)||(24747963-24748051)
chr5 (169-329)||(25849922-25850082)
chr5 (107-329)||(37541680-37541902)
chr5 (107-260)||(21562323-21562476)
[»] chr4 (37 HSPs)
chr4 (11-351)||(15291179-15291519)
chr4 (36-351)||(12340911-12341226)
chr4 (256-351)||(14999226-14999321)
chr4 (67-340)||(14696035-14696308)
chr4 (256-351)||(9292746-9292841)
chr4 (107-339)||(15323140-15323372)
chr4 (107-339)||(51604909-51605141)
chr4 (64-340)||(8322850-8323126)
chr4 (67-305)||(8707868-8708106)
chr4 (178-339)||(14682490-14682651)
chr4 (124-339)||(40474963-40475178)
chr4 (169-339)||(8051542-8051712)
chr4 (169-339)||(14301898-14302068)
chr4 (169-339)||(23957670-23957840)
chr4 (107-298)||(15001482-15001673)
chr4 (109-339)||(14849225-14849455)
chr4 (107-329)||(15072292-15072514)
chr4 (169-339)||(27713259-27713429)
chr4 (178-339)||(12478523-12478684)
chr4 (178-339)||(19776721-19776882)
chr4 (107-329)||(3262911-3263133)
chr4 (212-338)||(8388336-8388462)
chr4 (107-339)||(1647394-1647626)
chr4 (107-299)||(44659983-44660175)
chr4 (67-237)||(18547696-18547866)
chr4 (187-339)||(15145822-15145974)
chr4 (169-305)||(16149668-16149804)
chr4 (169-305)||(16153814-16153950)
chr4 (172-320)||(27902328-27902476)
chr4 (202-305)||(15357332-15357435)
chr4 (212-339)||(18225408-18225535)
chr4 (169-266)||(17093068-17093165)
chr4 (178-266)||(16234920-16235008)
chr4 (212-308)||(18613786-18613882)
chr4 (107-339)||(29451654-29451886)
chr4 (217-266)||(16353474-16353523)
chr4 (283-339)||(29037437-29037493)
[»] chr2 (44 HSPs)
chr2 (11-351)||(24829749-24830089)
chr2 (38-351)||(22279647-22279960)
chr2 (11-351)||(24568229-24568569)
chr2 (11-351)||(22760130-22760470)
chr2 (11-350)||(25130152-25130491)
chr2 (25-335)||(10037907-10038217)
chr2 (25-335)||(10098292-10098602)
chr2 (256-351)||(12639039-12639134)
chr2 (82-339)||(30010816-30011073)
chr2 (178-339)||(21143769-21143930)
chr2 (107-340)||(23112289-23112522)
chr2 (107-339)||(27789294-27789526)
chr2 (181-339)||(24875481-24875639)
chr2 (67-339)||(24818847-24819119)
chr2 (82-320)||(30209549-30209787)
chr2 (107-320)||(23098675-23098888)
chr2 (124-339)||(27372823-27373038)
chr2 (169-340)||(41607104-41607275)
chr2 (169-339)||(24711588-24711758)
chr2 (169-320)||(23295508-23295659)
chr2 (187-318)||(24950165-24950296)
chr2 (107-320)||(23278349-23278562)
chr2 (169-338)||(27219571-27219740)
chr2 (190-338)||(16926915-16927063)
chr2 (190-338)||(17000555-17000703)
chr2 (172-339)||(23106450-23106617)
chr2 (169-339)||(24263924-24264094)
chr2 (190-339)||(9485770-9485919)
chr2 (169-338)||(10870405-10870574)
chr2 (107-339)||(12575907-12576139)
chr2 (187-339)||(22734511-22734663)
chr2 (172-320)||(27208894-27209042)
chr2 (178-338)||(44384298-44384458)
chr2 (107-329)||(1065315-1065537)
chr2 (181-339)||(24706213-24706371)
chr2 (178-339)||(23189473-23189633)
chr2 (212-320)||(22323618-22323726)
chr2 (202-326)||(25264621-25264745)
chr2 (223-339)||(45534494-45534610)
chr2 (167-339)||(23073417-23073589)
chr2 (181-339)||(21323997-21324155)
chr2 (181-339)||(24677043-24677201)
chr2 (169-266)||(9337209-9337306)
chr2 (221-305)||(19717788-19717872)
[»] scaffold0124 (2 HSPs)
scaffold0124 (11-351)||(5830-6172)
scaffold0124 (212-326)||(14167-14281)
[»] scaffold0302 (2 HSPs)
scaffold0302 (11-351)||(7095-7435)
scaffold0302 (11-351)||(153-493)
[»] scaffold0077 (3 HSPs)
scaffold0077 (11-347)||(26290-26626)
scaffold0077 (172-290)||(19819-19937)
scaffold0077 (256-301)||(25270-25315)
[»] scaffold0218 (2 HSPs)
scaffold0218 (11-351)||(1976-2316)
scaffold0218 (15-351)||(26270-26605)
[»] scaffold0170 (1 HSPs)
scaffold0170 (11-351)||(34027-34367)
[»] scaffold0022 (4 HSPs)
scaffold0022 (11-351)||(8850-9190)
scaffold0022 (166-339)||(55709-55882)
scaffold0022 (214-337)||(40588-40711)
scaffold0022 (214-337)||(74308-74431)
[»] scaffold0266 (2 HSPs)
scaffold0266 (11-351)||(7885-8225)
scaffold0266 (107-326)||(16079-16298)
[»] scaffold0120 (2 HSPs)
scaffold0120 (11-351)||(24118-24458)
scaffold0120 (124-339)||(7974-8189)
[»] scaffold0610 (1 HSPs)
scaffold0610 (11-351)||(6953-7293)
[»] scaffold0008 (4 HSPs)
scaffold0008 (11-351)||(132513-132853)
scaffold0008 (177-351)||(25768-25942)
scaffold0008 (11-122)||(25938-26049)
scaffold0008 (208-338)||(85451-85581)
[»] scaffold1488 (1 HSPs)
scaffold1488 (11-351)||(827-1166)
[»] scaffold0876 (2 HSPs)
scaffold0876 (11-351)||(970-1310)
scaffold0876 (256-351)||(4476-4571)
[»] scaffold0387 (1 HSPs)
scaffold0387 (11-351)||(16000-16340)
[»] scaffold0692 (1 HSPs)
scaffold0692 (11-351)||(1908-2239)
[»] scaffold0021 (3 HSPs)
scaffold0021 (11-351)||(31447-31786)
scaffold0021 (69-351)||(7156-7438)
scaffold0021 (11-306)||(21871-22165)
[»] scaffold0561 (1 HSPs)
scaffold0561 (11-347)||(7029-7361)
[»] scaffold0092 (1 HSPs)
scaffold0092 (25-297)||(103-375)
[»] scaffold0467 (1 HSPs)
scaffold0467 (11-254)||(1645-1888)
[»] scaffold0635 (1 HSPs)
scaffold0635 (34-335)||(8853-9154)
[»] scaffold0369 (1 HSPs)
scaffold0369 (11-149)||(6888-7026)
[»] scaffold0244 (2 HSPs)
scaffold0244 (234-351)||(25024-25141)
scaffold0244 (220-326)||(19319-19425)
[»] scaffold0269 (1 HSPs)
scaffold0269 (234-351)||(2206-2323)
[»] scaffold0462 (1 HSPs)
scaffold0462 (11-115)||(2117-2221)
[»] scaffold0083 (1 HSPs)
scaffold0083 (67-339)||(9114-9386)
[»] scaffold1486 (1 HSPs)
scaffold1486 (255-351)||(116-212)
[»] scaffold0023 (3 HSPs)
scaffold0023 (255-351)||(54210-54306)
scaffold0023 (118-340)||(2636-2858)
scaffold0023 (208-339)||(151064-151195)
[»] scaffold0730 (1 HSPs)
scaffold0730 (107-339)||(121-353)
[»] scaffold0029 (2 HSPs)
scaffold0029 (107-339)||(114513-114745)
scaffold0029 (178-339)||(108002-108163)
[»] scaffold0310 (1 HSPs)
scaffold0310 (256-351)||(13093-13188)
[»] scaffold0074 (1 HSPs)
scaffold0074 (76-339)||(5066-5328)
[»] scaffold0058 (3 HSPs)
scaffold0058 (76-339)||(27337-27599)
scaffold0058 (145-350)||(76366-76571)
scaffold0058 (28-86)||(76630-76688)
[»] scaffold0011 (4 HSPs)
scaffold0011 (109-340)||(24655-24886)
scaffold0011 (280-351)||(181866-181937)
scaffold0011 (187-305)||(150557-150675)
scaffold0011 (236-326)||(193953-194043)
[»] scaffold0647 (2 HSPs)
scaffold0647 (82-339)||(2853-3110)
scaffold0647 (187-339)||(7859-8011)
[»] scaffold0037 (1 HSPs)
scaffold0037 (178-339)||(115172-115333)
[»] scaffold0028 (6 HSPs)
scaffold0028 (107-339)||(48634-48866)
scaffold0028 (181-340)||(16889-17048)
scaffold0028 (181-340)||(10427-10586)
scaffold0028 (178-338)||(45106-45266)
scaffold0028 (306-351)||(104892-104937)
scaffold0028 (271-310)||(94054-94093)
[»] scaffold0007 (2 HSPs)
scaffold0007 (124-330)||(84656-84862)
scaffold0007 (172-339)||(268562-268729)
[»] scaffold0445 (1 HSPs)
scaffold0445 (107-339)||(1969-2201)
[»] scaffold0293 (1 HSPs)
scaffold0293 (118-338)||(14423-14643)
[»] scaffold0379 (1 HSPs)
scaffold0379 (112-339)||(6014-6241)
[»] scaffold0335 (1 HSPs)
scaffold0335 (256-351)||(10979-11074)
[»] scaffold0080 (3 HSPs)
scaffold0080 (172-339)||(11424-11591)
scaffold0080 (187-339)||(50044-50196)
scaffold0080 (187-266)||(53662-53741)
[»] scaffold0001 (3 HSPs)
scaffold0001 (109-332)||(494979-495202)
scaffold0001 (67-305)||(453293-453531)
scaffold0001 (229-329)||(515595-515695)
[»] scaffold0585 (1 HSPs)
scaffold0585 (107-305)||(5209-5407)
[»] scaffold0102 (3 HSPs)
scaffold0102 (256-350)||(46682-46776)
scaffold0102 (67-305)||(41685-41922)
scaffold0102 (169-266)||(51527-51624)
[»] scaffold1602 (1 HSPs)
scaffold1602 (67-339)||(147-419)
[»] scaffold0018 (2 HSPs)
scaffold0018 (67-339)||(10821-11093)
scaffold0018 (67-339)||(17013-17285)
[»] scaffold0079 (2 HSPs)
scaffold0079 (107-326)||(2683-2902)
scaffold0079 (217-308)||(35481-35572)
[»] scaffold0431 (1 HSPs)
scaffold0431 (181-339)||(9320-9478)
[»] scaffold0149 (2 HSPs)
scaffold0149 (124-326)||(5487-5689)
scaffold0149 (124-326)||(9918-10120)
[»] scaffold0016 (1 HSPs)
scaffold0016 (107-305)||(176464-176662)
[»] scaffold0010 (3 HSPs)
scaffold0010 (113-339)||(3868-4094)
scaffold0010 (107-329)||(40453-40675)
scaffold0010 (217-326)||(45630-45738)
[»] scaffold0040 (1 HSPs)
scaffold0040 (109-294)||(16876-17061)
[»] scaffold0006 (1 HSPs)
scaffold0006 (67-339)||(103187-103459)
[»] scaffold1830 (1 HSPs)
scaffold1830 (108-339)||(948-1179)
[»] scaffold0122 (1 HSPs)
scaffold0122 (124-339)||(38085-38300)
[»] scaffold2004 (1 HSPs)
scaffold2004 (169-339)||(991-1161)
[»] scaffold0509 (1 HSPs)
scaffold0509 (109-339)||(10782-11012)
[»] scaffold0454 (1 HSPs)
scaffold0454 (169-339)||(8892-9062)
[»] scaffold0342 (1 HSPs)
scaffold0342 (109-339)||(15343-15573)
[»] scaffold0282 (1 HSPs)
scaffold0282 (109-339)||(14601-14831)
[»] scaffold0190 (1 HSPs)
scaffold0190 (107-329)||(31439-31661)
[»] scaffold0138 (1 HSPs)
scaffold0138 (109-339)||(7209-7439)
[»] scaffold0108 (1 HSPs)
scaffold0108 (107-305)||(49092-49290)
[»] scaffold0054 (1 HSPs)
scaffold0054 (112-326)||(64633-64847)
[»] scaffold0042 (2 HSPs)
scaffold0042 (111-337)||(22661-22887)
scaffold0042 (181-339)||(38014-38172)
[»] scaffold0404 (1 HSPs)
scaffold0404 (169-326)||(6717-6874)
[»] scaffold0309 (2 HSPs)
scaffold0309 (107-307)||(11779-11979)
scaffold0309 (172-339)||(16595-16762)
[»] scaffold0206 (1 HSPs)
scaffold0206 (172-320)||(25086-25234)
[»] scaffold0126 (1 HSPs)
scaffold0126 (169-305)||(42905-43041)
[»] scaffold0090 (2 HSPs)
scaffold0090 (107-339)||(20803-21035)
scaffold0090 (107-339)||(24965-25197)
[»] scaffold0621 (1 HSPs)
scaffold0621 (124-339)||(3386-3601)
[»] scaffold0304 (1 HSPs)
scaffold0304 (107-326)||(1605-1824)
[»] scaffold0034 (2 HSPs)
scaffold0034 (202-305)||(3168-3271)
scaffold0034 (172-320)||(69343-69491)
[»] scaffold0719 (1 HSPs)
scaffold0719 (37-95)||(4785-4843)
[»] scaffold0575 (1 HSPs)
scaffold0575 (161-339)||(3535-3713)
[»] scaffold0523 (1 HSPs)
scaffold0523 (107-305)||(1857-2055)
[»] scaffold0222 (1 HSPs)
scaffold0222 (202-320)||(9034-9152)
[»] scaffold0026 (2 HSPs)
scaffold0026 (107-296)||(50807-50996)
scaffold0026 (187-339)||(30899-31051)
[»] scaffold0004 (2 HSPs)
scaffold0004 (67-260)||(201548-201741)
scaffold0004 (202-326)||(324671-324795)
[»] scaffold0239 (1 HSPs)
scaffold0239 (187-339)||(10986-11138)
[»] scaffold0017 (1 HSPs)
scaffold0017 (159-339)||(195659-195839)
[»] scaffold0476 (1 HSPs)
scaffold0476 (107-326)||(1665-1884)
[»] scaffold0312 (1 HSPs)
scaffold0312 (172-339)||(13-180)
[»] scaffold0298 (1 HSPs)
scaffold0298 (172-339)||(10242-10409)
[»] scaffold0104 (2 HSPs)
scaffold0104 (107-326)||(24181-24400)
scaffold0104 (107-326)||(44537-44756)
[»] scaffold0072 (1 HSPs)
scaffold0072 (169-320)||(53018-53169)
[»] scaffold1423 (1 HSPs)
scaffold1423 (181-339)||(1576-1734)
[»] scaffold0331 (1 HSPs)
scaffold0331 (67-325)||(16058-16315)
[»] scaffold0270 (2 HSPs)
scaffold0270 (109-266)||(5898-6055)
scaffold0270 (109-266)||(13028-13185)
[»] scaffold0148 (1 HSPs)
scaffold0148 (82-339)||(951-1208)
[»] scaffold0130 (2 HSPs)
scaffold0130 (190-339)||(44846-44995)
scaffold0130 (107-305)||(8928-9126)
[»] scaffold0109 (1 HSPs)
scaffold0109 (178-339)||(40107-40268)
[»] scaffold0100 (1 HSPs)
scaffold0100 (107-320)||(22305-22518)
[»] scaffold0049 (1 HSPs)
scaffold0049 (107-296)||(49995-50184)
[»] scaffold0319 (1 HSPs)
scaffold0319 (59-339)||(720-1000)
[»] scaffold0908 (1 HSPs)
scaffold0908 (124-337)||(916-1126)
[»] scaffold0261 (2 HSPs)
scaffold0261 (107-326)||(21635-21854)
scaffold0261 (107-326)||(13456-13675)
[»] scaffold0256 (1 HSPs)
scaffold0256 (212-339)||(23299-23426)
[»] scaffold0203 (1 HSPs)
scaffold0203 (169-320)||(12481-12632)
[»] scaffold0192 (1 HSPs)
scaffold0192 (67-326)||(28492-28751)
[»] scaffold0067 (4 HSPs)
scaffold0067 (172-299)||(50365-50492)
scaffold0067 (172-299)||(59399-59526)
scaffold0067 (172-299)||(65787-65914)
scaffold0067 (107-305)||(28610-28808)
[»] scaffold0751 (1 HSPs)
scaffold0751 (107-305)||(4164-4362)
[»] scaffold0540 (1 HSPs)
scaffold0540 (187-332)||(6531-6676)
[»] scaffold0324 (1 HSPs)
scaffold0324 (186-339)||(13410-13563)
[»] scaffold0180 (3 HSPs)
scaffold0180 (169-326)||(422-579)
scaffold0180 (169-326)||(4742-4899)
scaffold0180 (187-339)||(33953-34105)
[»] scaffold0089 (2 HSPs)
scaffold0089 (169-326)||(458-615)
scaffold0089 (107-299)||(14833-15025)
[»] scaffold0403 (1 HSPs)
scaffold0403 (124-340)||(8325-8541)
[»] scaffold0139 (1 HSPs)
scaffold0139 (202-326)||(37615-37739)
[»] scaffold0084 (1 HSPs)
scaffold0084 (187-339)||(7175-7327)
[»] scaffold0044 (2 HSPs)
scaffold0044 (190-338)||(16113-16261)
scaffold0044 (172-338)||(2375-2542)
[»] scaffold0035 (2 HSPs)
scaffold0035 (82-330)||(42202-42450)
scaffold0035 (202-326)||(4716-4840)
[»] scaffold1373 (1 HSPs)
scaffold1373 (220-339)||(1067-1186)
[»] scaffold0865 (1 HSPs)
scaffold0865 (107-326)||(2392-2611)
[»] scaffold0348 (1 HSPs)
scaffold0348 (172-339)||(10074-10241)
[»] scaffold0333 (1 HSPs)
scaffold0333 (212-339)||(17608-17735)
[»] scaffold0133 (1 HSPs)
scaffold0133 (107-326)||(29405-29624)
[»] scaffold0358 (2 HSPs)
scaffold0358 (181-339)||(8003-8161)
scaffold0358 (181-339)||(17199-17357)
[»] scaffold0081 (2 HSPs)
scaffold0081 (169-339)||(20556-20726)
scaffold0081 (169-339)||(35980-36150)
[»] scaffold0031 (1 HSPs)
scaffold0031 (169-339)||(109584-109754)
[»] scaffold0012 (1 HSPs)
scaffold0012 (109-339)||(217542-217772)
[»] scaffold1477 (1 HSPs)
scaffold1477 (212-305)||(215-308)
[»] scaffold1288 (1 HSPs)
scaffold1288 (217-326)||(1084-1193)
[»] scaffold0235 (2 HSPs)
scaffold0235 (232-305)||(9702-9775)
scaffold0235 (232-305)||(19916-19989)
[»] scaffold0215 (2 HSPs)
scaffold0215 (190-339)||(28774-28923)
scaffold0215 (161-266)||(28637-28742)
[»] scaffold0056 (1 HSPs)
scaffold0056 (190-339)||(3556-3705)
[»] scaffold0046 (1 HSPs)
scaffold0046 (169-326)||(80013-80170)
[»] scaffold0020 (1 HSPs)
scaffold0020 (107-320)||(99682-99895)
[»] scaffold1646 (1 HSPs)
scaffold1646 (107-339)||(1278-1510)
[»] scaffold0501 (1 HSPs)
scaffold0501 (217-337)||(4150-4270)
[»] scaffold0228 (1 HSPs)
scaffold0228 (187-331)||(20200-20344)
[»] scaffold0420 (1 HSPs)
scaffold0420 (169-304)||(634-769)
[»] scaffold0086 (1 HSPs)
scaffold0086 (268-327)||(34682-34741)
[»] scaffold0771 (1 HSPs)
scaffold0771 (256-350)||(4423-4517)
[»] scaffold0465 (1 HSPs)
scaffold0465 (11-69)||(13649-13707)
[»] scaffold0156 (1 HSPs)
scaffold0156 (240-326)||(36080-36166)
[»] scaffold0053 (1 HSPs)
scaffold0053 (202-320)||(56062-56180)
[»] scaffold0005 (1 HSPs)
scaffold0005 (220-326)||(262191-262297)
[»] scaffold0003 (1 HSPs)
scaffold0003 (220-326)||(195207-195313)
[»] scaffold0297 (1 HSPs)
scaffold0297 (190-339)||(7896-8045)
[»] scaffold0213 (1 HSPs)
scaffold0213 (238-339)||(4587-4688)
[»] scaffold2111 (1 HSPs)
scaffold2111 (107-339)||(707-939)
[»] scaffold0739 (1 HSPs)
scaffold0739 (187-339)||(1006-1158)
[»] scaffold0009 (1 HSPs)
scaffold0009 (169-329)||(250584-250744)
[»] scaffold0278 (1 HSPs)
scaffold0278 (188-339)||(405-555)
[»] scaffold0106 (1 HSPs)
scaffold0106 (172-299)||(33328-33455)
[»] scaffold0088 (1 HSPs)
scaffold0088 (219-305)||(28921-29007)
[»] scaffold0827 (1 HSPs)
scaffold0827 (67-140)||(5259-5332)
[»] scaffold0682 (1 HSPs)
scaffold0682 (240-320)||(1856-1936)


Alignment Details
Target: scaffold0225 (Bit Score: 321; Significance: 0; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 11 - 351
Target Start/End: Complemental strand, 25676 - 25336
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25676 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 25577  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25576 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 25477  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25476 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 25377  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  25376 aagtgagtttccttggtcatgtgatttctaagggtggtatt 25336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 321; Significance: 0; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 11 - 351
Target Start/End: Complemental strand, 15190 - 14850
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15190 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 15091  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15090 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 14991  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14990 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 14891  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  14890 aagtgagtttccttggtcatgtgatttctaagggtggtatt 14850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 11 - 351
Target Start/End: Original strand, 11198 - 11538
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| ||||||||||| |||||||||||||| || |||||||| |||||||||||||||||||||||| |||||||||||||||| |||||    
T  11198 atcatcagattagagtgaaggcggaagatatatccaaaaccgcattccgaacaaggtatggacactatgagtattctttgatgccatttggagtgtctaa 11297  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  11298 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaag 11397  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||    
T  11398 tctgaggaagagcataatgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgcaaagttatataagtgtgagttttggttgaagg 11497  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  11498 aagtgagtttccttggtcaagtgatttctaagggtggtatt 11538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 321; Significance: 0; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 11 - 351
Target Start/End: Original strand, 16875559 - 16875899
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16875559 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 16875658  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16875659 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 16875758  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16875759 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 16875858  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  16875859 aagtgagtttccttggtcatgtgatttctaagggtggtatt 16875899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 11 - 351
Target Start/End: Original strand, 21848801 - 21849141
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  21848801 atcatcagattagagtaaaggcgaaagatatatccaaaactgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaa 21848900  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21848901 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 21849000  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  21849001 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgggagttttggttgaagg 21849100  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  21849101 aagtgagttttcttggtcatgtgatttctaagggtggtatt 21849141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 11 - 351
Target Start/End: Original strand, 20650819 - 20651159
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||| ||||| || ||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20650819 atcatcaaattagagtaaaggcagaagatatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 20650918  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    ||||||||||||||| || || || ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||     
T  20650919 tgcgccaggtgtcttcatagagtatatgaatagaatattttatccttatctggaccgttttgtagtggtgttcatagatgatattttggtgtattcgaaa 20651018  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||| ||||||||||||    
T  20651019 tctgaggaggagcatgccgagcatttgaggattgtgttgcaagtcttgaaggagaaccagttatgtgctaagttgtctaagtgtgagatttggttgaagg 20651118  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  20651119 aagtgagtttccttggtcatgtgatttctaagggtggtatt 20651159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 11 - 351
Target Start/End: Complemental strand, 22436620 - 22436280
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||| ||||| ||||| ||||| |||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||    
T  22436620 atcatcatattagagtgaaagcggaagatatatccaaaaccgcgttccgaacaaggtatggacagtatgagtattctgtgatgccatttggagtatccaa 22436521  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||    
T  22436520 tgcgccaggtgtcttaatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaag 22436421  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    ||||||||  |||||||||||||||||||||| ||||||| |||||| || ||||| ||||| ||||| |||||||||||||||||||||||||||  ||    
T  22436420 tctgaggagaagcatgctgagcatttgaggatagtgttgcgagtcttaaaggagaatcagttatgtgctaagttgtctaagtgtgagttttggttgtggg 22436321  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  22436320 aagtgagtttccttggtcatgtgatttctaagggtggtatt 22436280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 11 - 351
Target Start/End: Original strand, 23155506 - 23155844
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||| | | ||    
T  23155506 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacact--gagtattctgtgatgccatttggagcacccaa 23155603  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    ||||| ||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||| |||||||| |||    
T  23155604 tgcgctaggtgtcttcatggaatatatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttattgatgatattttagtgtattcgaag 23155703  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    |||||||| || |||| |||||||||||||||||||||| |||||||||| || || ||||| ||||| |||||||||||||||||||||||||||||||    
T  23155704 tctgaggaggatcatgttgagcatttgaggattgtgttgtaagtcttgaaggataatcagttatgtgctaagttgtctaagtgtgagttttggttgaagg 23155803  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||||||||| |||||||||||||||||| |||||||    
T  23155804 aagtgagtttccttagtcatgtgatttctaaggatggtatt 23155844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 11 - 351
Target Start/End: Original strand, 21195004 - 21195343
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||| | ||| ||||||||||| |||||||||||||| | ||||||||| |||||||||||||||||||||| |||||||| ||||||||||| |||    
T  21195004 atcatcataatagagtgaaggcggaagatatatccaaaaccgtgttccgaacaaggtatggacactatgagtattttgtgatgcaatttggagtatataa 21195103  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    || |||||||  ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||| ||     
T  21195104 tgtgccaggta-cttcatggaatatatgaatagaatatttcatccttatctggaccgttttgtggtggtatttatagatgctattttggtgtattcgaaa 21195202  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| |||||||||||| |||||||||||||| |||    
T  21195203 tctgaggaggagcatgctgagcatttgaggattgtgttgcaagtattgaaggagaaccagttatgtgctaagttgtctaagagtgagttttggttgcagg 21195302  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||| |||||||||||||||||||||||| |||||||||||    
T  21195303 aagtaagtttccttggtcatgtgatttctcagggtggtatt 21195343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 28 - 351
Target Start/End: Complemental strand, 23902464 - 23902141
Alignment:
Q  28 aaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtcttta 127  Q
    |||| ||| |||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||| |    
T  23902464 aaggtggaagatatatccaaaaccgcgttccaaacgaggcatggacactatgagtattctgtgatgccatttggagtatccaatgcactaggtgtcttca 23902365  T
Q  128 tggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgc 227  Q
    ||||||| |||||||||||||||||||||| ||||||||||||| |||| ||||| || |||||||||||||||||||| |||| |||||| ||||||||    
T  23902364 tggaatatatgaatagaatatttcatccttttctggaccgttttatggtagtgtttatcgatgatattttggtgtattcgaagtttgaggaggagcatgc 23902265  T
Q  228 tgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggt 327  Q
    |||||||||||||||| ||||||  |||||||| || ||  |||||||||| |||| ||| ||||| ||| ||||||||   ||||||||||||||||||    
T  23902264 tgagcatttgaggattatgttgcgtgtcttgaaggaaaattagttgtgtgctaagtggtcgaagtgcgagctttggttgcgagaagtgagtttccttggt 23902165  T
Q  328 catgtgatttctaagggtggtatt 351  Q
    ||||||||||||||||||||||||    
T  23902164 catgtgatttctaagggtggtatt 23902141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 109 - 339
Target Start/End: Original strand, 20394695 - 20394925
Alignment:
Q  109 aatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 208  Q
    ||||| || ||||| ||||||||||| |||||| | || |||||| ||||| | || || ||||| || |||||||| || ||||||||| | || || |    
T  20394695 aatgcaccgggtgtatttatggaatacatgaatcgtatttttcatgcttatttagatcgctttgttgttgtgttcattgacgatattttgatatactcta 20394794  T
Q  209 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaa 308  Q
    ||||||| ||||| ||||| |||||||||| |||||| ||||||||  ||||||||||  |||| | |||||||||||| |||||||| || ||||||||    
T  20394795 agtctgaagaagaacatgccgagcatttgaagattgttttgcaagtgctgaaagagaaaaagttatatgccaagttgtcaaagtgtgaattctggttgaa 20394894  T
Q  309 ggaagtgagtttccttggtcatgtgatttct 339  Q
      | |||||||| ||||| ||| | ||||||    
T  20394895 taaggtgagttttcttggccatattatttct 20394925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 113 - 339
Target Start/End: Complemental strand, 22988945 - 22988719
Alignment:
Q  113 cgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtc 212  Q
    ||||| |||| ||||||||||| ||||||   || |||||| | | | |||| ||||| ||||| |||||||| |||||||||||| | ||||| ||| |    
T  22988945 cgccacgtgtgtttatggaatacatgaatcacatttttcatgcatttttggatcgtttcgtggttgtgttcatcgatgatattttgatatattccaagac 22988846  T
Q  213 tgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaa 312  Q
    ||| ||||| |||||||||||||||| |||||| ||||||||  ||||||||||  || | | ||| || ||||| |||||||| || |||||||| ||     
T  22988845 tgaagaagaacatgctgagcatttgaagattgttttgcaagtgctgaaagagaagaagctttatgctaaattgtcaaagtgtgaattctggttgaaagag 22988746  T
Q  313 gtgagtttccttggtcatgtgatttct 339  Q
    |||||||| ||||| ||||| ||||||    
T  22988745 gtgagttttcttggccatgttatttct 22988719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 107 - 339
Target Start/End: Original strand, 31569402 - 31569634
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||| ||||| ||||| || ||||| || |||||| |||| |||||| ||| ||||||    || |||||||| || || ||||||||| || | |||||    
T  31569402 ctaacgcgcccggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattctgatttattc 31569501  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     ||| |||| ||||||||||| || ||| |||| |||||| ||||||| |||||||||||  |||||| |||||| ||||| || |||||||||||| |     
T  31569502 gaagactgaagaagagcatgcagaacatctgagaattgtgctgcaagttttgaaagagaagaagttgtatgccaaattgtcgaaatgtgagttttggcta 31569601  T
Q  307 aaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  ||||||||||||||||||||| | ||||||    
T  31569602 agtgaagtgagtttccttggtcatattatttct 31569634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 54 - 340
Target Start/End: Original strand, 24631173 - 24631459
Alignment:
Q  54 gttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaatgaatagaatatttcat 153  Q
    |||| |||| |||||| | ||||||||||||||||| ||| ||||||| ||  |||||| || |||  | ||||||||||| |||||||  ||||| |||    
T  24631173 gttctgaactaggtatagtcactatgagtattctgtaatgtcatttggtgtgactaatgtgctaggattatttatggaatacatgaatatgatattccat 24631272  T
Q  154 ccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaag 253  Q
      ||||  ||| |  | |||||| ||||||||||| ||||| ||||||| ||| ||||| ||||| |||||||| |||||| ||| ||| |||| |||      
T  24631273 tattattgggatcagtgtgtggttgtgttcatagacgatatcttggtgtcttcgaagtcggaggaggagcatgcagagcatctgatgatcgtgtcgcaga 24631372  T
Q  254 tcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttcta 340  Q
     |||||| |||||  | |||| ||||| ||||| |||||||||||||||||||    ||||||| ||||||  ||||||||| ||||    
T  24631373 ccttgaaggagaagaaattgtatgccatgttgtttaagtgtgagttttggttgtgataagtgagcttccttaatcatgtgatatcta 24631459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 16414382 - 16414302
Alignment:
Q  37 gatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 117  Q
    |||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  16414382 gatatatccaaaaccgcattccgaacaaggtatggacactatgagtattctgtgatgccatttggaatatccaatgcgcca 16414302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 109 - 339
Target Start/End: Original strand, 22422454 - 22422684
Alignment:
Q  109 aatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 208  Q
    |||||||||||||| |||||||| || |||||| | || |||||| | | | |||| ||||| ||||| || ||||| |||||||||||| | || || |    
T  22422454 aatgcgccaggtgtgtttatggagtacatgaatcgcatttttcatgcatttttggatcgtttcgtggttgtattcattgatgatattttgatttactcca 22422553  T
Q  209 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaa 308  Q
    |||| || ||||| |||| ||| ||||||| |||||| |||||||| |||||||||||  |  | | ||| || || || |||||||| || ||||||||    
T  22422554 agtccgaagaagaacatgttgaacatttgaagattgttttgcaagtgttgaaagagaagaaactttatgctaaattatcaaagtgtgaattatggttgaa 22422653  T
Q  309 ggaagtgagtttccttggtcatgtgatttct 339  Q
     || |||||||||||||| ||||| ||||||    
T  22422654 agaggtgagtttccttggccatgttatttct 22422684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 178 - 339
Target Start/End: Original strand, 22131672 - 22131833
Alignment:
Q  178 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 277  Q
    ||||| || |||||||||||| | || || ||| |||| ||||| |||||||||||||||| |||||| |||||||| |||||||||||  |  | | ||    
T  22131672 gtgtttatcgatgatattttgatctactccaagactgaagaagaacatgctgagcatttgaagattgtcttgcaagtgttgaaagagaagaaactttatg 22131771  T
Q  278 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    | || |||||||||||||| || |||||||||||||| ||||| ||||| ||||| ||||||    
T  22131772 ctaaattgtctaagtgtgaattctggttgaaggaagtaagttttcttggccatgttatttct 22131833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 67 - 337
Target Start/End: Complemental strand, 23887289 - 23887015
Alignment:
Q  67 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggacc 166  Q
    |||||||| || |||||||| |||||||| || || ||  |||||||||||| ||| |||||||| || ||||||   || |||||| ||||| | || |    
T  23887289 tatggacattacgagtattcagtgatgcctttcggtgttactaatgcgccagatgtgtttatggagtacatgaatcatatttttcatgcttatttagatc 23887190  T
Q  167 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgc----tgagcatttgaggattgtgttgcaagtcttgaaag 262  Q
    | || ||||| |||||||| |||||||||||| | || || |||||| | ||||| ||||     ||||||||||| |||||| ||||||||  |||| |    
T  23887189 gcttcgtggttgtgttcatcgatgatattttgatatactctaagtctaaagaagaacatgtatgttgagcatttgaagattgttttgcaagtgctgaagg 23887090  T
Q  263 agaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgattt 337  Q
    ||||  |||| | |||||||||||| |||||||| || | |||||| || |||||||| ||||| ||||| ||||    
T  23887089 agaagaagttatatgccaagttgtcaaagtgtgaattctagttgaatgaggtgagttttcttggccatgttattt 23887015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 169 - 339
Target Start/End: Original strand, 20016885 - 20017055
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||      
T  20016885 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 20016984  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  | | |||||| |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  20016985 aactttatgccaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 20017055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 107 - 339
Target Start/End: Original strand, 20008481 - 20008713
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || ||||| ||||| || ||| ||||||||||    |||||||| ||||| |  ||||||||  |  | |||||    
T  20008481 ctaatgcgcctggtgtgtttatggagtatatgaacagaattttccatgcttatctggataaatttgtggttgtgtttagtgatgatatcctaatttattc 20008580  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     |||  ||| ||||||||||| |||||| ||| ||||||||||||| | |||||||| ||  |||||| |||||||||||| || ||||| ||||||||     
T  20008581 taagaatgaagaagagcatgcagagcatatgaagattgtgttgcaactgttgaaagaaaagaagttgtatgccaagttgtccaaatgtgaattttggtta 20008680  T
Q  307 aaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  ||||| ||||| ||||| ||| | ||||||    
T  20008681 agtgaagtaagttttcttggccatattatttct 20008713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 107 - 326
Target Start/End: Original strand, 21323839 - 21324057
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| || ||||| || |||||  |||| || ||| |||| |||||    || ||||| ||||| || ||||| ||| || | |||||    
T  21323839 ctaatgcgcctggtgtgttcatggagtatatgaaccgaattttccatgcttacctggataaattcgtggttgtgtttatcgatgacattctgatctattc 21323938  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
    |||| |||| ||||||||||| || ||| ||| ||||||||||||| | |||||||||||  |||||| ||| |||||||| ||||||||||| |||||     
T  21323939 aaagactgaagaagagcatgcagaacatctgaagattgtgttgcaaattttgaaagagaa-aagttgtatgctaagttgtcgaagtgtgagttctggtta 21324037  T
Q  307 aaggaagtgagtttccttgg 326  Q
    |  ||||||||||| |||||    
T  21324038 agtgaagtgagttttcttgg 21324057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 169 - 339
Target Start/End: Complemental strand, 18858736 - 18858566
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || || || |||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||      
T  18858736 tttgtggttgtgtttatcgacgacattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 18858637  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  | | ||| || |||||||||||||| || |||||||| ||||||||||| ||||| ||||| ||||||    
T  18858636 aactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttcttggccatgttatttct 18858566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 109 - 339
Target Start/End: Complemental strand, 23652260 - 23652030
Alignment:
Q  109 aatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 208  Q
    ||||| || ||||| |||||||| || |||||| | || |||||| | | | |||| || || ||||| || ||||| ||||||| |||| | || || |    
T  23652260 aatgcacctggtgtgtttatggagtacatgaatcgcatctttcatgcatttttggatcggttcgtggttgttttcattgatgatactttgatttactcca 23652161  T
Q  209 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaa 308  Q
    || |||| || || |||||||||||||||| |||||| || ||||| |||||||||||  || | | ||| || |||||||||||||| |||||||||||    
T  23652160 agactgaagaggaacatgctgagcatttgaagattgttttacaagtgttgaaagagaagaagctatatgctaaattgtctaagtgtgaattttggttgaa 23652061  T
Q  309 ggaagtgagtttccttggtcatgtgatttct 339  Q
     || || ||||| ||||| ||||| ||||||    
T  23652060 agaggtaagttttcttggccatgtcatttct 23652030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 169 - 338
Target Start/End: Original strand, 17672645 - 17672814
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||      
T  17672645 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 17672744  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 338  Q
    |  | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| |||||    
T  17672745 aactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttc 17672814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 109 - 266
Target Start/End: Original strand, 22376015 - 22376172
Alignment:
Q  109 aatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 208  Q
    ||||| |||||||| |||||||| || |||||| | || |||||| | | | |||| ||||||||||| |||||||| || ||||||||  | || || |    
T  22376015 aatgcaccaggtgtgtttatggagtacatgaatcgtatttttcatgcatttttggatcgttttgtggttgtgttcatcgacgatatttttatatactcca 22376114  T
Q  209 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
    || |||| ||||| |||||||||||||||| |||||| ||||||||  ||||||||||    
T  22376115 agactgaagaagaacatgctgagcatttgaagattgttttgcaagtgctgaaagagaa 22376172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 202 - 326
Target Start/End: Complemental strand, 23657053 - 23656929
Alignment:
Q  202 tattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtttt 301  Q
    ||||| ||| |||| ||||||||||| || ||| ||| |||||| |||||||| |||||||||||  |||||| |||||||||||| ||||||||||| |    
T  23657053 tattctaagactgaagaagagcatgcagaacatctgaagattgtattgcaagtattgaaagagaagaagttgtatgccaagttgtcaaagtgtgagttat 23656954  T
Q  302 ggttgaaggaagtgagtttccttgg 326  Q
    |||| |  ||||| ||||| |||||    
T  23656953 ggttaagtgaagtaagttttcttgg 23656929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 107 - 305
Target Start/End: Complemental strand, 21927649 - 21927450
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || ||||| ||||| || ||| ||||||||||    |||||||| ||||| || ||||| || ||  | |||||    
T  21927649 ctaatgcgcctggtgtgtttatggagtatatgaacagaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttaatttattc 21927550  T
Q  207 aaagtctgaggaagagcat-gctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggtt 305  Q
     ||| |||| ||||||||| || |||||| ||| |||||| |||||||| |||||||| ||  |||||| |||||||||||| || ||||| || |||||    
T  21927549 taagactgaagaagagcattgcagagcatctgaagattgtattgcaagtgttgaaagaaaagaagttgtatgccaagttgtcaaaatgtgaattctggtt 21927450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 268 - 351
Target Start/End: Complemental strand, 22317241 - 22317158
Alignment:
Q  268 cagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    ||||| ||||| |||||||| ||||||||||||||||||  | ||||  ||||||||||| |||||||||||||||||||||||    
T  22317241 cagttatgtgctaagttgtcgaagtgtgagttttggttgcggaaagttggtttccttggtaatgtgatttctaagggtggtatt 22317158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 217 - 339
Target Start/End: Complemental strand, 19114801 - 19114679
Alignment:
Q  217 gaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtga 316  Q
    ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  || | | ||| || |||||||||||||| || |||||||| |||||||    
T  19114801 gaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtga 19114702  T
Q  317 gtttccttggtcatgtgatttct 339  Q
    |||| || || ||||| ||||||    
T  19114701 gttttctaggccatgttatttct 19114679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 172 - 338
Target Start/End: Original strand, 19482689 - 19482855
Alignment:
Q  172 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 271  Q
    ||||| |||||||| || ||||||||| | || || ||| |||| ||||| ||||| || ||| ||| |||||| || ||||| |||||||||||  |      
T  19482689 gtggttgtgttcatcgacgatattttgatttactccaagactgaagaagaacatgcagaacatctgaagattgtcttacaagtgttgaaagagaagaaac 19482788  T
Q  272 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 338  Q
    | | ||| || |||||||||||||| || |||||||| ||||||||||| ||||||||||| |||||    
T  19482789 tttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttcttggtcatgttatttc 19482855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 107 - 339
Target Start/End: Complemental strand, 19861656 - 19861424
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||| | || ||||| ||||| || ||| ||||||||||    |||||||| ||||| || ||||||||  |  | |||||    
T  19861656 ctaatgcgcctggtgtgtttatgaagtatatgaacagaattttccatgcttatctggataaatttgtggttgtgtttattgatgatatcctaatttattc 19861557  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     |||  ||| ||||| ||||| |||||| ||| ||||| ||||||||| |||||| | ||  |||||| |||||||||||| || ||||| ||||||||     
T  19861556 taagaatgaagaagaacatgcagagcatctgaagattgagttgcaagtgttgaaataaaagaagttgtatgccaagttgtccaaatgtgaattttggtta 19861457  T
Q  307 aaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  ||||| ||||| ||||| ||| | ||||||    
T  19861456 agtgaagtaagttttcttggccatattatttct 19861424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 339
Target Start/End: Complemental strand, 21253085 - 21252933
Alignment:
Q  187 gatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 286  Q
    |||||||||||| | || || |||||||| ||||| |||||||||||||||| | | ||  ||||||| |||||||||||  || | | ||| || ||||    
T  21253085 gatgatattttgatttactccaagtctgaagaagaacatgctgagcatttgaagctggttctgcaagtattgaaagagaagaagctttatgcgaaattgt 21252986  T
Q  287 ctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    ||||||| || || |||||||| |||||||| || ||||| ||||| ||||||    
T  21252985 ctaagtgagaattctggttgaaagaagtgagctttcttggacatgttatttct 21252933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 212 - 339
Target Start/End: Complemental strand, 15535499 - 15535372
Alignment:
Q  212 ctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagga 311  Q
    |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||| || |||||||||||||| || |||||||| ||    
T  15535499 ctgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaaga 15535400  T
Q  312 agtgagtttccttggtcatgtgatttct 339  Q
    ||| ||||| ||||| ||||| ||||||    
T  15535399 agtaagttttcttggccatgttatttct 15535372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 136 - 287
Target Start/End: Complemental strand, 20390291 - 20390140
Alignment:
Q  136 atgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatt 235  Q
    ||||||||||| || ||| |||   |||| || |||||||| ||||| || ||||| || ||| | ||||| ||| |||| ||||||||||| |||||||    
T  20390291 atgaatagaattttccatgctttcttggatcggtttgtggttgtgtttattgatgacatcttgatttattctaagactgaagaagagcatgcggagcatt 20390192  T
Q  236 tgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtc 287  Q
    | | ||||||||||||||| ||||| || ||  |||||| ||||||||||||    
T  20390191 taaagattgtgttgcaagtgttgaaggaaaaaaagttgtatgccaagttgtc 20390140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 212 - 339
Target Start/End: Original strand, 30311809 - 30311936
Alignment:
Q  212 ctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagga 311  Q
    |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||| || |||||||||||||| || |||||||| ||    
T  30311809 ctgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaaga 30311908  T
Q  312 agtgagtttccttggtcatgtgatttct 339  Q
    ||| ||||| ||||| ||||| ||||||    
T  30311909 agtaagttttcttggccatgttatttct 30311936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 339
Target Start/End: Original strand, 22118797 - 22118967
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| | |||||||||| ||| |||||| |||||||| |||||||||||      
T  22118797 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacgtgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 22118896  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    || | | ||| || |||||||||||||| || |||| ||| || |||||||| || || ||||| ||||||    
T  22118897 agctttatgctaaattgtctaagtgtgaattctggtcgaaagaggtgagttttctaggccatgttatttct 22118967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 339
Target Start/End: Original strand, 22127581 - 22127751
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| | |||||||||| ||| |||||| |||||||| |||||||||||      
T  22127581 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacgtgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 22127680  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    || | | ||| || |||||||||||||| || |||| ||| || |||||||| || || ||||| ||||||    
T  22127681 agctttatgctaaattgtctaagtgtgaattctggtcgaaagaggtgagttttctaggccatgttatttct 22127751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 203
Target Start/End: Complemental strand, 19869994 - 19869818
Alignment:
Q  27 gaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtcttt 126  Q
    |||| |||| |||||||| || ||||| ||| ||||  | ||||| || ||||||||||| |||||||| |||||||| || || |||||||| || |||    
T  19869994 gaagtcggaagatatatcgaagactgccttcagaacccgttatggtcattatgagtattcagtgatgccttttggagtgtccaacgcgccaggagtgttt 19869895  T
Q  127 atggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgta 203  Q
    ||||| || ||||| ||||| || ||||| ||| | || |  || || || || ||||| |||||||||||||||||    
T  19869894 atggagtatatgaacagaattttccatccgtatttagatcagttcgttgtagtattcattgatgatattttggtgta 19869818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 187 - 339
Target Start/End: Original strand, 21392501 - 21392653
Alignment:
Q  187 gatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 286  Q
    |||||||| ||| | || || |||||||| ||||| |||| ||||||||||| | | || |||||||| |||||||||||  || | | ||| || ||||    
T  21392501 gatgatatattgatttactccaagtctgaagaagaacatgttgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcaaaattgt 21392600  T
Q  287 ctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    ||||||| || || |||||||| |||||||| || ||||| ||||| ||||||    
T  21392601 ctaagtgcgaattctggttgaaagaagtgagctttcttggacatgttatttct 21392653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 187 - 339
Target Start/End: Original strand, 21783060 - 21783212
Alignment:
Q  187 gatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 286  Q
    |||||||| ||| | || || |||||||| ||||| |||| ||||||||||| | | || |||||||| |||||||||||  || | | ||| || ||||    
T  21783060 gatgatatattgatttactccaagtctgaagaagaacatgttgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgctaaattgt 21783159  T
Q  287 ctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    ||||||| || || |||||||| |||||||| || ||||| ||||| ||||||    
T  21783160 ctaagtgcgaattctggttgaaagaagtgagctttcttggacatgttatttct 21783212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 187 - 339
Target Start/End: Original strand, 21786995 - 21787147
Alignment:
Q  187 gatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 286  Q
    |||||||| ||| | || || |||||||| ||||| |||| ||||||||||| | | || |||||||| |||||||||||  || | | ||| || ||||    
T  21786995 gatgatatattgatttactccaagtctgaagaagaacatgttgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcaaaattgt 21787094  T
Q  287 ctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    ||||||| || || |||||||| |||||||| || ||||| ||||| ||||||    
T  21787095 ctaagtgcgaattctggttgaaagaagtgagctttcttggacatgttatttct 21787147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 187 - 339
Target Start/End: Original strand, 21920388 - 21920540
Alignment:
Q  187 gatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 286  Q
    |||||||||||| | || |  ||| |||| |||||  ||||||||||||||| | | || |||||||| |||||||||||  |  | | ||| || ||||    
T  21920388 gatgatattttgatttacttcaagactgaagaagaatatgctgagcatttgaagttagttttgcaagtgttgaaagagaagaaactttatgcgaaattgt 21920487  T
Q  287 ctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    ||||||||||||| |||||||| |||||||| || ||||| ||||| ||||||    
T  21920488 ctaagtgtgagttctggttgaaagaagtgagctttcttggacatgttatttct 21920540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 339
Target Start/End: Complemental strand, 32602295 - 32602133
Alignment:
Q  178 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 277  Q
    ||||| || |||||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||    
T  32602295 gtgtttatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatg 32602196  T
Q  278 ccaagttgtctaagtgtgagtt-ttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    | || ||||| |||||||| || ||||||||| ||||| |||||  |||| ||||| ||||||    
T  32602195 ctaaattgtcaaagtgtgaattcttggttgaaagaagtaagtttttttggccatgttatttct 32602133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 339
Target Start/End: Complemental strand, 22041983 - 22041816
Alignment:
Q  172 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 271  Q
    ||||| ||||| || || ||||||||| |||| || ||| |||| ||||| |||||||||||| ||| |||||| |||||||  |||||||||||  |      
T  22041983 gtggttgtgtttatcgacgatattttgatgtactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagcgttgaaagagaagaaac 22041884  T
Q  272 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    | | ||| || || |||||||| || || |||||||| ||| | ||||| ||||| ||||| ||||||    
T  22041883 tttatgctaaattatctaagtgagaattctggttgaaagaaataagttttcttggccatgttatttct 22041816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 339
Target Start/End: Complemental strand, 19980186 - 19979956
Alignment:
Q  109 aatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 208  Q
    |||||||| || || |||||||| || |||||| | || |||||| | | | |||| || || ||||| || || || || ||||||||| | || || |    
T  19980186 aatgcgcctggagtgtttatggagtacatgaatcgcatctttcatgcatttttggatcggttcgtggttgtttttatcgacgatattttgatttactcca 19980087  T
Q  209 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaa 308  Q
    || |||| ||||| ||||||||| || ||| |||||| |||||||| |||||||||||  | || | ||| || || ||||||| ||| || ||||||||    
T  19980086 agactgaagaagaacatgctgagaatctgaagattgtcttgcaagtgttgaaagagaagaaattttatgctaaattatctaagtatgatttctggttgaa 19979987  T
Q  309 ggaagtgagtttccttggtcatgtgatttct 339  Q
     || || ||||| ||||| ||||| ||||||    
T  19979986 agaggtaagttttcttggccatgttatttct 19979956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 339
Target Start/End: Original strand, 22246995 - 22247225
Alignment:
Q  109 aatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 208  Q
    |||||||||||||| |||||||| || |||||| | || |||| | | | | |||| |||||  |||| |||||||| || ||||||||| | || || |    
T  22246995 aatgcgccaggtgtgtttatggagtacatgaatcgtatttttcctgcgtttttggatcgtttcatggttgtgttcatcgacgatattttgatatactcca 22247094  T
Q  209 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaa 308  Q
    ||  ||| | ||| |||| ||||||||||  |||||| ||||||||  ||||||||||  |||| | ||| || || || |||||||| || ||||||||    
T  22247095 agattgaaggagaacatgttgagcatttgtagattgttttgcaagtgctgaaagagaagaagttatatgctaaattttcaaagtgtgaattctggttgaa 22247194  T
Q  309 ggaagtgagtttccttggtcatgtgatttct 339  Q
     || | |||||| | ||| ||||| ||||||    
T  22247195 agaggcgagttttcatggccatgttatttct 22247225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 305
Target Start/End: Complemental strand, 22373152 - 22372954
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| || ||||| || |||||| |||| || ||| ||||||||||    |||||||| ||||| |  ||||||||  |  | |||||    
T  22373152 ctaatgcgcctggtgtgttcatggagtacatgaattgaattttccatgcttatctggataaatttgtggttgtgtttactgatgatatcctaatttattc 22373053  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggtt 305  Q
     |||  ||| ||||| ||||| |||||| | | ||||||||||||||| |||||||| ||  |||||| |||||||| ||| || ||||| || |||||    
T  22373052 taagaatgaagaagaccatgcagagcatcttaagattgtgttgcaagtgttgaaagaaaagaagttgtatgccaagtggtccaaatgtgaattatggtt 22372954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 107 - 260
Target Start/End: Complemental strand, 28983132 - 28982979
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || |||||  |||| || ||| ||| ||||||    ||||||||||| || || ||||||||| |  | |||||    
T  28983132 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgtggtggtatttattgatgatattctaatctattc 28983033  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 260  Q
     |||  |||||| |||||||| |||||| |||| || ||||||||||| |||||    
T  28983032 caagaatgaggaggagcatgcagagcatctgagaatagtgttgcaagtgttgaa 28982979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 107 - 260
Target Start/End: Complemental strand, 28988351 - 28988198
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || |||||  |||| || ||| ||| ||||||    ||||||||||| || || ||||||||| |  | |||||    
T  28988351 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgtggtggtatttattgatgatattctaatctattc 28988252  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 260  Q
     |||  |||||| |||||||| |||||| |||| || ||||||||||| |||||    
T  28988251 caagaatgaggaggagcatgcagagcatctgagaatagtgttgcaagtgttgaa 28988198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 305
Target Start/End: Original strand, 16269846 - 16269982
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    ||||| ||||||||||| |||||||| ||| | ||||| |||  ||| || |||||||| |||||  |||| ||||| |||||||| ||||| || ||      
T  16269846 tttgttgtggtgttcattgatgatatcttgatttattccaagaatgaagaggagcatgcagagcacctgagaattgtattgcaagtgttgaaggaaaaga 16269945  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggtt 305  Q
     ||||| ||| |||||||| || |||||||| |||||    
T  16269946 ggttgtatgcaaagttgtcaaaatgtgagttctggtt 16269982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 326
Target Start/End: Complemental strand, 22052989 - 22052865
Alignment:
Q  202 tattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtttt 301  Q
    ||||| ||| |||| || |||||||| || ||| |||||||||| ||||||||  ||||||||||  |||||| ||| |||||||  || ||||| || |    
T  22052989 tattctaagactgaagaggagcatgcagaacatctgaggattgtattgcaagtactgaaagagaaaaagttgtatgctaagttgttgaaatgtgaattct 22052890  T
Q  302 ggttgaaggaagtgagtttccttgg 326  Q
    |||| |  ||||||||||| |||||    
T  22052889 ggttaagtgaagtgagttttcttgg 22052865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 339
Target Start/End: Original strand, 29302114 - 29302218
Alignment:
Q  235 ttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtga 334  Q
    |||| ||||||||| ||||| ||||||||||   |||||| |||||||||||| || ||||| || |||||||  ||||| ||||| ||||| || || |    
T  29302114 ttgaagattgtgttacaagtgttgaaagagaggaagttgtatgccaagttgtcaaaatgtgaattctggttgagtgaagtaagttttcttggccacgtta 29302213  T
Q  335 tttct 339  Q
    |||||    
T  29302214 tttct 29302218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 181 - 339
Target Start/End: Original strand, 19864727 - 19864886
Alignment:
Q  181 ttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttg-caagtcttgaaagagaaccagttgtgtgcc 279  Q
    ||||| |||||||||||| | || || |||||||| ||||| |||  |||||||||||   | || ||  ||||| |||||||||||  || | | |||     
T  19864727 ttcattgatgatattttgatttactctaagtctgaagaagaacatattgagcatttgaaactggtttttacaagtgttgaaagagaagaagctttatgcg 19864826  T
Q  280 aagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    || ||||||||||| || || |||||||| ||||||||||| ||||| ||||| ||||||    
T  19864827 aaattgtctaagtgcgaattctggttgaaagaagtgagttttcttggacatgttatttct 19864886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 305
Target Start/End: Complemental strand, 6605879 - 6605681
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || |||||  |||| || ||| ||| ||||||    ||||| ||||| || || |||||||||||  | |||||    
T  6605879 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtatttattgatgatattttaatctattc 6605780  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggtt 305  Q
     |||  |||||| |||||||| |||||| |||| ||||| ||||| || ||||| || ||   ||||| ||| ||||| || || |||||||| |||||    
T  6605779 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaggtgttgaaggaaaagaggttgtatgctaagttatcaaaatgtgagttctggtt 6605681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 305
Target Start/End: Complemental strand, 4984282 - 4984065
Alignment:
Q  88 gtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatag 187  Q
    |||||||| || || ||| |||| ||||| ||||| |||||||| || |||||| |||| || ||| ||| ||| ||    ||||| |||||||||||      
T  4984282 gtgatgcctttcggtgtaactaaagcgcctggtgtttttatggagtacatgaatcgaatcttccatgcttttctagataagtttgttgtggtgttcatta 4984183  T
Q  188 atgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtc 287  Q
    ||||||  ||| | ||||| |||   |||||||||||||| |||||| |||| || || |||||||| || || ||||| |  |||| ||  ||||||||    
T  4984182 atgataccttgatttattccaagaacgaggaagagcatgcagagcatctgagaatagtattgcaagtgttaaaggagaagcgattgtatgttaagttgtc 4984083  T
Q  288 taagtgtgagttttggtt 305  Q
     || |||||||| |||||    
T  4984082 aaaatgtgagttctggtt 4984065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 321; Significance: 0; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 11 - 351
Target Start/End: Complemental strand, 7826140 - 7825800
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7826140 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 7826041  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7826040 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 7825941  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7825940 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 7825841  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  7825840 aagtgagtttccttggtcatgtgatttctaagggtggtatt 7825800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 11 - 351
Target Start/End: Original strand, 27105804 - 27106144
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27105804 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 27105903  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27105904 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 27106003  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27106004 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 27106103  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  27106104 aagtgagtttccttggtcatgtgatttctaagggtggtatt 27106144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 11 - 351
Target Start/End: Complemental strand, 27172521 - 27172181
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27172521 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 27172422  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27172421 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 27172322  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27172321 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 27172222  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  27172221 aagtgagtttccttggtcatgtgatttctaagggtggtatt 27172181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 11 - 351
Target Start/End: Complemental strand, 4442168 - 4441828
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||||| |||||||||||||| ||||||||  ||||||||| |||||| |||||||||||||||||||| |||||||| ||    
T  4442168 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccggtcgaggtatgaacactaagagtattctgtgatgccattcggagtatccaa 4442069  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    ||||||||||||||| |||||||| ||||||| |||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||    
T  4442068 tgcgccaggtgtcttcatggaatatatgaatataatattccatccttttctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaag 4441969  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    |||| ||| |||||||  |||||||||||||| ||||||| ||||||||| || || | ||| ||||| |||||||| ||||||||||||||||||  ||    
T  4441968 tctggggaggagcatgtcgagcatttgaggatggtgttgcgagtcttgaaggaaaatcggttatgtgctaagttgtcgaagtgtgagttttggttgcggg 4441869  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  4441868 aagtgagtttccttggtcatgtgatttctaagggtggtatt 4441828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 11 - 351
Target Start/End: Complemental strand, 17925890 - 17925550
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| |||||| |||| |||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  17925890 atcatcagattagagtgaagacggaagatatatccaaaaccgcgtttcgaatgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 17925791  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||| ||| |||||||||||||||||||| |||||| |||||||||| |||||||||    
T  17925790 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatccttttctagaccgttttgtggtggtgtttatagattatattttggtatattcaaag 17925691  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    |||  ||| ||||||| || |||||| || ||||||||||  |||||||| ||||| ||||| ||||| ||||||||||||||||| |||||||||   |    
T  17925690 tctagggaggagcatgttgtgcatttaagaattgtgttgcgcgtcttgaaggagaatcagttatgtgctaagttgtctaagtgtgaattttggttgcgtg 17925591  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  17925590 aagtgagtttccttggtcatgtgatttcgaagggtggtatt 17925550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 11 - 351
Target Start/End: Complemental strand, 13458275 - 13457935
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||| ||||||| ||||||||| | ||||||||| |||| | ||||||||| |||||||||||||||||||||| ||||||| ||||||||||||| ||    
T  13458275 atcattagattagagtgaaggcgaaagatatatccgaaaccgtgttccgaacaaggtatggacactatgagtattttgtgatgtcatttggagtatccaa 13458176  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    ||||||||||||||| |||||||| |||||||||| ||| ||||||| || ||| ||||||||||||||||| || |||||||||||||||||||| | |    
T  13458175 tgcgccaggtgtcttcatggaatatatgaatagaacattccatccttttcaggatcgttttgtggtggtgtttatcgatgatattttggtgtattcgagg 13458076  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    || ||||| ||| |||||||||||||||||||||||||||  |||||||||||||| || || ||||| |||||||||||||||||||||||||||  ||    
T  13458075 tcagaggaggagtatgctgagcatttgaggattgtgttgcgtgtcttgaaagagaatcatttatgtgctaagttgtctaagtgtgagttttggttgcggg 13457976  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    ||||||||||||||| |||||||||||| |||| |||||||    
T  13457975 aagtgagtttccttgatcatgtgatttcgaaggatggtatt 13457935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 25 - 351
Target Start/End: Original strand, 15716947 - 15717273
Alignment:
Q  25 gtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtct 124  Q
    |||||||||||||||||||||||||||||||||||||| || ||||| |||||||| |||||||| |||||||||||  || |||||| |||  ||||||    
T  15716947 gtgaaggcggaggatatatccaaaactgcgttccgaactagatatggtcactatgaatattctgtaatgccatttggtctaactaatgtgcctagtgtct 15717046  T
Q  125 ttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagca 224  Q
    | |||||||| |||||||||||||| ||||||| ||||||||  ||| |||| ||||| ||||| ||||| ||||| ||||||| ||| ||||| |||||    
T  15717047 tcatggaatatatgaatagaatattccatccttttctggaccagtttttggtagtgtttatagacgatatcttggtttattcaatgtcggaggaggagca 15717146  T
Q  225 tgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttcctt 324  Q
    |||||| ||||| ||||  ||||||||   |||||| |||||  |||||| ||| || ||||| |||||||||||||| ||| ||||||||||||| |||    
T  15717147 tgctgaacattttaggaccgtgttgcagaccttgaaggagaagaagttgtttgctaatttgtcgaagtgtgagttttgattgcaggaagtgagttttctt 15717246  T
Q  325 ggtcatgtgatttctaagggtggtatt 351  Q
    |||||||||||||| ||||| ||||||    
T  15717247 ggtcatgtgatttcaaagggcggtatt 15717273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 25 - 333
Target Start/End: Original strand, 17143320 - 17143628
Alignment:
Q  25 gtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtct 124  Q
    ||||||||| |||| ||||| || ||||| ||  |||||||||||||||||||||| ||||||| |||| ||||||| ||  ||||| |||| |||||||    
T  17143320 gtgaaggcgaaggacatatctaagactgcattttgaacgaggtatggacactatgaatattctgcgatgtcatttggtgtgactaatacgcccggtgtct 17143419  T
Q  125 ttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagca 224  Q
    | |||||||| ||||||||||| || ||||||||| |||| |  |||||||||||||| ||||| ||||| ||||||||||| ||||| ||||| || ||    
T  17143420 tcatggaatatatgaatagaatcttccatccttatttggatcagtttgtggtggtgtttatagacgatatcttggtgtattcgaagtcagaggaggatca 17143519  T
Q  225 tgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttcctt 324  Q
    ||| |||||| |||||||||||||||     ||||| |||||  |||||| ||  |||||||| ||||||||||||||||||   |||| ||||||||||    
T  17143520 tgcggagcatatgaggattgtgttgcgtacgttgaaggagaagaagttgtttgataagttgtcgaagtgtgagttttggttgcgtgaagggagtttcctt 17143619  T
Q  325 ggtcatgtg 333  Q
    |||||||||    
T  17143620 ggtcatgtg 17143628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 13379123 - 13378969
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    |||||||||| || ||||||||||| |||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||    
T  13379123 atcatcagatcagagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacact--gagtattctgtgatgccatttggagtatccaa 13379026  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccg 167  Q
    ||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||    
T  13379025 tgcgccaggtgtcttcatgaaatatatgaatagaatatttcatccttatctggaccg 13378969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 67 - 339
Target Start/End: Original strand, 48813338 - 48813609
Alignment:
Q  67 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggacc 166  Q
    |||||||| || || ||||| |||||||| || || ||  ||||||||||| |||| |||||||| || |||||| | || |||||| ||||| | || |    
T  48813338 tatggacattacgaatattcagtgatgcctttcggtgttactaatgcgccaagtgtgtttatggagtacatgaattgtatttttcatgcttatttagatc 48813437  T
Q  167 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
    | || ||||| |||||||| |||||||||||| | || || |||||||| ||||| |||||||||||||||| |||||||||||||||  |||| |||||    
T  48813438 gcttcgtggttgtgttcattgatgatattttgatatactctaagtctgaagaagaacatgctgagcatttgaagattgtgttgcaagtgctgaaggagaa 48813537  T
Q  267 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
      |||| | |||||| ||||| |||||||| || |||||||| || |||||||| ||||| ||||| ||||||    
T  48813538 gaagttatatgccaa-ttgtcaaagtgtgaattctggttgaatgaggtgagttttcttggccatgttatttct 48813609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 256 - 351
Target Start/End: Complemental strand, 14938341 - 14938246
Alignment:
Q  256 ttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||| || ||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||    
T  14938341 ttgaaagacaatcagttgtgtgctaagttgtctaagtgtgagttttggttgtgggaagtgagtttccttggtcatgtgatttctaaaggtggtatt 14938246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 256 - 351
Target Start/End: Complemental strand, 15365934 - 15365839
Alignment:
Q  256 ttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||| || ||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||    
T  15365934 ttgaaagacaatcagttgtgtgctaagttgtctaagtgtgagttttggttgtgggaagtgagtttccttggtcatgtgatttctaaaggtggtatt 15365839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 107 - 339
Target Start/End: Complemental strand, 19614820 - 19614588
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| || ||||| || ||||| ||||| |||||| |||| |||||    |||||||| || ||||| ||||| |||||| | |||||    
T  19614820 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattc 19614721  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     |   |||||||||||||||| || ||| |||||||||| |||||||| |||||||||||  |||||| |||||| ||||| ||||| |||||||||||     
T  19614720 gagaactgaggaagagcatgcagaacatctgaggattgtattgcaagtattgaaagagaagaagttgtatgccaaattgtcaaagtgcgagttttggtta 19614621  T
Q  307 aaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  ||||||||||| ||||| ||| | ||||||    
T  19614620 agtgaagtgagttttcttggccatattatttct 19614588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 170 - 339
Target Start/End: Original strand, 11770430 - 11770599
Alignment:
Q  170 ttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacca 269  Q
    ||||||| |||||||| |||||||||||| | || || |||||||||| ||| |||||||||||||||| |||||| |||||||| |||||||||||  |    
T  11770430 ttgtggttgtgttcatcgatgatattttgatatactccaagtctgagggagaacatgctgagcatttgaagattgttttgcaagtgttgaaagagaagaa 11770529  T
Q  270 gttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    ||| | ||  || |||||||||||||| || |||||||| || || ||||| ||||| ||||| ||||||    
T  11770530 gttatatgttaaattgtctaagtgtgaattctggttgaaagaggtaagttttcttggccatgttatttct 11770599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 107 - 339
Target Start/End: Complemental strand, 14139824 - 14139592
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||| ||||| ||||| || ||||| || |||||| |||| |||||| ||| ||||||    || |||||||| || || |||||||||||| | |||||    
T  14139824 ctaacgcgcctggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattttgatttattc 14139725  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     ||| |||| ||||||||||| || ||| |||| |||||||||||||| |||||||| ||  |||||| |||||| ||||| || |||||||||||| |     
T  14139724 taagactgaagaagagcatgcagaacatctgagaattgtgttgcaagtattgaaagaaaagaagttgtatgccaaattgtcaaaatgtgagttttggcta 14139625  T
Q  307 aaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  ||||| ||||||||||||||| | ||||||    
T  14139624 agtgaagtaagtttccttggtcatattatttct 14139592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 181 - 339
Target Start/End: Complemental strand, 12689572 - 12689414
Alignment:
Q  181 ttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgcca 280  Q
    ||||| |||||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | |||||    
T  12689572 ttcatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgcca 12689473  T
Q  281 agttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    | ||||||||||||||||| |||||||| ||||||||||| ||||| ||||| ||||||    
T  12689472 aattgtctaagtgtgagttctggttgaaagaagtgagttttcttggccatgttatttct 12689414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 107 - 320
Target Start/End: Original strand, 11386533 - 11386746
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||||||||| |||||||| || | ||| ||||| |||||| ||| ||||||  | || ||||||||||| || |||||||||||  | |||||    
T  11386533 ctaatgcgccaggtgtatttatggagtataagaacagaatttttcatgcttttctggatagattcgtggtggtgtttattgatgatattttaatttattc 11386632  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     ||| |||| ||||||||||| |||||| |||||||||| || || ||  ||||||||||  |||||| ||| |||||||| || ||||| || |||||     
T  11386633 taagactgaagaagagcatgccgagcatctgaggattgtattacaggttctgaaagagaaaaagttgtatgctaagttgtcgaaatgtgaattctggtta 11386732  T
Q  307 aaggaagtgagttt 320  Q
    |  |||||||||||    
T  11386733 agtgaagtgagttt 11386746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 178 - 339
Target Start/End: Original strand, 11551299 - 11551460
Alignment:
Q  178 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 277  Q
    |||||||| |||||||||||| | ||||| ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||  |  | | ||    
T  11551299 gtgttcatcgatgatattttgatttattccaagactgaagaagaacatgttgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatg 11551398  T
Q  278 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |||| |||||||||||||| || |||||||| ||||||||||| ||||| ||||| ||||||    
T  11551399 ccaaattgtctaagtgtgaattctggttgaaagaagtgagttttcttggccatgttatttct 11551460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 107 - 339
Target Start/End: Complemental strand, 19149356 - 19149124
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || |||||| |||| || ||| ||||||||||    |||||||| ||||| || ||||| || ||  | |||||    
T  19149356 ctaatgcgcctggtgtgtttatggagtatatgaattgaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttaatttattc 19149257  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     ||| |||| ||||||||||| |||||| ||| ||||||||||||||| |||||||| ||  ||||||||| ||||||||| || ||||| || |||||     
T  19149256 taagactgatgaagagcatgcagagcatctgaagattgtgttgcaagtgttgaaagaaaagaagttgtgtgtcaagttgtccaaatgtgaattctggtta 19149157  T
Q  307 aaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  ||||| ||||| ||||| ||| | ||||||    
T  19149156 agtgaagtaagttttcttggccatattatttct 19149124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 107 - 339
Target Start/End: Complemental strand, 20748755 - 20748523
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || ||||| ||||| || ||| ||||||||||    |||||||| ||||| || ||||| || ||  | |||||    
T  20748755 ctaatgcgcctggtgtgtttatggagtatatgaacagaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttaatttattc 20748656  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     ||| |||| ||||||||||| |||||| ||| ||||||||||||||| |||||||| ||  ||||||||| ||||||||| || ||||| || |||||     
T  20748655 taagactgatgaagagcatgcagagcatctgaagattgtgttgcaagtgttgaaagaaaagaagttgtgtgtcaagttgtccaaatgtgaattctggtta 20748556  T
Q  307 aaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  ||||| ||||| ||||| ||| | ||||||    
T  20748555 agtgaagtaagttttcttggccatattatttct 20748523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 340
Target Start/End: Original strand, 14262349 - 14262581
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || ||||||||||| || ||| ||||||||||    |||||||| ||||| || ||||| || ||  | |||||    
T  14262349 ctaatgcgcctggtgtgtttatggagtatatgaatagaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttaatttattc 14262448  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     | | |||| ||||||||||| |||||| ||| |||| |||||||||| |||||||| ||  |||||| |||||||||||| || ||||| ||||||||     
T  14262449 ta-gactgaagaagagcatgcagagcatctgaagattatgttgcaagtgttgaaagaaaagaagttgtatgccaagttgtcaaaatgtgaattttggtta 14262547  T
Q  307 aaggaagtgagtttccttggtcatgtgatttcta 340  Q
    |  ||||| ||||| ||||| ||| | |||||||    
T  14262548 agtgaagtaagttttcttggccatattatttcta 14262581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 178 - 339
Target Start/End: Complemental strand, 14956627 - 14956466
Alignment:
Q  178 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 277  Q
    |||||||| |||||||||||| | || || ||| |||| |||||  ||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||    
T  14956627 gtgttcatcgatgatattttgatttactccaagactgaagaagaagatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatg 14956528  T
Q  278 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |||| |||||||||||||| || |||||||| ||||||||||| ||||| ||||| ||||||    
T  14956527 ccaaattgtctaagtgtgaattctggttgaaagaagtgagttttcttggccatgttatttct 14956466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 107 - 339
Target Start/End: Original strand, 23503974 - 23504206
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||| ||||| ||||| || ||||| || |||||| |||| |||||| ||| ||||||    || |||||||| || || ||||||||| || | |||||    
T  23503974 ctaacgcgcccggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattctgatttattc 23504073  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     ||| |||| ||||||||||| || ||| |||| |||||||||||||| |||||||| |   |||||| ||||||  |||| || |||||||||||| |     
T  23504074 gaagactgaagaagagcatgcagaacatctgagaattgtgttgcaagttttgaaagaaaggaagttgtatgccaaactgtcgaaatgtgagttttggcta 23504173  T
Q  307 aaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  ||||||||||||||||||||| | ||||||    
T  23504174 agtgaagtgagtttccttggtcatattatttct 23504206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 107 - 326
Target Start/End: Original strand, 12204904 - 12205123
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || ||||||||||| || ||| ||||||||||    | |||||| ||||| || |||||||| ||  | ||||     
T  12204904 ctaatgcgcctggtgtgtttatggagtacatgaatagaattttccatgcttatctggataaatctgtggtcgtgtttattgatgatatcttaatttattt 12205003  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     ||| |||| ||||||||||| |||||| |||  |||||||||||||| |||||||| ||  |||||| |||||||||||| || ||||| || |||||     
T  12205004 taagactgaagaagagcatgcagagcatctgaaaattgtgttgcaagtgttgaaagaaaagaagttgtatgccaagttgtccaaatgtgaattctggtta 12205103  T
Q  307 aaggaagtgagtttccttgg 326  Q
    |  ||||| ||||| |||||    
T  12205104 agtgaagtaagttttcttgg 12205123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 169 - 339
Target Start/End: Original strand, 11235401 - 11235571
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||      
T  11235401 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 11235500  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    || | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  11235501 agctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 11235571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 107 - 329
Target Start/End: Complemental strand, 13023502 - 13023280
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||| | || |||||  |||| || ||| ||| ||||||    |||||||||||||| || ||||||| |||| | |||||    
T  13023502 ctaatgcgcctggtgtttttatgtattatatgaaccgaattttccatgcttttctggataaatttgtggtggtgtttattgatgataatttgatttattc 13023403  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     ||| |||| || |||||||| || ||| |||| ||||| |||||||| |||||||| ||  |||||| |||||||||||| || |||||||| |||||     
T  13023402 taagactgaagaggagcatgcagaacatctgagaattgtattgcaagttttgaaagaaaagaagttgtatgccaagttgtcaaaatgtgagttgtggtta 13023303  T
Q  307 aaggaagtgagtttccttggtca 329  Q
    |  ||||||||||| || |||||    
T  13023302 agtgaagtgagttttctgggtca 13023280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 169 - 339
Target Start/End: Complemental strand, 14334478 - 14334308
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||      
T  14334478 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 14334379  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  | | |||||| |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  14334378 aactttatgccaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 14334308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 169 - 339
Target Start/End: Original strand, 15159245 - 15159415
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||      
T  15159245 tttgtggttgtgtttatcgacgatattttgatttactccaagactgacgaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 15159344  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    || | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  15159345 agctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 15159415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 107 - 319
Target Start/End: Complemental strand, 13675597 - 13675385
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| || ||||| || |||||  |||| || ||| |||| |||||    |||||||| || || || ||||| ||| || | |||||    
T  13675597 ctaatgcgcctggtgtgttcatggagtatatgaaccgaattttccatgcttacctggataaatttgtggttgtatttattgatgacattctgatttattc 13675498  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
    |||| |||| ||||||||||| |||||| ||| |||||| |||||||| ||||| |||||  |||||| ||| |||||||| ||||||||||| |||||     
T  13675497 aaagactgaagaagagcatgcagagcatctgaagattgtattgcaagtattgaatgagaaaaagttgtatgctaagttgtcgaagtgtgagttctggtta 13675398  T
Q  307 aaggaagtgagtt 319  Q
    |  ||||||||||    
T  13675397 agtgaagtgagtt 13675385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 124 - 340
Target Start/End: Original strand, 15122170 - 15122384
Alignment:
Q  124 tttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagc 223  Q
    ||||||||||| |||||||| || |||| || |||| ||||    |||||||| ||||||||| | ||||| ||||||||||||||||  ||||| ||||    
T  15122170 tttatggaatacatgaataggatttttcgtctttatttggattagtttgtggtcgtgttcatataagatatcttggtgtattcaaagttggaggaggagc 15122269  T
Q  224 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttcct 323  Q
     ||| |||||| |||| |||||||||| || |||  | |||||  |||||| ||  ||| |||| ||||||||||| | |||| | ||||||||||||||    
T  15122270 ttgcggagcatatgagaattgtgttgc-agactt-taggagaataagttgtatgttaaggtgtcgaagtgtgagttctagttgcaagaagtgagtttcct 15122367  T
Q  324 tggtcatgtgatttcta 340  Q
    ||||||| |||| ||||    
T  15122368 tggtcatatgatatcta 15122384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 107 - 339
Target Start/End: Complemental strand, 15626669 - 15626437
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    ||||||| |||||||| |||||||| || |||||  | || |||||| ||||| | || || || ||||| | |||||| |||||||||||  | || |     
T  15626669 ctaatgcaccaggtgtatttatggagtacatgaaccgtatttttcatgcttatttagatcgcttcgtggttgcgttcatcgatgatattttaatatacta 15626570  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     |||||||| ||||| ||||  ||| |||||| |||||| ||||||||  ||||||||||  |||| | ||| |||||||| |||||||| || ||||||    
T  15626569 taagtctgaagaagaacatgtcgagtatttgaagattgttttgcaagtgctgaaagagaagaagttatatgctaagttgtcaaagtgtgaattctggttg 15626470  T
Q  307 aaggaagtgagtttccttggtcatgtgatttct 339  Q
    || || |||||||||||||| ||| | ||||||    
T  15626469 aatgaggtgagtttccttggccatattatttct 15626437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 107 - 339
Target Start/End: Original strand, 18052057 - 18052289
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||| ||||| ||||| || ||||| || |||||| |||| |||||| ||| ||||||    || |||||||| || || ||||| ||| || | |||||    
T  18052057 ctaacgcgcccggtgtattcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgacattctgatttattc 18052156  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     ||| |||| ||||||||||| || ||| |||| |||||||||||||| |||||||| |   |||||| ||||||  |||| || |||||||||||| |     
T  18052157 gaagactgaagaagagcatgcagaacatctgagaattgtgttgcaagttttgaaagaaaggaagttgtatgccaaactgtcgaaatgtgagttttggcta 18052256  T
Q  307 aaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  ||||||||||||||||||||| | ||||||    
T  18052257 agtgaagtgagtttccttggtcatattatttct 18052289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 173 - 339
Target Start/End: Complemental strand, 8709683 - 8709517
Alignment:
Q  173 tggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagtt 272  Q
    |||| ||||| || || ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  || |    
T  8709683 tggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaagaagct 8709584  T
Q  273 gtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
     | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  8709583 ttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 8709517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 181 - 339
Target Start/End: Original strand, 15147085 - 15147243
Alignment:
Q  181 ttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgcca 280  Q
    ||||| |||||||||||  | || || ||| |||| ||||| |||||||||||||||| |||||| |||||||| |||||||||||  |  | | ||| |    
T  15147085 ttcattgatgatatttttatctactccaagactgaagaagaacatgctgagcatttgaagattgttttgcaagtgttgaaagagaagaaactttatgcaa 15147184  T
Q  281 agttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    | ||||||||||||||||| |||||||| || || ||||| ||||| ||||| ||||||    
T  15147185 aattgtctaagtgtgagttctggttgaaagaggtaagttttcttggccatgttatttct 15147243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 169 - 338
Target Start/End: Original strand, 44789539 - 44789708
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    ||||||||  |||| || || ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| || ||||| |||||||||||      
T  44789539 tttgtggttatgtttatcgacgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaaga 44789638  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 338  Q
    || | | ||| || |||||||||||||| || |||||||| || |||||||||||||| ||||| |||||    
T  44789639 agctttatgctaaattgtctaagtgtgaattctggttgaaagaggtgagtttccttggccatgttatttc 44789708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 337
Target Start/End: Original strand, 15559 - 15706
Alignment:
Q  190 gatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtcta 289  Q
    ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||| || |||||||    
T  15559 gatattttgatttactccaagactgaagaagaacatgctgagcatctgatgattgtcttgcaagtgttgaaagagaagaaactttatgctaaattgtcta 15658  T
Q  290 agtgtgagttttggttgaaggaagtgagtttccttggtcatgtgattt 337  Q
    ||||||| || |||||||||||||| ||||| ||||| ||||| ||||    
T  15659 agtgtgaattctggttgaaggaagtaagttttcttggccatgttattt 15706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 169 - 339
Target Start/End: Original strand, 16070461 - 16070631
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || ||||||||| |  | ||||| ||| |||| ||||||||||| ||| || ||| |||||| |||||||| |||||||| ||      
T  16070461 tttgtggttgtgtttattgatgatattctcatttattctaagactgaagaagagcatgcagagtatctgaagattgtattgcaagtgttgaaagaaaaga 16070560  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |||||| |||||||||||| || |||||||| ||||| |  ||||| ||||| || |||||| | ||||||    
T  16070561 agttgtatgccaagttgtccaaatgtgagttctggttaagtgaagtaagttttctgggtcatattatttct 16070631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 107 - 320
Target Start/End: Original strand, 16948576 - 16948789
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| || || |||||||| || |||||  |||| || ||| ||| ||||||    |||||||| ||||| || ||||||||| || | |||||    
T  16948576 ctaatgcgcctggcgtgtttatggagtatatgaaccgaattttccatgcttttctggataaatttgtggttgtgtttattgatgatattctgatttattc 16948675  T
Q  207 -aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggtt 305  Q
     ||| || || || ||||| || |||||| ||| |||||||||||||||||||||||| ||  |||||| ||| ||| |||| |||||||||||||||||    
T  16948676 taaaatc-gaagaggagcacgcagagcatctgaagattgtgttgcaagtcttgaaagaaaagaagttgtatgctaagctgtcaaagtgtgagttttggtt 16948774  T
Q  306 gaaggaagtgagttt 320  Q
     |  |||||||||||    
T  16948775 aagtgaagtgagttt 16948789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 339
Target Start/End: Complemental strand, 10872782 - 10872602
Alignment:
Q  159 tctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| || ||||| |||    
T  10872782 tctggatcggtttgtggtcgtgtttatcgacgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttg 10872683  T
Q  259 aaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    ||||||||  |  | | | | || |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  10872682 aaagagaagaaactttatcctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 10872602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 107 - 326
Target Start/End: Original strand, 15100707 - 15100926
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || |||||  |||| || ||| |||| |||||    || ||||| ||||| || ||||| || ||| | |||||    
T  15100707 ctaatgcgcctggtgtgtttatggagtatatgaaccgaattttccatgcttacctggataaattcgtggttgtgtttattgatgacatcttgatttattc 15100806  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     ||| |||| ||||||||||| || ||| ||| ||| || |||||||| |||||||| ||  |||||| |||||||||||| || |||||||| |||||     
T  15100807 taagactgaagaagagcatgcagaacatctgaagatcgtcttgcaagtgttgaaagaaaagaagttgtatgccaagttgtcaaaatgtgagttctggtta 15100906  T
Q  307 aaggaagtgagtttccttgg 326  Q
    |  ||||| ||||| |||||    
T  15100907 agtgaagtaagttttcttgg 15100926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 329
Target Start/End: Original strand, 26092902 - 26093124
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || |||||  |||| || ||| ||| ||||||    ||||| |||||||| || |||||||||||  | |||||    
T  26092902 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 26093001  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     |||  |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||   ||||| ||| ||||| || || |||||||| |||||     
T  26093002 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaaggaaaagaggttgtatgctaagttatcaaaatgtgagttctggtta 26093101  T
Q  307 aaggaagtgagtttccttggtca 329  Q
    || ||||| ||||| || |||||    
T  26093102 aatgaagtaagttttctgggtca 26093124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 181 - 266
Target Start/End: Complemental strand, 14041765 - 14041680
Alignment:
Q  181 ttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
    ||||| |||||||||||| | || || ||| |||||||||| |||| ||||||||||| |||||| |||||||| |||||||||||    
T  14041765 ttcattgatgatattttgatttactccaagactgaggaagaacatgatgagcatttgaagattgttttgcaagtgttgaaagagaa 14041680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 181 - 266
Target Start/End: Complemental strand, 14351795 - 14351710
Alignment:
Q  181 ttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
    ||||| |||||||||||| | || || ||| |||||||||| |||| ||||||||||| |||||| |||||||| |||||||||||    
T  14351795 ttcattgatgatattttgatttactccaagactgaggaagaacatgatgagcatttgaagattgttttgcaagtgttgaaagagaa 14351710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 237
Target Start/End: Original strand, 39190 - 39402
Alignment:
Q  25 gtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtct 124  Q
    |||||| |||| |||||||  || ||||| ||| ||||  | ||||| || ||||||||||| |||||||| |||||||| || || |||||||| || |    
T  39190 gtgaagtcggaagatatattgaagactgccttcagaacccgttatggtcattatgagtattcggtgatgccttttggagtgtccaacgcgccaggagttt 39289  T
Q  125 ttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagca 224  Q
    ||||||| || ||||| ||||| || ||||| ||| | || |  || || || || ||||| ||||||||||||||||| || || || ||||| || ||    
T  39290 ttatggagtatatgaacagaattttccatccatatttagatcagttcgttgtagtattcattgatgatattttggtgtactctaaatcagaggaggaaca 39389  T
Q  225 tgctgagcatttg 237  Q
    ||| || ||||||    
T  39390 tgcagaacatttg 39402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 107 - 329
Target Start/End: Original strand, 11301317 - 11301539
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || |||||  |||| || ||| ||| ||||||    ||||| |||||||| || |||||||| ||  | |||||    
T  11301317 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatatcttaatttattc 11301416  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     |||  |||||| |||||||| |||||| |||| || ||||||||||| ||||| || ||   ||||| ||| |||||||| || |||||| | |||||     
T  11301417 caagaatgaggaggagcatgcagagcatctgagaatagtgttgcaagtgttgaaggaaaagaggttgtatgctaagttgtcaaaatgtgagatctggtta 11301516  T
Q  307 aaggaagtgagtttccttggtca 329  Q
    || ||||| ||||| || |||||    
T  11301517 aatgaagtaagttttctgggtca 11301539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 107 - 305
Target Start/End: Original strand, 13966772 - 13966970
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||| ||||| ||||| |||||||| || |||||  |||| || ||| ||| ||||||    ||||| |||||||| || |||||||| ||  | |||||    
T  13966772 ctaacgcgcctggtgtgtttatggagtacatgaaccgaatcttccatgcttttctggataagtttgttgtggtgtttattgatgatatcttaatttattc 13966871  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggtt 305  Q
     |||  ||| || |||||||| |||||| |||| ||||| |||||||| |||||||||||   ||||| ||| |||||||| || |||||||| |||||    
T  13966872 caagaatgaagaggagcatgcagagcatctgagaattgtcttgcaagttttgaaagagaagaggttgtatgctaagttgtcaaaatgtgagttctggtt 13966970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 107 - 305
Target Start/End: Original strand, 26116694 - 26116892
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||| ||||| ||||| |||||||| || |||||| |||| || ||| ||| ||||||    ||| | |||||||| || || ||||||||  | |||||    
T  26116694 ctaacgcgcctggtgtttttatggagtacatgaatcgaatcttccatgcttttctggataagtttcttgtggtgtttattgacgatattttaatctattc 26116793  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggtt 305  Q
     |||  |||||| |||||||| |||||| |||| |||||||||||||| ||||| || ||   ||||| ||| |||||||| || |||||||| |||||    
T  26116794 caagaatgaggaggagcatgcagagcatctgagaattgtgttgcaagtgttgaaggaaaagaggttgtatgcaaagttgtcgaaatgtgagttctggtt 26116892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 107 - 329
Target Start/End: Complemental strand, 49154446 - 49154224
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||  || |||||  |||| || ||| ||| ||||||    ||||| |||||||| || |||||||||||  | |||||    
T  49154446 ctaatgcgcctggtgtttttatggggtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 49154347  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     |||  |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||   ||||| ||| ||||| || || |||||||| |||||     
T  49154346 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaaggaaaagaggttgtatgctaagttatcaaaatgtgagttctggtta 49154247  T
Q  307 aaggaagtgagtttccttggtca 329  Q
    || ||||| ||||| || |||||    
T  49154246 aatgaagtaagttttctgggtca 49154224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 266
Target Start/End: Complemental strand, 13688123 - 13688026
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||    
T  13688123 tttgtggttgtgtttatcgacgatattttgatttactccaagactgacgaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaa 13688026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 326
Target Start/End: Original strand, 14284542 - 14284699
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| || ||||| ||||| |||||| | ||||| ||| |||| || |||||| | || ||| |||||||| | |||||||| |||||||||||      
T  14284542 tttgtggttgtattcattgatgacattttgatttattctaagactgaagaggagcatacagaacatctgaggattatattgcaagtattgaaagagaaga 14284641  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttgg 326  Q
    || ||| ||| |||||||| || |||||||| | ||| |  ||||||||||| |||||    
T  14284642 agctgtatgctaagttgtcgaaatgtgagttctagttaagtgaagtgagttttcttgg 14284699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 305
Target Start/End: Complemental strand, 12458714 - 12458587
Alignment:
Q  178 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 277  Q
    ||||| || |||||||||||  | ||||| |||  ||| || |||||||| |||||| |||| ||||| |||||||| |||||||| ||  |||||| ||    
T  12458714 gtgtttattgatgatattttaatctattccaagaatgaagaggagcatgcagagcatctgagaattgtattgcaagttttgaaagaaaagaagttgtatg 12458615  T
Q  278 ccaagttgtctaagtgtgagttttggtt 305  Q
    | |||||||| || |||||||| |||||    
T  12458614 caaagttgtcaaaatgtgagttctggtt 12458587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 326
Target Start/End: Complemental strand, 15342463 - 15342357
Alignment:
Q  220 gagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtt 319  Q
    |||||||| || ||| |||||||||| ||||||||  ||||||||||  |||||| ||| |||||||| || ||||| || ||||| |  ||||||||||    
T  15342463 gagcatgcagaacatctgaggattgtattgcaagtactgaaagagaaaaagttgtatgctaagttgtcgaaatgtgaattctggttaagtgaagtgagtt 15342364  T
Q  320 tccttgg 326  Q
    | |||||    
T  15342363 ttcttgg 15342357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 339
Target Start/End: Complemental strand, 8200596 - 8200540
Alignment:
Q  283 ttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  8200596 ttgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 8200540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 245
Target Start/End: Original strand, 18588359 - 18588435
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgt 245  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||||||||||||||| ||||||    
T  18588359 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatttgaagattgt 18588435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 321; Significance: 0; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 11 - 351
Target Start/End: Original strand, 16380539 - 16380879
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16380539 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 16380638  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16380639 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 16380738  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16380739 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 16380838  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  16380839 aagtgagtttccttggtcatgtgatttctaagggtggtatt 16380879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 11 - 351
Target Start/End: Original strand, 16648135 - 16648475
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16648135 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 16648234  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16648235 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 16648334  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16648335 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgcgccaagttgtctaagtgtgagttttggttgaagg 16648434  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  16648435 aagtgagtttccttggtcatgtgatttctaagggtggtatt 16648475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 11 - 351
Target Start/End: Original strand, 1646980 - 1647320
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1646980 atcatcagattagagtgaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 1647079  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||    
T  1647080 tgcgccaggtgtctttatggaatatatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgacattttggtgtattcgaag 1647179  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  1647180 tttgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagataaccggttgtgtgccaagttgtctaagtgtgagttttggttgaagg 1647279  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  1647280 aagtgagtttccttggtcatgtgatttctaagggtggtatt 1647320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 11 - 351
Target Start/End: Complemental strand, 23998363 - 23998023
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23998363 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 23998264  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23998263 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattgaaag 23998164  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    || ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||    
T  23998163 tccgaggaagagcatgctgaacatttgaggattgtgttgtaagtcttgaaagagaaccagttatgtgccaagttgtctaagtgtgagttttggttggagg 23998064  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  23998063 aagtgagtttccttggtcatgtgatttctaagggtggtatt 23998023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 11 - 351
Target Start/End: Complemental strand, 14130584 - 14130244
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| ||||||||||| |||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||| |||||||| |||| ||    
T  14130584 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggatactatgagtattatgtgatgtcatttggattatccaa 14130485  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    || || ||||||||| |||||||| |||||||||| ||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||| |||    
T  14130484 tgtgctaggtgtcttcatggaatatatgaatagaacatttcatccttatttggaccgttttgtggtggtgtttagagatgatattttggtgtattcgaag 14130385  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    | |||||| ||||||||||||||||||||||||||||| | ||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||   |    
T  14130384 tttgaggaggagcatgctgagcatttgaggattgtgttacgagtcttgaaggagaaccagttatgtgctaagttgtctaagtgtgagttttggttgtgag 14130285  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  14130284 aagtgagtttccttggtcatgtgatttctaaaggtggtatt 14130244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 11 - 351
Target Start/End: Complemental strand, 16100130 - 16099784
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||  ||||||||||| ||||||||||||||  |||| |||||||||||||||||||||||||||| ||| |||||||||||||| |||||    
T  16100130 atcatcagattatagtgaaggcggaagatatatccaaaacatcgttacgaacgaggtatggacactatgagtattatgtaatgccatttggagtgtctaa 16100031  T
Q  111 tgcgccaggtgtctttat------ggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtat 204  Q
    || |||||||||||||||      ||| || |||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||| ||||||||||    
T  16100030 tgtgccaggtgtctttatctttatggagtatatgaatagaatatttcatccatatttggaccgttttgtggtggtgtttatagatgataatttggtgtat 16099931  T
Q  205 tcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggt 304  Q
    || |||||| |||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  16099930 tcgaagtctaaggaggagcacgctgagcatttaaggattgtgttgcaagtcttgaaagagaaccagttatgtgctaagttgtctaagtgtgagttttggt 16099831  T
Q  305 tgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    || ||||||||| ||||||||||||||||||||||||||||||||||    
T  16099830 tgcaggaagtgaatttccttggtcatgtgatttctaagggtggtatt 16099784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 11 - 351
Target Start/End: Original strand, 23025912 - 23026231
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| ||||||||||| ||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||| |      
T  23025912 atcatcagattagagtgaaggcggaagatatatccaaaactacgtctcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatat-- 23026009  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
                       ||||| |||||||||||||||||||||| | || ||||||||||||||||||| ||||||||||||||||||||||  |||    
T  23026010 -------------------gaatatatgaatagaatatttcatccttttatgaaccgttttgtggtggtgtttatagatgatattttggtgtatttgaag 23026090  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    |||||||| |||||||||  |||||||||||||||||||| ||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||  ||    
T  23026091 tctgaggaggagcatgcttcgcatttgaggattgtgttgcgagtcttgaaggagaaccagttatgtgctaagttgtctaagtgtgagttttggttgcggg 23026190  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  23026191 aagtgagtttccttggtcatgtgatttctaagggtggtatt 23026231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 194 - 351
Target Start/End: Original strand, 18836257 - 18836414
Alignment:
Q  194 ttttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtg 293  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||| ||||||||    
T  18836257 ttttggtgtattcaaaatctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttggaagagaaccagttatgtgctaagttatctaagtg 18836356  T
Q  294 tgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    ||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||    
T  18836357 tgagttttggttgaagggagtgagcttccttggtcacgtgatttctaagggtggtatt 18836414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 234 - 351
Target Start/End: Complemental strand, 18578101 - 18577984
Alignment:
Q  234 tttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtg 333  Q
    |||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18578101 tttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagtatgagttttggttgaaggaagtgagtttccttggtcatgtg 18578002  T
Q  334 atttctaagggtggtatt 351  Q
    ||||||||||||||||||    
T  18578001 atttctaagggtggtatt 18577984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 234 - 351
Target Start/End: Original strand, 19985805 - 19985922
Alignment:
Q  234 tttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtg 333  Q
    |||||||||||||||||| |||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  19985805 tttgaggattgtgttgcaggtcttgaaggagaaccagttatgtgctaagttgtctaagtgtgagttttggttgaaggaagcgagttttcttggtcatgtg 19985904  T
Q  334 atttctaagggtggtatt 351  Q
    ||||||||||||||||||    
T  19985905 atttctaagggtggtatt 19985922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 256 - 351
Target Start/End: Complemental strand, 16234898 - 16234803
Alignment:
Q  256 ttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    ||||| ||||| ||||| ||||| ||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  16234898 ttgaaggagaatcagttatgtgctaagttgtctaagtgtgaattttggttgaaggaagggagtttcctgggtcatgtgatttctaagggtggtatt 16234803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 256 - 351
Target Start/End: Complemental strand, 21929074 - 21928979
Alignment:
Q  256 ttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    ||||| ||||| ||||||||||| |||||||| ||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||    
T  21929074 ttgaaggagaatcagttgtgtgctaagttgtcaaagtgtgagttttggttgcgggaagggagtttccttggtcatgtgatttctaagggtggtatt 21928979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 180 - 339
Target Start/End: Original strand, 22828690 - 22828849
Alignment:
Q  180 gttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgcc 279  Q
    |||||| |||||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||||    
T  22828690 gttcatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgcc 22828789  T
Q  280 aagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    || ||||||||||||||||| |||||||| ||||||||||| ||||| ||||| ||||||    
T  22828790 aaattgtctaagtgtgagttctggttgaaagaagtgagttttcttggccatgttatttct 22828849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 107 - 339
Target Start/End: Complemental strand, 19881317 - 19881085
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| || ||||| || |||||||| || |||||| |||| |||||    |||||||| |||||||| ||||| |||||| | |||||    
T  19881317 ctaatgcgcctggtgtgttcatggagtatatgaataggatttttcatgcttacctggataaatttgtggttgtgttcattgatgacattttgatctattc 19881218  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     |   |||||||||||||||| || ||| |||||||||| |||||||| |||||||||||  |  ||| |||||| ||||| ||||| ||||| |||||     
T  19881217 gagaactgaggaagagcatgcagaacatctgaggattgtattgcaagtattgaaagagaagaaactgtatgccaaattgtcaaagtgcgagttctggtta 19881118  T
Q  307 aaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  ||||||||||| ||||| ||| | ||||||    
T  19881117 agtgaagtgagttttcttggccatattatttct 19881085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 127 - 339
Target Start/End: Original strand, 34643868 - 34644080
Alignment:
Q  127 atggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatg 226  Q
    ||||| || ||||||||||| |||||| ||||||||||    |||||||| |||| ||| ||||| |||||| | ||||| |   | |||||||||||||    
T  34643868 atggagtatatgaatagaatttttcatgcttatctggataaatttgtggttgtgtacattgatgacattttgatctattcgacaacggaggaagagcatg 34643967  T
Q  227 ctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttgg 326  Q
    | || ||| | || |||||||||||||| |||||||||||  |||||| |||||| ||||| ||||||||||| ||||| |  ||||| |||||||||||    
T  34643968 cagaacatctaagaattgtgttgcaagtattgaaagagaagaagttgtatgccaaattgtcgaagtgtgagttctggttaagtgaagtaagtttccttgg 34644067  T
Q  327 tcatgtgatttct 339  Q
     ||| | ||||||    
T  34644068 ccatattatttct 34644080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 169 - 338
Target Start/End: Original strand, 2873127 - 2873296
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    ||||||||  |||| || || ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| ||||| |||||      
T  2873127 tttgtggttatgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaggagaaga 2873226  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 338  Q
    || | | ||| || |||||||||||||| ||||||||||| ||||||||||||||||| ||||| |||||    
T  2873227 agctttatgctaaattgtctaagtgtgaattttggttgaaagaagtgagtttccttggccatgttatttc 2873296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 124 - 337
Target Start/End: Complemental strand, 23080471 - 23080258
Alignment:
Q  124 tttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagc 223  Q
    |||||||| || |||||| | || |||||| | | ||| || ||||| ||||| |||||||| |||||||||||| | || || |||||||||||||| |    
T  23080471 tttatggagtacatgaatcgcatttttcatgcatttctagatcgtttcgtggttgtgttcatcgatgatattttgatttactccaagtctgaggaagaac 23080372  T
Q  224 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttcct 323  Q
    ||||||||||||||| |||||| ||||||||  ||||||||||  |  | | ||| || || || |||| ||| || |||||||| || |||||||||||    
T  23080371 atgctgagcatttgaagattgttttgcaagtgctgaaagagaagaaactttatgctaaattatcaaagtttgaattctggttgaaagaggtgagtttcct 23080272  T
Q  324 tggtcatgtgattt 337  Q
    ||| ||||| ||||    
T  23080271 tggccatgttattt 23080258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 179 - 339
Target Start/End: Original strand, 18965629 - 18965789
Alignment:
Q  179 tgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgc 278  Q
    ||||||| |||||||||||| | ||| | |||||||| ||||| ||| |||||||||||| |||||| || |||||  ||||||||||  |||| | |||    
T  18965629 tgttcattgatgatattttgatatatgctaagtctgaagaagaacattctgagcatttgaagattgtttttcaagtgatgaaagagaagaagttatatgc 18965728  T
Q  279 caagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
     |||||||| |||||||| || |||||||| || |||||||||||||| ||| | ||||||    
T  18965729 taagttgtcaaagtgtgaattctggttgaatgaggtgagtttccttggccatattatttct 18965789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 107 - 326
Target Start/End: Original strand, 14378178 - 14378397
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| || ||||| || |||||  |||| || ||| ||| ||||||    |||||||| || || || ||||||| | || | |||||    
T  14378178 ctaatgcgcctggtgtgttcatggagtatatgaaccgaattttacatgcttttctggataaatttgtggttgtatttattgatgatagtctgatttattc 14378277  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     ||| |||| || |||||||| |||||| ||| |||||| ||||||||||||||||||||  |||||| |||||||||||| || ||||||||||||||     
T  14378278 taagactgaagaggagcatgcagagcatctgaagattgtattgcaagtcttgaaagagaaaaagttgtatgccaagttgtcgaaatgtgagttttggtta 14378377  T
Q  307 aaggaagtgagtttccttgg 326  Q
    |  ||||| ||||| |||||    
T  14378378 agtgaagtaagttttcttgg 14378397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 107 - 326
Target Start/End: Original strand, 14379728 - 14379947
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| || ||||| || |||||  |||| || ||| ||| ||||||    |||||||| || || || ||||||| | || | |||||    
T  14379728 ctaatgcgcctggtgtgttcatggagtatatgaaccgaattttacatgcttttctggataaatttgtggttgtatttattgatgatagtctgatttattc 14379827  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     ||| |||| || |||||||| |||||| ||| |||||| ||||||||||||||||||||  |||||| |||||||||||| || ||||||||||||||     
T  14379828 taagactgaagaggagcatgcagagcatctgaagattgtattgcaagtcttgaaagagaaaaagttgtatgccaagttgtcgaaatgtgagttttggtta 14379927  T
Q  307 aaggaagtgagtttccttgg 326  Q
    |  ||||| ||||| |||||    
T  14379928 agtgaagtaagttttcttgg 14379947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 67 - 254
Target Start/End: Original strand, 23085993 - 23086180
Alignment:
Q  67 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggacc 166  Q
    |||||||| ||||| ||||| |||||||| || || ||  | |||||||| ||||| |||||||| || |||||| | || |||||| | ||| |||| |    
T  23085993 tatggacattatgaatattcagtgatgcctttcggtgttacaaatgcgccgggtgtgtttatggagtacatgaatcgtatttttcatgcgtatttggatc 23086092  T
Q  167 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagt 254  Q
    | || ||||| |||||||| |||||||||||| | || || |||| ||| ||||| |||||||||||||||| |||||| ||||||||    
T  23086093 gcttcgtggttgtgttcatcgatgatattttgatatactctaagtatgaagaagaacatgctgagcatttgaagattgttttgcaagt 23086180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 340
Target Start/End: Original strand, 24294106 - 24294277
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||      
T  24294106 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 24294205  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttcta 340  Q
    || | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| |||||||    
T  24294206 agctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttcta 24294277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 178
Target Start/End: Original strand, 14643667 - 14643817
Alignment:
Q  25 gtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtct 124  Q
    |||||| |||||||||| ||||| ||||| |||||||| || ||||||||||  || |||||||||||||||||||| ||  || ||||||  |||||||    
T  14643667 gtgaagacggaggatatttccaagactgcattccgaactagatatggacact--ga-tattctgtgatgccatttggtgttactgatgcgcatggtgtct 14643763  T
Q  125 ttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtgg 178  Q
    | |||||||| ||||||||||| || ||||||||| |||| |  ||||||||||    
T  14643764 tcatggaatatatgaatagaatcttccatccttatttggatcagtttgtggtgg 14643817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 339
Target Start/End: Original strand, 18196049 - 18196227
Alignment:
Q  161 tggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 260  Q
    |||| ||||||||||| ||||||||  ||||||||||| | || || ||||| || |||||||||||| ||||||||| |||||| ||||||||  ||||    
T  18196049 tggatcgttttgtggttgtgttcatttatgatattttgatatactccaagtccgaagaagagcatgctaagcatttgaagattgttttgcaagtgctgaa 18196148  T
Q  261 agagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    ||||||  || | | ||| || ||||| |||| ||| ||||||||||| || |||| ||| ||||| ||||| ||||||    
T  18196149 agagaagaagctatatgctaaattgtcaaagtatgaattttggttgaaagatgtgaattttcttggccatgttatttct 18196227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 107 - 320
Target Start/End: Complemental strand, 18796709 - 18796496
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||| ||| ||||| || ||||| || ||||| ||||| || ||| | ||||||||    |||||||| || ||||| ||| | |||||| | |||||    
T  18796709 ctaatgtgcctggtgtgttcatggagtatatgaacagaattttccatgcctatctggataaatttgtggttgtattcattgataacattttgatctattc 18796610  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     |   |||| ||||||||||| || ||| ||| ||||||||||||||| |||||||||||  |||||| |||||| ||||| ||||||||||| |||||     
T  18796609 tagaactgaagaagagcatgcagaacatctgaagattgtgttgcaagtattgaaagagaagaagttgtatgccaaattgtcgaagtgtgagttctggtta 18796510  T
Q  307 aaggaagtgagttt 320  Q
    || |||||||||||    
T  18796509 aatgaagtgagttt 18796496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 172 - 339
Target Start/End: Original strand, 16925965 - 16926132
Alignment:
Q  172 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 271  Q
    ||||| || ||||| |||||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |      
T  16925965 gtggttgttttcatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaac 16926064  T
Q  272 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    | | ||||||||| ||||||||||| || |||||||| || || ||||| ||||| ||||| ||||||    
T  16926065 tttatgccaagttatctaagtgtgaattctggttgaaagaggtaagttttcttggccatgtcatttct 16926132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 337
Target Start/End: Original strand, 22760798 - 22760947
Alignment:
Q  188 atgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtc 287  Q
    ||||||||||| | || || |||||||| |||||||||||||||||||||| | | || ||| |||| |||||||||||  || | | ||| || |||||    
T  22760798 atgatattttgatttactccaagtctgaagaagagcatgctgagcatttgaagctggttttgtaagtgttgaaagagaagaagctttatgcgaaattgtc 22760897  T
Q  288 taagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgattt 337  Q
    ||||||||| || |||||||| |||||||| || ||||| ||||| ||||    
T  22760898 taagtgtgaattctggttgaaagaagtgagctttcttggacatgttattt 22760947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 67 - 339
Target Start/End: Original strand, 18406166 - 18406438
Alignment:
Q  67 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggacc 166  Q
    |||||||| |||||||||   |||||||| || || ||  | ||||| || || || |||||||| || |||||| | || |||||| | | | |||| |    
T  18406166 tatggacattatgagtataaggtgatgccgttcggtgttacaaatgcacctggagtatttatggagtacatgaatcgcatctttcatgcatttttggatc 18406265  T
Q  167 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
    |||||||||| || ||||| |||||||||||| | || || ||| |||| ||||| ||||||||||||||||   | || |||||||| |||||||||||    
T  18406266 gttttgtggttgttttcattgatgatattttgatttactccaagactgaagaagaacatgctgagcatttgaaactggttttgcaagtgttgaaagagaa 18406365  T
Q  267 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
      |  | | ||| || |||| ||||||||| || |||||||| |||||||| || ||||| ||||| ||||||    
T  18406366 gaaactatatgctaaattgtttaagtgtgaattctggttgaaagaagtgagctttcttggacatgttatttct 18406438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 187 - 339
Target Start/End: Original strand, 20634282 - 20634434
Alignment:
Q  187 gatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 286  Q
    |||||||||||| | || || |||||| | ||||| |||||||||||||||| | | || |||||||| |||||||||||  || | | ||| || ||||    
T  20634282 gatgatattttgatttactccaagtctaaagaagaacatgctgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcgaaattgt 20634381  T
Q  287 ctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |||||||||| || |||||||| |||||||| || ||||| ||||| ||||||    
T  20634382 ctaagtgtgaattctggttgaaagaagtgagctttcttggacatgttatttct 20634434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 178 - 338
Target Start/End: Original strand, 28261530 - 28261690
Alignment:
Q  178 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 277  Q
    |||||||| || ||||||||| | || || ||| |||| ||||| ||||| |||||| ||| |||||| || ||||| |||||||||||  |  | | ||    
T  28261530 gtgttcatcgacgatattttgatttactccaagactgaagaagaacatgcagagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatg 28261629  T
Q  278 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 338  Q
    |||| |||||||||||||| || |||||||| ||||||||||||| ||| ||||| |||||    
T  28261630 ccaaattgtctaagtgtgaattctggttgaaagaagtgagtttccctggccatgttatttc 28261690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 178 - 338
Target Start/End: Complemental strand, 28284386 - 28284226
Alignment:
Q  178 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 277  Q
    |||||||| || ||||||||| | || || ||| |||| ||||| ||||| |||||| ||| |||||| || ||||| |||||||||||  |  | | ||    
T  28284386 gtgttcatcgacgatattttgatttactccaagactgaagaagaacatgcagagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatg 28284287  T
Q  278 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 338  Q
    |||| |||||||||||||| || |||||||| ||||||||||||| ||| ||||| |||||    
T  28284286 ccaaattgtctaagtgtgaattctggttgaaagaagtgagtttccctggccatgttatttc 28284226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 178 - 338
Target Start/End: Original strand, 28340279 - 28340439
Alignment:
Q  178 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 277  Q
    |||||||| || ||||||||| | || || ||| |||| ||||| ||||| |||||| ||| |||||| || ||||| |||||||||||  |  | | ||    
T  28340279 gtgttcatcgacgatattttgatttactccaagactgaagaagaacatgcagagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatg 28340378  T
Q  278 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 338  Q
    |||| |||||||||||||| || |||||||| ||||||||||||| ||| ||||| |||||    
T  28340379 ccaaattgtctaagtgtgaattctggttgaaagaagtgagtttccctggccatgttatttc 28340439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 338
Target Start/End: Complemental strand, 25114499 - 25114340
Alignment:
Q  179 tgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgc 278  Q
    ||||||| |||||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||     
T  25114499 tgttcatcgatgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgt 25114400  T
Q  279 caagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 338  Q
    ||| || ||||||||||| || |||||||| || |||||||| ||||| ||||| |||||    
T  25114399 caaattatctaagtgtgaattctggttgaaagaggtgagttttcttggccatgttatttc 25114340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 339
Target Start/End: Original strand, 27564160 - 27564327
Alignment:
Q  172 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 271  Q
    ||||| |||||||| ||||| |||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |      
T  27564160 gtggttgtgttcatcgatgaaattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaac 27564259  T
Q  272 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    | | ||| || || ||||||||||| || |||||||| ||||| ||||| ||||| ||||| ||||||    
T  27564260 tttatgctaaattatctaagtgtgaattctggttgaaagaagtaagttttcttggccatgttatttct 27564327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 169 - 339
Target Start/End: Original strand, 5837543 - 5837713
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| || ||||| || || ||| || | ||||| ||| |||||||||| |||| ||||||| ||| || ||| |||||||| |||||||| ||      
T  5837543 tttgtggttgtcttcattgacgacattctgatttattccaagactgaggaagaacatgttgagcatctgaagactgttttgcaagtgttgaaagaaaaga 5837642  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    || | | |||||||||||||||||||||||| |||||||| || || ||||| ||||| || || ||||||    
T  5837643 agctttatgccaagttgtctaagtgtgagttctggttgaaagaggtaagttttcttggccacgttatttct 5837713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 326
Target Start/End: Complemental strand, 19454981 - 19454824
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| || || || ||||| || ||| | ||||||||| || | ||||||||||| |||||| ||| ||| || |||||||| |||||||| ||      
T  19454981 tttgtggttgtatttattgatgacatcttgatttattcaaagactaaagaagagcatgcagagcatctgaagatagtattgcaagttttgaaagaaaaga 19454882  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttgg 326  Q
    |||||| ||| |||||||| ||||||||||| ||||| |  ||||||||||| |||||    
T  19454881 agttgtatgctaagttgtcaaagtgtgagttctggttaagtgaagtgagttttcttgg 19454824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 339
Target Start/End: Original strand, 19487582 - 19487766
Alignment:
Q  155 cttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagt 254  Q
    ||||| |||| || |||||||| || || || ||||| || ||| | ||||| |||||||| ||||||||||| |||||||| | |||||||||||||||    
T  19487582 cttatttggatcggtttgtggttgtttttattgatgacatcttgatttattctaagtctgaagaagagcatgcagagcatttaaagattgtgttgcaagt 19487681  T
Q  255 cttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
     ||||| |  ||  |||||| |||||||||||| || ||||| || ||||| |  ||||| ||||| ||||| ||| | ||||||    
T  19487682 gttgaaggtaaagaagttgtatgccaagttgtccaaatgtgaattctggttaagtgaagtaagttttcttggccatattatttct 19487766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 339
Target Start/End: Original strand, 25608203 - 25608355
Alignment:
Q  187 gatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 286  Q
    |||||||||||| | || || |||||||| |||||  ||||||||||||||| |||||| || ||||| |||||||||||  || | | ||| || ||||    
T  25608203 gatgatattttgatttactccaagtctgaagaagaagatgctgagcatttgaagattgttttacaagtgttgaaagagaagaagctttatgctaaattgt 25608302  T
Q  287 ctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    | |||||||| || |||||||| || || ||||| ||||| ||||| ||||||    
T  25608303 caaagtgtgaattctggttgaaagaggtaagttttcttggccatgttatttct 25608355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 172 - 339
Target Start/End: Original strand, 16961809 - 16961976
Alignment:
Q  172 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 271  Q
    ||||| || ||||| || ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |      
T  16961809 gtggttgttttcattgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaac 16961908  T
Q  272 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    | | ||||||||  ||||||||||| || |||||||| || || ||||| ||||| ||||| ||||||    
T  16961909 tttatgccaagtcatctaagtgtgaattctggttgaaagaggtaagttttcttggccatgtcatttct 16961976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 305
Target Start/End: Complemental strand, 24366431 - 24366233
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||| ||||||||| |||||||| || |||||  |||| || ||| ||| ||||||    ||||| |||||||| || |||||||||||  | |||||    
T  24366431 ctaatgtgccaggtgtatttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 24366332  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggtt 305  Q
     |||  |||||| |||||||| |||||  |||| ||||| |||||||| ||||| || ||   ||||| ||| |||||||| ||||||||||| |||||    
T  24366331 caagaatgaggaggagcatgcagagcacctgagaattgtattgcaagtgttgaaggaaaagaggttgtatgcaaagttgtcgaagtgtgagttctggtt 24366233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 329
Target Start/End: Original strand, 28281075 - 28281297
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||| ||||| ||||| || ||||| || |||||| |||| |||||| ||| ||||||    || |||||||| || || ||||| ||| || | |||||    
T  28281075 ctaacgcgccgggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgacattctgatttattc 28281174  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     ||| |||| | ||||||||| || ||| |||| |||||||||||||| |||||||| |   |||||| ||||||  |||| || ||||| |||||| |     
T  28281175 gaagactgaaggagagcatgcagaacatctgagaattgtgttgcaagttttgaaagaaaggaagttgtatgccaaactgtcgaaatgtgaattttggcta 28281274  T
Q  307 aaggaagtgagtttccttggtca 329  Q
    |  ||||||||||||||||||||    
T  28281275 agtgaagtgagtttccttggtca 28281297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 326
Target Start/End: Complemental strand, 25769863 - 25769644
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || |||||  |||| || ||| |||||| |||    |||||||| ||||| || ||||||||  |  | |||||    
T  25769863 ctaatgcgcctggtgtatttatggagtatatgaaccgaattttccatgcttatccggataaatttgtggttgtgtttattgatgatatcctaatttattc 25769764  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     |||| ||| ||||||||||| |||||| ||| ||||||||||||||| |||||| | |   |||||| ||| |||||||| || ||||| || |||||     
T  25769763 taagtatgaagaagagcatgcagagcatctgaagattgtgttgcaagtgttgaaataaatgaagttgtatgctaagttgtccaaatgtgaattctggtta 25769664  T
Q  307 aaggaagtgagtttccttgg 326  Q
    |  ||||| ||||| |||||    
T  25769663 agtgaagtaagttttcttgg 25769644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 339
Target Start/End: Complemental strand, 18450547 - 18450290
Alignment:
Q  82 tattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgt 181  Q
    |||| ||||||||| || || ||  |||||||||  || || ||||||||||| || ||  | || |||||| ||||||| || |||||||| || ||||    
T  18450547 tattttgtgatgcctttcggtgttactaatgcgctgggagtatttatggaatatattaaccgtatttttcatacttatctagatcgttttgttgttgtgt 18450448  T
Q  182 tcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaa 281  Q
    | |||||||||||| || | || || || |   |||| || ||||  ||||||||||| ||||| ||||||||  |||| | |||  |||| | ||||||    
T  18450447 ttatagatgatattctgatatactctaaattcaaggaggaacatgtcgagcatttgagaattgttttgcaagtgctgaaggggaagaagttatatgccaa 18450348  T
Q  282 gttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    ||| || ||||| || || |||||||| |||| |||||| ||||||||| | ||||||    
T  18450347 gttatcgaagtgcgaattctggttgaacgaagggagttttcttggtcatattatttct 18450290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 329
Target Start/End: Original strand, 10467173 - 10467333
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    ||||| |||||||| || ||||||||| |  | ||||| |||  ||| || |||||||| |||||| |||| ||||| |||||||| |||||||| ||      
T  10467173 tttgttgtggtgtttattgatgatattctaatctattccaagaatgaagaggagcatgcagagcatctgagaattgtattgcaagttttgaaagaaaaga 10467272  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtca 329  Q
     ||||| ||| |||||||| || |||||||| ||||| |  ||||||||||| || |||||    
T  10467273 ggttgtatgcaaagttgtcaaaatgtgagttctggttaagcgaagtgagttttctgggtca 10467333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 320
Target Start/End: Complemental strand, 15461293 - 15461142
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||||||||| |||||||||||| || | ||||| ||  |||| || || || || || || |||| ||||||||||||  | ||||||||||       
T  15461293 tttgtggtggtgtttatagatgatattctgatttattctaaaactgaagaggaacacgccgaacacttgaagattgtgttgcagattttgaaagagagaa 15461194  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagttt 320  Q
    |||||| |||||||||||| ||||| || || ||||| |  |||||||||||    
T  15461193 agttgtatgccaagttgtcgaagtgcgatttctggttaagtgaagtgagttt 15461142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 339
Target Start/End: Complemental strand, 19866644 - 19866474
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| || || || |||||||||||| | || || ||| ||||  |||| |||||||||||| ||| |||||| |||||||| |||||||||||      
T  19866644 tttgtggttgtttttatcgatgatattttgatttactccaagactgaaaaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaaga 19866545  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  | | ||| ||  | |||||| ||||||| |||||||| || || ||||| ||||| ||||| ||||||    
T  19866544 aactttatgctaaactatctaagcgtgagttctggttgaaagaggtaagttttcttggccatgttatttct 19866474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 338
Target Start/End: Complemental strand, 27189350 - 27189224
Alignment:
Q  212 ctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagga 311  Q
    |||| ||||| ||||| || ||| ||| |||||| || ||||| |||||||||||  |  | | ||| || ||||| |||||||| || |||||||| ||    
T  27189350 ctgaagaagaacatgcggaacatctgaagattgtcttacaagtgttgaaagagaagaaactttatgctaaattgtccaagtgtgaattctggttgaaaga 27189251  T
Q  312 agtgagtttccttggtcatgtgatttc 338  Q
    ||||||||||||||| ||||| |||||    
T  27189250 agtgagtttccttggccatgttatttc 27189224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 338
Target Start/End: Original strand, 27259890 - 27260016
Alignment:
Q  212 ctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagga 311  Q
    |||| ||||| ||||| || ||| ||| |||||| || ||||| |||||||||||  |  | | ||| || ||||| |||||||| || |||||||| ||    
T  27259890 ctgaagaagaacatgcggaacatctgaagattgtcttacaagtgttgaaagagaagaaactttatgctaaattgtccaagtgtgaattctggttgaaaga 27259989  T
Q  312 agtgagtttccttggtcatgtgatttc 338  Q
    ||||||||||||||| ||||| |||||    
T  27259990 agtgagtttccttggccatgttatttc 27260016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 320
Target Start/End: Complemental strand, 19436916 - 19436808
Alignment:
Q  212 ctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagga 311  Q
    |||| ||||||||||| || ||| ||| ||||||||||||| |  | ||||||||  |||||| ||| |||||||| ||||||||||| || || |  ||    
T  19436916 ctgaagaagagcatgcagaacatctgaagattgtgttgcaaattctaaaagagaaagagttgtatgctaagttgtcgaagtgtgagttctgcttaagtga 19436817  T
Q  312 agtgagttt 320  Q
    |||||||||    
T  19436816 agtgagttt 19436808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 212 - 287
Target Start/End: Original strand, 5295573 - 5295648
Alignment:
Q  212 ctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtc 287  Q
    |||| ||||||||||| |||||| |||  |||||||||||||| |||||||| ||   ||||| ||||||||||||    
T  5295573 ctgaagaagagcatgcagagcatctgaaaattgtgttgcaagtgttgaaagaaaagaggttgtatgccaagttgtc 5295648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 321; Significance: 0; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 11 - 351
Target Start/End: Complemental strand, 30139686 - 30139346
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30139686 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 30139587  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30139586 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 30139487  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30139486 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 30139387  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  30139386 aagtgagtttccttggtcatgtgatttctaagggtggtatt 30139346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 11 - 351
Target Start/End: Complemental strand, 30149237 - 30148897
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30149237 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 30149138  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30149137 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 30149038  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30149037 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 30148938  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  30148937 aagtgagtttccttggtcatgtgatttctaagggtggtatt 30148897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 11 - 351
Target Start/End: Original strand, 8272659 - 8272999
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8272659 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 8272758  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8272759 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 8272858  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  8272859 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgcgccaagttgtctaagtgtgagttttggttgaagg 8272958  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  8272959 aagtgagtttccttggtcatgtgatttctaagggtggtatt 8272999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 11 - 351
Target Start/End: Complemental strand, 15611983 - 15611643
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15611983 atcatcagattagagtgaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 15611884  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  15611883 tgcaccaggtgtctttatggaatatatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaag 15611784  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||| |||||||||||||||||||||| ||||||||||||||||||    
T  15611783 tctgaggaagagcatgctgagcatttgaggattgtcttgcaagttttgaaagataaccggttgtgtgccaagttgtctaagcgtgagttttggttgaagg 15611684  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  15611683 aagtgagtttccttggtcatgtgatttctaagggtggtatt 15611643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 11 - 351
Target Start/End: Original strand, 13965612 - 13965953
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  13965612 atcatcagattagagtaaaggcggtagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 13965711  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  13965712 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaag 13965811  T
Q  211 tctgaggaag-agcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaag 309  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  13965812 tctgaggaagaagcatgctgagcatttgaggattgtgttgcaagacttgaaagagaaccagttgtctgccaatttgtctaagtgtgagttttggttgaag 13965911  T
Q  310 gaagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  13965912 gaagtgagttttcttggtcatgtgatttctaagggtggtatt 13965953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 11 - 351
Target Start/End: Original strand, 6151113 - 6151453
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| |||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6151113 atcatcagattagagtgaaggcagaagatatatccaaaactgtgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaa 6151212  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    ||||||||||||||||||||| || ||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||     
T  6151213 tgcgccaggtgtctttatggagtatatgaataaaatatttcatccttatctagaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaa 6151312  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    |||||||| ||||||||||||||| ||| ||||||||||||||| ||||| ||||||||||| ||||| |||||||||||||| ||||||||||||||||    
T  6151313 tctgaggaggagcatgctgagcatctgacgattgtgttgcaagtgttgaaggagaaccagttatgtgctaagttgtctaagtgcgagttttggttgaagg 6151412  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  6151413 aagtgagtttccttggtcatgtgatttctaagggtggtatt 6151453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 11 - 351
Target Start/End: Complemental strand, 25768198 - 25767858
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| ||||| || || |||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  25768198 atcatcagattagagtgaaagcagatgatatatccaaaaccgcgttccaaacaaggtatggacactatgagtattctgtgatgccattcggagtatctaa 25768099  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    | ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||     
T  25768098 ttcgccaggtgtcttcatggaatatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcaaaa 25767999  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    |||||| | |||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  25767998 tctgagaaggagcatgctgagcatttgaggattatgttgcaagtcttgaaggagaaccagttatgtgctaagttgtctaagtgtgagttttggttgaagg 25767899  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  25767898 aagtgagtttccttggtcatgtgatttctcagggtggtatt 25767858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 11 - 317
Target Start/End: Original strand, 15948730 - 15949036
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  15948730 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattccgtgatgccatttggagtatccaa 15948829  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||| |||    
T  15948830 tgcgccaggtgtctttatggaatatatgaatagaatatttcatccttatttggaccgatttgtggtggttttcatagatgatattttggtgtattcgaag 15948929  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  15948930 tctgaggaagagcatgttgagcatctgaggattgtgttgcaagtcttgaaagagaaccagttgtgagccaagttgtctaagtgtgaattttggttgaagg 15949029  T
Q  311 aagtgag 317  Q
    |||||||    
T  15949030 aagtgag 15949036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 199 - 338
Target Start/End: Original strand, 6710865 - 6711004
Alignment:
Q  199 gtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagt 298  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||||  || ||||| ||||| ||||||| ||| |||||||||||||||||||    
T  6710865 gtgtattcaaagtcagaggaggagcatgctgagcatttgaggattgtgttgcgtgttttgaaggagaatcagttgtttgctaagttgtctaagtgtgagt 6710964  T
Q  299 tttggttgaaggaagtgagtttccttggtcatgtgatttc 338  Q
    |||||||   ||||||||||||||||||| ||||||||||    
T  6710965 tttggttttgggaagtgagtttccttggttatgtgatttc 6711004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 256 - 351
Target Start/End: Complemental strand, 12795871 - 12795776
Alignment:
Q  256 ttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  12795871 ttgaaagagaaccaattgtgtgccaagttgtctaagtgtgagtcttggttgaaggaagtgagttttcttggtcatgtgatttctaagggtagtatt 12795776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 260 - 351
Target Start/End: Complemental strand, 16258774 - 16258683
Alignment:
Q  260 aagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    ||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16258774 aagagaatcagttgtgtgcaaagttgtctaagtgcgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatt 16258683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 107 - 339
Target Start/End: Complemental strand, 14088457 - 14088225
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| || ||||| || ||||| ||||| |||||| |||| |||||    |||||||| || ||||| ||||| |||||| | |||||    
T  14088457 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattc 14088358  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     |   |||||||||||||||| || ||| |||||||||| |||||||| |||||||||||  |||||| |||||| ||||| ||||| |||||||||||     
T  14088357 gagaactgaggaagagcatgcagaacatctgaggattgtattgcaagtattgaaagagaagaagttgtatgccaaattgtcaaagtgcgagttttggtta 14088258  T
Q  307 aaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  ||||||||||| ||||| ||| | ||||||    
T  14088257 agtgaagtgagttttcttggccatattatttct 14088225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 256 - 351
Target Start/End: Complemental strand, 18915361 - 18915266
Alignment:
Q  256 ttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    ||||| |||||| |||| ||||| |||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18915361 ttgaaggagaactagttatgtgctaagttgtccaagtgtgaattttggttgaaggaagtaagtttccttggtcatgtgatttctaagggtggtatt 18915266  T

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Target: chr3; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 256 - 350
Target Start/End: Original strand, 55514237 - 55514331
Alignment:
Q  256 ttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtat 350  Q
    ||||| ||||| || || ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  55514237 ttgaaggagaatcatttatgtgctaagttgtctaagtgtgagttttggttgcgggaagtgagtttccttggtcatgtgatttctaagggtggtat 55514331  T

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Target: chr3; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 107 - 339
Target Start/End: Original strand, 13970465 - 13970697
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| || ||||| || ||||| ||||| |||||| |||| |||||    |||||||| || ||||| ||||| |||||| | |||||    
T  13970465 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattc 13970564  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     |   |||||||||||||||| || ||| ||||| |||| |||||||| |||||||||||  |||||| |||||| ||||| ||||| |||||||||||     
T  13970565 gagaactgaggaagagcatgcagaacatctgagggttgtattgcaagtattgaaagagaagaagttgtatgccaaattgtcaaagtgcgagttttggtta 13970664  T
Q  307 aaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  ||||||||||| ||||| ||| | ||||||    
T  13970665 agtgaagtgagttttcttggccatattatttct 13970697  T

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Target: chr3; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 107 - 326
Target Start/End: Original strand, 11950253 - 11950472
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| || ||||| || |||||  |||| || ||| |||| |||||    || ||||| ||||| || ||||||||| || | |||||    
T  11950253 ctaatgcgcctggtgtgttcatggagtagatgaaccgaattttccatgcttacctggataaattcgtggttgtgtttattgatgatattctgatttattc 11950352  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     ||| |||| ||||||||||| || ||||||| ||||||||||||||| |||||||||||  |||||| ||| |||||||| ||||||||||| |||||     
T  11950353 taagactgaagaagagcatgcagaacatttgaagattgtgttgcaagtattgaaagagaagaagttgtatgctaagttgtcgaagtgtgagttctggtta 11950452  T
Q  307 aaggaagtgagtttccttgg 326  Q
    |  ||||||||||| |||||    
T  11950453 agtgaagtgagttttcttgg 11950472  T

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Target: chr3; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 109 - 339
Target Start/End: Complemental strand, 15261402 - 15261172
Alignment:
Q  109 aatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 208  Q
    |||||||||||||| |||||||| || |||||| | || |||||| | | | |||| ||||| ||||| || ||||| |||||||||||| | ||||| |    
T  15261402 aatgcgccaggtgtgtttatggagtacatgaatcgtatctttcatgcgtttttggatcgtttcgtggttgtattcatcgatgatattttgatatattcca 15261303  T
Q  209 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaa 308  Q
    || |||| ||||| |||||||||||||||| |||||| ||||||||  |||| |||||  || | | ||| || ||||  |||||||| || ||||||||    
T  15261302 agactgaagaagaacatgctgagcatttgaagattgttttgcaagtgctgaaggagaagaagctttatgctaaattgtaaaagtgtgaattctggttgaa 15261203  T
Q  309 ggaagtgagtttccttggtcatgtgatttct 339  Q
     || |||||||| ||||| ||||| ||||||    
T  15261202 agaggtgagttttcttggccatgttatttct 15261172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 169 - 339
Target Start/End: Complemental strand, 15340981 - 15340811
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || |||||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||| ||| |||||||||||      
T  15340981 tttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcgagtgttgaaagagaaga 15340882  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  | | |||||| ||||||||||||||||| |||||||| ||||||||||| ||||| ||||| ||||||    
T  15340881 aactttatgccaaattgtctaagtgtgagttctggttgaaagaagtgagttttcttggccatgttatttct 15340811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 169 - 339
Target Start/End: Original strand, 15400935 - 15401105
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || |||||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||| ||| |||||||||||      
T  15400935 tttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcgagtgttgaaagagaaga 15401034  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  | | |||||| ||||||||||||||||| |||||||| ||||||||||| ||||| ||||| ||||||    
T  15401035 aactttatgccaaattgtctaagtgtgagttctggttgaaagaagtgagttttcttggccatgttatttct 15401105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 107 - 326
Target Start/End: Complemental strand, 17188158 - 17187939
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| || ||||| || ||||| ||||| |||||| | ||| ||||    |||||||| || ||||| ||||| ||| || | |||||    
T  17188158 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcctatttggataaatttgtggttgtattcattgatgacattctgatttattc 17188059  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
    || | |||||||||||||||| || ||| |||  ||||| |||||||| |||||||||||  |||||| |||||| ||||| ||||||||||| |||||     
T  17188058 aaggactgaggaagagcatgcagaacatctgaaaattgtattgcaagtattgaaagagaaaaagttgtatgccaaattgtcgaagtgtgagttctggtta 17187959  T
Q  307 aaggaagtgagtttccttgg 326  Q
    |  ||||||||||| |||||    
T  17187958 agtgaagtgagttttcttgg 17187939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 118 - 339
Target Start/End: Complemental strand, 41179295 - 41179074
Alignment:
Q  118 ggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagg 217  Q
    ||||| || ||||| || |||||| |||| |||||| ||| ||||||    || |||||||| || || ||||||||| || | ||||| ||| |||| |    
T  41179295 ggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattctgatttattcgaagactgaag 41179196  T
Q  218 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgag 317  Q
    |||||||| | || ||| |||| |||||| ||||||| |||||||||||  |||||| |||||| ||||| || |||||||||||| | |  ||||||||    
T  41179195 aagagcattcagaacatctgagaattgtgctgcaagttttgaaagagaagaagttgtatgccaaattgtcgaaatgtgagttttggctaagtgaagtgag 41179096  T
Q  318 tttccttggtcatgtgatttct 339  Q
    ||||||||||||| | ||||||    
T  41179095 tttccttggtcatattatttct 41179074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 159 - 339
Target Start/End: Original strand, 20060462 - 20060642
Alignment:
Q  159 tctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| ||||| |||||| ||| |||||| |||||||| |||    
T  20060462 tctggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgccgagcatctgaagattgttttgcaagtgttg 20060561  T
Q  259 aaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    ||||||||  |  | | |||||| |||||||||||||| ||||||||||| ||||||||||| || || ||||| ||||||    
T  20060562 aaagagaagaaactttatgccaaattgtctaagtgtgaattttggttgaaagaagtgagttttctaggccatgttatttct 20060642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 169 - 339
Target Start/End: Complemental strand, 13254402 - 13254232
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||      
T  13254402 tttgtggttgtgtttatcgacgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 13254303  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    || | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  13254302 agctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 13254232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 169 - 338
Target Start/End: Original strand, 15346663 - 15346832
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||      
T  15346663 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 15346762  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 338  Q
    || | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| |||||    
T  15346763 agctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttc 15346832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 326
Target Start/End: Original strand, 12358967 - 12359091
Alignment:
Q  202 tattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtttt 301  Q
    ||||||||| |||| ||||||||||| || ||| ||| |||||| |||||||| |||||||||||  |||||| ||| |||||||| ||||||||||| |    
T  12358967 tattcaaagactgaagaagagcatgcagaacatctgaagattgtattgcaagtattgaaagagaaaaagttgtatgctaagttgtcgaagtgtgagttct 12359066  T
Q  302 ggttgaaggaagtgagtttccttgg 326  Q
    |||| |  ||||||||||| |||||    
T  12359067 ggttaagtgaagtgagttttcttgg 12359091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 107 - 254
Target Start/End: Original strand, 11889636 - 11889783
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||||||||| || |||||||| |||||| | || |||||| | ||| | || || || ||||| |||||||| |||||||||||| | || ||    
T  11889636 ctaatgcgccaggtgtgttcatggaatacatgaatcgtatttttcatgcgtatttagatcgcttcgtggttgtgttcattgatgatattttgatatactc 11889735  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagt 254  Q
     |||| | ||||||| |||||||||||||||| |||||| ||||||||    
T  11889736 taagtttaaggaagaacatgctgagcatttgaagattgttttgcaagt 11889783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 124 - 339
Target Start/End: Original strand, 15723307 - 15723522
Alignment:
Q  124 tttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagc 223  Q
    |||||||| || |||||| | || |||||| | | | |||| || |||||||| ||||| || |||||||||||| | || || ||| |||| ||||| |    
T  15723307 tttatggagtatatgaatcgcatctttcatgcatttttggatcggtttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaac 15723406  T
Q  224 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttcct 323  Q
    ||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||| || ||||| |||||||| || |||||||| ||||||||||| ||    
T  15723407 atgctgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatgctaaattgtcgaagtgtgaattctggttgaaagaagtgagttttct 15723506  T
Q  324 tggtcatgtgatttct 339  Q
     || ||||| ||||||    
T  15723507 aggccatgttatttct 15723522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 173 - 339
Target Start/End: Original strand, 16379339 - 16379505
Alignment:
Q  173 tggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagtt 272  Q
    ||||||| || || ||||||||| || | ||||| ||| || | ||||||||||| || ||| |||| |||||||||||||| |||||||| ||  ||||    
T  16379339 tggtggtatttattgatgatattctgatttattctaagacttaagaagagcatgcagaacatctgagaattgtgttgcaagtattgaaagaaaagaagtt 16379438  T
Q  273 gtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    || |||||| ||||| || |||||||||||| | |  ||||| ||||||||||||||| | ||||||    
T  16379439 gtatgccaaattgtcaaaatgtgagttttggctaagtgaagtaagtttccttggtcatattatttct 16379505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 280 - 350
Target Start/End: Complemental strand, 18751554 - 18751484
Alignment:
Q  280 aagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtat 350  Q
    |||||||| ||||||||||||| ||||  |||||||||||||||| |||||||||||||||||||||||||    
T  18751554 aagttgtcgaagtgtgagtttttgttgcgggaagtgagtttcctttgtcatgtgatttctaagggtggtat 18751484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 178 - 339
Target Start/End: Complemental strand, 6602439 - 6602278
Alignment:
Q  178 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 277  Q
    |||||||| || ||||||||| | || || ||| | || ||||| |||||||||||| ||| |||||| || ||||| |||||||||||  |  | | ||    
T  6602439 gtgttcatcgacgatattttgatttactccaagaccgaagaagaacatgctgagcatctgacgattgtcttacaagtgttgaaagagaagaaactttatg 6602340  T
Q  278 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    | || |||||||||||||| || |||||||| ||||||||||||||||| ||||| ||||||    
T  6602339 ctaaattgtctaagtgtgaattctggttgaatgaagtgagtttccttggccatgttatttct 6602278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 178 - 339
Target Start/End: Complemental strand, 10007303 - 10007142
Alignment:
Q  178 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 277  Q
    |||||||| || ||||||||| | || || ||| |||| ||||| ||| |||||||| ||| |||||| |||||||| |||||||||||  || | | ||    
T  10007303 gtgttcatcgacgatattttgatttactccaagactgaagaagaacattctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatg 10007204  T
Q  278 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    | || |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  10007203 ctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 10007142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 178 - 339
Target Start/End: Complemental strand, 16693867 - 16693706
Alignment:
Q  178 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 277  Q
    ||||| ||||| || |||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| || ||||| |||||||||||  |  | | ||    
T  16693867 gtgtttatagacgaaattttgatatactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatg 16693768  T
Q  278 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    | || ||||||||||||||||| |||||||| ||||| ||||| ||||||||||| ||||||    
T  16693767 ctaaattgtctaagtgtgagttctggttgaaagaagtaagttttcttggtcatgttatttct 16693706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 107 - 339
Target Start/End: Complemental strand, 13943808 - 13943576
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||| ||||| ||||| || ||||| || |||||| |||| |||||| ||| ||||||    || |||||||| || || ||||||||| || | |||||    
T  13943808 ctaacgcgcccggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattctgatttattc 13943709  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     ||| |||| ||||||||||| || ||| |||| ||| || ||||||| |||||||| |   |||||| ||||||  |||| || |||||||||||| |     
T  13943708 gaagactgaagaagagcatgcagaacatctgagaattatgctgcaagttttgaaagaaaggaagttgtatgccaaactgtcgaaatgtgagttttggcta 13943609  T
Q  307 aaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  ||||||||||||||||||||| | ||||||    
T  13943608 agtgaagtgagtttccttggtcatattatttct 13943576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 67 - 339
Target Start/End: Original strand, 15014072 - 15014344
Alignment:
Q  67 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggacc 166  Q
    |||||||| || || ||||| |||||||| || || ||  |||| ||||| || || ||||||||||| |||||| | || |||||| ||||| |||| |    
T  15014072 tatggacattacgaatattcggtgatgcctttcggtgttactaacgcgcctggagtgtttatggaatatatgaatcgtatttttcatgcttatttggatc 15014171  T
Q  167 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
    | ||||| || ||||| |||||||||||| |  | || || ||| | ||||| || ||||| |||||||  || ||||| ||||||||  |||| |||||    
T  15014172 gatttgttgttgtgtttatagatgatattctaatatactctaagaccgaggaggaacatgccgagcattgtagaattgttttgcaagtgctgaaggagaa 15014271  T
Q  267 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
      |||| | ||||||||| || ||||| || || |||||||| ||||||||||| ||||| ||| | ||||||    
T  15014272 gaagttatatgccaagttatcgaagtgcgaattctggttgaacgaagtgagttttcttggccatattatttct 15014344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 187 - 339
Target Start/End: Complemental strand, 17491544 - 17491392
Alignment:
Q  187 gatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 286  Q
    |||||||||||  | || || |||||||| ||||| |||||||||||||||| | | || |||||||| |||||||||||  || | | ||| || ||||    
T  17491544 gatgatattttaatttactccaagtctgaagaagaacatgctgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcgaaattgt 17491445  T
Q  287 ctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |||||||||| || |||||||| |||||||| || ||||| ||||| ||||||    
T  17491444 ctaagtgtgaattctggttgaaagaagtgagctttcttggacatgttatttct 17491392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 212 - 326
Target Start/End: Complemental strand, 12180017 - 12179903
Alignment:
Q  212 ctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagga 311  Q
    |||| ||||||||||| |||||| ||| ||||||||||||| | |||||||| ||  |||||| ||| |||||||| ||||||||||| ||||| |  ||    
T  12180017 ctgaagaagagcatgcagagcatctgaagattgtgttgcaaatattgaaagaaaagaagttgtatgctaagttgtcgaagtgtgagttctggttaattga 12179918  T
Q  312 agtgagtttccttgg 326  Q
    ||||||||| |||||    
T  12179917 agtgagttttcttgg 12179903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 339
Target Start/End: Complemental strand, 10907913 - 10907752
Alignment:
Q  178 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 277  Q
    |||||||| || ||||||||| | || || ||| |||| ||||| |||  ||||||| ||| |||||| |||||||| |||||||||||  || | | ||    
T  10907913 gtgttcatcgacgatattttgatttactccaagactgaagaagaacattttgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatg 10907814  T
Q  278 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    | || |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  10907813 ctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 10907752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 107 - 296
Target Start/End: Complemental strand, 15229387 - 15229198
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    ||||||||||  |||| ||||||||||| ||||||||||  || ||| ||||||| ||    |||||||| ||||| || |||||||| ||  | |||||    
T  15229387 ctaatgcgcctagtgtgtttatggaatacatgaatagaactttccatgcttatctagataaatttgtggttgtgtttattgatgatatcttaatttattc 15229288  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtga 296  Q
     ||| |||| ||||||||||| |||||| |||  ||| |||||||||| |||||||| ||  |||||| ||||| |||||| || |||||    
T  15229287 taagactgaagaagagcatgcagagcatctgaaaattatgttgcaagtgttgaaagaaaagaagttgtatgccatgttgtccaaatgtga 15229198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 107 - 296
Target Start/End: Complemental strand, 15235255 - 15235066
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    ||||||||||  |||| ||||||||||| ||||||||||  || ||| ||||||| ||    |||||||| ||||| || |||||||| ||  | |||||    
T  15235255 ctaatgcgcctagtgtgtttatggaatacatgaatagaactttccatgcttatctagataaatttgtggttgtgtttattgatgatatcttaatttattc 15235156  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtga 296  Q
     ||| |||| ||||||||||| |||||| |||  ||| |||||||||| |||||||| ||  |||||| ||||| |||||| || |||||    
T  15235155 taagactgaagaagagcatgcagagcatctgaaaattatgttgcaagtgttgaaagaaaagaagttgtatgccatgttgtccaaatgtga 15235066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 339
Target Start/End: Complemental strand, 16637464 - 16637315
Alignment:
Q  190 gatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtcta 289  Q
    ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| || ||||| |||||||||||  || | | ||| || |||||||    
T  16637464 gatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaagctttatgctaaattgtcta 16637365  T
Q  290 agtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    ||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  16637364 agtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 16637315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 339
Target Start/End: Original strand, 16834950 - 16835087
Alignment:
Q  202 tattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtttt 301  Q
    ||||| ||| |||| || |||||||| || ||| |||||||||| |||||||| |||||||| ||  |||||| |||||| ||||| || ||||||||||    
T  16834950 tattctaagactgacgaggagcatgcagaacatctgaggattgtattgcaagtattgaaagaaaagaagttgtatgccaaattgtcaaaatgtgagtttt 16835049  T
Q  302 ggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    || | |  ||||||||||||||||| ||| | ||||||    
T  16835050 ggctaagtgaagtgagtttccttggccatattatttct 16835087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 339
Target Start/End: Complemental strand, 48427138 - 48426989
Alignment:
Q  190 gatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtcta 289  Q
    ||||||||| | || || ||| |||| ||||| ||||| |||||| ||| |||||| |||||||| |||||||||||  || | | ||| || |||||||    
T  48427138 gatattttgatctactccaagactgaagaagaacatgccgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtcta 48427039  T
Q  290 agtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    ||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  48427038 agtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 48426989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 338
Target Start/End: Original strand, 5109038 - 5109198
Alignment:
Q  178 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 277  Q
    |||||||| || ||||| ||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||| ||  || | | ||    
T  5109038 gtgttcatcgacgatatcttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagaaaagaagctttatg 5109137  T
Q  278 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 338  Q
    | || |||||||||||||| || |||||||| ||||||||||| || || ||||| |||||    
T  5109138 ctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttc 5109198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 338
Target Start/End: Complemental strand, 12888412 - 12888252
Alignment:
Q  178 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 277  Q
    |||||||| |||||||||||| | || || ||| |||| ||||| ||||| |||||  ||| |||||| || ||||| |||||||||||  |  | | ||    
T  12888412 gtgttcatcgatgatattttgatttactccaagactgaagaagaacatgccgagcacctgaagattgtcttacaagtgttgaaagagaagaaactttatg 12888313  T
Q  278 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 338  Q
    | || |||||||||||||| || |||||||| ||||||||||| ||||| ||||| |||||    
T  12888312 caaaattgtctaagtgtgaattctggttgaaagaagtgagtttacttggccatgttatttc 12888252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 339
Target Start/End: Original strand, 14874935 - 14875087
Alignment:
Q  187 gatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 286  Q
    |||||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||| || || |    
T  14874935 gatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattat 14875034  T
Q  287 ctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    ||||||||||||| |||||||| ||||| ||||| ||||| | ||| ||||||    
T  14875035 ctaagtgtgagttctggttgaaagaagtaagttttcttggccttgttatttct 14875087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 339
Target Start/End: Original strand, 15587800 - 15587980
Alignment:
Q  159 tctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| || |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| || ||||| |||    
T  15587800 tctggatcggtttgtggttgtgtttatcgacgatattttgatctactccaagactgaagaagaacatgttgagcatctgaagattgtcttacaagtgttg 15587899  T
Q  259 aaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    ||||||||  |  | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  15587900 aaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 15587980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 107 - 339
Target Start/End: Complemental strand, 44779031 - 44778799
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||| ||||| ||||| || ||||| |  |||||| |||| |||||| ||| ||||||    || |||||||| || || ||||| ||| || | |||||    
T  44779031 ctaacgcgcccggtgtattcatggagtttatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgacattctgatttattc 44778932  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     ||| |||| ||||||||||| || ||| |||| |||||||||||||| |||||||| |   | |||| ||||||  |||| || |||||||||||| |     
T  44778931 gaagactgaagaagagcatgcagaacatctgagaattgtgttgcaagttttgaaagaaaggaaattgtatgccaaactgtcgaaatgtgagttttggcta 44778832  T
Q  307 aaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  ||||||||||||||||||||| | ||||||    
T  44778831 agtgaagtgagtttccttggtcatattatttct 44778799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 329
Target Start/End: Original strand, 11959514 - 11959736
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| ||||||||||| |||||||| || || ||| ||| ||||||    ||| | || ||||| || |||||||||||  | |||||    
T  11959514 ctaatgcgcctggtgtgtttatggaatatatgaataggattttccatgcttttctggataaatttctagttgtgtttattgatgatattttaatctattc 11959613  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     |||  ||| || |||||||| |||||| |||| ||||| |||||||| |||||||| ||   ||||| ||| |||||||| || ||||| || |||||     
T  11959614 caagaatgaagaggagcatgcagagcatctgagaattgtattgcaagttttgaaagaaaagaggttgtatgcaaagttgtcaaaatgtgaattctggtta 11959713  T
Q  307 aaggaagtgagtttccttggtca 329  Q
    |  ||||||||||| || |||||    
T  11959714 agtgaagtgagttttctgggtca 11959736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 339
Target Start/End: Original strand, 16328067 - 16328237
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    ||||| |||||||| || |||||||||||  | ||||| |||  ||| || |||||||| |||||| |||| ||||| |||||||  |||||||||||      
T  16328067 tttgttgtggtgtttattgatgatattttaatctattctaagaatgaagaggagcatgcagagcatctgagaattgtattgcaagatttgaaagagaaga 16328166  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
     ||||| ||| |||||||| || |||||||| ||||| |  ||||||||||| || |||||| | ||||||    
T  16328167 ggttgtatgcaaagttgtcaaaatgtgagttatggttaagtgaagtgagttttctgggtcatattatttct 16328237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 329
Target Start/End: Complemental strand, 28756102 - 28755880
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || |||||  |||| || ||| ||| ||||||    ||||| |||||||| || |||||||| ||  | |||||    
T  28756102 ctaatgcgccgggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatatcttaatttattc 28756003  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     |||  |||||| |||||||| |||||| |||| |||||||||||||| ||||| || ||   ||||| ||| ||||| || || |||||||| |||||     
T  28756002 caagaatgaggaggagcatgcagagcatctgagaattgtgttgcaagtgttgaaggaaaagaggttgtatgctaagttatcaaaatgtgagttctggtta 28755903  T
Q  307 aaggaagtgagtttccttggtca 329  Q
    || ||||| ||||| || |||||    
T  28755902 aatgaagtaagttttctgggtca 28755880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 338
Target Start/End: Original strand, 53383439 - 53383605
Alignment:
Q  172 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 271  Q
    ||||| |||||||| || ||||||||| | || || ||| |||| ||||| ||||| || ||| ||| |||||| || || || |||||||||||  |      
T  53383439 gtggttgtgttcatcgacgatattttgatttactccaagactgaagaagaacatgcggaacatctgaagattgtcttacaggtgttgaaagagaagaaac 53383538  T
Q  272 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 338  Q
    | | ||| || |||||||||||||| || |||||||| ||||||||||||||||| ||||| |||||    
T  53383539 tttatgctaaattgtctaagtgtgaattctggttgaatgaagtgagtttccttggccatgttatttc 53383605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 223 - 340
Target Start/End: Original strand, 16805419 - 16805536
Alignment:
Q  223 catgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttcc 322  Q
    |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||| || |||||||||||||| || |||||||| ||||| ||||| |    
T  16805419 catgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtaagttttc 16805518  T
Q  323 ttggtcatgtgatttcta 340  Q
    |||| ||||| |||||||    
T  16805519 ttggccatgttatttcta 16805536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 338
Target Start/End: Complemental strand, 3687646 - 3687486
Alignment:
Q  178 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 277  Q
    |||||||| || ||||||||| | || || ||| |||| ||||| ||||| |||||| ||| |||||| || ||||| |||||||||||  |  | | ||    
T  3687646 gtgttcatcgacgatattttgatttactccaagactgaagaagaacatgcagagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatg 3687547  T
Q  278 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 338  Q
    | || || ||||||||||| || |||||||| ||||||||||| || |||||||| |||||    
T  3687546 ctaaattatctaagtgtgaattctggttgaaagaagtgagttttctaggtcatgttatttc 3687486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 173 - 257
Target Start/End: Complemental strand, 55498570 - 55498486
Alignment:
Q  173 tggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtctt 257  Q
    |||||||||| || |||||||| || |||||||| ||||| |||||  ||||||| |||||||| ||||||||||||||| ||||    
T  55498570 tggtggtgtttatcgatgatatcttagtgtattcgaagtcggaggagcagcatgcagagcatttcaggattgtgttgcaaatctt 55498486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 338
Target Start/End: Original strand, 5423358 - 5423517
Alignment:
Q  179 tgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgc 278  Q
    ||||||| || ||||| ||| | || || ||| |||| ||||| ||||| |||||| ||| |||||| || ||||| |||||||||||  |  | | |||    
T  5423358 tgttcatcgacgatatcttgatttactctaagactgaagaagaacatgccgagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgc 5423457  T
Q  279 caagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 338  Q
     || |||||||||||||| || | |||||| ||||||||||||||||| ||||| |||||    
T  5423458 taaattgtctaagtgtgaattcttgttgaatgaagtgagtttccttggccatgttatttc 5423517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 320
Target Start/End: Original strand, 10418452 - 10418603
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    ||||||||||| || ||||||||||| ||| | ||||||||  |||| || || || || || ||  ||| ||||||||||||| | ||||||||||       
T  10418452 tttgtggtggtatttatagatgatatcttgatctattcaaaaactgaagaggaacacgccgaacacctgaagattgtgttgcaaatattgaaagagagga 10418551  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagttt 320  Q
    |||||| ||||||| |||| ||||| ||||| ||||| || |||||||||||    
T  10418552 agttgtatgccaagctgtcgaagtgcgagttctggttaaatgaagtgagttt 10418603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 326
Target Start/End: Original strand, 31693530 - 31693749
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || |||||  |||| || ||| ||||||||||    || ||||| || || || ||||| ||  || | ||||     
T  31693530 ctaatgcgcctggtgtgtttatggagtatatgaactgaattttccatgcttatctggataaattcgtggttgtatttattgatgacatactgatttattt 31693629  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
    |||| |||| ||||||||||| || ||| ||| |||||| |||||||| |||||||| ||  |||||| ||| |||||||| || |||||||| |||||     
T  31693630 aaagactgaagaagagcatgcagaacatctgaagattgtattgcaagttttgaaagaaaagaagttgtatgctaagttgtcaaaatgtgagttctggtta 31693729  T
Q  307 aaggaagtgagtttccttgg 326  Q
    |  ||||| ||||| |||||    
T  31693730 agtgaagtaagttttcttgg 31693749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 339
Target Start/End: Complemental strand, 12499939 - 12499790
Alignment:
Q  190 gatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtcta 289  Q
    ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||| ||||||  |  | | ||| || || ||||    
T  12499939 gatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgatagagaagaaactttatgctaaattatcta 12499840  T
Q  290 agtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |||||||||| |||||||| || || ||||| ||||| ||||| ||||||    
T  12499839 agtgtgagttctggttgaaagaggtaagttttcttggccatgttatttct 12499790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 338
Target Start/End: Original strand, 16755119 - 16755288
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| ||||| || ||||||| |||||| || ||||| |||||||||||      
T  16755119 tttgtggttgtgtttattgacgatattttgatttactccaagactgaagaagaacatgcggaacatttgaagattgttttacaagtgttgaaagagaaga 16755218  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 338  Q
    |  | | ||| || |||| |  |||||| || |||||||| ||||||||||||||||| ||||| |||||    
T  16755219 aactttatgctaaattgtttgtgtgtgaattctggttgaatgaagtgagtttccttggccatgttatttc 16755288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 305
Target Start/End: Complemental strand, 10385393 - 10385257
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    ||||| ||||||||||| |||||||| ||| | ||||| |||   |||||||||||||| | |||| |||| ||||| |||||||| ||||| || ||      
T  10385393 tttgttgtggtgttcattgatgatatcttgatttattccaagaacgaggaagagcatgcagggcatctgagaattgtattgcaagtgttgaaggaaaaga 10385294  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggtt 305  Q
     ||||| ||| |||||||| || |||||||| |||||    
T  10385293 ggttgtatgctaagttgtcaaaatgtgagttctggtt 10385257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 88 - 320
Target Start/End: Original strand, 13318828 - 13319060
Alignment:
Q  88 gtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatag 187  Q
    ||||||||||| || ||  |||||||||| ||||| || ||||| || |||||  |||| |||||| ||| ||||||    ||||||||||| || || |    
T  13318828 gtgatgccattcggtgttactaatgcgcctggtgtgttcatggagtatatgaaccgaatttttcatgcttttctggataaatttgtggtggtatttattg 13318927  T
Q  188 atgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtc 287  Q
    ||||||||||  | ||||| ||| || | || |||||||| || ||| ||| |||| |||||||| | ||||||||||   | |||| ||| || |||||    
T  13318928 atgatattttaatttattccaagactaaagaggagcatgcagaacatctgaagattatgttgcaaattttgaaagagagaaatttgtatgctaaattgtc 13319027  T
Q  288 taagtgtgagttttggttgaaggaagtgagttt 320  Q
     ||||| ||||| ||||| |  |||||||||||    
T  13319028 gaagtgcgagttctggttaagtgaagtgagttt 13319060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 350
Target Start/End: Complemental strand, 13952377 - 13952283
Alignment:
Q  256 ttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtat 350  Q
    ||||| |||||  |||||| ||| |||| ||| |||||||||||||||||| |  |||||||||| |||  |||||||||||| ||| |||||||    
T  13952377 ttgaaggagaagaagttgtttgctaagtcgtcaaagtgtgagttttggttgcaaaaagtgagttttcttaatcatgtgatttcgaagagtggtat 13952283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 107 - 260
Target Start/End: Complemental strand, 47125728 - 47125575
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || |||||  |||| || ||| ||| ||||||    ||||| |||||||| || ||||||||| |  | |||||    
T  47125728 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattctaatctattc 47125629  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 260  Q
     |||  |||||| |||||||| |||||| |||| || ||||||||||| |||||    
T  47125628 caagaatgaggaggagcatgcagagcatctgagaatagtgttgcaagtgttgaa 47125575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 252
Target Start/End: Complemental strand, 55498734 - 55498665
Alignment:
Q  183 catagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaa 252  Q
    |||||||||||| || ||||||| |||||| ||||| |||| ||  ||||||||||||||| ||||||||    
T  55498734 catagatgatatcttagtgtattgaaagtcggaggaggagcttgtggagcatttgaggattttgttgcaa 55498665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 321; Significance: 0; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 11 - 351
Target Start/End: Original strand, 20829485 - 20829825
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20829485 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 20829584  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20829585 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 20829684  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20829685 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 20829784  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  20829785 aagtgagtttccttggtcatgtgatttctaagggtggtatt 20829825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 11 - 339
Target Start/End: Complemental strand, 20927320 - 20926992
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20927320 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 20927221  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  20927220 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacagttttgtggtggtgttcatagatgatattttggtgtattcgaag 20927121  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||| ||||| ||||| |||||||||||||||||||||||||    
T  20927120 tctgaggaagagcatgatgagcatttgaggattgtgttgcaagtcttgaaggagaatcagttatgtgctaagttatctaagtgtgagttttggttgaagg 20927021  T
Q  311 aagtgagtttccttggtcatgtgatttct 339  Q
    |||||| |||||||||||| |||||||||    
T  20927020 aagtgattttccttggtcacgtgatttct 20926992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 11 - 350
Target Start/End: Original strand, 41215949 - 41216288
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| ||||||| | | |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||    
T  41215949 atcatcagattagagtgaaggtgtaagatatatccaaaaccgcgttccgaacgaggtatggaaactatgagtattctgtgatgccatttggagtatccaa 41216048  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    |||||||||||| || ||| |||| |||||||||||||||||||||| ||||||||||||| |||||||||| || |||||||||||||||||||| |||    
T  41216049 tgcgccaggtgttttcatgcaatatatgaatagaatatttcatccttttctggaccgttttatggtggtgtttattgatgatattttggtgtattcgaag 41216148  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||   ||| ||| | |||||||| ||||||||||||||||||  ||    
T  41216149 tctgaggaggagcatgctgagcatttgaggattgtgttgcgagtcttgaaggagaattggttatgttctaagttgtcgaagtgtgagttttggttgcggg 41216248  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtat 350  Q
    |||||||||||||| ||||| |||||||||||||| ||||    
T  41216249 aagtgagtttccttagtcatatgatttctaagggtagtat 41216288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 33 - 350
Target Start/End: Original strand, 21200994 - 21201311
Alignment:
Q  33 ggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaa 132  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||| | ||  ||||| ||||  ||||||| ||||||    
T  21200994 ggaggatatatccaaaactgcgttccgaacgagatatggtcactatgaatattctgtgatgccatttagtgtgactaatacgccgagtgtcttcatggaa 21201093  T
Q  133 taaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagc 232  Q
    || ||||||||||||||||||||||||||| || | ||||||| ||  || ||||||||||| ||||||||||| ||||  ||||| ||||||| | |||    
T  21201094 tatatgaatagaatatttcatccttatctgtactggtttgtggaggcttttatagatgatatcttggtgtattcgaagttggaggaggagcatgttaagc 21201193  T
Q  233 atttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgt 332  Q
    || ||||||||||||||||   |||||| || ||  |||||| ||| || ||||| |||||||| |||||| || |||||||||| || | |||||||||    
T  21201194 atctgaggattgtgttgcataccttgaaggataagaagttgtttgctaacttgtcgaagtgtgaattttggctgcaggaagtgagcttacctggtcatgt 21201293  T
Q  333 gatttctaagggtggtat 350  Q
    |||||| | |||||||||    
T  21201294 gatttcgatgggtggtat 21201311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 11 - 182
Target Start/End: Complemental strand, 20527319 - 20527148
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    |||||| |||||| |||||||| || |||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20527319 atcatctgattagagtgaaggcagaagataaatccaaaaccgcattccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 20527220  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgtt 182  Q
    ||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  20527219 tgcaccaggtgtctttatagaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgtt 20527148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 22133857 - 22133963
Alignment:
Q  19 attagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccag 118  Q
    ||||| || |||||||| ||||||||||| || |||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22133857 attagagtaaaggcggaagatatatccaagaccgcgttatgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaatgcgccag 22133956  T
Q  119 gtgtctt 125  Q
    |||||||    
T  22133957 gtgtctt 22133963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 340
Target Start/End: Original strand, 51331744 - 51331915
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| ||||| |||||| ||| |||||| |||||||| |||||||||||      
T  51331744 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgcggagcatctgaagattgttttgcaagtgttgaaagagaaga 51331843  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttcta 340  Q
    |||| | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| |||||||    
T  51331844 agttttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttcta 51331915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 107 - 305
Target Start/End: Original strand, 21743741 - 21743939
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || ||||| ||||| || ||| ||||||||||    |||||||| ||||| || ||| | || ||  | |||||    
T  21743741 ctaatgcgcctggtgtgtttatggagtatatgaacagaattttccatgcttatctggataaatttgtggttgtgtttattgatcacatcttaatttattc 21743840  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggtt 305  Q
     ||| |||| ||||||||||| |||||| ||| |||||| |||||||| |||||||| ||  |||||| |||||||||||| || |||||||| |||||    
T  21743841 taagactgaagaagagcatgcagagcatctgaagattgtattgcaagtgttgaaagaaaagaagttgtatgccaagttgtccaaatgtgagttctggtt 21743939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 169 - 339
Target Start/End: Complemental strand, 21839058 - 21838888
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || |||||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||      
T  21839058 tttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 21838959  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  21838958 aactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 21838888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 178 - 339
Target Start/End: Complemental strand, 19108467 - 19108306
Alignment:
Q  178 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 277  Q
    ||||| || |||||||||||| | || || ||| ||||  |||| |||||||||||| ||| |||||| || ||||| |||||||||||  |  | | ||    
T  19108467 gtgtttatcgatgatattttgatttactctaagactgaaaaagaacatgctgagcatctgaagattgtcttccaagtgttgaaagagaagaaactttatg 19108368  T
Q  278 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |||| ||||||||||||||||| |||||||| ||||||||||| ||||| ||||| ||||||    
T  19108367 ccaaattgtctaagtgtgagttctggttgaaagaagtgagttttcttggccatgttatttct 19108306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 169 - 338
Target Start/End: Original strand, 33389280 - 33389449
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||      
T  33389280 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 33389379  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 338  Q
    || | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| |||||    
T  33389380 agctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttc 33389449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 35930918 - 35930987
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatga 80  Q
    ||||||||||||| ||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||    
T  35930918 atcatcagattagagtgaaggcggaagatatatccaaaaccacgttccgaacgaggtatggacactatga 35930987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 169 - 339
Target Start/End: Complemental strand, 21832410 - 21832240
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||      
T  21832410 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 21832311  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  21832310 aactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 21832240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 172 - 305
Target Start/End: Original strand, 20834154 - 20834287
Alignment:
Q  172 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 271  Q
    ||||| ||||| || ||||||||| || | ||||||||| |||| ||||| ||||| || ||||||| ||||||||||||| | |||||||||||   ||    
T  20834154 gtggttgtgtttattgatgatattctgatttattcaaagactgaagaagaacatgcagaacatttgaagattgtgttgcaaattttgaaagagaaaaggt 20834253  T
Q  272 tgtgtgccaagttgtctaagtgtgagttttggtt 305  Q
    ||| ||| |||||||| ||||||||||| |||||    
T  20834254 tgtatgctaagttgtcgaagtgtgagttctggtt 20834287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 339
Target Start/End: Original strand, 430370 - 430537
Alignment:
Q  172 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 271  Q
    ||||| || ||||| |||||||||||| | || || |||||||| ||||| |||||||||||||||| | | || |||||||| |||||||||||  ||     
T  430370 gtggttgttttcattgatgatattttgatttactccaagtctgaagaagaacatgctgagcatttgaagctggttttgcaagtgttgaaagagaagaagc 430469  T
Q  272 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    | | ||| || || ||||||||||| || ||||| || |||||||| || ||||| ||||| ||||||    
T  430470 tttatgcgaaattatctaagtgtgaattctggttaaaagaagtgagctttcttgggcatgttatttct 430537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 339
Target Start/End: Complemental strand, 20140236 - 20140021
Alignment:
Q  124 tttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagc 223  Q
    |||||||| || |||||| | || |||||| | | | |||| |||||| |||| || ||||| |||||||||||| | || || ||| |||| ||||| |    
T  20140236 tttatggagtacatgaatcgcatctttcatgcatttttggatcgttttttggttgttttcattgatgatattttgatttactccaagactgaagaagaac 20140137  T
Q  224 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttcct 323  Q
    ||||||| || |||| |||||| |||||||| |||||||| ||  || | | ||| || |||||||||||||| || ||||||||  ||||||| || ||    
T  20140136 atgctgatcacttgaagattgttttgcaagtgttgaaagaaaagaagctctatgctaaattgtctaagtgtgaattctggttgaaaaaagtgagctttct 20140037  T
Q  324 tggtcatgtgatttct 339  Q
    ||| ||||| ||||||    
T  20140036 tggccatgttatttct 20140021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 169 - 339
Target Start/End: Original strand, 20855011 - 20855181
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    ||||||||||| || ||||||||||||||| | ||||| ||  |||| || |||||||| || || |||| ||||||||||||  | ||||| ||||       
T  20855011 tttgtggtggtatttatagatgatattttgatttattctaaaactgaagaggagcatgcagaacacttgaagattgtgttgcagattttgaaggagagaa 20855110  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |||||| |||||||||||| ||||| ||||| ||||| |  ||||||||||| || || ||||| ||||||    
T  20855111 agttgtatgccaagttgtcgaagtgcgagttctggttaagtgaagtgagttttctaggccatgttatttct 20855181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 65 - 339
Target Start/End: Complemental strand, 21751152 - 21750878
Alignment:
Q  65 ggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctgga 164  Q
    |||||||||| |||||||||   || ||||| ||||| ||  ||||||| |  || || |||||||| || |||||| | || |||||| | | | ||||    
T  21751152 ggtatggacattatgagtataaagttatgccttttggtgttactaatgctcttggagtatttatggagtacatgaatcgcatctttcatgcatttttgga 21751053  T
Q  165 ccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagag 264  Q
     ||||| ||||| || ||||| |||||||||||  | || || |||||||| ||||| |||||||||||||||| | | || |||||||| |||||| ||    
T  21751052 tcgtttcgtggttgttttcattgatgatattttaatttactccaagtctgaagaagaacatgctgagcatttgaagttggttttgcaagtgttgaaaaag 21750953  T
Q  265 aaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    ||  || | | ||| || |||||||||||||| || ||||| || ||||| | ||| ||||| ||||| ||||||    
T  21750952 aagaagctttatgctaaattgtctaagtgtgaattctggttaaaagaagtaatttttcttggacatgttatttct 21750878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 172 - 338
Target Start/End: Original strand, 41351916 - 41352082
Alignment:
Q  172 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 271  Q
    ||||| |||||||| || ||||||||| | || || ||| |||| ||||| ||||| || ||| ||| |||||| || ||||| |||||||||||  |      
T  41351916 gtggttgtgttcatcgacgatattttgatttactccaagactgaagaagaacatgcagaacatctgaagattgtcttacaagtgttgaaagagaagaaac 41352015  T
Q  272 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 338  Q
    | | ||| || |||||||||||||| || |||||||| ||||||||||| ||||||||||| |||||    
T  41352016 tttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttcttggtcatgttatttc 41352082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 339
Target Start/End: Complemental strand, 41308748 - 41308611
Alignment:
Q  202 tattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtttt 301  Q
    ||||| ||| |||| ||||||||||| |||||| ||| |||||| |||||||| |||||||| ||  |||||| |||||||||||| || ||||| ||||    
T  41308748 tattctaagactgaagaagagcatgcagagcatctgaagattgtattgcaagtgttgaaagaaaagaagttgtatgccaagttgtccaaatgtgaatttt 41308649  T
Q  302 ggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |||| |  ||||| ||||| ||||| ||| | ||||||    
T  41308648 ggttaagtgaagtaagttttcttggccatattatttct 41308611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 338
Target Start/End: Original strand, 16348856 - 16349016
Alignment:
Q  178 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 277  Q
    |||||||| || ||||||||| | || || ||| |||| ||||| ||||| |||||| ||| |||||| || ||||| |||||||||||  |  | | ||    
T  16348856 gtgttcatcgacgatattttgatttactccaagactgaagaagaacatgcagagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatg 16348955  T
Q  278 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 338  Q
    | || |||||||||||||| || |||||||| ||||||||||| || |||||||| |||||    
T  16348956 ctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggtcatgttatttc 16349016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 337
Target Start/End: Original strand, 21862616 - 21862792
Alignment:
Q  161 tggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 260  Q
    |||||||||| ||||| || || || ||||| |||||  | || || ||| |||||||||| |||||||||||||||| ||| || |||||||| || ||    
T  21862616 tggaccgtttcgtggttgtttttattgatgacattttaatttactccaagactgaggaagaacatgctgagcatttgaagatggttttgcaagtgttcaa 21862715  T
Q  261 agagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgattt 337  Q
    ||||||  || | | ||| || || ||||||||||| || |||||||| || |||||||| ||||| ||||| ||||    
T  21862716 agagaagaagctttatgctaaattatctaagtgtgaattctggttgaaagaggtgagttttcttggacatgttattt 21862792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 339
Target Start/End: Complemental strand, 21026269 - 21026111
Alignment:
Q  181 ttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgcca 280  Q
    ||||| |||||||||||  | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||| |    
T  21026269 ttcatcgatgatattttaatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgcta 21026170  T
Q  281 agttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  | |||||||||||||| |||||||| |||||||||||  |||| ||||| ||||||    
T  21026169 aaatatctaagtgtgagttctggttgaaagaagtgagtttttttggccatgttatttct 21026111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 329
Target Start/End: Original strand, 31538186 - 31538408
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || |||||  |||| || ||| ||| ||||||    ||||| |||||||| || |||||||||||  | |||||    
T  31538186 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 31538285  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     |||  |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||   ||||| ||| ||||| || || |||||||| |||||     
T  31538286 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaaggaaaagaggttgtatgctaagttatcaaaatgtgagttctggtta 31538385  T
Q  307 aaggaagtgagtttccttggtca 329  Q
    || ||||| ||||| || |||||    
T  31538386 aatgaagtaagttttctgggtca 31538408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 329
Target Start/End: Complemental strand, 48425074 - 48424852
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || |||||  |||| || ||| ||| ||||||    ||||| |||||||| || |||||||||||  | |||||    
T  48425074 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 48424975  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     |||  |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||   ||||| ||| ||||| || || |||||||| |||||     
T  48424974 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaaggaaaagaggttgtatgctaagttatcaaaatgtgagttctggtta 48424875  T
Q  307 aaggaagtgagtttccttggtca 329  Q
    || ||||| ||||| || |||||    
T  48424874 aatgaagtaagttttctgggtca 48424852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 329
Target Start/End: Complemental strand, 52987942 - 52987720
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || |||||  |||| || ||| ||| ||||||    ||||| |||||||| || |||||||||||  | |||||    
T  52987942 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 52987843  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     |||  |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||   ||||| ||| ||||| || || |||||||| |||||     
T  52987842 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaaggaaaagaggttgtatgctaagttatcaaaatgtgagttctggtta 52987743  T
Q  307 aaggaagtgagtttccttggtca 329  Q
    || ||||| ||||| || |||||    
T  52987742 aatgaagtaagttttctgggtca 52987720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 178 - 339
Target Start/End: Original strand, 17043275 - 17043436
Alignment:
Q  178 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 277  Q
    ||||| || |||||||||||| | || || ||| || | ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||    
T  17043275 gtgtttatcgatgatattttgatttactccaagactaaagaagaacatgctgagcatatgaagattgtcttgcaagtattgaaagagaagaaactttatg 17043374  T
Q  278 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    | || ||||| |||||||| || |||||||| ||||| ||||| ||||| ||||| ||||||    
T  17043375 ctaaattgtcaaagtgtgaattctggttgaaagaagtaagttttcttggccatgttatttct 17043436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 166 - 339
Target Start/End: Original strand, 50618646 - 50618819
Alignment:
Q  166 cgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagaga 265  Q
    ||||| ||||| || ||||| ||||| |||||| | || || ||| |||||||||| |||| ||||||||||| || ||| |||||||| ||||||||||    
T  50618646 cgtttcgtggttgttttcattgatgacattttgatttactccaagactgaggaagaacatgttgagcatttgaagactgttttgcaagtgttgaaagaga 50618745  T
Q  266 accagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  |  | | ||| || || || |||||||| || |||||||| || |||||||| ||||| ||||| ||||||    
T  50618746 agaaactttatgctaaattatcaaagtgtgaattctggttgaaagaggtgagttttcttggacatgttatttct 50618819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 187 - 339
Target Start/End: Original strand, 24792885 - 24793037
Alignment:
Q  187 gatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 286  Q
    |||||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||| ||  |  | | ||| || || |    
T  24792885 gatgatattttgatttactccaagactgaagaagaacatgttgagcatctgaagattgtcttgcaagtgttgaaagaaaagaaactttatgctaaattat 24792984  T
Q  287 ctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    ||||||||||||| |||||||| ||||| ||||| ||||| ||||| ||||||    
T  24792985 ctaagtgtgagttctggttgaaagaagtaagttttcttggccatgttatttct 24793037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 339
Target Start/End: Original strand, 21234025 - 21234152
Alignment:
Q  212 ctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagga 311  Q
    |||| ||||| |||||||| ||| ||| |||||| |||||||| |||||||||||  |  | | ||| || |||||||||||||| || |||||||| ||    
T  21234025 ctgaagaagaacatgctgaacatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaaga 21234124  T
Q  312 agtgagtttccttggtcatgtgatttct 339  Q
    ||| ||||| ||||| ||||| ||||||    
T  21234125 agtaagttttcttggccatgttatttct 21234152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 329
Target Start/End: Original strand, 24097857 - 24098014
Alignment:
Q  172 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 271  Q
    |||||||| || || ||||| ||| || | ||||| ||| |||| || |||||||| ||  || ||| |||||| ||| ||||||||||||| ||  |||    
T  24097857 gtggtggtatttattgatgacattctgatctattctaagactgaagaggagcatgcagaaaatctgaagattgtattgtaagtcttgaaagaaaagaagt 24097956  T
Q  272 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtca 329  Q
    ||| ||| |||||||| ||||||||||| ||||| |  ||||||||||| || |||||    
T  24097957 tgtatgctaagttgtcaaagtgtgagttctggttaagtgaagtgagttttctgggtca 24098014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 260
Target Start/End: Complemental strand, 37679250 - 37679097
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || |||||| |||| || ||| ||| ||||||    ||||| |||||||| || |||||||||||  | |||||    
T  37679250 ctaatgcgcctggtgtttttatggagtacatgaatcgaatcttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 37679151  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 260  Q
     |||  ||||||  ||||||| |||||| |||| ||||| |||||||| |||||    
T  37679150 caagaatgaggagaagcatgcagagcatctgagaattgtattgcaagtgttgaa 37679097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 172 - 320
Target Start/End: Original strand, 19661390 - 19661538
Alignment:
Q  172 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 271  Q
    ||||| ||||| || ||||| || ||| | ||||||| | |||| |||||||||||  ||||| ||| |||||| ||| |||| || ||||| ||  |||    
T  19661390 gtggttgtgtttattgatgacatcttgatttattcaaggactgaagaagagcatgcatagcatctgaagattgtattgtaagtgttaaaagaaaagaagt 19661489  T
Q  272 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagttt 320  Q
    ||| ||| |||||||| ||||||||||| ||||| |  |||||||||||    
T  19661490 tgtatgctaagttgtcgaagtgtgagttctggttaagtgaagtgagttt 19661538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 202 - 326
Target Start/End: Original strand, 20938347 - 20938471
Alignment:
Q  202 tattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtttt 301  Q
    ||||| ||| |||| ||||||||||  |||||| |||| || || || ||||| |||||||||||  |||||| ||| |||||||| ||||||||||| |    
T  20938347 tattcgaagactgaagaagagcatgtagagcatctgagaatagtattacaagtattgaaagagaaaaagttgtatgctaagttgtcgaagtgtgagttct 20938446  T
Q  302 ggttgaaggaagtgagtttccttgg 326  Q
    |||| |  ||||| ||||| |||||    
T  20938447 ggttaattgaagtaagttttcttgg 20938471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 187 - 339
Target Start/End: Original strand, 22360513 - 22360665
Alignment:
Q  187 gatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 286  Q
    |||||||||||| | || || |||||||| ||||| | ||||||||||||||   | || ||||| || |||||||||||   | | | ||| || ||||    
T  22360513 gatgatattttgatttactccaagtctgaagaagaacctgctgagcatttgaaactggttttgcaggtgttgaaagagaagatgatttatgcgaaattgt 22360612  T
Q  287 ctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |||||||||| || ||||||||||||||||| |  ||||| ||||| ||||||    
T  22360613 ctaagtgtgaattctggttgaaggaagtgagctatcttggacatgttatttct 22360665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 337
Target Start/End: Original strand, 22503552 - 22503708
Alignment:
Q  181 ttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgcca 280  Q
    ||||| |||||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| || ||||||||  |  | | ||| |    
T  22503552 ttcatcgatgatattttgatttactccaagactgaagaagaacatgttgagcatctgaagattgtcttgcaagtgttaaaagagaagaaactttatgcta 22503651  T
Q  281 agttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgattt 337  Q
    |  | |||||||||||||| |||||||| || || ||||| ||||| ||||| ||||    
T  22503652 aaatatctaagtgtgagttctggttgaaagaggtaagttttcttggccatgtcattt 22503708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 326
Target Start/End: Complemental strand, 19856410 - 19856256
Alignment:
Q  172 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 271  Q
    ||||| ||||| || | ||| |||||| | ||||| ||| |||| ||||||||||  || ||| ||| ||| || |||||| | || ||||| ||  |||    
T  19856410 gtggttgtgtttattggtgacattttgatttattctaagactgaagaagagcatgaagaacatctgaagatagtattgcaaatattaaaagaaaagaagt 19856311  T
Q  272 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttgg 326  Q
    ||| ||| |||||||| ||||||||||| | ||| |  |||||||||||||||||    
T  19856310 tgtatgctaagttgtcaaagtgtgagttctagttaagtgaagtgagtttccttgg 19856256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 326
Target Start/End: Original strand, 23196543 - 23196657
Alignment:
Q  212 ctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagga 311  Q
    |||| ||||||||||  |||||| |||  |||||||||||||| |||||||| ||   ||||| |||||||||||| || || ||||| ||||| |  ||    
T  23196543 ctgaagaagagcatgtagagcatctgaaaattgtgttgcaagtgttgaaagaaaagaggttgtatgccaagttgtccaaatgcgagttctggttaagtga 23196642  T
Q  312 agtgagtttccttgg 326  Q
    ||| ||||| |||||    
T  23196643 agtaagttttcttgg 23196657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 339
Target Start/End: Original strand, 38911077 - 38911247
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    ||||| ||||| || || |||||||||||  | ||||| |||  |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||      
T  38911077 tttgttgtggtatttattgatgatattttaatctattccaagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaaggaaaaga 38911176  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
     ||||| ||| ||| |||| || |||||||| ||||| |  |||||||| || || |||||| | ||||||    
T  38911177 ggttgtatgctaagctgtcgaaatgtgagttctggttaagtgaagtgagctttctgggtcatattatttct 38911247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 322 - 351
Target Start/End: Original strand, 22133961 - 22133990
Alignment:
Q  322 cttggtcatgtgatttctaagggtggtatt 351  Q
    ||||||||||||||||||||||||||||||    
T  22133961 cttggtcatgtgatttctaagggtggtatt 22133990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 317; Significance: 1e-179; HSPs: 3)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 11 - 351
Target Start/End: Complemental strand, 42540 - 42200
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42540 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaa 42441  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42440 tgcgctaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 42341  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42340 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 42241  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  42240 aagtgagtttccttggtcatgtgatttctaagggtggtatt 42200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 107 - 339
Target Start/End: Original strand, 31797 - 32029
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| || ||||| || ||||| ||||| |||||| |||| |||||    |||||||| || ||||| ||||| |||||| | |||||    
T  31797 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattc 31896  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     |   |||||||||||||||| || ||| |||||||||| |||||||| |||||||||||  |||||| |||||| ||||| ||||| |||||||||||     
T  31897 gagaactgaggaagagcatgcagaacatctgaggattgtattgcaagtattgaaagagaagaagttgtatgccaaattgtcaaagtgcgagttttggtta 31996  T
Q  307 aaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  ||||||||||| ||||| ||| | ||||||    
T  31997 agtgaagtgagttttcttggccatattatttct 32029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 326
Target Start/End: Original strand, 55085 - 55239
Alignment:
Q  172 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 271  Q
    |||||||| || || ||||||||| |  | ||||| ||| |||| || |||||||| || ||| ||| |||||| |||||||| |||||||| ||  |||    
T  55085 gtggtggtatttattgatgatattctaatctattctaagactgaagaggagcatgcagaacatctgaagattgtattgcaagttttgaaagaaaagaagt 55184  T
Q  272 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttgg 326  Q
    ||| ||| |||||||| || |  ||||||||||| |  ||||| ||||| |||||    
T  55185 tgtatgctaagttgtcgaaataagagttttggttaagtgaagtaagttttcttgg 55239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 313; Significance: 1e-176; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 11 - 351
Target Start/End: Original strand, 21935391 - 21935731
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || ||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  21935391 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaa 21935490  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21935491 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 21935590  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21935591 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 21935690  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  21935691 aagtgagtttccttggtcatgtgatttctaagggtggtatt 21935731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 11 - 351
Target Start/End: Complemental strand, 24583375 - 24583035
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24583375 atcatcagattagagtaaaggcaaaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 24583276  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24583275 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 24583176  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  24583175 tttgaggaagagcatgctgagcatttgagaattgtgttgcaagtcttgaaagagaaccagttgtgcgccaagttgtctaagtgtgagttttggttgaagg 24583076  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  24583075 aagtgagtttccttggtcatgtgatttctaagggtggtatt 24583035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 11 - 351
Target Start/End: Complemental strand, 23507849 - 23507509
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23507849 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 23507750  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  23507749 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaag 23507650  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||| |||||||||||||||||||||||||||||||    
T  23507649 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtattgaaagagaaccagtgatgtgcaaagttgtctaagtgtgagttttggttgaagg 23507550  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  23507549 aagtgagtttccttggtcatgtgatttctaagggtggtatt 23507509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 256 - 351
Target Start/End: Complemental strand, 23505164 - 23505069
Alignment:
Q  256 ttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    ||||| ||||| | ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23505164 ttgaaggagaatcggttatgtgctaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatt 23505069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 67 - 339
Target Start/End: Original strand, 20466358 - 20466630
Alignment:
Q  67 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggacc 166  Q
    |||||||| || || ||||| |||||||| ||||| ||  ||||||| || ||||| |||||| | || |||||| | || |||||| | ||| | || |    
T  20466358 tatggacattacgaatattcagtgatgccttttggtgttactaatgcaccgggtgtgtttatgaagtacatgaatcgtatttttcatgcgtatttagatc 20466457  T
Q  167 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
    | || ||||| ||| |||| |||||||||||| | || || |||||||| ||||| |||| ||||||||||| |||||| ||||||||  |||| |||||    
T  20466458 gcttcgtggttgtgatcatcgatgatattttgatatactctaagtctgaagaagaacatgttgagcatttgaagattgttttgcaagtgctgaaggagaa 20466557  T
Q  267 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
      |||| | |||||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||| ||||||    
T  20466558 gaagttatatgccaagttgtcaaagtgtgagttctggttgaatgaggtgagttttcttggccatgttatttct 20466630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 82 - 339
Target Start/End: Complemental strand, 21409246 - 21408992
Alignment:
Q  82 tattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgt 181  Q
    |||||||||||||| || || ||   |||||||||||| || ||||||||||| |||||| | || |||||| ||||||| || |||||||| || ||||    
T  21409246 tattctgtgatgcctttcggtgttattaatgcgccaggagtatttatggaatatatgaattgtatttttcatacttatctagatcgttttgttgttgtgt 21409147  T
Q  182 tcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaa 281  Q
    | |||||||||||| ||   || || ||||||||||| || ||||| ||||||||||| ||||| ||||||||  |||   ||||  | || | ||||||    
T  21409146 ttatagatgatattctgaaatactctaagtctgaggaggaacatgccgagcatttgagaattgttttgcaagtgctga---agaagaatttatatgccaa 21409050  T
Q  282 gttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    ||| || ||||| || || |||||||| ||||||||||| ||||||||| | ||||||    
T  21409049 gttatcgaagtgcgaattctggttgaacgaagtgagttttcttggtcatattatttct 21408992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 109 - 339
Target Start/End: Complemental strand, 23473312 - 23473082
Alignment:
Q  109 aatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 208  Q
    |||||||||||||| | |||||| || |||||| | || |||||| | | | |||| ||||| ||||| |||||||| || ||||||||| |||| ||||    
T  23473312 aatgcgccaggtgtgtctatggagtacatgaatcgtatttttcatgcatttttggatcgtttcgtggttgtgttcatcgacgatattttgatgtactcaa 23473213  T
Q  209 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaa 308  Q
    ||||||| ||||| |||||||||| ||| |   |||| ||||||||  ||||||||||  |||| | ||| || ||||| ||||||||||| | ||||||    
T  23473212 agtctgaagaagaacatgctgagcgtttaaaagttgttttgcaagtgctgaaagagaagaagttatatgctaaattgtcaaagtgtgagttctagttgaa 23473113  T
Q  309 ggaagtgagtttccttggtcatgtgatttct 339  Q
     || |||||||| ||||| ||||| ||||||    
T  23473112 tgaggtgagttttcttggccatgttatttct 23473082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 107 - 339
Target Start/End: Original strand, 17267633 - 17267865
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||| ||||| ||||| || ||||| || |||||| |||| |||||| | | ||||||    ||||||||||| || || ||||||||| || | |||||    
T  17267633 ctaacgcgcccggtgtgttcatggagtatatgaatcgaatttttcatgcctttctggataaatttgtggtggtatttattgatgatattctgatttattc 17267732  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
    |||| |||| ||||||||||| || ||  |||| |||||||||||||| |||||||| ||  |||||| |||||| ||||| || ||| |||||||| |     
T  17267733 aaagactgaagaagagcatgcagaacacctgagaattgtgttgcaagtgttgaaagaaaagaagttgtatgccaaattgtcgaaatgtaagttttggcta 17267832  T
Q  307 aaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  ||||||||||||||||||||| | ||||||    
T  17267833 agtgaagtgagtttccttggtcatattatttct 17267865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 181 - 337
Target Start/End: Complemental strand, 22349932 - 22349776
Alignment:
Q  181 ttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgcca 280  Q
    ||||| |||||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | |||||    
T  22349932 ttcatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgcca 22349833  T
Q  281 agttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgattt 337  Q
    | ||||||||||||||||| |||||||| ||||||||||| ||||| ||||| ||||    
T  22349832 aattgtctaagtgtgagttctggttgaaagaagtgagttttcttggccatgttattt 22349776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 107 - 339
Target Start/End: Original strand, 21679077 - 21679309
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| || ||||| || ||||| ||||| ||||||  ||| || ||    |||||||| || ||||| ||||| |||||| | |||||    
T  21679077 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgtttacctagataaatttgtggttgtattcattgatgacattttgatctattc 21679176  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     |   |||||||||||||||| || |||  ||||||||| |||||||| |||||||||||  |||||| |||||| ||||| ||||| |||||||||||     
T  21679177 gagaactgaggaagagcatgcagaacatccgaggattgtattgcaagtattgaaagagaagaagttgtatgccaaattgtcaaagtgcgagttttggtta 21679276  T
Q  307 aaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  ||||||||||| ||||| ||| | ||||||    
T  21679277 agtgaagtgagttttcttggccatattatttct 21679309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 169 - 338
Target Start/End: Complemental strand, 40710805 - 40710636
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| || ||||| |||||||||||      
T  40710805 tttgtggttgtgtttatcgacgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaaga 40710706  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 338  Q
    || | | ||| || |||||||||||||| || |||||||| || |||||||||||||| ||||| |||||    
T  40710705 agctttatgctaaattgtctaagtgtgaattctggttgaaagaggtgagtttccttggccatgttatttc 40710636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 169 - 320
Target Start/End: Original strand, 22331248 - 22331399
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||      
T  22331248 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 22331347  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagttt 320  Q
    || | | ||| || |||||||||||||| || |||||||| |||||||||||    
T  22331348 agctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 22331399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 169 - 339
Target Start/End: Original strand, 14998100 - 14998270
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| || || |||||||||||| ||| |||||| |||||||| |||||||||||      
T  14998100 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaggaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 14998199  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    || | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  14998200 agctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 14998270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 169 - 339
Target Start/End: Original strand, 37289857 - 37290027
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||      
T  37289857 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 37289956  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  37289957 aactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 37290027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 169 - 337
Target Start/End: Complemental strand, 19771985 - 19771817
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| |||||||| || ||||| ||| | || || ||| |||| ||||| ||||| |||||| ||| |||||| |||||||| |||||||||||      
T  19771985 tttgtggttgtgttcatcgacgatatcttgatttactccaagactgaagaagaacatgccgagcatctgaagattgttttgcaagtgttgaaagagaaga 19771886  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgattt 337  Q
    || | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||    
T  19771885 agctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttattt 19771817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 180
Target Start/End: Original strand, 20250525 - 20250656
Alignment:
Q  49 actgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaatgaatagaatat 148  Q
    |||||||| ||||| ||||||||||| |||||||||| | | ||||||||||| ||| |||| | | |||||  |||||||||||| |||||||| || |    
T  20250525 actgcgtttcgaacaaggtatggacattatgagtattttattatgccatttggtgtaactaacgtgtcaggtaactttatggaatatatgaataggattt 20250624  T
Q  149 ttcatccttatctggaccgttttgtggtggtg 180  Q
    | ||||||||| |||| |  ||||||||||||    
T  20250625 tccatccttatttggatcaatttgtggtggtg 20250656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 339
Target Start/End: Complemental strand, 25428503 - 25428288
Alignment:
Q  124 tttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagc 223  Q
    |||||||| || |||||| | || |||||| | | | ||||||| || ||||| || || || |||||||||||| | || || |||||||| ||||| |    
T  25428503 tttatggagtacatgaatcgcatctttcatgcatttttggaccgattcgtggttgtttttattgatgatattttgatttactccaagtctgaagaagaac 25428404  T
Q  224 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttcct 323  Q
    |||||||||||||||   | || |||||||| |||||||||||  || | | ||| || |||||||||||||| || | |||||| |||||||| || ||    
T  25428403 atgctgagcatttgaatctggttttgcaagtgttgaaagagaagaagctttatgcgaaattgtctaagtgtgaattctagttgaaagaagtgagctttct 25428304  T
Q  324 tggtcatgtgatttct 339  Q
    ||| ||||| ||||||    
T  25428303 tggacatgttatttct 25428288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 339
Target Start/End: Complemental strand, 27612376 - 27612209
Alignment:
Q  172 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 271  Q
    ||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |      
T  27612376 gtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaac 27612277  T
Q  272 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  27612276 tttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 27612209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 169 - 339
Target Start/End: Complemental strand, 22136693 - 22136523
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || || || |||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||      
T  22136693 tttgtggttgtgtttatcgacgacattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 22136594  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  22136593 aactttttgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 22136523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 172 - 338
Target Start/End: Original strand, 27666854 - 27667020
Alignment:
Q  172 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 271  Q
    ||||| |||||||| || ||||| ||| | || || ||| |||| ||||| ||||| |||||| ||| |||||| || ||||| |||||||||||  |      
T  27666854 gtggttgtgttcatcgacgatatcttgatttactccaagactgaagaagaacatgccgagcatctgaagattgtcttacaagtgttgaaagagaagaaac 27666953  T
Q  272 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 338  Q
    | | ||| || |||||||||||||| || |||||||| ||||||||||||||||| ||||| |||||    
T  27666954 tttatgctaaattgtctaagtgtgaattctggttgaatgaagtgagtttccttggccatgttatttc 27667020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 339
Target Start/End: Complemental strand, 16358506 - 16358357
Alignment:
Q  190 gatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtcta 289  Q
    ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| || ||||| |||||||||||  || | | ||| || |||||||    
T  16358506 gatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaagctttatgctaaattgtcta 16358407  T
Q  290 agtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    ||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  16358406 agtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 16358357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 339
Target Start/End: Complemental strand, 34568498 - 34568349
Alignment:
Q  190 gatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtcta 289  Q
    ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| || ||||| |||||||||||  || | | ||| || |||||||    
T  34568498 gatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaagctttatgctaaattgtcta 34568399  T
Q  290 agtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    ||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  34568398 agtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 34568349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 212 - 339
Target Start/End: Complemental strand, 18781096 - 18780969
Alignment:
Q  212 ctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagga 311  Q
    |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||| || |||||||||||||| || || ||||||||    
T  18781096 ctgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttttgcgaaattgtctaagtgtgaattctgattgaagga 18780997  T
Q  312 agtgagtttccttggtcatgtgatttct 339  Q
    ||| ||||| ||||| ||||| ||||||    
T  18780996 agtaagttttcttggccatgttatttct 18780969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 323
Target Start/End: Complemental strand, 20823460 - 20823306
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||||||||| ||||||||||| ||| | ||||||||  |||| || || || || || ||  ||| ||||||||||||  | ||||||||||       
T  20823460 tttgtggtggtgtttatagatgatatattgatctattcaaaaactgaagaggaacacgccgaacacctgaagattgtgttgcagattttgaaagagagaa 20823361  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttcct 323  Q
    |||||| |||||||||||| ||||| ||||| ||||| |  ||||||||||||||    
T  20823360 agttgtatgccaagttgtcgaagtgcgagttctggttaagtgaagtgagtttcct 20823306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 339
Target Start/End: Complemental strand, 22463958 - 22463788
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    ||||||||||| || ||||||||||||||| | ||||| ||  |||| || |||||||| || || |||| ||||||||||||  | ||||| ||||       
T  22463958 tttgtggtggtatttatagatgatattttgatttattctaaaactgaagaggagcatgcagaacacttgaagattgtgttgcagattttgaaggagagaa 22463859  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |||||| |||||||||||| ||||  ||||| ||||| |  ||||||||||| || || ||||| ||||||    
T  22463858 agttgtatgccaagttgtcgaagtacgagttctggttaagtgaagtgagttttctaggccatgttatttct 22463788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 339
Target Start/End: Original strand, 26737028 - 26737258
Alignment:
Q  109 aatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 208  Q
    ||||| || ||||| |||||||| || ||||||  ||| |||||| | | | | || ||||| ||||| |||||||| |||||||||||| | || || |    
T  26737028 aatgcacctggtgtgtttatggagtacatgaatcaaatttttcatgcatttttagatcgtttcgtggttgtgttcatcgatgatattttgatttactcca 26737127  T
Q  209 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaa 308  Q
    |||| || ||||| |||||||| ||||||| |||| | ||||||||  ||||||| ||  |||| | ||| || || || |||||||| || ||||||||    
T  26737128 agtccgaagaagaacatgctgaacatttgaagattattttgcaagtgctgaaagataagaagttatatgctaaattatcaaagtgtgaattctggttgaa 26737227  T
Q  309 ggaagtgagtttccttggtcatgtgatttct 339  Q
     || || ||||| ||||| ||||| ||||||    
T  26737228 agaggtaagttttcttggccatgttatttct 26737258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 339
Target Start/End: Complemental strand, 27520431 - 27520261
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || || ||||||||  | || || ||| |||| ||||| |||||||||||| ||| |||||| || ||||| |||||||||||      
T  27520431 tttgtggttgtgtttatcgacgatattttaatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaaga 27520332  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  27520331 aactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 27520261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 339
Target Start/End: Original strand, 29474434 - 29474604
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || |||||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||      
T  29474434 tttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 29474533  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  | | ||  || || || |||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  29474534 aactttatgataaattatcgaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 29474604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 339
Target Start/End: Complemental strand, 41772867 - 41772697
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || || ||||| ||| | || || ||| |||| ||||| ||||| |||||| ||| |||||| |||||||| |||||||||||      
T  41772867 tttgtggttgtgtttatcgacgatatcttgatttactccaagactgaagaagaacatgccgagcatctgaagattgttttgcaagtgttgaaagagaaga 41772768  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    | || | ||| || |||||||| ||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  41772767 atttttatgctaaattgtctaaatgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 41772697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 109 - 266
Target Start/End: Original strand, 21337595 - 21337752
Alignment:
Q  109 aatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 208  Q
    |||||||||||||| ||||||||||| |||||| | || |||||| | | | ||||  | || ||||| || ||||| || ||||||||| | || || |    
T  21337595 aatgcgccaggtgtgtttatggaatacatgaatcgtatttttcatgcgtttttggatagcttagtggttgtattcatcgacgatattttgatttactcca 21337694  T
Q  209 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
    ||| ||| ||||| ||||||||||| |||| |||||| ||||||||  ||||||||||    
T  21337695 agtttgaagaagaacatgctgagcacttgaagattgttttgcaagtgctgaaagagaa 21337752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 187 - 339
Target Start/End: Complemental strand, 20801404 - 20801252
Alignment:
Q  187 gatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 286  Q
    |||||||||||  | || || ||| |||| ||||| |||||||||||| ||| |||||| ||||||||  ||||||||||  |  | | ||| || || |    
T  20801404 gatgatattttaatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgctgaaagagaagaaactttatgctaaattat 20801305  T
Q  287 ctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    ||||||||||||| |||||||| || || ||||||||||| ||||| ||||||    
T  20801304 ctaagtgtgagttctggttgaaagaggtaagtttccttggccatgtcatttct 20801252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 320
Target Start/End: Original strand, 27683761 - 27683912
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || ||  |||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||| ||||||      
T  27683761 tttgtggttgtgtttatcgacaatattttgatttactccaagactgacgaagaacatgctgagcatctgaagattgttttgcaagtgttgagagagaaga 27683860  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagttt 320  Q
    || | | ||| || |||||||||||||| || ||||| || |||||||||||    
T  27683861 agctttatgctaaattgtctaagtgtgaattctggttcaaagaagtgagttt 27683912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 107 - 329
Target Start/End: Original strand, 14885290 - 14885512
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || |||||  |||| || ||| ||| ||||||    ||||||||||| || || |||||||| ||  | |||||    
T  14885290 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgtggtggtatttattgatgatatcttaatttattc 14885389  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     |||  |||||| || || || |||||| |||| || ||||||||||| ||||| || ||   ||||| ||| |||||||| || |||||||| |||||     
T  14885390 caagaatgaggaggaacacgcagagcatctgagaatagtgttgcaagtgttgaaggaaaagaggttgtatgctaagttgtcaaaatgtgagttctggtta 14885489  T
Q  307 aaggaagtgagtttccttggtca 329  Q
    || ||||| |||||||| |||||    
T  14885490 aatgaagtaagtttcctgggtca 14885512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 340
Target Start/End: Original strand, 22234219 - 22234452
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| ||| |||| || ||||| | ||| || ||| ||||||||||    |||||||| ||||| || ||||| || ||  | |||||    
T  22234219 ctaatgcgcctggtgtgtttgtggagtatatgaacaaaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttaatttattc 22234318  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     ||| |||| ||||||||||| || ||| ||| |||||| |||||||| |||||||| ||  |||||| || |||||| || || ||||| || |||||     
T  22234319 taagactgaagaagagcatgcagatcatctgaagattgtattgcaagtgttgaaagaaaagaagttgtatgtcaagttatcaaaatgtgaattctggtta 22234418  T
Q  307 aaggaagtgagtttccttggtcatgtgatttcta 340  Q
    |  ||||| ||||| ||||| ||| | |||||||    
T  22234419 agtgaagtaagttttcttggccatattatttcta 22234452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 329
Target Start/End: Complemental strand, 22504635 - 22504526
Alignment:
Q  220 gagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtt 319  Q
    |||||||| |||||| |||| ||||| |||||||| |||||||||||   ||||| ||| |||||||| || |||||||| ||||| |  ||||||||||    
T  22504635 gagcatgcagagcatctgagaattgtattgcaagttttgaaagagaagaggttgtatgcaaagttgtcaaaatgtgagttctggttaagtgaagtgagtt 22504536  T
Q  320 tccttggtca 329  Q
    | || |||||    
T  22504535 ttctgggtca 22504526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 305
Target Start/End: Complemental strand, 20344289 - 20344153
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    ||||| |||||||| || |||||||| ||  | ||||| |||  ||| || |||||||| |||||| |||| ||||| |||||||| |||||||||||      
T  20344289 tttgttgtggtgtttattgatgatatcttaatttattccaagaatgaagaggagcatgcagagcatctgagaattgtcttgcaagttttgaaagagaaga 20344190  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggtt 305  Q
     ||||| ||| |||||||| || |||||||| |||||    
T  20344189 ggttgtatgctaagttgtcaaaatgtgagttctggtt 20344153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 339
Target Start/End: Original strand, 28893303 - 28893473
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    ||||||||||| || ||||||||||| ||| | ||||| ||  |||| || || || || || ||  ||| ||||||||||||  | ||||||||||       
T  28893303 tttgtggtggtatttatagatgatatattgatctattctaaaactgaagaggaacacgccgaacacctgaagattgtgttgcagattttgaaagagagaa 28893402  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |||||| |||||||||||| ||||| ||||| ||||| |  ||||||||||| || || ||||| ||||||    
T  28893403 agttgtatgccaagttgtcgaagtgcgagttctggttaagtgaagtgagttttctaggccatgtcatttct 28893473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 339
Target Start/End: Original strand, 28914774 - 28914944
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    ||||||||||| || ||||||||||| ||| | ||||| ||  |||| || || || || || ||  ||| ||||||||||||  | ||||||||||       
T  28914774 tttgtggtggtatttatagatgatatattgatctattctaaaactgaagaggaacacgccgaacacctgaagattgtgttgcagattttgaaagagagaa 28914873  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |||||| |||||||||||| ||||| ||||| ||||| |  ||||||||||| || || ||||| ||||||    
T  28914874 agttgtatgccaagttgtcgaagtgcgagttctggttaagtgaagtgagttttctaggccatgtcatttct 28914944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 339
Target Start/End: Original strand, 28922129 - 28922299
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    ||||||||||| || ||||||||||| ||| | ||||| ||  |||| || || || || || ||  ||| ||||||||||||  | ||||||||||       
T  28922129 tttgtggtggtatttatagatgatatattgatctattctaaaactgaagaggaacacgccgaacacctgaagattgtgttgcagattttgaaagagagaa 28922228  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |||||| |||||||||||| ||||| ||||| ||||| |  ||||||||||| || || ||||| ||||||    
T  28922229 agttgtatgccaagttgtcgaagtgcgagttctggttaagtgaagtgagttttctaggccatgtcatttct 28922299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 339
Target Start/End: Original strand, 28930042 - 28930212
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    ||||||||||| || ||||||||||| ||| | ||||| ||  |||| || || || || || ||  ||| ||||||||||||  | ||||||||||       
T  28930042 tttgtggtggtatttatagatgatatattgatctattctaaaactgaagaggaacacgccgaacacctgaagattgtgttgcagattttgaaagagagaa 28930141  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |||||| |||||||||||| ||||| ||||| ||||| |  ||||||||||| || || ||||| ||||||    
T  28930142 agttgtatgccaagttgtcgaagtgcgagttctggttaagtgaagtgagttttctaggccatgtcatttct 28930212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 107 - 260
Target Start/End: Original strand, 24796696 - 24796849
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || |||||  |||| || ||| ||| ||||||    ||||| |||||||| || ||||||||| |  | |||||    
T  24796696 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattctaatttattc 24796795  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 260  Q
     |||  |||||| |||||||| |||||| |||| || ||||||||||| |||||    
T  24796796 caagaatgaggaggagcatgcagagcatctgagaatagtgttgcaagtgttgaa 24796849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 332
Target Start/End: Complemental strand, 20777849 - 20777757
Alignment:
Q  240 gattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgt 332  Q
    ||||||||||||  | ||||||||||   |||||| |||||||||||| ||||| ||||| ||||| |  |||||||||||||| || |||||    
T  20777849 gattgtgttgcagattttgaaagagagaaagttgtatgccaagttgtcgaagtgcgagttctggttaagtgaagtgagtttcctaggccatgt 20777757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 305
Target Start/End: Original strand, 24618704 - 24618792
Alignment:
Q  217 gaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggtt 305  Q
    ||||||||||| |||||| |||  |||||||||||||| |||||||| ||   ||||| |||||||||||| || || ||||| |||||    
T  24618704 gaagagcatgcagagcatctgaaaattgtgttgcaagtgttgaaagaaaagaggttgtatgccaagttgtccaaatgcgagttctggtt 24618792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 305
Target Start/End: Original strand, 24714935 - 24715023
Alignment:
Q  217 gaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggtt 305  Q
    ||||||||||| |||||| |||  |||||||||||||| |||||||| ||   ||||| |||||||||||| || || ||||| |||||    
T  24714935 gaagagcatgcagagcatctgaaaattgtgttgcaagtgttgaaagaaaagaggttgtatgccaagttgtccaaatgcgagttctggtt 24715023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 305
Target Start/End: Original strand, 24747963 - 24748051
Alignment:
Q  217 gaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggtt 305  Q
    ||||||||||| |||||| |||  |||||||||||||| |||||||| ||   ||||| |||||||||||| || || ||||| |||||    
T  24747963 gaagagcatgcagagcatctgaaaattgtgttgcaagtgttgaaagaaaagaggttgtatgccaagttgtccaaatgcgagttctggtt 24748051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 329
Target Start/End: Complemental strand, 25850082 - 25849922
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    ||||| || |||||||| |||||||| ||| | ||||| |||  ||| || |||||||| |||||| |||| || || |||||||| ||||| || ||      
T  25850082 tttgttgtagtgttcattgatgatatcttgatttattcgaagaatgaagaggagcatgcagagcatctgagaatagtattgcaagtgttgaaggaaaaga 25849983  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtca 329  Q
     ||||| ||| |||||||| || |||||||| ||||| |  ||||||||||| || |||||    
T  25849982 ggttgtatgcaaagttgtcgaaatgtgagttctggttaagtgaagtgagttttctgggtca 25849922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 329
Target Start/End: Original strand, 37541680 - 37541902
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| ||||||||||| |||||| |||| || ||| | | ||||||    ||||| ||||| || || ||||||||| |  | |||||    
T  37541680 ctaatgcgcctggtgtttttatggaatacatgaatcgaattttccatgcctttctggataagtttgttgtggtatttattgatgatattctaatctattc 37541779  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     |||  |||||| || || || |||||| |||| || ||||||||||| ||||| || ||   ||||| ||| ||||| || || |||||||| |||||     
T  37541780 caagaatgaggaggaacacgcagagcatctgagaatagtgttgcaagtgttgaaggaaaagaggttgtatgctaagttatcaaaatgtgagttctggtta 37541879  T
Q  307 aaggaagtgagtttccttggtca 329  Q
    || ||||| ||||| || |||||    
T  37541880 aatgaagtaagttttctgggtca 37541902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 260
Target Start/End: Original strand, 21562323 - 21562476
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||| | ||||| |||||||| || ||||||||||| || ||| | ||| | ||  | ||||| || ||||| |||||||| ||  || | |||||    
T  21562323 ctaatgcgtctggtgtgtttatggagtacatgaatagaattttccatgcctatttagattggtttgtagttgtgtttatagatgacatcctgatttattc 21562422  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 260  Q
     ||| |||| ||||||||||| |||||||| |  |||||||| ||||| |||||    
T  21562423 taagactgaagaagagcatgcagagcatttaaaaattgtgtttcaagtgttgaa 21562476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 309; Significance: 1e-174; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 11 - 351
Target Start/End: Original strand, 15291179 - 15291519
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15291179 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 15291278  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15291279 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccttatctggaccattttgtggtggtgttcatagatgatattttggtgtattcaaag 15291378  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15291379 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgcgccaagttgtctaagtgtgagttttggttgaagg 15291478  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  15291479 aagtgagtttccttggtcatgtgatttctaagggtggtatt 15291519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 36 - 351
Target Start/End: Original strand, 12340911 - 12341226
Alignment:
Q  36 ggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataa 135  Q
    ||||||||||||||| |||||||||||  || |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||     
T  12340911 ggatatatccaaaaccgcgttccgaacagggaatggacactatgagtattctgtgatgccatttggagtgactaatgcgccaggtgtcttcatggaatat 12341010  T
Q  136 atgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatt 235  Q
    |||||||| ||||| ||||||| ||||||| ||||||||||  | || || |||||||| || |||||| | ||||| ||||| |||||||||||||||     
T  12341011 atgaataggatattccatccttttctggactgttttgtggtaatatttatcgatgatatcttcgtgtatacgaagtcagaggaggagcatgctgagcatc 12341110  T
Q  236 tgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgat 335  Q
    |||||||||||||||  |||||||| || ||  |||||| | | ||| | || || ||||||||||||||   |||||| ||||||||||||||| ||||    
T  12341111 tgaggattgtgttgcgtgtcttgaaggaaaagaagttgttttctaagctttcaaattgtgagttttggttacgggaagtaagtttccttggtcatatgat 12341210  T
Q  336 ttctaagggtggtatt 351  Q
    ||  ||||||||||||    
T  12341211 tttgaagggtggtatt 12341226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 256 - 351
Target Start/End: Complemental strand, 14999321 - 14999226
Alignment:
Q  256 ttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    ||||| ||||| ||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14999321 ttgaaggagaatcagttctgtgctaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatt 14999226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 67 - 340
Target Start/End: Complemental strand, 14696308 - 14696035
Alignment:
Q  67 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggacc 166  Q
    |||||||| ||| | ||||| |||||||| ||||| ||  | |||||||||||||| |||||||| || |||||    || |||||| | ||| ||||      
T  14696308 tatggacattattaatattcagtgatgccttttggtgttacaaatgcgccaggtgtgtttatggagtacatgaactctatttttcatgcgtatttggatt 14696209  T
Q  167 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
    | || ||||| |||||||| |||||||||||| | || || ||||| || ||||| |||||||||||||||| |||||| ||||||||  ||||||||||    
T  14696208 gcttcgtggttgtgttcattgatgatattttgatatactcgaagtccgaagaagaacatgctgagcatttgaagattgttttgcaagtgctgaaagagaa 14696109  T
Q  267 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttcta 340  Q
      | || | ||| |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||| |||||||    
T  14696108 gaatttatatgctaagttgtcaaagtgtgagttctggttgaatgaggtgagttttcttggccatgttatttcta 14696035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 256 - 351
Target Start/End: Complemental strand, 9292841 - 9292746
Alignment:
Q  256 ttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    ||||| ||||| ||||| ||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  9292841 ttgaaggagaatcagttatgtgcgaagttgtctaagtgtgagttttggttgaaggaaatgactttccttggtcatgtgatttctaagggtggtatt 9292746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 107 - 339
Target Start/End: Complemental strand, 15323372 - 15323140
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| ||||||||||| ||||||||||| || ||| ||||||||||    |||||||| ||||| || ||||||||| |  | |||||    
T  15323372 ctaatgcgcctggtgtgtttatggaatacatgaatagaattttccatgcttatctggataaatttgtggttgtgtttattgatgatattgtaatttattc 15323273  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     |||  ||| ||||||||||| |||||| |||  |||||||||||||| |||||||| ||  |||||| |||||||||||| || ||||| || |||||     
T  15323272 taagagtgaagaagagcatgcagagcatctgaaaattgtgttgcaagtgttgaaagaaaagaagttgtatgccaagttgtccaaatgtgaattctggtta 15323173  T
Q  307 aaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  ||||| ||||| ||||| ||| | ||||||    
T  15323172 agtgaagtaagttttcttggccatattatttct 15323140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 107 - 339
Target Start/End: Original strand, 51604909 - 51605141
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||| ||||| ||||| || ||||| || |||||| |||| |||||| ||| ||||||    || |||||||| || || ||||||||| || | |||||    
T  51604909 ctaacgcgcccggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattctgatttattc 51605008  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     ||| |||| ||||||||||| || ||| |||| |||||| ||||||| |||||||||||  |||||| |||||| ||||| || |||||||||||| |     
T  51605009 gaagactgaagaagagcatgcagaacatctgagaattgtgctgcaagttttgaaagagaagaagttgtatgccaaattgtcgaaatgtgagttttggcta 51605108  T
Q  307 aaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  ||||||||||||||||||||| | ||||||    
T  51605109 agtgaagtgagtttccttggtcatattatttct 51605141  T

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Target: chr4; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 64 - 340
Target Start/End: Original strand, 8322850 - 8323126
Alignment:
Q  64 aggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctgg 163  Q
    ||||||||||||||| | ||||| || ||||| |||||  |  |||||||| |||  || ||||||||||| |  ||||  || |||||||| |||  ||    
T  8322850 aggtatggacactataaatattcggtaatgccgtttggtatgactaatgcgtcagacgtatttatggaatacacaaatatgatctttcatccctattcgg 8322949  T
Q  164 accgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaaga 263  Q
    | |  |||||||||||||||||||| ||||||||||||||||| ||||  ||||| |||||||| |||||| |||| ||||| ||| |  ||||||| ||    
T  8322950 atcagtttgtggtggtgttcatagacgatattttggtgtattcgaagttggaggaggagcatgcagagcatctgagaattgtattggagatcttgaagga 8323049  T
Q  264 gaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttcta 340  Q
    |||  | |||| ||| |||||||| |||||||| || ||||||   |||||| |||| |||  ||||||||| ||||    
T  8323050 gaagaaattgtatgctaagttgtcgaagtgtgatttctggttgcgagaagtgggttttcttaatcatgtgatatcta 8323126  T

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Target: chr4; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 67 - 305
Target Start/End: Complemental strand, 8708106 - 8707868
Alignment:
Q  67 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggacc 166  Q
    |||||||| || || ||||| |||||||| || || ||  |||| ||||  ||||| |||||||| || ||||||||||| || ||| ||||| |||| |    
T  8708106 tatggacattacgaatattcagtgatgcctttcggtgttactaacgcgcggggtgtgtttatggagtacatgaatagaattttccatgcttatttggatc 8708007  T
Q  167 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
    | |||||||| ||||| || ||||| || ||| | ||||| |||||||| ||||||||||| ||||||| ||   ||||||||||||| ||||| || ||    
T  8708006 ggtttgtggttgtgtttattgatgacatcttgatttattctaagtctgaagaagagcatgcagagcattagaaagttgtgttgcaagtgttgaaggaaaa 8707907  T
Q  267 ccagttgtgtgccaagttgtctaagtgtgagttttggtt 305  Q
      || ||| |||||||||||| || ||||| ||||||||    
T  8707906 gaagatgtatgccaagttgtccaaatgtgaattttggtt 8707868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 178 - 339
Target Start/End: Complemental strand, 14682651 - 14682490
Alignment:
Q  178 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 277  Q
    |||||||| |||||||||||| | || || ||| ||||  |||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||    
T  14682651 gtgttcatcgatgatattttgatttactccaagactgaaaaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatg 14682552  T
Q  278 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |||| |||||||||||||| || |||||||| ||||||||||| ||||| ||||| ||||||    
T  14682551 ccaaattgtctaagtgtgaattctggttgaaagaagtgagttttcttggccatgttatttct 14682490  T

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Target: chr4; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 124 - 339
Target Start/End: Complemental strand, 40475178 - 40474963
Alignment:
Q  124 tttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagc 223  Q
    |||||||| || |||||| | || |||||| | | | |||| || |||||||| |||||||| |||||||||||| | || || ||| |||| ||||| |    
T  40475178 tttatggagtatatgaatcgcatctttcatgcatttttggatcggtttgtggttgtgttcatcgatgatattttgatttactccaagactgaagaagaac 40475079  T
Q  224 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttcct 323  Q
    ||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||| || ||||| |||||||| || |||||||| ||||||||||| ||    
T  40475078 atgctgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatgctaaattgtcgaagtgtgaattctggttgaaagaagtgagttttct 40474979  T
Q  324 tggtcatgtgatttct 339  Q
     || ||||| ||||||    
T  40474978 aggccatgttatttct 40474963  T

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Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 169 - 339
Target Start/End: Original strand, 8051542 - 8051712
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||      
T  8051542 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 8051641  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  | | |||||| |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  8051642 aactttatgccaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 8051712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 169 - 339
Target Start/End: Original strand, 14301898 - 14302068
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || |||||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||      
T  14301898 tttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 14301997  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  14301998 aactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 14302068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 169 - 339
Target Start/End: Complemental strand, 23957840 - 23957670
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||      
T  23957840 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 23957741  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    || | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  23957740 agctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 23957670  T

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Target: chr4; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 107 - 298
Target Start/End: Original strand, 15001482 - 15001673
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| | ||| |||||||| || |||||  |||| || ||| ||||||||||    |||||||| ||||| || ||||| || ||| | |||||    
T  15001482 ctaatgcgcctgttgtgtttatggagtatatgaaccgaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttgatttattc 15001581  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagt 298  Q
     |||  ||| ||||||||||| || ||| ||||||||||||||||||| |||||||| ||  |||||| ||||||||||| ||| |||||||    
T  15001582 taagattgaagaagagcatgcagaacatctgaggattgtgttgcaagtgttgaaagaaaagaagttgtatgccaagttgtttaaatgtgagt 15001673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 109 - 339
Target Start/End: Original strand, 14849225 - 14849455
Alignment:
Q  109 aatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 208  Q
    |||||||||||||| |||||||| || |||||| | || |||||| | | | |||| || || ||||| |||||||| || ||||||||| | || || |    
T  14849225 aatgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcatttttggatcgcttcgtggttgtgttcatcgacgatattttgatatactcca 14849324  T
Q  209 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaa 308  Q
    |||| || ||||| |||| ||||||||||| |||||| ||||||||  |||| |||||  |||| | ||| || ||||| |||||||| || ||||||||    
T  14849325 agtccgaagaagaacatgttgagcatttgaagattgttttgcaagtgctgaaggagaagaagttatatgctaaattgtcaaagtgtgaattctggttgaa 14849424  T
Q  309 ggaagtgagtttccttggtcatgtgatttct 339  Q
     || || ||||| ||||| || || ||||||    
T  14849425 agaggtaagttttcttggccaagttatttct 14849455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 107 - 329
Target Start/End: Complemental strand, 15072514 - 15072292
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || ||||||||| | || ||| ||||||||||    |||||||| ||||| || ||||||||  |  | |||||    
T  15072514 ctaatgcgcctggtgtgtttatggagtacatgaatagagttttccatgcttatctggataaatttgtggttgtgtttattgatgatatcctaatttattc 15072415  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     |||  |||  |||||||||| |||||| ||| ||||||||||||||| |||||||| ||   ||||| |||||||||||| || ||||| || |||||     
T  15072414 taagaatgaataagagcatgcagagcatctgaagattgtgttgcaagtgttgaaagaaaagaggttgtatgccaagttgtccaaatgtgaattctggtta 15072315  T
Q  307 aaggaagtgagtttccttggtca 329  Q
    |  ||||| ||||| ||||||||    
T  15072314 agtgaagtaagttttcttggtca 15072292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 169 - 339
Target Start/End: Complemental strand, 27713429 - 27713259
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||      
T  27713429 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 27713330  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    || | | ||| || |||||||||||||| || | |||||| ||||||||||| || || ||||| ||||||    
T  27713329 agctttatgctaaattgtctaagtgtgaattctagttgaaagaagtgagttttctaggccatgttatttct 27713259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 339
Target Start/End: Complemental strand, 12478684 - 12478523
Alignment:
Q  178 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 277  Q
    |||||||| || ||||||||| | || || ||| | || ||||| ||||| |||||| ||| |||||| |||||||| |||||||||||  |  | | ||    
T  12478684 gtgttcatcgacgatattttgatttactccaagaccgaagaagaacatgccgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatg 12478585  T
Q  278 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |||| |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  12478584 ccaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 12478523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 339
Target Start/End: Original strand, 19776721 - 19776882
Alignment:
Q  178 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 277  Q
    |||||||| || ||||||||| | || || ||| | || ||||| ||||| |||||| ||| |||||| |||||||| |||||||||||  |  | | ||    
T  19776721 gtgttcatcgacgatattttgatttactccaagaccgaagaagaacatgccgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatg 19776820  T
Q  278 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |||| |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  19776821 ccaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 19776882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 329
Target Start/End: Original strand, 3262911 - 3263133
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || |||||  |||| || ||| ||| ||||||    ||||| |||||||| || |||||||||||  | |||||    
T  3262911 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 3263010  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     |||  |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||   ||||| ||| ||||| || || |||||||| |||||     
T  3263011 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaaggaaaagaggttgtatgctaagttatcaaaatgtgagttctggtta 3263110  T
Q  307 aaggaagtgagtttccttggtca 329  Q
    || ||||| ||||| || |||||    
T  3263111 aatgaagtaagttttctgggtca 3263133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 338
Target Start/End: Complemental strand, 8388462 - 8388336
Alignment:
Q  212 ctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagga 311  Q
    |||| ||||| |||||||||||| ||| |||||| || ||||| |||||||||||  |  | | ||| || |||||||||||||| || |||||||| ||    
T  8388462 ctgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaatga 8388363  T
Q  312 agtgagtttccttggtcatgtgatttc 338  Q
     |||||||||||||| ||||| |||||    
T  8388362 ggtgagtttccttggccatgttatttc 8388336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 107 - 339
Target Start/End: Original strand, 1647394 - 1647626
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || |||||||| || || ||| ||| ||||||    || |||||||| ||||| |||||||||||| | |||||    
T  1647394 ctaatgcgcctggtgtgtttatggagtatatgaataggattttccatgcttttctggataaattcgtggtggtattcattgatgatattttgatttattc 1647493  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     ||| |||| || |||||||| || ||  ||| |||||||||||   |  ||||||| |   |||||| ||| |||||||| ||||| ||||| |||||     
T  1647494 taagactgaagaggagcatgcagaacacctgaagattgtgttgcggattctgaaagaaagaaagttgtatgctaagttgtcgaagtgcgagttctggtta 1647593  T
Q  307 aaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  |||||||||||  |||| || |||||||||    
T  1647594 agtgaagtgagttttgttggccacgtgatttct 1647626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 107 - 299
Target Start/End: Original strand, 44659983 - 44660175
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||| ||||| ||||| |||||||| || |||||| |||| || ||| ||| ||||||    ||||| |||||||| || || ||||||||  | |||||    
T  44659983 ctaacgcgcctggtgtatttatggagtacatgaatcgaatcttccatgcttttctggataagtttgttgtggtgtttattgacgatattttaatctattc 44660082  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtt 299  Q
     |||  |||||| |||||||| |||||| |||| |||||||||||||| ||||| || ||   ||||| ||| |||||||| || ||||||||    
T  44660083 caagaatgaggaggagcatgcagagcatctgagaattgtgttgcaagtgttgaaggaaaagaggttgtatgcaaagttgtcgaaatgtgagtt 44660175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 237
Target Start/End: Original strand, 18547696 - 18547866
Alignment:
Q  67 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggacc 166  Q
    ||||| || ||||||||||| |||| ||| || ||| | ||||| |||||||| || |||||||| || ||||| ||||| || ||||| ||| | || |    
T  18547696 tatggtcattatgagtattcggtgaagcctttcggaatgtctaacgcgccaggagtgtttatggagtatatgaacagaatcttccatccgtatttagatc 18547795  T
Q  167 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttg 237  Q
      ||||| ||||| ||||| ||||||||||||||||| || || || ||||| || ||||| || ||||||    
T  18547796 agtttgttgtggtattcattgatgatattttggtgtactctaaatcggaggaggaacatgcagaacatttg 18547866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 187 - 339
Target Start/End: Original strand, 15145822 - 15145974
Alignment:
Q  187 gatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 286  Q
    |||||||||||| | || || ||| |||| ||||| |||||||||||| |||  ||||| |||||||| ||||||||||   |  | | ||| || || |    
T  15145822 gatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaacattgtcttgcaagtgttgaaagagaggaaactttatgctaaattat 15145921  T
Q  287 ctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    ||||||||||||| |||||||| || || ||||| ||||| ||||| ||||||    
T  15145922 ctaagtgtgagttctggttgaaagaggtaagttttcttggccatgttatttct 15145974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 305
Target Start/End: Complemental strand, 16149804 - 16149668
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || || |||||| || | ||||||| | |||| ||||||||||| || ||| ||| |||||| |||||| | |||||||| ||      
T  16149804 tttgtggttgtgtttattgacgatattctgatttattcaatgactgaagaagagcatgcagaacatctgaagattgtattgcaaatattgaaagaaaaga 16149705  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggtt 305  Q
    |||||| ||| ||||| || ||||||||||| |||||    
T  16149704 agttgtatgctaagttatcgaagtgtgagttctggtt 16149668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 305
Target Start/End: Complemental strand, 16153950 - 16153814
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || || |||||| || | ||||||| | |||| ||||||||||| || ||| ||| |||||| |||||| | |||||||| ||      
T  16153950 tttgtggttgtgtttattgacgatattctgatttattcaatgactgaagaagagcatgcagaacatctgaagattgtattgcaaatattgaaagaaaaga 16153851  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggtt 305  Q
    |||||| ||| ||||| || ||||||||||| |||||    
T  16153850 agttgtatgctaagttatcgaagtgtgagttctggtt 16153814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 172 - 320
Target Start/End: Complemental strand, 27902476 - 27902328
Alignment:
Q  172 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 271  Q
    |||||||| || || ||| |||||||| | ||||| ||| |||| || |||||||| || ||  ||| ||||||||||||  | ||||||||||   |||    
T  27902476 gtggtggtatttattgatcatattttgatttattctaagactgaagaggagcatgcagaacacatgaagattgtgttgcagattttgaaagagagaaagt 27902377  T
Q  272 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagttt 320  Q
    ||| |||||||||||| ||||| ||||| | ||| || |||||||||||    
T  27902376 tgtatgccaagttgtcgaagtgcgagttctagttaaatgaagtgagttt 27902328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 305
Target Start/End: Original strand, 15357332 - 15357435
Alignment:
Q  202 tattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtttt 301  Q
    ||||| ||| |||| ||||||||||| || ||| ||| |||||| || ||||| |||||||| ||  |||||| |||||||||||| || |||||||| |    
T  15357332 tattctaagactgaagaagagcatgcagaacatctgaagattgtattacaagtattgaaagaaaagaagttgtatgccaagttgtcgaaatgtgagttct 15357431  T
Q  302 ggtt 305  Q
    ||||    
T  15357432 ggtt 15357435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 339
Target Start/End: Original strand, 18225408 - 18225535
Alignment:
Q  212 ctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagga 311  Q
    |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||| || |||||||||||||| || |||||||| ||    
T  18225408 ctgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaaga 18225507  T
Q  312 agtgagtttccttggtcatgtgatttct 339  Q
    |||   ||| ||||| ||||| ||||||    
T  18225508 agtaccttttcttggccatgttatttct 18225535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 266
Target Start/End: Original strand, 17093068 - 17093165
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| || ||||| |||||||||||    
T  17093068 tttgtggttgtgtttatcgacgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaa 17093165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 16234920 - 16235008
Alignment:
Q  178 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
    |||||||| || ||||||||| | || || ||| |||| ||||| ||||| |||||| ||| |||||| |||||||| |||||||||||    
T  16234920 gtgttcatcgacgatattttgatttactccaagactgaagaagaacatgccgagcatctgaagattgttttgcaagtgttgaaagagaa 16235008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 308
Target Start/End: Original strand, 18613786 - 18613882
Alignment:
Q  212 ctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaa 308  Q
    |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||| || |||||||||||||| || ||||||||    
T  18613786 ctgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgcaaaattgtctaagtgtgaattctggttgaa 18613882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 339
Target Start/End: Original strand, 29451654 - 29451886
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || |||||  |||| || ||| ||| ||||||    ||||| ||||| || || |||||||||||  | |||||    
T  29451654 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtatttattgatgatattttaatctattc 29451753  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     |||  |||||| |||||||| || ||| |||| ||||| |||||||| ||||| || ||    |||| ||| |||||||| || |||||||| |||||     
T  29451754 caagaatgaggaggagcatgcagatcatctgagaattgtattgcaagtgttgaaggaaaagagattgtatgcaaagttgtcgaaatgtgagttctggtta 29451853  T
Q  307 aaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  |||||||| || || |||||| | ||||||    
T  29451854 agtgaagtgagctttctgggtcatattatttct 29451886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 16353474 - 16353523
Alignment:
Q  217 gaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
    ||||| |||||||||||| ||| |||||| |||||||| |||||||||||    
T  16353474 gaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaa 16353523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 339
Target Start/End: Original strand, 29037437 - 29037493
Alignment:
Q  283 ttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  29037437 ttgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 29037493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 305; Significance: 1e-171; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 11 - 351
Target Start/End: Original strand, 24829749 - 24830089
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24829749 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 24829848  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24829849 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 24829948  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24829949 tctgaggaagagcatgcggagcatttgaggattgtgttgcaattcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttcaagg 24830048  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  24830049 aagtgagtttccttggtcatgtgatttctaagggtggtatt 24830089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 38 - 351
Target Start/End: Complemental strand, 22279960 - 22279647
Alignment:
Q  38 atatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaat 137  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||    
T  22279960 atatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccatgtgtctttatggaatacat 22279861  T
Q  138 gaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttg 237  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||  |||| ||||||||||||||||||    
T  22279860 gaatagaatattttatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaaatcgaaggaggagcatgctgagcatttg 22279761  T
Q  238 aggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgattt 337  Q
    ||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22279760 aggattgtgttgcaagtattgaaagagaaccagttatgtgcaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttggtcatgtgattt 22279661  T
Q  338 ctaagggtggtatt 351  Q
    ||||| ||||||||    
T  22279660 ctaagtgtggtatt 22279647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 11 - 351
Target Start/End: Original strand, 24568229 - 24568569
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||| ||||| ||||||||||| ||||||||||||||  |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  24568229 atcatcatattagagtgaaggcggaagatatatccaaaaccacgttccaaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaa 24568328  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    |||  |||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||| |||    
T  24568329 tgcatcaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtgttgtttatagattatattttggtgtattcgaag 24568428  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||| ||||  ||    
T  24568429 tctgaggaggagcatgttgagcatttgaggattgtgttgcaagtcttgaaggagaaccagttatgtgctaagttgtctaagtgtgagttttagttgcggg 24568528  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  24568529 aagtgagtttccttggtcatgtgatttctaagggtggtatt 24568569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 11 - 351
Target Start/End: Original strand, 22760130 - 22760470
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||| ||||| ||||||||||| |||||||||||||| | ||||  ||| ||||||||||||||||||||||||||||||||||||||||||||  |    
T  22760130 atcatcatattagagtgaaggcggaagatatatccaaaaccgtgttcaaaacaaggtatggacactatgagtattctgtgatgccatttggagtatccga 22760229  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    ||||| ||||||||| ||||| || ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||  ||     
T  22760230 tgcgctaggtgtcttcatggagtatatgaatagaatatttcatccttacctggaccgttttgtggtggtgtttatagatgatattttggtgtatttgaaa 22760329  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    |||||||| ||||||||| ||||| ||||||||||||||||||| ||| | ||||||||||| ||||| ||||||||||||||| ||||||||||| |||    
T  22760330 tctgaggaggagcatgctaagcatctgaggattgtgttgcaagttttggaggagaaccagttatgtgctaagttgtctaagtgtaagttttggttgcagg 22760429  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    ||||||||||||||||||||||||||| |||||||| ||||    
T  22760430 aagtgagtttccttggtcatgtgatttttaagggtgatatt 22760470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 11 - 350
Target Start/End: Complemental strand, 25130491 - 25130152
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  25130491 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctatgatgccatttggagtatccaa 25130392  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    |||||||||||||||  ||||||| ||||||||||||||||||||||  |||||||| |||||||||||||| ||| ||||||||||||| ||| | |||    
T  25130391 tgcgccaggtgtcttcctggaatatatgaatagaatatttcatcctttcctggaccgctttgtggtggtgtttatatatgatattttggtatatacgaag 25130292  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    |||||||| ||||||||||||||||||||| ||||||||| |||||| || ||||| | ||| ||||| |||||||  ||||||||||||||||||  |     
T  25130291 tctgaggaggagcatgctgagcatttgagggttgtgttgcgagtcttaaaggagaatcggttatgtgctaagttgttgaagtgtgagttttggttgcgga 25130192  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtat 350  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  25130191 aagtgagtttctttggtcatgtgatttctaagggtggtat 25130152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 25 - 335
Target Start/End: Original strand, 10037907 - 10038217
Alignment:
Q  25 gtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtct 124  Q
    |||||| | |||||||| | ||||||||| || |||||||||||||| |||||||| || | ||||||| ||||||| ||  |||||||||  |||||||    
T  10037907 gtgaagacagaggatattttcaaaactgcatttcgaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtct 10038006  T
Q  125 ttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagca 224  Q
    | |||||||| ||||||||||| || ||||||||| |||| |  ||| |||||||||| ||||| ||||| ||| ||||||| ||||| ||||| |||||    
T  10038007 tcatggaatacatgaatagaatcttccatccttatttggatcagtttatggtggtgtttatagacgatatcttgatgtattcgaagtcagaggaggagca 10038106  T
Q  225 tgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttcctt 324  Q
    ||| |||||| | ||||||||||||||    |||||||||||  |||||| ||  |||||||| ||||||||||||| ||||  ||||||||||||||||    
T  10038107 tgcagagcatctaaggattgtgttgcatactttgaaagagaataagttgtttgataagttgtcaaagtgtgagttttagttgcgggaagtgagtttcctt 10038206  T
Q  325 ggtcatgtgat 335  Q
    |||||||||||    
T  10038207 ggtcatgtgat 10038217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 25 - 335
Target Start/End: Original strand, 10098292 - 10098602
Alignment:
Q  25 gtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtct 124  Q
    |||||| | |||||||| | ||||||||| || |||||||||||||| |||||||| || | ||||||| ||||||| ||  |||||||||  |||||||    
T  10098292 gtgaagacagaggatattttcaaaactgcatttcgaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtct 10098391  T
Q  125 ttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagca 224  Q
    | |||||||| ||||||||||| || ||||||||| |||| |  ||| |||||||||| ||||| ||||| ||| ||||||| ||||| ||||| |||||    
T  10098392 tcatggaatacatgaatagaatcttccatccttatttggatcagtttatggtggtgtttatagacgatatcttgatgtattcgaagtcagaggaggagca 10098491  T
Q  225 tgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttcctt 324  Q
    ||| |||||| | ||||||||||||||    |||||||||||  |||||| ||  |||||||  ||||||||||||| ||||  ||||||||||||||||    
T  10098492 tgcggagcatctaaggattgtgttgcatactttgaaagagaataagttgtttgataagttgttaaagtgtgagttttagttgcgggaagtgagtttcctt 10098591  T
Q  325 ggtcatgtgat 335  Q
    |||||||||||    
T  10098592 ggtcatgtgat 10098602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 256 - 351
Target Start/End: Original strand, 12639039 - 12639134
Alignment:
Q  256 ttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    ||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12639039 ttgaaagagaatcagttatgtgctaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatt 12639134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 82 - 339
Target Start/End: Original strand, 30010816 - 30011073
Alignment:
Q  82 tattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgt 181  Q
    |||||||||||||| ||  | ||  ||||||||||||| || |||||| |||| |||||| | || |||||| |||||||||| |||||||| || ||||    
T  30010816 tattctgtgatgcctttcagtgttactaatgcgccaggagtgtttatgaaatatatgaatcgtatttttcatacttatctggatcgttttgttgtcgtgt 30010915  T
Q  182 tcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaa 281  Q
    | ||||||||||||||| | || || ||||| ||||| || ||||  ||||||||||| ||||| ||||||||  || |||||||  |||| | ||||||    
T  30010916 ttatagatgatattttgatatactccaagtccgaggaggaacatgtcgagcatttgagaattgttttgcaagtgctgcaagagaagaagttatatgccaa 30011015  T
Q  282 gttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    ||| || | ||| || || |||||||| ||||||||||| || |||||| | ||||||    
T  30011016 gttatcgatgtgcgaattctggttgaacgaagtgagttttctcggtcatattatttct 30011073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 178 - 339
Target Start/End: Original strand, 21143769 - 21143930
Alignment:
Q  178 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 277  Q
    |||||||| |||||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||    
T  21143769 gtgttcatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatg 21143868  T
Q  278 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |||| ||||||||||||||||| |||||||| ||||||||||| ||||| ||||| ||||||    
T  21143869 ccaaattgtctaagtgtgagttctggttgaaagaagtgagttttcttggccatgttatttct 21143930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 107 - 340
Target Start/End: Complemental strand, 23112522 - 23112289
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    ||||||||||  |||| |||||||| || ||||||||||| || ||| |||||||||| |  ||||| || ||||| || |||||||| ||| | |||||    
T  23112522 ctaatgcgcctagtgtgtttatggagtacatgaatagaattttccatgcttatctggatcagtttgtagttgtgtttattgatgatatcttgatttattc 23112423  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     ||| |||| ||||||||||| |||||||| | ||||||||||||||| ||||| || ||  |||||| |||||||||||| || ||||| || |||||     
T  23112422 taagactgaagaagagcatgcagagcatttaaagattgtgttgcaagtgttgaaggaaaagaagttgtatgccaagttgtccaaatgtgaattctggtta 23112323  T
Q  307 aaggaagtgagtttccttggtcatgtgatttcta 340  Q
    |  ||||| ||||| ||||| ||| | |||||||    
T  23112322 agtgaagtaagttttcttggccatattatttcta 23112289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 107 - 339
Target Start/End: Complemental strand, 27789526 - 27789294
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||| ||||| ||||| || ||||| || |||||| |||| |||||| ||| ||||||    || |||||||| || || ||||||||| || | |||||    
T  27789526 ctaacgcgcccggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattctgatttattc 27789427  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     ||| |||| ||||||||||| || ||| |||| |||||| ||||||| |||||||||||  |||||| |||||| ||||| || |||||||||||| |     
T  27789426 gaagactgaagaagagcatgcagaacatctgagaattgtgctgcaagttttgaaagagaagaagttgtatgccaaattgtcgaaatgtgagttttggcta 27789327  T
Q  307 aaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  ||||||||||||||||||||| | ||||||    
T  27789326 agtgaagtgagtttccttggtcatattatttct 27789294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 181 - 339
Target Start/End: Original strand, 24875481 - 24875639
Alignment:
Q  181 ttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgcca 280  Q
    ||||| |||||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | |||||    
T  24875481 ttcattgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgcca 24875580  T
Q  281 agttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    | ||||||||||||||||| |||||||| ||||||||||| ||||| ||||| ||||||    
T  24875581 aattgtctaagtgtgagttctggttgaaagaagtgagttttcttggccatgttatttct 24875639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 67 - 339
Target Start/End: Original strand, 24818847 - 24819119
Alignment:
Q  67 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggacc 166  Q
    |||||||| || || ||||| |||||||| || || ||  | |||||||||||||| |||||||| ||  ||||| | || |||||| | ||| | || |    
T  24818847 tatggacattacgaatattcagtgatgcctttcggtgttacaaatgcgccaggtgtgtttatggagtacttgaatcgtatttttcatgcgtatttagatc 24818946  T
Q  167 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
    | ||  |||| |||||||| |||||||||||| | || || ||| |||| ||||| ||||||||||||||||||||||| ||||||||  |||| |||||    
T  24818947 gcttcatggttgtgttcattgatgatattttgatatactctaagactgaagaagaacatgctgagcatttgaggattgtcttgcaagtgctgaaggagaa 24819046  T
Q  267 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
      || | | ||| |||||||| ||||||||  | |||||||| ||||| ||||| ||||| ||||| ||||||    
T  24819047 gaagctttatgctaagttgtcaaagtgtgaactctggttgaatgaagtaagttttcttggccatgttatttct 24819119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 82 - 320
Target Start/End: Original strand, 30209549 - 30209787
Alignment:
Q  82 tattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgt 181  Q
    |||| ||||||||| || || ||  |||||||||  || || ||||||||||| ||||||   || |||||| |||||||||| |||||||| || ||||    
T  30209549 tattttgtgatgcctttcggtgttactaatgcgctgggagtgtttatggaatatatgaatcatatttttcatacttatctggatcgttttgttgttgtgt 30209648  T
Q  182 tcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaa 281  Q
    | ||||||||||||||| | || || ||||| ||||| || ||||  || |||||||| ||||| || |||||  ||||||||||  |||| | ||||||    
T  30209649 ttatagatgatattttgatatactccaagtccgaggaggaacatgtcgaacatttgagaattgtttttcaagtgctgaaagagaagaagttatctgccaa 30209748  T
Q  282 gttgtctaagtgtgagttttggttgaaggaagtgagttt 320  Q
    ||| || ||||| || || |||||||| |||||||||||    
T  30209749 gttatcgaagtgcgaattctggttgaacgaagtgagttt 30209787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 320
Target Start/End: Original strand, 23098675 - 23098888
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || |||||||| || |||||| ||| ||||||  | || ||||||||||| || |||||||||||  | |||||    
T  23098675 ctaatgcgcctggtgtatttatggagtatatgaataggatttttcatgcttttctggatagattcgtggtggtgtttattgatgatattttaatttattc 23098774  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     ||| |||| ||||||||||| |||||| |||||||||| || || ||  ||||||||||   ||||| ||| |||||||| || ||||| || |||||     
T  23098775 taagactgaagaagagcatgccgagcatctgaggattgtattacaggttctgaaagagaaaatgttgtatgctaagttgtcgaaatgtgaattctggtta 23098874  T
Q  307 aaggaagtgagttt 320  Q
    |  |||||||||||    
T  23098875 agtgaagtgagttt 23098888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 124 - 339
Target Start/End: Complemental strand, 27373038 - 27372823
Alignment:
Q  124 tttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagc 223  Q
    ||||||||||| |||||| | || || ||| | | | |||| || |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |    
T  27373038 tttatggaatatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaac 27372939  T
Q  224 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttcct 323  Q
    ||||||||||| ||| |||||| |||||||| |||||||||||  || | | ||| || |||||||||||||| || |||||||| ||||||||||| ||    
T  27372938 atgctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttct 27372839  T
Q  324 tggtcatgtgatttct 339  Q
     || ||||| ||||||    
T  27372838 aggccatgttatttct 27372823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 340
Target Start/End: Original strand, 41607104 - 41607275
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||      
T  41607104 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 41607203  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttcta 340  Q
    || | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| |||||||    
T  41607204 agctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttcta 41607275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 169 - 339
Target Start/End: Complemental strand, 24711758 - 24711588
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||      
T  24711758 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 24711659  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    || | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  24711658 agctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 24711588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 169 - 320
Target Start/End: Complemental strand, 23295659 - 23295508
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || ||||| ||  || | ||||||||| |||| ||||||||||| || ||| ||| ||||||||| ||||| |||||||||||      
T  23295659 tttgtggttgtgtttattgatgacatcctgatttattcaaagactgaagaagagcatgcagaacatctgaagattgtgttacaagttttgaaagagaaaa 23295560  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagttt 320  Q
    |||||| ||| |||||||| ||||||||||| ||||| |  |||||||||||    
T  23295559 agttgtatgctaagttgtcgaagtgtgagttctggttaattgaagtgagttt 23295508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 187 - 318
Target Start/End: Complemental strand, 24950296 - 24950165
Alignment:
Q  187 gatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 286  Q
    ||||||||| || | ||||||||| |||| ||||||||||| || ||| ||| ||||||||||||| | |||||||||||  |||||| ||| |||||||    
T  24950296 gatgatattctgatttattcaaagactgaagaagagcatgcagaacatctgaagattgtgttgcaaatattgaaagagaaaaagttgtatgctaagttgt 24950197  T
Q  287 ctaagtgtgagttttggttgaaggaagtgagt 318  Q
    | ||||||||||| ||||| |  |||||||||    
T  24950196 cgaagtgtgagttatggttaagtgaagtgagt 24950165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 107 - 320
Target Start/End: Complemental strand, 23278562 - 23278349
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| || ||||| || |||||  |||| || ||| ||||||||||   ||| ||||| || || || ||||| ||| || | |||||    
T  23278562 ctaatgcgcctggtgtgttcatggagtatatgaaccgaattttccatgcttatctggataatttcgtggttgtttttattgatgacattctgatttattc 23278463  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     ||| |||| ||||||||||| || ||| ||| ||||||||||||| | |||||||||||  |||||| ||| |||||||| ||||| ||||| |||||     
T  23278462 taagactgaagaagagcatgcagaacatctgaagattgtgttgcaaatattgaaagagaaaaagttgtatgctaagttgtcgaagtgcgagttctggtta 23278363  T
Q  307 aaggaagtgagttt 320  Q
    |  |||||||||||    
T  23278362 agtgaagtgagttt 23278349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 169 - 338
Target Start/End: Complemental strand, 27219740 - 27219571
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| || ||||| |||||||||||      
T  27219740 tttgtggttgtgtttatcgacgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaaga 27219641  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 338  Q
    || | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| |||||    
T  27219640 agctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttc 27219571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 190 - 338
Target Start/End: Complemental strand, 16927063 - 16926915
Alignment:
Q  190 gatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtcta 289  Q
    ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| || ||||| |||||||||||  || | | ||| || |||||||    
T  16927063 gatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaagctttatgctaaattgtcta 16926964  T
Q  290 agtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 338  Q
    ||||||| || |||||||| || |||||||||||||| ||||| |||||    
T  16926963 agtgtgaattctggttgaaagaggtgagtttccttggccatgttatttc 16926915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 190 - 338
Target Start/End: Complemental strand, 17000703 - 17000555
Alignment:
Q  190 gatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtcta 289  Q
    ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| || ||||| |||||||||||  || | | ||| || |||||||    
T  17000703 gatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaagctttatgctaaattgtcta 17000604  T
Q  290 agtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 338  Q
    ||||||| || |||||||| || |||||||||||||| ||||| |||||    
T  17000603 agtgtgaattctggttgaaagaggtgagtttccttggccatgttatttc 17000555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 339
Target Start/End: Original strand, 23106450 - 23106617
Alignment:
Q  172 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 271  Q
    ||||| || ||||| |||||||||||| | || || |||||||| ||||| |||||||||||||||| | | || |||||||| |||||||||||  ||     
T  23106450 gtggttgttttcattgatgatattttgatttactccaagtctgaagaagaacatgctgagcatttgaagctggttttgcaagtgttgaaagagaagaagc 23106549  T
Q  272 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    | | ||| || ||||||||||| || || ||||| || |||||||| || ||||| ||||| ||||||    
T  23106550 tttatgcgaaattgtctaagtgcgaattatggttaaaagaagtgagctttcttggacatgttatttct 23106617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 169 - 339
Target Start/End: Complemental strand, 24264094 - 24263924
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| || || |||| ||||||| ||| |||||| |||||||| |||||||||||      
T  24264094 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaggaacatgttgagcatctgaagattgttttgcaagtgttgaaagagaaga 24263995  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    || | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  24263994 agctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 24263924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 339
Target Start/End: Complemental strand, 9485919 - 9485770
Alignment:
Q  190 gatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtcta 289  Q
    ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| || ||||| |||||||||||  || | | ||| || |||||||    
T  9485919 gatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaagctttatgctaaattgtcta 9485820  T
Q  290 agtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    ||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  9485819 agtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 9485770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 338
Target Start/End: Complemental strand, 10870574 - 10870405
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| || ||||| |||||||||||      
T  10870574 tttgtggttgtgtttatcgacgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaaga 10870475  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 338  Q
    |  | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| |||||    
T  10870474 aactttatgcgaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttc 10870405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 107 - 339
Target Start/End: Complemental strand, 12576139 - 12575907
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||| ||||| ||||| || ||||| || |||||| |||| |||||| ||| | ||||    || |||||||| || || ||||| ||| || | |||||    
T  12576139 ctaacgcgcccggtgtattcatggagtatatgaatcgaatttttcatgcttttttggataaattcgtggtggtatttattgatgacattctgatttattc 12576040  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     ||| |||| ||||||||||| || ||| |||| |||||||||||||| |||||||| |   |||||| ||||||  |||| || ||||| |||||| |     
T  12576039 gaagactgaagaagagcatgcagaacatctgagaattgtgttgcaagttttgaaagaaaggaagttgtatgccaaactgtcgaaatgtgaattttggcta 12575940  T
Q  307 aaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  ||||||||||||||||||||| | ||||||    
T  12575939 agtgaagtgagtttccttggtcatattatttct 12575907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 339
Target Start/End: Original strand, 22734511 - 22734663
Alignment:
Q  187 gatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 286  Q
    |||||||||||  | || || |||||||| ||||| |||||||||||||||| | | || |||||||| |||||||||||  || | | ||| || ||||    
T  22734511 gatgatattttaatttactccaagtctgaagaagaacatgctgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcgaaattgt 22734610  T
Q  287 ctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |||||||| | || |||||||| |||||||| || ||||| ||||| ||||||    
T  22734611 ctaagtgtaaattctggttgaaagaagtgagctttcttggacatgttatttct 22734663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 320
Target Start/End: Original strand, 27208894 - 27209042
Alignment:
Q  172 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 271  Q
    ||||||||||| ||||||||||||||| | ||||| ||| |||| || | |||||| |||||  ||| ||||||||||||  | ||||||||||   |||    
T  27208894 gtggtggtgtttatagatgatattttgatttattctaagactgaagaggtgcatgcagagcacctgaagattgtgttgcagattttgaaagagagaaagt 27208993  T
Q  272 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagttt 320  Q
    ||| |||||| ||||| ||||| ||||| ||||| |  |||||||||||    
T  27208994 tgtatgccaacttgtcgaagtgcgagttctggttaagtgaagtgagttt 27209042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 338
Target Start/End: Original strand, 44384298 - 44384458
Alignment:
Q  178 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 277  Q
    |||||||| || ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| || ||||| |||||||||||  |  | | ||    
T  44384298 gtgttcatcgacgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatg 44384397  T
Q  278 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 338  Q
    | || |||||||||||||| || |||||||| ||||||||||| || || ||||| |||||    
T  44384398 ctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttc 44384458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 329
Target Start/End: Complemental strand, 1065537 - 1065315
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || |||||| |||| || ||| ||| ||||||    ||||||||||| || || |||||||||||  | |||||    
T  1065537 ctaatgcgcctggtgtttttatggagtacatgaatcgaatcttccatgcttttctggataagtttgtggtggtatttattgatgatattttaatctattc 1065438  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     |||  |||||| |||||||| |||||| |||| || ||||||||||| ||||| || ||   ||||| ||| ||||| || || |||||||| || ||     
T  1065437 caagaatgaggaggagcatgcagagcatctgagaatagtgttgcaagtgttgaaggaaaagaggttgtatgctaagttatcaaaatgtgagttctgatta 1065338  T
Q  307 aaggaagtgagtttccttggtca 329  Q
    || ||||| ||||| || |||||    
T  1065337 aatgaagtaagttttctgggtca 1065315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 339
Target Start/End: Original strand, 24706213 - 24706371
Alignment:
Q  181 ttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgcca 280  Q
    ||||| |||||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||| |    
T  24706213 ttcattgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgcta 24706312  T
Q  281 agttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    | || ||||| |||||||| |||||||| || || ||||| ||||| ||||| ||||||    
T  24706313 aattatctaaatgtgagttctggttgaaagaggtaagttttcttggccatgttatttct 24706371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 178 - 339
Target Start/End: Complemental strand, 23189633 - 23189473
Alignment:
Q  178 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 277  Q
    ||||| ||||| ||||||||| | || || ||| |||||||||| |||||||||||| ||| |||||| || ||||| |||||||||||  |  | | ||    
T  23189633 gtgtttatagacgatattttgatttactccaagactgaggaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatg 23189534  T
Q  278 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    | || |||||||||||||| || ||||||||| |||| ||||| || || ||||| ||||||    
T  23189533 ctaaattgtctaagtgtga-ttctggttgaagaaagtaagttttctgggccatgttatttct 23189473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 320
Target Start/End: Original strand, 22323618 - 22323726
Alignment:
Q  212 ctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagga 311  Q
    |||| ||||| ||||| |||||| ||| |||||| |||||||| |||||||||||  || | | ||| || |||||||||||||| || |||||||| ||    
T  22323618 ctgaagaagaacatgccgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaaga 22323717  T
Q  312 agtgagttt 320  Q
    |||||||||    
T  22323718 agtgagttt 22323726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 326
Target Start/End: Complemental strand, 25264745 - 25264621
Alignment:
Q  202 tattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtttt 301  Q
    ||||| ||| |||| ||||||||||| || ||| ||| |||||| |||||||| |||||||| ||  |||||| |||||||||||| || |||||||| |    
T  25264745 tattctaagactgaagaagagcatgcagaacatctgaagattgtcttgcaagtgttgaaagaaaagaagttgtatgccaagttgtcaaaatgtgagttct 25264646  T
Q  302 ggttgaaggaagtgagtttccttgg 326  Q
    |||| |  ||||| ||||| |||||    
T  25264645 ggttaagtgaagtaagttttcttgg 25264621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 339
Target Start/End: Complemental strand, 45534610 - 45534494
Alignment:
Q  223 catgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttcc 322  Q
    ||||| ||||||||||| ||||| ||||||||  ||||||||||  |||| | ||||||||| || ||||| || || |||||||| ||||||||||| |    
T  45534610 catgccgagcatttgagaattgttttgcaagtgctgaaagagaagaagttatatgccaagttatcgaagtgcgaattctggttgaacgaagtgagttttc 45534511  T
Q  323 ttggtcatgtgatttct 339  Q
    | |||||| | ||||||    
T  45534510 tcggtcatattatttct 45534494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 167 - 339
Target Start/End: Complemental strand, 23073589 - 23073417
Alignment:
Q  167 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
    |||| ||||| || ||||| |||||||||||| | || || |||||||| ||||| ||| ||   ||||||| | | || || ||||| |||||||||||    
T  23073589 gtttcgtggttgttttcattgatgatattttgatttactccaagtctgaagaagaacatactagccatttgaagttggttttccaagtgttgaaagagaa 23073490  T
Q  267 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
      || | | ||| || |||||||||||||| || |||||||| |||||||| || ||||| ||||| ||||||    
T  23073489 gaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagctttcttggacatgttatttct 23073417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 339
Target Start/End: Original strand, 21323997 - 21324155
Alignment:
Q  181 ttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgcca 280  Q
    ||||| || ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| ||||| |||||  |  | | ||| |    
T  21323997 ttcatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaggagaagaaactttatgcta 21324096  T
Q  281 agttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  | |||||||||||||| |||||||| || || ||||| ||||| ||||| ||||||    
T  21324097 aactatctaagtgtgagttctggttgaaagaggtaagttttcttggccatgtcatttct 21324155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 339
Target Start/End: Complemental strand, 24677201 - 24677043
Alignment:
Q  181 ttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgcca 280  Q
    ||||| |||||||||||  | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| || ||||||||  |  | | ||| |    
T  24677201 ttcatcgatgatattttaatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttaaaagagaagaaactttatgcta 24677102  T
Q  281 agttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    | || |||||||||||||| |||||||| || || ||||| || || ||||| ||||||    
T  24677101 aattatctaagtgtgagttctggttgaaagaggtaagttttctgggccatgttatttct 24677043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 266
Target Start/End: Complemental strand, 9337306 - 9337209
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| || ||||| |||||||||||    
T  9337306 tttgtggttgtgtttatcgacgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaa 9337209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 305
Target Start/End: Original strand, 19717788 - 19717872
Alignment:
Q  221 agcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggtt 305  Q
    ||||||| || ||| ||| |||||| |||||||| |||||||| ||  || ||| ||| |||||||| ||||||||||| |||||    
T  19717788 agcatgcagaacatctgaagattgtattgcaagttttgaaagaaaagaagctgtatgctaagttgtcgaagtgtgagttctggtt 19717872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 299; Significance: 1e-168; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 11 - 351
Target Start/End: Original strand, 5830 - 6172
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5830 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 5929  T
Q  111 tgcgccaggtgtctttatggaa-taaatgaata-gaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 208  Q
    |||||||||||||||||| ||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  5930 tgcgccaggtgtctttattgaaatacatgaataagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcga 6029  T
Q  209 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaa 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6030 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaa 6129  T
Q  309 ggaagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  6130 ggaagtgagtttccttggtcatgtgatttctaagggtggtatt 6172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 212 - 326
Target Start/End: Complemental strand, 14281 - 14167
Alignment:
Q  212 ctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagga 311  Q
    |||| ||||||||||| |||||| ||| ||||||||||||| | |||||||| ||  |||||| ||| |||||||| ||||||||||| ||||| |  ||    
T  14281 ctgaagaagagcatgcagagcatctgaagattgtgttgcaaatattgaaagaaaagaagttgtatgctaagttgtcgaagtgtgagttctggttaattga 14182  T
Q  312 agtgagtttccttgg 326  Q
    ||||||||| |||||    
T  14181 agtgagttttcttgg 14167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 293; Significance: 1e-164; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 11 - 351
Target Start/End: Complemental strand, 7435 - 7095
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7435 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgtcatttggagtatctaa 7336  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||    
T  7335 tgcgccaggtgtttttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaag 7236  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  7235 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgctaagttgtctaagtgtgagttttggttgaagg 7136  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  7135 aagtgagtttccttggtcatttgatttctaagggtggtatt 7095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 11 - 351
Target Start/End: Complemental strand, 493 - 153
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    |||| |||||||| || |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  493 atcaccagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgtcatttggagtatctaa 394  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||    
T  393 tgcgccaggtgtttttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaag 294  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||    
T  293 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagttttgaaagagaaccagttatgtgctaagttttctaagtgtgagttttggttgaagg 194  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  193 aagtgagtttccttggtcatttgatttctaagggtggtatt 153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 285; Significance: 1e-160; HSPs: 3)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 11 - 347
Target Start/End: Original strand, 26290 - 26626
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26290 atcatcagattagagtgaaggcggaagagatatccaaaaccgcgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaa 26389  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    |||||||||||||||| ||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  26390 tgcgccaggtgtctttctggaatgcatgaatagagtatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaag 26489  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  26490 tctgaggaagagcatgctgaacatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgctaagttgtctaagtgtgagttttggttgaagg 26589  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtgg 347  Q
    |||||||||||||||||||||||||||||||||||||    
T  26590 aagtgagtttccttggtcatgtgatttctaagggtgg 26626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 290
Target Start/End: Original strand, 19819 - 19937
Alignment:
Q  172 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 271  Q
    ||||| ||||| || ||||| || ||| | ||||| |||  ||| ||||||||||| || ||| ||| |||||| |||||||| || ||||||||  |||    
T  19819 gtggttgtgtttattgatgacatcttgatttattctaagaatgaagaagagcatgcagaacatctgaagattgtattgcaagtattcaaagagaataagt 19918  T
Q  272 tgtgtgccaagttgtctaa 290  Q
    ||| |||||||||||||||    
T  19919 tgtatgccaagttgtctaa 19937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 301
Target Start/End: Original strand, 25270 - 25315
Alignment:
Q  256 ttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtttt 301  Q
    ||||| ||||| ||||||||||| ||||||||||||||||||||||    
T  25270 ttgaaggagaatcagttgtgtgctaagttgtctaagtgtgagtttt 25315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 281; Significance: 1e-157; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 11 - 351
Target Start/End: Original strand, 1976 - 2316
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||| ||||| ||||||||||| |||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1976 atcatcaaattagagtgaaggcggaagatatatccaaaaccgcattccgaacgaggtatagacactatgagtattctgtgatgccatttggagtatctaa 2075  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  2076 tgcaccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccattttgtggtggtgttaatagatgatattttggtgtattcaaag 2175  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||    
T  2176 tctgaggaagagcatgctgagcatttgaggattatgttgcaggtcttgaaagagaaccagttatgtgctaagttgtctaagtgtgagttttggttggagg 2275  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  2276 aagtgagtttccttggtcatgtgatttataagggtggtatt 2316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 15 - 351
Target Start/End: Complemental strand, 26605 - 26270
Alignment:
Q  15 tcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcg 114  Q
    |||||| || ||||||||||| ||||||||||| || || |||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  26605 tcagatgagagtgaaggcggaagatatatccaataccgctttccgaacaaggtatggacactatgagtattctgtgatgtcatttagagtatctaatgcg 26506  T
Q  115 ccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctg 214  Q
    ||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||| |||| ||  |||| |||||||||||||| |||   |    
T  26505 ccaggtgtcttcatggaatatatgaatagaatatttcatccttttctggaccgttttgtggtgatgtttatttatgacattttggtgtattcgaagatcg 26406  T
Q  215 aggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagt 314  Q
    ||||  |||||| |||||| ||||| |||||||||   ||||||||||| ||  ||||||  || ||||| || ||||||||||||||||||  ||||||    
T  26405 aggagtagcatgttgagca-ttgagaattgtgttgggtgtcttgaaagaaaagaagttgttagctaagttttcgaagtgtgagttttggttgcgggaagt 26307  T
Q  315 gagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    || ||||||||||||||||||||| || |||||||||    
T  26306 gactttccttggtcatgtgatttcgaaaggtggtatt 26270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 11 - 351
Target Start/End: Complemental strand, 34367 - 34027
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||||| |||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  34367 atcatcagattagagtaaaggcggaagatatacccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 34268  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    ||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  34267 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaag 34168  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||| |||    
T  34167 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgcaaagttgtctaagtgtgaattttggttggagg 34068  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  34067 aagtaagtttccttggtcatgtgatttctaagggtggtatt 34027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 277; Significance: 1e-155; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 11 - 351
Target Start/End: Original strand, 8850 - 9190
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    |||||||||| ||||| |||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8850 atcatcagataagggtaaaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 8949  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    ||| |||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  8950 tgcaccaggtgtctttatgggatacatgaatagaatatttcatccttatctggatcgttttgtgatggtgttcatagatgatattttggtgtattcaaag 9049  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||  ||||| |||||||||||||||||||||||||    
T  9050 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtattgaaagagaactagttatgtgttaagttatctaagtgtgagttttggttgaagg 9149  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  9150 aagtgagtttccttggtcatgtgatttctaagggtggtatt 9190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 166 - 339
Target Start/End: Complemental strand, 55882 - 55709
Alignment:
Q  166 cgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagaga 265  Q
    ||||| ||||| || ||||| ||||| |||||| | || || ||| |||||||||| |||| ||||||||||| || ||| |||||||| ||||||||||    
T  55882 cgtttcgtggttgttttcattgatgacattttgatttactccaagactgaggaagaacatgttgagcatttgaagactgttttgcaagtgttgaaagaga 55783  T
Q  266 accagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  |  | | ||| || || || |||||||| || |||||||| || |||||||| ||||| ||||| ||||||    
T  55782 agaaactttatgctaaattatcaaagtgtgaattctggttgaaagaggtgagttttcttggacatgttatttct 55709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 337
Target Start/End: Complemental strand, 40711 - 40588
Alignment:
Q  214 gaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaag 313  Q
    |||||||| |||||||||||||||| || ||| |||||||| |||||||||||  |  | | ||| || || ||||||||||| || |||||||| || |    
T  40711 gaggaagatcatgctgagcatttgaagactgttttgcaagtgttgaaagagaagaaactttatgctaaattatctaagtgtgaattctggttgaaagagg 40612  T
Q  314 tgagtttccttggtcatgtgattt 337  Q
    ||||||| ||||| ||||| ||||    
T  40611 tgagttttcttggccatgttattt 40588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 337
Target Start/End: Complemental strand, 74431 - 74308
Alignment:
Q  214 gaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaag 313  Q
    |||||||| |||||||||||||||| || ||| |||||||| |||||||||||  |  | | ||| || || ||||||||||| || |||||||| || |    
T  74431 gaggaagatcatgctgagcatttgaagactgttttgcaagtgttgaaagagaagaaactttatgctaaattatctaagtgtgaattctggttgaaagagg 74332  T
Q  314 tgagtttccttggtcatgtgattt 337  Q
    ||||||| ||||| ||||| ||||    
T  74331 tgagttttcttggccatgttattt 74308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 265; Significance: 1e-148; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 11 - 351
Target Start/End: Original strand, 7885 - 8225
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7885 atcatcagattagagtaaaggcgaaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 7984  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||| |||    
T  7985 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttttggtggtgtttatagatgatattttagtgtattcgaag 8084  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    || ||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||    
T  8085 tcggaggaagagcatgttgagcatctgaggattgtgttgcaagttttgaaagagaaccagttatgtgctaagttgtctaagtgtgtgttttggttgaagg 8184  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  8185 aagtgagtttccttggtcatgtgatttctaatggtggtatt 8225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 107 - 326
Target Start/End: Complemental strand, 16298 - 16079
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || |||||  |||| || ||| ||||||||||    |||||||| ||||| || ||||| || ||  | |||||    
T  16298 ctaatgcgcctggtgtgtttatggagtatatgaacggaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttaatttattc 16199  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     | | |||| ||||||||||| |||||| ||| |||||| |||||||| ||||| || ||   ||||| |||||||||||| || ||||| ||||||||     
T  16198 tacgactgaagaagagcatgcagagcatctgaagattgtattgcaagtgttgaaggaaaagaggttgtatgccaagttgtcaaaatgtgaattttggtta 16099  T
Q  307 aaggaagtgagtttccttgg 326  Q
    |  ||||| ||||| |||||    
T  16098 agtgaagtaagttttcttgg 16079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 261; Significance: 1e-145; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 11 - 351
Target Start/End: Complemental strand, 24458 - 24118
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| ||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||    
T  24458 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgttccgaacaaggtatggacactatgagtatgctgtgatgccatttggagtatcgaa 24359  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    ||||| |||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||     
T  24358 tgcgctaggtgtctttgtggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtatattcgaaa 24259  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||| | ||||||||| ||||| ||||||||||||||||||||||||||| |||    
T  24258 tctgaggaggagcatgctgagcatttgaggattgtgttgcaagttttgaaggggaaccagttatgtgctaagttgtctaagtgtgagttttggttgcagg 24159  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  24158 aagtgagtttccttggtcatgtgatttctaagggtggtatt 24118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 124 - 339
Target Start/End: Complemental strand, 8189 - 7974
Alignment:
Q  124 tttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagc 223  Q
    |||||||| || |||||| | || |||||| | | | |||| ||||||||||| || ||||| |||||||||||| | || || | |||||| ||||| |    
T  8189 tttatggagtacatgaatcgcatctttcatgcatttttggatcgttttgtggttgttttcattgatgatattttgatttactccatgtctgaagaagaac 8090  T
Q  224 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttcct 323  Q
    ||||| ||||||||| | | || |||||||| |||||||||||  || | | ||| || |||||||||||||| || |||||||| |||||||| || ||    
T  8089 atgctaagcatttgaagctagttttgcaagtgttgaaagagaagaagctttatgcgaaattgtctaagtgtgaattctggttgaaagaagtgagctttct 7990  T
Q  324 tggtcatgtgatttct 339  Q
    ||| ||||| ||||||    
T  7989 tggacatgttatttct 7974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 11 - 351
Target Start/End: Original strand, 6953 - 7293
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  6953 atcatcagattagagtgaaggcggaagatatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 7052  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    ||| ||||||||||| || || || ||||||| |||||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||  |||    
T  7053 tgcaccaggtgtcttcattgagtatatgaataaaatatttcatccttatctggaccgttttatggtggtgtttataaatgatattttggtgtatttgaag 7152  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||| |||    
T  7153 tctgaggaggagcatgctgagcatttgaggattgtgttgcaagtcttgaaggagaaccagttatgtgctaagttgtctaagtgtgagttttggttgcagg 7252  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  7253 aagtgagtttccttggtcatatgatttctaagggtggtatt 7293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 257; Significance: 1e-143; HSPs: 4)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 11 - 351
Target Start/End: Original strand, 132513 - 132853
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || ||||| || ||||||||| |||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  132513 atcatcagattagagtaaaggctgaagatatatcccaaaccgcgttccgaacgagatatggacactatgagtactctgtgatgccatttggagtatctaa 132612  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    |||||| ||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||| || |||||||||||||| |||||||| |||    
T  132613 tgcgcccggtgtctttatggaatacatgaatagaatattttatccttatctggactgttttgtggtggtctttatagatgatattttagtgtattcgaag 132712  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  132713 tttgaggaagagcatgctgagcatttgaggattgtgttgcaagttttgaaagagaaccagttatgtgctaagttgtctaagtgtgagttttggttgaagg 132812  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  132813 aagtgagtttccttggtcatgtgatttctatgggtggtatt 132853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 177 - 351
Target Start/End: Complemental strand, 25942 - 25768
Alignment:
Q  177 ggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgt 276  Q
    |||||||||||||||||||||||| ||||| || ||||||||||| |||||||||||||||||||||||||||||||  ||||| ||||||||| | |||    
T  25942 ggtgttcatagatgatattttggtatattcgaaatctgaggaagaacatgctgagcatttgaggattgtgttgcaagatttgaaggagaaccagctatgt 25843  T
Q  277 gccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    || |||||  |||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||    
T  25842 gctaagtttcctaagtgtgagttttggttgcaggaagtaagtttcattggtcatgtgatttctaagggtggtatt 25768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 26049 - 25938
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    |||||| |||||| ||||||||||| |||||||||| ||| ||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||  ||    
T  26049 atcatccgattagagtgaaggcggaagatatatccataaccgcgttccaaacgaagtatggacactatgagtattctgtgatgccatttagagtatgcaa 25950  T
Q  111 tgcgccaggtgt 122  Q
    ||||||||||||    
T  25949 tgcgccaggtgt 25938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 208 - 338
Target Start/End: Original strand, 85451 - 85581
Alignment:
Q  208 aagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttga 307  Q
    |||||||| ||||| |||||||||||||||| | |||| |||||||| |||||||||||  || | | ||| || ||||||||||| || || |||||||    
T  85451 aagtctgaagaagaacatgctgagcatttgaagcttgttttgcaagtgttgaaagagaagaagctttatgcgaaattgtctaagtgcgaattctggttga 85550  T
Q  308 aggaagtgagtttccttggtcatgtgatttc 338  Q
    | |||||||| || ||||| ||||| |||||    
T  85551 aagaagtgagctttcttggacatgttatttc 85581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1488 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: scaffold1488
Description:

Target: scaffold1488; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 11 - 351
Target Start/End: Original strand, 827 - 1166
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||    
T  827 atcatcagattagagtgaaggcggaagatatatccaaaactgtgttccgaacgaggtatgaacactatgagtattctgtgatgccatttggagtatccaa 926  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    |||||||| |||||| |||||||| |||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||| |||||||||||| |||    
T  927 tgcgccagttgtcttcatggaatatatgaatagaatatttcatccttatttggaccattttgtggtggtgtttatagatgata-tttggtgtattcgaag 1025  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||| |||||||| ||||||||| |||    
T  1026 tctgaggaggagcatgctgagcatttgaggattgtgttgcaagttttgaaagagaaccagttatgtgctaagttgtcgaagtgtgaattttggttgcagg 1125  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    ||||||||||||||||||| |||||||| ||||| ||||||    
T  1126 aagtgagtttccttggtcacgtgatttcgaagggaggtatt 1166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 237; Significance: 1e-131; HSPs: 2)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 11 - 351
Target Start/End: Original strand, 970 - 1310
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| ||||||||||| |||||| | |||||   ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||    
T  970 atcatcagattagagtgaaggcggaagatatacctaaaaccatgttccgaacgaggtatggacactatgagtattctgtgatgccatttgcagtatccaa 1069  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||    
T  1070 tgcgccaggtatcttcatggaatatatgaatagaatatttcatccttatctggaccgttttatggtggtgtttatagatgatattttggtgtattcgaag 1169  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||| || ||||| ||||||||||||| |||| ||     
T  1170 tctgaggaggagcatgctgagcatttgaggattgtgttgcaagtcttgaaggagaaccaattatgtgctaaattgtcgaagtgtgagttttagttgcaga 1269  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  1270 aagtgagtttcctttgtcatgtgatttctaagggtggtatt 1310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 256 - 351
Target Start/End: Complemental strand, 4571 - 4476
Alignment:
Q  256 ttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    ||||| ||||| ||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||    
T  4571 ttgaaggagaatcagttgtgtgctaagttgtctaagtgtgagttttggttgcgggaagtgagtttccttggtcatgtgatttctaagggtgttatt 4476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 11 - 351
Target Start/End: Complemental strand, 16340 - 16000
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||| |||||  |||| ||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||    
T  16340 atcatcaaattagaatgaatgcggaagatatatctaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccattttgagtatccaa 16241  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    |||| |||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||    
T  16240 tgcgtcaggtgtcttcatggaatacatgaatagaatatttcaaccttatctggaccgttttgtggtgatgtttatagatgatattttggtgtattcgaag 16141  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||| || |||||| ||||||||| |||    
T  16140 tctgaggaggagcatgttgagcatttgaggattgtgttgcaagtcttgaaggagaaccagttatgtgctaagttgtttacgtgtgaattttggttgcagg 16041  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  16040 aagtgagtttccctggtcatgtgatttctaagggtggtatt 16000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 11 - 351
Target Start/End: Original strand, 1908 - 2239
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||||| |||||||||||||| |||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  1908 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttctgatcgaggtatggacactatgagtattcggtgatgccatttggagtatctaa 2007  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    ||| ||||||||||| ||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||     
T  2008 tgcaccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggactgttttgtggtggtgttcatagatgatattttggtgtattcgaaa 2107  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    ||||||||          |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||  ||    
T  2108 tctgagga---------cgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttatgtgcaaagttgtctaagtgtgagttttggttgcggg 2198  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  2199 aagtgagtttccttggtcatgtgatttctaagggtggtatt 2239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 229; Significance: 1e-126; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 11 - 351
Target Start/End: Original strand, 31447 - 31786
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||| ||||| ||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||  |||||| ||    
T  31447 atcatcatattagagtgaaggcggaagatatattcaaaaccgcgttccgaacgaggtatggacactatgagtattatgtgatgccatttaaagtatccaa 31546  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    ||| ||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||| |||    
T  31547 tgcaccaggtgtcttcatggaatatatgaatagaatatttcatccttatctggactgttttgtggtggtttttatagatgatattttggtgtattcgaag 31646  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    | |||||||||||||||||||||||||||||||||  ||| | ||||||| ||||||||||| ||||| |||||||| ||||||||||||||||||  ||    
T  31647 tttgaggaagagcatgctgagcatttgaggattgt-atgcgaatcttgaacgagaaccagttatgtgctaagttgtcgaagtgtgagttttggttgcggg 31745  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  31746 aagtgagtttccttggtcatgtgatttctaagggtggtatt 31786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 69 - 351
Target Start/End: Complemental strand, 7438 - 7156
Alignment:
Q  69 tggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgt 168  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| || ||||||| ||||||||||||||||||| |||||    
T  7438 tggacactatgagtattatgtgatgccatttggagtatctaatgcgccaggtgtcttcatggagtatatgaatataatatttcatccttatctgaaccgt 7339  T
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||||| ||||||||||||||||||||| ||||| || |||||||| ||||||| ||||||| |||||||||||||| ||||||| ||||||||||    
T  7338 tttgtggtggagttcatagatgatattttggtatattcgaaatctgaggaggagcatgttgagcatatgaggattgtgttgtaagtcttaaaagagaacc 7239  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||| ||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  7238 agttatgtgctaagttgtctaagtgtgagttttggttgcaggaagtgagtttcctgggtcatgtgatttctaagggtggtatt 7156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 11 - 306
Target Start/End: Original strand, 21871 - 22165
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||| ||||| ||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||  |||||| ||    
T  21871 atcatcatattagagtgaaggcggaagatatattcaaaaccgcgttccgaacgaggtatggacactatgagtattatgtgatgccatttaaagtatccaa 21970  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    ||| ||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||| |||    
T  21971 tgcaccaggtgtcttcatggaatatatgaatagaatatttcatccttatctggactgttttgtggtggtttttatagatgatattttggtgtattcgaag 22070  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
    | |||||||||||||||||||||||||||||||||  ||| | ||||||| ||||||||||| ||||| |||||||| ||||||||||||||||||    
T  22071 tttgaggaagagcatgctgagcatttgaggattgt-atgcgaatcttgaacgagaaccagttatgtgctaagttgtcgaagtgtgagttttggttg 22165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 11 - 347
Target Start/End: Original strand, 7029 - 7361
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||| ||||| ||||||||||| |||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||    
T  7029 atcatcatattagagtgaaggcggaagatatatccaaaacagcgttccaaacgaggtatggacactatgggtattctgtgatgccatttggagtatccaa 7128  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||     
T  7129 tgcgccaggtatcttcatggaatatatgaatagaatatttcatccttatatggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaa 7228  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    |||||||| |||||||||||||||||     ||||| | | ||||||||| ||||| ||||| ||||  ||||||||||||| ||||||||||||  |||    
T  7229 tctgaggaggagcatgctgagcattt----tttgtgctacgagtcttgaaggagaatcagttatgtgttaagttgtctaagtttgagttttggttatagg 7324  T
Q  311 aagtgagtttccttggtcatgtgatttctaagggtgg 347  Q
    |||||||||||||||||||||||||||| ||||||||    
T  7325 aagtgagtttccttggtcatgtgatttcgaagggtgg 7361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 25 - 297
Target Start/End: Complemental strand, 375 - 103
Alignment:
Q  25 gtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtct 124  Q
    |||||||||||  ||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  375 gtgaaggcggaatatatatccaaaatcgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtct 276  T
Q  125 ttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagca 224  Q
    | || || || ||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||||||| |||||  || ||||||||||||||    
T  275 tcatagagtatatgaatagaatatttcatccttatctgtactgttttgtggtggtgtttatagatgatattttggggtatttgaaatctgaggaagagca 176  T
Q  225 tgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgag 297  Q
    ||||||||||||||||||| |||||||||||||||| |||||| |||| ||||| ||||||||||||||||||    
T  175 tgctgagcatttgaggattatgttgcaagtcttgaaggagaactagttatgtgctaagttgtctaagtgtgag 103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 11 - 254
Target Start/End: Original strand, 1645 - 1888
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| |||||||| || ||| |||||||||| ||||||||||| ||||||||| ||||||||||||| || |||||||||||||| || ||    
T  1645 atcatcagattagagtgaaggcagaagatgtatccaaaaccgcgttccgaacaaggtatggaaactatgagtattccgtaatgccatttggagtttccaa 1744  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||    
T  1745 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaag 1844  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagt 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  1845 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagt 1888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 118; Significance: 4e-60; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 34 - 335
Target Start/End: Complemental strand, 9154 - 8853
Alignment:
Q  34 gaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaat 133  Q
    |||||||| | ||||||||| || |||||||||||||| |||||||| || | ||||||| ||||||| ||  |||||||||  |||||||| |||||||    
T  9154 gaggatattttcaaaactgcatttcgaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaat 9055  T
Q  134 aaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagca 233  Q
    | ||||||||||| || ||||||||| |||| |  ||| |||||||||| ||||| ||||| ||| ||||||| ||||| ||||| |||||||| |||||    
T  9054 acatgaatagaatcttccatccttatttggatcagtttatggtggtgtttatagacgatatcttgatgtattcgaagtcagaggaggagcatgcagagca 8955  T
Q  234 tttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtg 333  Q
    | | ||||||||||||||    |||||||||||  |||||| ||  |||||||| ||||||||||||| ||||  |||||||||||||||||||||||||    
T  8954 tctaaggattgtgttgcatactttgaaagagaataagttgtttgataagttgtcaaagtgtgagttttagttgcgggaagtgagtttccttggtcatgtg 8855  T
Q  334 at 335  Q
    ||    
T  8854 at 8853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 111; Significance: 6e-56; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 11 - 149
Target Start/End: Complemental strand, 7026 - 6888
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| || |||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7026 atcatcagattagagtaaaggcggaagatatattcaaaacttcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 6927  T
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatt 149  Q
    ||| |||||||||||||||||||| ||||||||||||||    
T  6926 tgcaccaggtgtctttatggaatacatgaatagaatatt 6888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 98; Significance: 3e-48; HSPs: 2)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 234 - 351
Target Start/End: Original strand, 25024 - 25141
Alignment:
Q  234 tttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtg 333  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25024 tttgaggattgtgttgcaagtcttgaaggagaaccagttatgtgcaaagttatctaagtgtgaattttggttgaaggaagtgagtttccttggtcatgtg 25123  T
Q  334 atttctaagggtggtatt 351  Q
    ||||||||||||||||||    
T  25124 atttctaagggtggtatt 25141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 326
Target Start/End: Complemental strand, 19425 - 19319
Alignment:
Q  220 gagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtt 319  Q
    |||||||| |||||| ||| |||||| |||||||| |||||||| ||  |||||| |||||||||||| || ||||| || ||||| |  ||||| ||||    
T  19425 gagcatgcagagcatctgaagattgtattgcaagtgttgaaagataagaagttgtatgccaagttgtcaaaatgtgaattctggttaagtgaagtaagtt 19326  T
Q  320 tccttgg 326  Q
    | |||||    
T  19325 ttcttgg 19319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 94; Significance: 8e-46; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 234 - 351
Target Start/End: Complemental strand, 2323 - 2206
Alignment:
Q  234 tttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtg 333  Q
    |||||||||||||||||||| |||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||     
T  2323 tttgaggattgtgttgcaagccttgaaggagaaccagttatgtgctaagttgtctaagtgtgagttttggttgaaggaagtgagttttcttggtcatgtt 2224  T
Q  334 atttctaagggtggtatt 351  Q
    ||||||||||||||||||    
T  2223 atttctaagggtggtatt 2206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 89; Significance: 8e-43; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 11 - 115
Target Start/End: Complemental strand, 2221 - 2117
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 110  Q
    ||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2221 atcatcagattagagtgaaggcggaagatatatccaaaactgtgttccgaacgaggtatggacactatgagtattatgtgatgccatttggagtatctaa 2122  T
Q  111 tgcgc 115  Q
    |||||    
T  2121 tgcgc 2117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 67 - 339
Target Start/End: Original strand, 9114 - 9386
Alignment:
Q  67 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggacc 166  Q
    |||||||| ||||| ||||| |||||||| || || ||  | |||||||||||||| |||||||| || |||||| | || |||||| | ||| | || |    
T  9114 tatggacattatgaatattcagtgatgcctttcggtgttacaaatgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcgtatttagatc 9213  T
Q  167 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
    |||| ||||| |||||||| |||||||||||| | || || |||||||| ||||| |||| |||||||||||||||||| ||||||||  |||| |||||    
T  9214 gtttcgtggttgtgttcatggatgatattttgatatactctaagtctgaagaagaacatgttgagcatttgaggattgttttgcaagtgctgaaggagaa 9313  T
Q  267 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
      |||| | ||||||| |||| |||||||| || |||||| | || |||||||| ||||| ||||| ||||||    
T  9314 gaagttatatgccaagctgtcaaagtgtgaattctggttggatgaggtgagttttcttggccatgttatttct 9386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1486 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold1486
Description:

Target: scaffold1486; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 255 - 351
Target Start/End: Complemental strand, 212 - 116
Alignment:
Q  255 cttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||| ||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  212 cttgaaggagaatcagttgtgtgctaagttatctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaaaggtggtatt 116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 77; Significance: 1e-35; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 255 - 351
Target Start/End: Original strand, 54210 - 54306
Alignment:
Q  255 cttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    |||||| ||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  54210 cttgaaggagaatcagttgtgtgctaagttatctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaatggtggtatt 54306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 118 - 340
Target Start/End: Original strand, 2636 - 2858
Alignment:
Q  118 ggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagg 217  Q
    ||||| |||||||| || |||||| | || |||||| | | | |||| ||||| ||||| || ||||| |||||||||||| | || || ||||||||||    
T  2636 ggtgtgtttatggagtacatgaatcgcatttttcatgcatttttggatcgtttcgtggttgtattcattgatgatattttgatttactccaagtctgagg 2735  T
Q  218 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgag 317  Q
    |||| |||||||||||||||| || |   |||||||| |||||||||||  |  | | ||| || || || |||||||| || |||||||| ||  ||||    
T  2736 aagaacatgctgagcatttgaagactagtttgcaagtgttgaaagagaagaaactttatgctaaattatcaaagtgtgaattctggttgaaagagatgag 2835  T
Q  318 tttccttggtcatgtgatttcta 340  Q
    ||| ||||| ||||| |||||||    
T  2836 ttttcttggccatgttatttcta 2858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 208 - 339
Target Start/End: Complemental strand, 151195 - 151064
Alignment:
Q  208 aagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttga 307  Q
    |||||||| ||||| |||||||||||||||| | | ||||||||||| |||||||||||  || | | ||| || ||||||||||| || || |||||||    
T  151195 aagtctgaagaagaacatgctgagcatttgaagctggtgttgcaagtgttgaaagagaataagctttatgcgaaattgtctaagtgcgaattctggttga 151096  T
Q  308 aggaagtgagtttccttggtcatgtgatttct 339  Q
    | |||||||| || || || ||||| ||||||    
T  151095 aagaagtgagctttctaggacatgtaatttct 151064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 107 - 339
Target Start/End: Original strand, 121 - 353
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| || ||||| || ||||||||||| |||||| ||||||||||    |||||||| |||| ||| ||||| |||||| | |||||    
T  121 ctaatgcgcctggtgtgttcatggagtatatgaatagaatttttcatgcttatctggataaatttgtggtagtgtacattgatgacattttgatctattc 220  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     |   | |||||||||||||| || ||| |||| |||||||||||||| |||||||||||  |||||| |||||| ||||| ||||||||||| |||||     
T  221 gacaacggaggaagagcatgcagaacatctgagaattgtgttgcaagtattgaaagagaagaagttgtatgccaaattgtcgaagtgtgagttctggtta 320  T
Q  307 aaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  ||||| ||||||||||| ||| | ||||||    
T  321 agtgaagtaagtttccttggccatattatttct 353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 73; Significance: 3e-33; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 107 - 339
Target Start/End: Complemental strand, 114745 - 114513
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| || |||||||| ||||||||||| |||||| |||| |||||    |||||||| || ||||| ||||| |||||| | |||||    
T  114745 ctaatgcgcctggtgtgttcatggaatatatgaatagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattc 114646  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
    ||   |||||||||||||||| || ||| ||| |||||| |||||||| |||||||||||  | |||| |||||| ||||| ||||| ||||| |||||     
T  114645 aagaactgaggaagagcatgcagaacatctgatgattgtattgcaagtattgaaagagaagaaattgtatgccaaattgtcgaagtgcgagttctggtta 114546  T
Q  307 aaggaagtgagtttccttggtcatgtgatttct 339  Q
    || ||||||||||| ||||| ||| | ||||||    
T  114545 aatgaagtgagttttcttggccatattatttct 114513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 339
Target Start/End: Original strand, 108002 - 108163
Alignment:
Q  178 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 277  Q
    |||||||| |||||||||||| | || || |||  ||| || || |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||    
T  108002 gtgttcatcgatgatattttgatttactccaagattgaagaggaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatg 108101  T
Q  278 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |||| |||||||||||||| || |||||||| || || ||||| ||||| ||||| ||||||    
T  108102 ccaaattgtctaagtgtgaattctggttgaaagaggtaagttttcttggccatgttatttct 108163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 256 - 351
Target Start/End: Original strand, 13093 - 13188
Alignment:
Q  256 ttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    ||||| ||||| ||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||    
T  13093 ttgaaggagaatcagttgtgtgctaagttgtctaagtgtgagttttggttgcgggaagtgagtttccttggtcatgtgatttcttagggtggtatt 13188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 76 - 339
Target Start/End: Complemental strand, 5328 - 5066
Alignment:
Q  76 tatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtgg 175  Q
    ||||| ||||| |||||||| || || ||  | |||||||||||||| || ||| | || |||||| | || |||||| | ||| |||| || |||||||    
T  5328 tatgaatattcagtgatgcctttcggtgttacgaatgcgccaggtgtgttcatg-agtacatgaatcgtatttttcatgcgtatttggatcgctttgtgg 5230  T
Q  176 tggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtg 275  Q
    | |||||||| || ||||||||| | || || ||| |||| ||||| |||||||||||||||| |||||| ||||||||  ||||||||||  |||| |     
T  5229 ttgtgttcattgacgatattttgatatactccaagactgaagaagaacatgctgagcatttgaagattgttttgcaagtgctgaaagagaagaagttata 5130  T
Q  276 tgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    ||| |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||| ||||||    
T  5129 tgcaaagttgtcaaagtgtgagttctggttgaatgaggtgagttttcttggccatgttatttct 5066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 72; Significance: 1e-32; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 76 - 339
Target Start/End: Original strand, 27337 - 27599
Alignment:
Q  76 tatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtgg 175  Q
    ||||| |||||||||||||| || || ||  |||||||||| || || ||| ||||||| |||||| | || |||||| ||||||| || |||||||| |    
T  27337 tatgaatattctgtgatgcctttcggtgttactaatgcgccgggagtatttgtggaatatatgaatcgtatttttcatacttatctagatcgttttgttg 27436  T
Q  176 tggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtg 275  Q
    | ||||| |||||||||||  || | || || ||||||||||| || ||||| ||||||||||| ||||| ||||||||  ||||||||||  |||| |     
T  27437 ttgtgtttatagatgatatcctgatatactctaagtctgaggaggaacatgccgagcatttgagaattgttttgcaagtgctgaaagagaagaagttata 27536  T
Q  276 tgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    ||||||||| || ||||| || || |||||||| | ||||||||| ||||||||| | ||||||    
T  27537 tgccaagttatcaaagtgagaattctggttgaacg-agtgagttttcttggtcatattatttct 27599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 145 - 350
Target Start/End: Complemental strand, 76571 - 76366
Alignment:
Q  145 atatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattg 244  Q
    ||||| ||||||||||||||||  ||| |||| ||||| ||||| ||||| ||||||||||||||||| ||||| ||||||| ||||||| | ||  ||     
T  76571 atattccatccttatctggaccagtttttggtagtgtttatagacgatatcttggtgtattcaaagtcagaggaggagcatgttgagcatcttagagtta 76472  T
Q  245 tgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaaggg 344  Q
    |||||||    || ||  ||||  |||||| ||| ||||| || ||||||||||||||| ||  |||||||||||| ||| || |||||||||| | |||    
T  76471 tgttgcacacttttaagaagaagaagttgtttgctaagttttcgaagtgtgagttttggctgcgggaagtgagttttcttagttatgtgatttcgatggg 76372  T
Q  345 tggtat 350  Q
    ||||||    
T  76371 tggtat 76366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 76688 - 76630
Alignment:
Q  28 aaggcggaggatatatccaaaactgcgttccgaacgaggtatggacactatgagtattc 86  Q
    ||||||||| |||||||||||||||| ||||| || || |||||||||| ||| |||||    
T  76688 aaggcggagtatatatccaaaactgcattccggactagatatggacactttgaatattc 76630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 72; Significance: 1e-32; HSPs: 4)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 109 - 340
Target Start/End: Original strand, 24655 - 24886
Alignment:
Q  109 aatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 208  Q
    |||||||||||||| |||||||| || |||||| | || |||||| | | | |||| ||||| ||||| |||||||| |||||||||||| | || || |    
T  24655 aatgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcatttttggaacgtttcgtggttgtgttcatcgatgatattttgatatactcga 24754  T
Q  209 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaa 308  Q
    || |||| ||||| |||||||||||||||| |||||| |||||||| |||||||||||  |||| | ||| || || || |||||||| || ||||||||    
T  24755 agactgaagaagaacatgctgagcatttgaagattgttttgcaagtgttgaaagagaagaagttatatgctaaattatcaaagtgtgaattctggttgaa 24854  T
Q  309 ggaagtgagtttccttggtcatgtgatttcta 340  Q
     || || ||||| ||||| ||||| |||||||    
T  24855 agaggtaagttttcttggccatgttatttcta 24886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 280 - 351
Target Start/End: Complemental strand, 181937 - 181866
Alignment:
Q  280 aagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  181937 aagttgtctaagtgtgaattttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatt 181866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 305
Target Start/End: Complemental strand, 150675 - 150557
Alignment:
Q  187 gatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 286  Q
    ||||| |||||| | ||||| ||| |||| ||||||||||| || ||| ||| |||||| |||||||| |||||||| ||  |||||| |||||||||||    
T  150675 gatgacattttgatttattctaagactgaagaagagcatgcagaacatctgaagattgtattgcaagtattgaaagaaaagaagttgtatgccaagttgt 150576  T
Q  287 ctaagtgtgagttttggtt 305  Q
    | |||||||| || |||||    
T  150575 caaagtgtgaattctggtt 150557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 326
Target Start/End: Original strand, 193953 - 194043
Alignment:
Q  236 tgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttgg 326  Q
    ||||||||||||| ||||| |||||||| ||  ||| || ||| |||||||| ||||||||||| ||||| |  ||||||||||| |||||    
T  193953 tgaggattgtgttacaagttttgaaagaaaagaagtcgtatgctaagttgtcgaagtgtgagttctggttaagtgaagtgagttttcttgg 194043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 82 - 339
Target Start/End: Complemental strand, 3110 - 2853
Alignment:
Q  82 tattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgt 181  Q
    ||||| |||||||| || || ||  ||||||| || ||||| ||||||||||| |||||| | || |||||| ||||| |||| ||||| ||||| ||||    
T  3110 tattcagtgatgcctttcggtgttactaatgcaccgggtgtatttatggaatacatgaatcgtatttttcatgcttatttggatcgtttcgtggttgtgt 3011  T
Q  182 tcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaa 281  Q
    |||| |||||||||||| | || || |||||||| ||||| |||||||| ||||||| |||| | ||||||||  ||||||||||  |||| | |||  |    
T  3010 tcatcgatgatattttgatataatctaagtctgaagaagaacatgctgaacatttgaagattattttgcaagtgctgaaagagaagaagttatatgctca 2911  T
Q  282 gttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
     ||||| |||||||| || |||||||| || |||||||||| ||| ||| | ||||||    
T  2910 attgtcaaagtgtgaattctggttgaatgaggtgagtttccgtggccatattatttct 2853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 187 - 339
Target Start/End: Original strand, 7859 - 8011
Alignment:
Q  187 gatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 286  Q
    |||||||||||| | || || |||||||| ||||| |||| ||||||||||| | | || |||||||| |||||||||||  || | | ||| || ||||    
T  7859 gatgatattttgatttactccaagtctgaagaagaacatgttgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcgaaattgt 7958  T
Q  287 ctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |||||| ||| || |||||||| | |||||| || ||||| ||||| ||||||    
T  7959 ctaagtatgaattctggttgaaaggagtgagctttcttggacatgttatttct 8011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 178 - 339
Target Start/End: Original strand, 115172 - 115333
Alignment:
Q  178 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 277  Q
    |||||||| |||||||||||| | || || |||||||| ||||| |||||||||||||||| |||||| ||||||||  |||| |||||  |||| | ||    
T  115172 gtgttcatcgatgatattttgatatactctaagtctgaagaagaacatgctgagcatttgaagattgttttgcaagtgctgaaggagaagtagttatatg 115271  T
Q  278 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |||||||||| |||||||| ||||||||||| || |||||||| ||||| ||||| ||||||    
T  115272 ccaagttgtcaaagtgtgaattttggttgaaagaggtgagttttcttggccatgttatttct 115333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 69; Significance: 6e-31; HSPs: 6)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 107 - 339
Target Start/End: Original strand, 48634 - 48866
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| || ||||| || ||||| ||||| |||||| |||| |||||    |||||||| || ||||| ||||| |||||| | |||||    
T  48634 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattc 48733  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     |   |||||||||||||||| || ||| |||||||||| |||||||| |||||||||||  |||||| |||||| ||||| ||||| |||||||||||     
T  48734 gagaactgaggaagagcatgcagaacatctgaggattgtattgcaagtattgaaagagaagaagttgtatgccaaattgtcaaagtgcgagttttggtta 48833  T
Q  307 aaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  ||||||||||| ||||| ||| | ||||||    
T  48834 agtgaagtgagttttcttggccatattatttct 48866  T

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Target: scaffold0028; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 181 - 340
Target Start/End: Complemental strand, 17048 - 16889
Alignment:
Q  181 ttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgcca 280  Q
    ||||| |||||||||||| | || || ||| ||||  |||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | |||||    
T  17048 ttcatcgatgatattttgatttactccaagactgaaaaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgcca 16949  T
Q  281 agttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttcta 340  Q
    | ||||||||||||||||| |||||||  ||||||||||||||||| ||||| |||||||    
T  16948 aattgtctaagtgtgagttctggttgagagaagtgagtttccttggccatgttatttcta 16889  T

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Target: scaffold0028; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 181 - 340
Target Start/End: Complemental strand, 10586 - 10427
Alignment:
Q  181 ttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgcca 280  Q
    ||||| |||||||||||| | || || ||| ||||  |||| |||||||||||| | | |||||| |||||||| |||||||||||  |  | | |||||    
T  10586 ttcatcgatgatattttgatttactccaagactgaaaaagaacatgctgagcatctaaagattgtcttgcaagtgttgaaagagaagaaactttatgcca 10487  T
Q  281 agttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttcta 340  Q
    | ||||||||||||||||| |||||||  ||||||||||||||||| ||||| |||||||    
T  10486 aattgtctaagtgtgagttctggttgagagaagtgagtttccttggccatgttatttcta 10427  T

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Target: scaffold0028; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 338
Target Start/End: Complemental strand, 45266 - 45106
Alignment:
Q  178 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 277  Q
    |||||||| |||||||||||| | || || ||| |||| ||||| |||||||| ||| ||| |||||| |||||||| |||||||||||  |  | | ||    
T  45266 gtgttcatcgatgatattttgatttactccaagactgaagaagaacatgctgatcatctgaagattgtcttgcaagtattgaaagagaaaaaactttatg 45167  T
Q  278 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 338  Q
    |||| |||||||||||||| || |||||||| || |||||||| ||||| ||||| |||||    
T  45166 ccaaattgtctaagtgtgaattctggttgaaagaggtgagttttcttggccatgttatttc 45106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 306 - 351
Target Start/End: Original strand, 104892 - 104937
Alignment:
Q  306 gaaggaagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  104892 gaaggaagtgagtttccttggtcatgtgatttctaagggtggtatt 104937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 310
Target Start/End: Original strand, 94054 - 94093
Alignment:
Q  271 ttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  94054 ttgtgtgctaagttgtctaagtgtgagttttggttgaagg 94093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 124 - 330
Target Start/End: Original strand, 84656 - 84862
Alignment:
Q  124 tttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagc 223  Q
    ||||||||||| |||||| | || |||||| ||||||| || |||||||| || ||||| |||||||||||| || | || || ||| |  |||| ||||    
T  84656 tttatggaatatatgaatcgtatttttcatacttatctagatcgttttgttgttgtgtttatagatgatattatgatatactctaagaccaaggaggagc 84755  T
Q  224 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttcct 323  Q
    |||| ||||||||||| ||||| ||||||||  ||||||||||  |||| | ||||||||| || ||||| || || ||||||||  |||||||||||||    
T  84756 atgccgagcatttgagaattgttttgcaagtgctgaaagagaagaagttatatgccaagttatcaaagtgcgaattctggttgaacaaagtgagtttcct 84855  T
Q  324 tggtcat 330  Q
    |||||||    
T  84856 tggtcat 84862  T

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Target: scaffold0007; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 172 - 339
Target Start/End: Complemental strand, 268729 - 268562
Alignment:
Q  172 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 271  Q
    ||||||||||| ||||||||||||||| | ||||| ||  |||| || || || || || ||  ||| ||||||||||||  | ||||||||||   |||    
T  268729 gtggtggtgtttatagatgatattttgatttattctaaaactgaagaggaacacgccgaacacctgaagattgtgttgcagattttgaaagagagaaagt 268630  T
Q  272 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    ||| |||||||||||| ||||| ||||| ||||| |  |||||||||||||| || ||||| ||||||    
T  268629 tgtatgccaagttgtcgaagtgcgagttctggttaagtgaagtgagtttcctaggccatgttatttct 268562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 107 - 339
Target Start/End: Original strand, 1969 - 2201
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || |||||| | || |||||| | ||| | || || ||  |||| |||||||| |||||||||||| | || ||    
T  1969 ctaatgcgccgggtgtgtttatggagtacatgaatcgtatttttcatgcgtatttagatcgcttcatggttgtgttcattgatgatattttgatatactc 2068  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     |||||| | ||||| |||| ||||||||||| |||||| ||||||||  |||| |||||  ||||   |||||||||||| |||||||| || ||||||    
T  2069 taagtctcaagaagaacatgttgagcatttgaagattgttttgcaagtgctgaaggagaagaagttaaatgccaagttgtcaaagtgtgaattctggttg 2168  T
Q  307 aaggaagtgagtttccttggtcatgtgatttct 339  Q
    || || |||||||| ||||||||||| ||||||    
T  2169 aatgaggtgagttttcttggtcatgttatttct 2201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 118 - 338
Target Start/End: Complemental strand, 14643 - 14423
Alignment:
Q  118 ggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagg 217  Q
    ||||| ||||||||||| |||||| |||| |||||| | | | |||| ||||| ||||| |||||||| || ||||||||| | || || ||||| || |    
T  14643 ggtgtgtttatggaatacatgaatcgaatttttcatgcgtttttggatcgtttcgtggttgtgttcatcgacgatattttgatatactcgaagtccgaag 14544  T
Q  218 aagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgag 317  Q
    ||||||||||||||||||||| |||||| ||||||||  ||||||||||  || | | | | || ||||| ||||||||||| |||||||| || || ||    
T  14543 aagagcatgctgagcatttgaagattgttttgcaagtgctgaaagagaagaagctatattctaaattgtcaaagtgtgagttctggttgaatgaggttag 14444  T
Q  318 tttccttggtcatgtgatttc 338  Q
    ||| ||||| ||||| |||||    
T  14443 ttttcttggccatgttatttc 14423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 112 - 339
Target Start/End: Original strand, 6014 - 6241
Alignment:
Q  112 gcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagt 211  Q
    ||||||||||| |||||||| || |||||| | || || ||| | ||||| || ||||| ||||| |||||||| || ||||||||| | || || |||     
T  6014 gcgccaggtgtgtttatggagtacatgaatcgtattttccatgcatatctagatcgtttcgtggttgtgttcatcgacgatattttgatatactctaagg 6113  T
Q  212 ctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagga 311  Q
    |||| ||||| ||||||||||| |||| |||||| ||||||||  ||||||||||  |||| | ||| |||||||| |||||||| || |||||||| ||    
T  6114 ctgaagaagaacatgctgagcaattgaagattgttttgcaagtgctgaaagagaagaagttatatgctaagttgtcaaagtgtgaattctggttgaatga 6213  T
Q  312 agtgagtttccttggtcatgtgatttct 339  Q
     || | ||| ||||||||||| ||||||    
T  6214 ggtcatttttcttggtcatgttatttct 6241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 256 - 351
Target Start/End: Original strand, 10979 - 11074
Alignment:
Q  256 ttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatt 351  Q
    ||||| || |||||||| ||||| |||||||||||||| || ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  10979 ttgaaggaaaaccagttatgtgctaagttgtctaagtgcgaattttggttgaagggagtgattttccttggtcatgtgatttctaagggtggtatt 11074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 64; Significance: 6e-28; HSPs: 3)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 172 - 339
Target Start/End: Original strand, 11424 - 11591
Alignment:
Q  172 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 271  Q
    ||||||||||| || |||||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  | |    
T  11424 gtggtggtgtttatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaat 11523  T
Q  272 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    | | ||| || |||||||||||||| || |||||||||||||| ||||| ||||| ||||| ||||||    
T  11524 tttatgctaaattgtctaagtgtgaattctggttgaaggaagtaagttttcttggccatgttatttct 11591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 339
Target Start/End: Complemental strand, 50196 - 50044
Alignment:
Q  187 gatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 286  Q
    |||||||||||| | || || |||||||| ||||| |||| ||||||||||| | | || |||||||| |||||||||||  || | | ||| || ||||    
T  50196 gatgatattttgatttactccaagtctgaagaagaacatgttgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcgaaattgt 50097  T
Q  287 ctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    ||||||| || ||||||||||| |||||| | || ||||| ||||| ||||||    
T  50096 ctaagtgcgaattttggttgaaagaagtgggctttcttggacatgttatttct 50044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 266
Target Start/End: Complemental strand, 53741 - 53662
Alignment:
Q  187 gatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
    |||||||||||| | || || |||||||| ||||| |||||||||||||||| | | || |||||||| |||||||||||    
T  53741 gatgatattttgatttactccaagtctgaagaagaacatgctgagcatttgaagctggttttgcaagtgttgaaagagaa 53662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 64; Significance: 6e-28; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 109 - 332
Target Start/End: Complemental strand, 495202 - 494979
Alignment:
Q  109 aatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 208  Q
    |||||||||||||| ||||| || || |||||| | || |||||| | | | |||| ||||||||||| |||||||| || ||||||||| | || || |    
T  495202 aatgcgccaggtgtgtttattgagtacatgaatcgtatttttcatgcgtttttggatcgttttgtggttgtgttcatcgacgatattttgatatactcga 495103  T
Q  209 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaa 308  Q
    ||||||| ||||| ||||||||| |||||| |||||| ||||||||  ||||||||||  || | | ||| || ||||| |||| |||||| ||||||||    
T  495102 agtctgaagaagaacatgctgagtatttgaagattgttttgcaagtgctgaaagagaagaagctatatgctaaattgtcaaagtctgagttctggttgaa 495003  T
Q  309 ggaagtgagtttccttggtcatgt 332  Q
     || |||||||| ||||| |||||    
T  495002 tgaggtgagttttcttggccatgt 494979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 67 - 305
Target Start/End: Original strand, 453293 - 453531
Alignment:
Q  67 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggacc 166  Q
    |||||||||||||| |||   |||||||| || || ||  |||||||||| ||||| ||||||||||| |||||  |||| || ||| | ||||||||      
T  453293 tatggacactatgaatataaagtgatgcctttcggtgttactaatgcgcctggtgtgtttatggaatatatgaaccgaattttccatgcctatctggata 453392  T
Q  167 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
      |||||||| ||||| || ||||| || ||| | ||||  ||| |||| ||||||||||| || ||| ||| |||||| || ||||| |||||||||||    
T  453393 aatttgtggttgtgtttattgatgacatcttgatttatttgaagactgaagaagagcatgcagaacatctgaagattgtattacaagtattgaaagagaa 453492  T
Q  267 ccagttgtgtgccaagttgtctaagtgtgagttttggtt 305  Q
      |||||| || ||||||||| || |||||||| |||||    
T  453493 gaagttgtatgtcaagttgtcaaaatgtgagttctggtt 453531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 329
Target Start/End: Original strand, 515595 - 515695
Alignment:
Q  229 gagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtc 328  Q
    |||||| |||| ||||| |||||||| |||||||||||   ||||| ||| |||||||| || |||||||| ||||| |  ||||||||||| || ||||    
T  515595 gagcatctgagaattgtcttgcaagtgttgaaagagaagaggttgtatgcaaagttgtcaaaatgtgagttctggttaagtgaagtgagttttctgggtc 515694  T
Q  329 a 329  Q
    |    
T  515695 a 515695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 107 - 305
Target Start/End: Original strand, 5209 - 5407
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || ||||||||||| || ||| ||||||||||    |||||||| ||||| || ||||||||  |  | |||||    
T  5209 ctaatgcgcctggtgtgtttatggagtacatgaatagaattttccatgcttatctggataaatttgtggttgtgtttattgatgatatcctaatttattc 5308  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggtt 305  Q
     |||  ||| ||||||||||| |||||| ||| ||||||||||||||| |||||||| ||  |||||| |||||||||||| || ||||| ||||||||    
T  5309 taagaatgaagaagagcatgcagagcatctgaagattgtgttgcaagtgttgaaagaaaagaagttgtatgccaagttgtccaaatgtgaattttggtt 5407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 63; Significance: 2e-27; HSPs: 3)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 256 - 350
Target Start/End: Original strand, 46682 - 46776
Alignment:
Q  256 ttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtat 350  Q
    ||||| ||||| || |||||||| ||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||| |||||||    
T  46682 ttgaaggagaatcaattgtgtgctaagttgtctaagtgtgaattttggttgcgggaagtgagtttccttggtcatgtgatttctaagagtggtat 46776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 305
Target Start/End: Complemental strand, 41922 - 41685
Alignment:
Q  67 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggacc 166  Q
    ||||| |||||||| |||   |||||||| || |||||  |||||||||| ||||| |||||||| || ||||| ||||| || ||| ||||| ||||      
T  41922 tatggtcactatgaatataaggtgatgcctttcggagttactaatgcgcctggtgtgtttatggagtatatgaacagaattttgcatgcttatatggata 41823  T
Q  167 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
      |||||||| ||||| || ||||| || ||  | ||||| |||  ||| ||||||||||| |||||| ||| ||||||||||||||| ||| |||| ||    
T  41822 aatttgtggttgtgtttattgatgacatcttaatttattctaagaatgaagaagagcatgcagagcatctgaagattgtgttgcaagtgttg-aagaaaa 41724  T
Q  267 ccagttgtgtgccaagttgtctaagtgtgagttttggtt 305  Q
      |||||| || |||| |||| |||||||| || |||||    
T  41723 gaagttgtatgacaagctgtccaagtgtgaattctggtt 41685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 266
Target Start/End: Original strand, 51527 - 51624
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
    |||||||| || ||||| ||||| |||||| | || || ||| |||| |||||  ||||||||||| ||| |||||| |||||||| |||||||||||    
T  51527 tttgtggttgttttcatcgatgacattttgatttactccaagactgaagaagaagatgctgagcatctgaagattgtcttgcaagtgttgaaagagaa 51624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1602 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold1602
Description:

Target: scaffold1602; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 67 - 339
Target Start/End: Original strand, 147 - 419
Alignment:
Q  67 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggacc 166  Q
    |||||||| |||||||||   |||||||| || || ||  | ||||| || ||||| || ||||| || |||||| | || |||||| | | | |||| |    
T  147 tatggacattatgagtataacgtgatgccgttcggtgttacaaatgcacctggtgtgttgatggagtacatgaatcgcatttttcatgcatttttggatc 246  T
Q  167 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
    |||| ||||| || ||||| ||||| |||||| | || || ||| |||||||||| |||||||||||||||| || |||||||||||| |||||||||||    
T  247 gtttcgtggttgttttcattgatgacattttgatttactccaagactgaggaagaacatgctgagcatttgaagactgtgttgcaagtgttgaaagagaa 346  T
Q  267 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
      || | | ||| || ||||| |||||||| || |||||||| || |||||||| ||||| ||||| ||||||    
T  347 gaagctttatgctaaattgtcaaagtgtgaattctggttgaatgaggtgagttttcttggccatgttatttct 419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 61; Significance: 4e-26; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 67 - 339
Target Start/End: Original strand, 10821 - 11093
Alignment:
Q  67 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggacc 166  Q
    |||||||| || || ||||| |||||||| || || ||  | |||||||||||||| |||||||| ||  ||||| | || |||||| | ||| | || |    
T  10821 tatggacattacgaatattcagtgatgcctttcggtgttacaaatgcgccaggtgtgtttatggagtacttgaatcgtatttttcatgcgtatttagatc 10920  T
Q  167 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
    | ||  |||| |||||||| |||||||||||| | || || ||| |||| ||||| ||||||||||||||||||||||| ||||||||  |||| |||||    
T  10921 gcttcatggttgtgttcattgatgatattttgatatactctaagactgaagaagaacatgctgagcatttgaggattgtcttgcaagtgctgaaggagaa 11020  T
Q  267 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
      || | | ||| |||||||| ||||||||  | |||||||| ||||| ||||| ||||| ||||| ||||||    
T  11021 gaagctttatgctaagttgtcaaagtgtgaactctggttgaatgaagtaagttttcttggccatgttatttct 11093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 67 - 339
Target Start/End: Original strand, 17013 - 17285
Alignment:
Q  67 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggacc 166  Q
    |||||||| || || ||||| |||||||| || || ||  | |||||||||||||| |||||||| ||  ||||| | || |||||| | ||| | || |    
T  17013 tatggacattacgaatattcagtgatgcctttcggtgttacaaatgcgccaggtgtgtttatggagtacttgaatcgtatttttcatgcgtatttagatc 17112  T
Q  167 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
    | ||  |||| |||||||| |||||||||||| | || || ||| |||| ||||| ||||||||||||||||||||||| ||||||||  |||| |||||    
T  17113 gcttcatggttgtgttcattgatgatattttgatatactctaagactgaagaagaacatgctgagcatttgaggattgtcttgcaagtgctgaaggagaa 17212  T
Q  267 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
      || | | ||| |||||||| ||||||||  | |||||||| ||||| ||||| ||||| ||||| ||||||    
T  17213 gaagctttatgctaagttgtcaaagtgtgaactctggttgaatgaagtaagttttcttggccatgttatttct 17285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 107 - 326
Target Start/End: Complemental strand, 2902 - 2683
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || |||||  |||| || ||| |||| |||||    || ||||| ||||| || ||||| || ||| | |||||    
T  2902 ctaatgcgcctggtgtgtttatggagtatatgaaccgaattttccatgcttacctggataaattcgtggttgtgtttattgatgacatcttgatttattc 2803  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
    |||| |||| ||||||||||| || ||| ||| |||||| |||||||| |||||||||||  |||||| ||||||||||||||| |||||||| |||||     
T  2802 aaagactgaagaagagcatgcagaacatctgaagattgtattgcaagtgttgaaagagaagaagttgtatgccaagttgtctaaatgtgagttctggtta 2703  T
Q  307 aaggaagtgagtttccttgg 326  Q
    |  ||||| ||||| |||||    
T  2702 agtgaagtaagttttcttgg 2683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 217 - 308
Target Start/End: Complemental strand, 35572 - 35481
Alignment:
Q  217 gaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaa 308  Q
    ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||| || || |||||||||||||| ||||||||    
T  35572 gaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattatctaagtgtgagttctggttgaa 35481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 181 - 339
Target Start/End: Complemental strand, 9478 - 9320
Alignment:
Q  181 ttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgcca 280  Q
    ||||| |||||||||||  | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | |||||    
T  9478 ttcatcgatgatatttttatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgcca 9379  T
Q  281 agttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    | ||||||||||||||||| |||||||| ||||||||||| ||||| ||||| ||||||    
T  9378 aattgtctaagtgtgagttctggttgaaagaagtgagttttcttggccatgttatttct 9320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 124 - 326
Target Start/End: Original strand, 5487 - 5689
Alignment:
Q  124 tttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagc 223  Q
    |||||||| || |||||  |||| || ||| ||||||||||    |||||||| ||||| || ||||| || ||| | ||||||||| |||| |||||||    
T  5487 tttatggagtatatgaaccgaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttgatttattcaaagactgaagaagagc 5586  T
Q  224 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttcct 323  Q
    |||| || ||| ||| ||||||||||||||| |||||||||||  |||||| |||||||||||| || |||||||| ||||| |  ||||| ||||| ||    
T  5587 atgcagaacatctgaagattgtgttgcaagtgttgaaagagaagaagttgtatgccaagttgtcaaaatgtgagttctggttaagtgaagtaagttttct 5686  T
Q  324 tgg 326  Q
    |||    
T  5687 tgg 5689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 124 - 326
Target Start/End: Original strand, 9918 - 10120
Alignment:
Q  124 tttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagc 223  Q
    |||||||| || |||||  |||| || ||| ||||||||||    |||||||| ||||| || ||||| || ||| | ||||||||| |||| |||||||    
T  9918 tttatggagtatatgaaccgaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttgatttattcaaagactgaagaagagc 10017  T
Q  224 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttcct 323  Q
    |||| || ||| ||| ||||||||||||||| |||||||||||  |||||| |||||||||||| || |||||||| ||||| |  ||||| ||||| ||    
T  10018 atgcagaacatctgaagattgtgttgcaagtgttgaaagagaagaagttgtatgccaagttgtcaaaatgtgagttctggttaagtgaagtaagttttct 10117  T
Q  324 tgg 326  Q
    |||    
T  10118 tgg 10120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 107 - 305
Target Start/End: Original strand, 176464 - 176662
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || ||||||||||| || ||| ||||| |||| || ||||| || || || || ||||| || ||| | |||||    
T  176464 ctaatgcgcctggtgtgtttatggagtacatgaatagaattttccatgcttatttggatcggtttgttgttgtatttattgatgacatcttgatttattc 176563  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggtt 305  Q
     |||||||| ||||||||||| |||||||| | |||||||||| |||| ||||| || ||  |||||| |||||||||||| || ||||| || |||||    
T  176564 taagtctgaagaagagcatgcagagcatttaaagattgtgttgtaagtgttgaatgaaaagaagttgtatgccaagttgtccaaatgtgaattctggtt 176662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 59; Significance: 6e-25; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 113 - 339
Target Start/End: Complemental strand, 4094 - 3868
Alignment:
Q  113 cgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtc 212  Q
    |||||||||| |||||||| || |||||| | || |||||| | | | |||| ||||| ||||| |||||||| || ||||||||| | || || ||| |    
T  4094 cgccaggtgtgtttatggagtacatgaatcgtatttttcatgcatttttggatcgtttcgtggttgtgttcatcgacgatattttgatatactccaagac 3995  T
Q  213 tgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaa 312  Q
    ||| ||||| |||||||||||||||| |||||| ||||||||  ||||||||||  || | | ||| || ||||| |||||||| || |||||||| ||     
T  3994 tgaagaagaacatgctgagcatttgaagattgtattgcaagtgctgaaagagaagaagctatatgctaaattgtcaaagtgtgaattctggttgaaagag 3895  T
Q  313 gtgagtttccttggtcatgtgatttct 339  Q
    |||||||| |||||  |||| ||||||    
T  3894 gtgagttttcttggcaatgttatttct 3868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 329
Target Start/End: Original strand, 40453 - 40675
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || |||||  |||| || ||| ||| ||||||    ||||| |||||||| || |||||||||||  | |||||    
T  40453 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 40552  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     |||  |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||   ||||| ||| ||||| || || |||||||| |||||     
T  40553 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaaggaaaagaggttgtatgctaagttatcaaaatgtgagttctggtta 40652  T
Q  307 aaggaagtgagtttccttggtca 329  Q
    || ||||| ||||| || |||||    
T  40653 aatgaagtaagttttctgggtca 40675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 326
Target Start/End: Original strand, 45630 - 45738
Alignment:
Q  217 gaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtga 316  Q
    |||||||||||  | ||| ||| ||||||||| ||||| |||||||||||  |||||| ||| || ||||| ||||||||||| ||||| |  ||||| |    
T  45630 gaagagcatgcaaaacatctgaagattgtgttacaagttttgaaagagaagaagttgtatgctaa-ttgtcgaagtgtgagttctggttaagtgaagtaa 45728  T
Q  317 gtttccttgg 326  Q
    |||| |||||    
T  45729 gttttcttgg 45738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 109 - 294
Target Start/End: Complemental strand, 17061 - 16876
Alignment:
Q  109 aatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 208  Q
    |||||||||||||| |||||||| || |||||| | || |||||| | ||| | || || || ||||| |||||||| || ||||||||| | || || |    
T  17061 aatgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcgtatttagatcgcttcgtggttgtgttcatcgacgatattttgatatactcca 16962  T
Q  209 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgt 294  Q
    || |||| ||||| |||||||||||||||| |||||| |||||||| |||||||||||  |||| | |||||| ||||| ||||||    
T  16961 agactgaagaagaacatgctgagcatttgaagattgttttgcaagtgttgaaagagaagaagttatatgccaaattgtcaaagtgt 16876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 67 - 339
Target Start/End: Complemental strand, 103459 - 103187
Alignment:
Q  67 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggacc 166  Q
    ||||||||||||||||||   |||||||| || || ||  | |||||||||||||| |||||||| |  |||||| | || |||||| | | | |||| |    
T  103459 tatggacactatgagtataaagtgatgcctttcggtgttgcaaatgcgccaggtgtgtttatggagtgcatgaatcgcatttttcatgcatttttggatc 103360  T
Q  167 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
    |||| ||||| || ||||| |||||||||||| | || || |||||||||||||| ||||| || ||||||| || ||| ||||||||  ||||||||||    
T  103359 gtttcgtggtagtattcatcgatgatattttgatttactccaagtctgaggaagaacatgccgaacatttgaagactgttttgcaagtgctgaaagagaa 103260  T
Q  267 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
      || | | ||| || || || |||||||| || || ||||| || |||||||| ||||| ||||| ||||||    
T  103259 gaagctttatgctaaattatcaaagtgtgaattctgattgaaagaggtgagttttcttggccatgttatttct 103187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1830 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold1830
Description:

Target: scaffold1830; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 108 - 339
Target Start/End: Complemental strand, 1179 - 948
Alignment:
Q  108 taatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattca 207  Q
    ||||| ||| ||||| |||||||| || ||||| ||||| || ||| ||||||||||    |||||||| ||||| || ||||| || ||| | ||||||    
T  1179 taatgtgcctggtgtgtttatggagtatatgaacagaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttgatttattca 1080  T
Q  208 aagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttga 307  Q
    ||| |||| ||||||||||| || ||| |||  ||||| |||||||| |||||||| ||  |||||| |||||||||||| || |||||||| | ||| |    
T  1079 aagactgaagaagagcatgcagaacatctgaatattgtattgcaagtattgaaagaaaagaagttgtatgccaagttgtcaaaatgtgagttctagttaa 980  T
Q  308 aggaagtgagtttccttggtcatgtgatttct 339  Q
    | ||||| ||||| ||||| ||| | ||||||    
T  979 atgaagtaagttttcttggccatattatttct 948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 124 - 339
Target Start/End: Original strand, 38085 - 38300
Alignment:
Q  124 tttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagc 223  Q
    |||||||| || |||||| | || |||||| | | | |||| ||||| ||||| || ||||| |||||||||||| | || |  |||||||| ||||| |    
T  38085 tttatggagtacatgaatcgcatctttcatgcatttttggatcgtttcgtggttgttttcattgatgatattttgatttactacaagtctgaagaagaac 38184  T
Q  224 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttcct 323  Q
    ||||||||||||||| | | || |||||||| |||||||||||  || | | ||| || |||||||||||||| || |||||||| |||||||| || ||    
T  38185 atgctgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagctttct 38284  T
Q  324 tggtcatgtgatttct 339  Q
    ||| ||||| ||||||    
T  38285 tggacatgttatttct 38300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2004 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold2004
Description:

Target: scaffold2004; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 169 - 339
Target Start/End: Original strand, 991 - 1161
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| || |||||||||| ||||||| | || || |||||||| ||||| |||||||||||||||| | | || |||||||| |||||||||||      
T  991 tttgtggttgttttcatagatggtattttgatttactccaagtctgaagaagaacatgctgagcatttgaagctggttttgcaagtgttgaaagagaaga 1090  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    || | | ||| || || ||||||||||| || |||||||| || |||||||| ||||| ||||| ||||||    
T  1091 agctttatgctaaattatctaagtgtgaattctggttgaaagaggtgagttttcttggacatgttatttct 1161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 109 - 339
Target Start/End: Complemental strand, 11012 - 10782
Alignment:
Q  109 aatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 208  Q
    |||||||| ||||| |||||||| || ||||||||||| || ||| ||||| |||| |  ||||| || ||||| || ||||| || ||| | ||||| |    
T  11012 aatgcgcctggtgtgtttatggagtacatgaatagaattttccatgcttatttggatcaatttgtagttgtgtttattgatgacatcttgatttattcta 10913  T
Q  209 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaa 308  Q
    || |||| ||||||||| | |||||||| | |||||| |||||||| |||||||| ||  |||||| |||||||||||| || ||||| || ||||| |     
T  10912 agactgaagaagagcatacagagcatttaaagattgtattgcaagtgttgaaagaaaagaagttgtatgccaagttgtccaaatgtgaattctggttaag 10813  T
Q  309 ggaagtgagtttccttggtcatgtgatttct 339  Q
     ||||| ||||| ||||| ||| | ||||||    
T  10812 tgaagtaagttttcttggccatatcatttct 10782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 169 - 339
Target Start/End: Complemental strand, 9062 - 8892
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || |||||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||      
T  9062 tttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 8963  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  8962 aactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 8892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 109 - 339
Target Start/End: Original strand, 15343 - 15573
Alignment:
Q  109 aatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 208  Q
    |||||||||||| |||||||||| || |||||| | || |||||| | | | |||| ||||| ||| | |||||||| || ||||||||| | || || |    
T  15343 aatgcgccaggtatctttatggagtacatgaatcgtatttttcatgcatttttggatcgtttcgtgattgtgttcatcgacgatattttgatatactcca 15442  T
Q  209 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaa 308  Q
    || |||| ||||| || ||||||||||||| |||||| ||||||||  | ||||||||  |||| | ||| || ||||| |||||||| || | ||||||    
T  15443 agactgaagaagaacaagctgagcatttgaagattgttttgcaagtgctaaaagagaaaaagttatatgctaaattgtcaaagtgtgaattctagttgaa 15542  T
Q  309 ggaagtgagtttccttggtcatgtgatttct 339  Q
     || |||||||| ||||| ||||| ||||||    
T  15543 agaggtgagttttcttggccatgtaatttct 15573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 109 - 339
Target Start/End: Original strand, 14601 - 14831
Alignment:
Q  109 aatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 208  Q
    |||||||||||||| |||||||| || |||||| | || |||||| | | | ||||  |||| ||||| |||||||| || ||||||||| | || || |    
T  14601 aatgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcatttttggatagtttcgtggttgtgttcatcgacgatattttgatatactcca 14700  T
Q  209 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaa 308  Q
    ||  ||| ||||| |||| ||||||||||| |||||| ||||||||  ||||||||||  |||| | ||| || ||||| |||||||| || | ||||||    
T  14701 agattgaagaagaacatgttgagcatttgaagattgttttgcaagtgctgaaagagaagaagttatatgctaaattgtcaaagtgtgaattctagttgaa 14800  T
Q  309 ggaagtgagtttccttggtcatgtgatttct 339  Q
     || |||||||| ||||| ||||| ||||||    
T  14801 agaggtgagttttcttggccatgttatttct 14831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 107 - 329
Target Start/End: Original strand, 31439 - 31661
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| || || ||||||||||| |||||  |||| || ||| ||| |||||     |||||||||||||| || ||||||||| || | |||||    
T  31439 ctaatgcgcctggggtatttatggaatatatgaaccgaattttccatgcttttctggttaaatttgtggtggtgtttattgatgatattctgatttattc 31538  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     ||| |||| || |||||||| |||||| ||| |||| | ||||||||||||||||| ||  |||||| ||| ||| |||| ||||||||||| |||||     
T  31539 taagactgaagaggagcatgcagagcatctgaagattatattgcaagtcttgaaagaaaagaagttgtatgcaaagctgtcaaagtgtgagttctggtta 31638  T
Q  307 aaggaagtgagtttccttggtca 329  Q
    |  ||||||||||| || |||||    
T  31639 agtgaagtgagttttctgggtca 31661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 109 - 339
Target Start/End: Original strand, 7209 - 7439
Alignment:
Q  109 aatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 208  Q
    ||||| || ||||| |||||||| || |||||| |||| |||||| | | | |||| |||||  |||| || ||||| ||||| |||||||| || || |    
T  7209 aatgcacctggtgtgtttatggagtacatgaatcgaatctttcatgcatttttggatcgtttcatggttgtattcatcgatgacattttggtttactcca 7308  T
Q  209 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaa 308  Q
    || |||| ||||| |||||||||||||||| || ||| |||||||| |||||||||||  |  | | ||| || ||||| |||||||| || ||||||||    
T  7309 agactgaagaagaacatgctgagcatttgaagactgttttgcaagtgttgaaagagaagaaactttatgctaaattgtcaaagtgtgaattctggttgaa 7408  T
Q  309 ggaagtgagtttccttggtcatgtgatttct 339  Q
     || |||||||| ||||| ||||| ||||||    
T  7409 tgaggtgagttttcttggccatgttatttct 7439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 107 - 305
Target Start/End: Complemental strand, 49290 - 49092
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || ||||| | ||| || ||| ||||||||||    |||||||| ||||| || ||||| || ||| | |||||    
T  49290 ctaatgcgcctggtgtgtttatggagtatatgaacaaaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttgatttattc 49191  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggtt 305  Q
     ||| |||| ||||||||||| || ||| ||| |||||| |||||||| |||||||| ||  |||||| |||||||||||| || |||||||| |||||    
T  49190 taagactgaagaagagcatgcagaacatctgaagattgtattgcaagtgttgaaagaaaagaagttgtatgccaagttgtcaaaatgtgagttctggtt 49092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 112 - 326
Target Start/End: Original strand, 64633 - 64847
Alignment:
Q  112 gcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagt 211  Q
    ||||| ||||| |||||||| || |||||  |||| || ||| ||||||||||    |||||||| ||||| || ||||| || ||  | |||||||||     
T  64633 gcgcctggtgtgtttatggagtatatgaaccgaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttaatttattcaaaga 64732  T
Q  212 ctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagga 311  Q
    |||| ||||||||||| |||||| ||| ||||||||||||||| |||||| ||||  |||||| |||||||||||| || ||||| || ||||| |  ||    
T  64733 ctgaagaagagcatgcagagcatctgaagattgtgttgcaagtgttgaaaaagaagaagttgtatgccaagttgtcaaaatgtgaattctggttaagtga 64832  T
Q  312 agtgagtttccttgg 326  Q
    ||| ||||| |||||    
T  64833 agtaagttttcttgg 64847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 111 - 337
Target Start/End: Complemental strand, 22887 - 22661
Alignment:
Q  111 tgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 210  Q
    |||||||||||| |||||||| || |||||| | || |||||| | ||| |||| |  || ||||| ||||||||  ||||||||||| | || || |||    
T  22887 tgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcgtatttggatcacttcgtggttgtgttcatcaatgatattttgatatactctaag 22788  T
Q  211 tctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 310  Q
    ||||| ||||| ||  |||||||||||| |||||| ||||||||   ||| || ||  |||| | |||||||||||| ||||||||||| |||||||| |    
T  22787 tctgaagaagaacacactgagcatttgaagattgttttgcaagtgccgaaggaaaagaagttatatgccaagttgtcaaagtgtgagttctggttgaatg 22688  T
Q  311 aagtgagtttccttggtcatgtgattt 337  Q
    | || ||||| ||||| ||||| ||||    
T  22687 aggtaagttttcttggccatgttattt 22661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 181 - 339
Target Start/End: Original strand, 38014 - 38172
Alignment:
Q  181 ttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgcca 280  Q
    ||||| |||||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||| |    
T  38014 ttcatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgcta 38113  T
Q  281 agttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    | || |||||||||||||| |||||||| || || ||||| ||||| ||||| ||||||    
T  38114 aattatctaagtgtgagttctggttgaaagaggtaagttttcttggccatgttatttct 38172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 169 - 326
Target Start/End: Complemental strand, 6874 - 6717
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || ||||| || ||| | ||||| ||| |||||||||||||||  || ||| ||| |||||| |||||||| |||||||||||      
T  6874 tttgtggttgtgtttattgatgacatcttgatttattctaagactgaggaagagcatgtagaacatctgaagattgtattgcaagtattgaaagagaaga 6775  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttgg 326  Q
    |||||| |||||||||||| || |||||||| ||||| |  ||||||||||| |||||    
T  6774 agttgtatgccaagttgtcaaaatgtgagttctggttaagtgaagtgagttttcttgg 6717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 107 - 307
Target Start/End: Complemental strand, 11979 - 11779
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || ||||| ||||| |||||| | ||||||||    |||||||| ||||| || ||||||||  |  | |||||    
T  11979 ctaatgcgcctggtgtgtttatggagtatatgaacagaatttttcatgcctatctggataaatttgtggttgtgtttattgatgatatcctaatttattc 11880  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     |||  ||| ||||||||||| |||||| ||| |||||| |||||||| |||||||| ||  |||||| |||||||||||| || ||||| || ||||||    
T  11879 taagaatgaagaagagcatgcagagcatctgaagattgtattgcaagtgttgaaagaaaagaagttgtatgccaagttgtccaaatgtgaattctggttg 11780  T
Q  307 a 307  Q
    |    
T  11779 a 11779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 172 - 339
Target Start/End: Complemental strand, 16762 - 16595
Alignment:
Q  172 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 271  Q
    |||||||| || || |||||||||||| | || || |||||||| ||||| |||||||||||||||| | | || ||| |||| |||||||||||  ||     
T  16762 gtggtggtttttatcgatgatattttgatttactccaagtctgaagaagaacatgctgagcatttgaagctggttttgtaagtgttgaaagagaagaagc 16663  T
Q  272 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    | | ||| || |||||||| || || || |||||||| |||||||| || ||||| ||||| ||||||    
T  16662 tttatgcgaaattgtctaattgcgaattctggttgaaagaagtgagctttcttggacatgttatttct 16595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 172 - 320
Target Start/End: Complemental strand, 25234 - 25086
Alignment:
Q  172 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 271  Q
    |||||||| || ||||||||||||||| | ||||| ||| |||| || |||||||| ||||| |||| ||||||||||||  | ||||||||||   |||    
T  25234 gtggtggtatttatagatgatattttgatttattctaagactgaagaggagcatgcagagcacttgaagattgtgttgcagattttgaaagagagaaagt 25135  T
Q  272 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagttt 320  Q
    ||| |||||||||||| ||||| ||||| ||||| |  |||||||||||    
T  25134 tgtatgccaagttgtcgaagtgggagttctggttaactgaagtgagttt 25086  T

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Target: scaffold0126 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 305
Target Start/End: Complemental strand, 43041 - 42905
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || ||||||||| || | ||||||||| |||| ||||||||||| || ||| |||  |||||||||||| | |||||||||||      
T  43041 tttgtggttgtgtttattgatgatattctgatctattcaaagactgaagaagagcatgcagaacatctgaaaattgtgttgcaaatattgaaagagaaga 42942  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggtt 305  Q
    |||||| ||| |||||||| ||||||||||| |||||    
T  42941 agttgtatgctaagttgtcgaagtgtgagttctggtt 42905  T

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Target: scaffold0090 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 107 - 339
Target Start/End: Complemental strand, 21035 - 20803
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| || ||||| || ||||| ||||| |||||| | || |||||    ||||||||||| ||||| ||||| |||||| | |||||    
T  21035 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcctacctggataaatttgtggtggtattcattgatgacattttgatctattc 20936  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     |    ||||||||||||||| || ||| |||||| ||| |||||||| || | ||||||  |||||| |||||| ||||| ||||||||||| |||||     
T  20935 tagaaatgaggaagagcatgcagaacatctgaggactgtattgcaagtattcatagagaagaagttgtatgccaaattgtcgaagtgtgagttctggtta 20836  T
Q  307 aaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  ||||||||||| ||||| ||| | ||||||    
T  20835 agtgaagtgagttttcttggccatattatttct 20803  T

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Target: scaffold0090; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 107 - 339
Target Start/End: Complemental strand, 25197 - 24965
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| || ||||| || ||||| ||||| |||||| | || |||||    ||||||||||| ||||| ||||| |||||| | |||||    
T  25197 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcctacctggataaatttgtggtggtattcattgatgacattttgatctattc 25098  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     |    ||||||||||||||| || ||| |||||| ||| |||||||| || | ||||||  |||||| |||||| ||||| ||||||||||| |||||     
T  25097 tagaaatgaggaagagcatgcagaacatctgaggactgtattgcaagtattcatagagaagaagttgtatgccaaattgtcgaagtgtgagttctggtta 24998  T
Q  307 aaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  ||||||||||| ||||| ||| | ||||||    
T  24997 agtgaagtgagttttcttggccatattatttct 24965  T

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Target: scaffold0621 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 124 - 339
Target Start/End: Complemental strand, 3601 - 3386
Alignment:
Q  124 tttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagc 223  Q
    |||||||| || |||||| | || |||||| | | | |||| ||||||||||| || ||||| |||||||||||| | || || || ||||| ||||| |    
T  3601 tttatggagtacatgaatcgcatctttcatgcatttttggatcgttttgtggttgttttcattgatgatattttgatttactccaactctgaagaagaac 3502  T
Q  224 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttcct 323  Q
    ||||||||||||||| | | || |||||| | |||||||||||  |  | | ||| || || ||||||||||| || |||||||| ||||||||||| ||    
T  3501 atgctgagcatttgaagctggttttgcaattgttgaaagagaagaaactttatgctaaattatctaagtgtgaattctggttgaaagaagtgagttttct 3402  T
Q  324 tggtcatgtgatttct 339  Q
    ||| ||||| ||||||    
T  3401 tggccatgttatttct 3386  T

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Target: scaffold0304 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0304
Description:

Target: scaffold0304; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 107 - 326
Target Start/End: Original strand, 1605 - 1824
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || || ||  |||| || ||| | ||||||||    |||||||| ||||| || ||||| || ||| | |||||    
T  1605 ctaatgcgcctggtgtgtttatggagtatataaaccgaattttccatgcctatctggataaatttgtggttgtgtttattgatgacatcttgatttattc 1704  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     ||| |||| ||||||||||| ||  || ||| |||||| |||||||| |||||||||||  |||||| |||||||||||| || |||||||| |||||     
T  1705 taagactgaagaagagcatgcagaagatctgaagattgtattgcaagtgttgaaagagaagaagttgtatgccaagttgtcaaaatgtgagttctggtta 1804  T
Q  307 aaggaagtgagtttccttgg 326  Q
    || ||||| ||||| |||||    
T  1805 aatgaagttagttttcttgg 1824  T

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Target: scaffold0034 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 202 - 305
Target Start/End: Original strand, 3168 - 3271
Alignment:
Q  202 tattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtttt 301  Q
    ||||||||| |||| ||||||||||| |||||| ||| |||||| |||||||| |||||||||||  |||||| ||| |||||||| ||||||||||| |    
T  3168 tattcaaagactgaagaagagcatgcagagcatctgaagattgtattgcaagtattgaaagagaaaaagttgtatgctaagttgtcgaagtgtgagttct 3267  T
Q  302 ggtt 305  Q
    ||||    
T  3268 ggtt 3271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 172 - 320
Target Start/End: Complemental strand, 69491 - 69343
Alignment:
Q  172 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 271  Q
    |||||||| || || |||||||||||| | ||||| ||| |||| || |||||||| || |  |||| ||||||||||||  | ||||||||||   |||    
T  69491 gtggtggtatttattgatgatattttgatttattctaagactgaagaggagcatgcagaacgcttgaagattgtgttgcagattttgaaagagagaaagt 69392  T
Q  272 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagttt 320  Q
    ||| |||||||||||| ||||| ||||| | ||| |  |||||||||||    
T  69391 tgtatgccaagttgtcgaagtgcgagttcttgttaagtgaagtgagttt 69343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0719 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0719
Description:

Target: scaffold0719; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 37 - 95
Target Start/End: Complemental strand, 4843 - 4785
Alignment:
Q  37 gatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgcc 95  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  4843 gatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctatgatgcc 4785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 161 - 339
Target Start/End: Complemental strand, 3713 - 3535
Alignment:
Q  161 tggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 260  Q
    |||| ||||| ||||| || ||||| ||||| |||||| | || || ||| |||||||||| |||||||||||||||| || ||| ||| |||| |||||    
T  3713 tggatcgtttcgtggttgttttcattgatgacattttgatttactccaagactgaggaagaacatgctgagcatttgaagactgttttggaagtgttgaa 3614  T
Q  261 agagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    ||||||  |||| | ||| || ||||| |||||||| || |||||||| || |||||||| ||| | ||||| ||||||    
T  3613 agagaaaaagttttatgctaaattgtcaaagtgtgaattatggttgaaagaggtgagttttcttagacatgttatttct 3535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 107 - 305
Target Start/End: Complemental strand, 2055 - 1857
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    ||||||||||  |||| |||||||| || ||||| ||||| || ||| ||||||||||     ||||||| ||||| || ||||| || ||  | |||||    
T  2055 ctaatgcgcctagtgtgtttatggagtatatgaacagaattttccatgcttatctggataaaattgtggttgtgtttattgatgacatcttaatttattc 1956  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggtt 305  Q
     ||| |||| ||||||||||| |||||| ||| |||||| |||||||| |||||||| ||  |||||| |||||||||||| || ||||| ||||||||    
T  1955 taagactgaagaagagcatgcagagcatctgaagattgtattgcaagtgttgaaagaaaataagttgtatgccaagttgtccaaatgtgaattttggtt 1857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 202 - 320
Target Start/End: Complemental strand, 9152 - 9034
Alignment:
Q  202 tattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtttt 301  Q
    ||||||||| |||| ||||||||||| || ||| ||| ||||||||| ||||| |||||||||||  |||||||||| |||||||| ||||||||||| |    
T  9152 tattcaaagactgaagaagagcatgcagaacatctgaagattgtgttacaagttttgaaagagaaaaagttgtgtgctaagttgtcgaagtgtgagttct 9053  T
Q  302 ggttgaaggaagtgagttt 320  Q
     ||| |  |||||||||||    
T  9052 agttaagtgaagtgagttt 9034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 107 - 296
Target Start/End: Complemental strand, 50996 - 50807
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || ||||||||||| |||||| | ||||||||    ||| |||| ||||| || ||||| || ||  | |||||    
T  50996 ctaatgcgcctggtgtgtttatggagtatatgaatagaatttttcatgcctatctggataaatttttggttgtgtttattgatgacatcttaatttattc 50897  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtga 296  Q
     | | |||| ||||||||||| |||||| ||| |||||| |||||||| |||||||| ||  |||||| |||||||||||| || |||||    
T  50896 tatgactgaagaagagcatgcagagcatctgaagattgtattgcaagtgttgaaagataagaagttgtatgccaagttgtccaaatgtga 50807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 187 - 339
Target Start/End: Complemental strand, 31051 - 30899
Alignment:
Q  187 gatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 286  Q
    |||||||||||| | || || |||||| |  |||| |||||||||||||||| | | || |||||||| |||||||||||  || | | ||  || ||||    
T  31051 gatgatattttgatttactccaagtcttaataagaacatgctgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgttaaattgt 30952  T
Q  287 ctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |||||||||| || |||||||| |||||||| || ||||| ||||| ||||||    
T  30951 ctaagtgtgaattctggttgaaagaagtgagctttcttggacatgttatttct 30899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 67 - 260
Target Start/End: Original strand, 201548 - 201741
Alignment:
Q  67 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggacc 166  Q
    |||||||| || || ||||| |||||||| || || ||  ||||  |||| ||||| |||||||| || ||||||||||| || ||| ||||| |||| |    
T  201548 tatggacattacgaatattcagtgatgcctttcggtgttactaacacgccgggtgtgtttatggagtacatgaatagaattttccatgcttatttggatc 201647  T
Q  167 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 260  Q
    | |||||||| ||||| || |||||||||||| | || || ||| |||| ||||| ||||| || ||||||| | ||||||||||||| |||||    
T  201648 ggtttgtggttgtgtttattgatgatattttgatatactctaagactgaagaagaacatgcagaacatttgaaggttgtgttgcaagtgttgaa 201741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 326
Target Start/End: Complemental strand, 324795 - 324671
Alignment:
Q  202 tattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtttt 301  Q
    ||||||| | |||| ||||||||||  || ||| ||| |||||| |||||| | |||||||||||  |||||| ||| |||| ||| |||||||| || |    
T  324795 tattcaaggactgaagaagagcatgtagaacatctgaagattgtattgcaaattttgaaagagaaaaagttgtatgctaagtcgtcgaagtgtgaattct 324696  T
Q  302 ggttgaaggaagtgagtttccttgg 326  Q
    |||| |  ||||| ||||| |||||    
T  324695 ggttaagtgaagtaagttttcttgg 324671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 187 - 339
Target Start/End: Original strand, 10986 - 11138
Alignment:
Q  187 gatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 286  Q
    |||||||||||  | ||||| ||| |||| || |||||||| || ||| |||||||||| |||||||| || ||||||||  |||||| |||||| ||||    
T  10986 gatgatattttaatttattctaagactgaagaggagcatgcagaacatctgaggattgtattgcaagtatttaaagagaagaagttgtatgccaaattgt 11085  T
Q  287 ctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    | || |||||||||||| | |  ||||| ||||||||||||||| | ||||||    
T  11086 caaaatgtgagttttggctaagtgaagtaagtttccttggtcatattatttct 11138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 159 - 339
Target Start/End: Original strand, 195659 - 195839
Alignment:
Q  159 tctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttg 258  Q
    |||||| ||||||||||| || || || |||||||||||| | || || |||||||| ||||| |||||||||||| ||| | |||| |||||||| |||    
T  195659 tctggatcgttttgtggttgtctttatcgatgatattttgatttactccaagtctgaagaagaacatgctgagcatctgaaggttgtcttgcaagtgttg 195758  T
Q  259 aaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    ||||||||  |  | | ||| ||  | |||||||||||||| |||||||| || || ||||| ||||| ||||| ||||||    
T  195759 aaagagaagaaactttatgctaaactatctaagtgtgagttctggttgaaagaggtaagttttcttggccatgtcatttct 195839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 107 - 326
Target Start/End: Original strand, 1665 - 1884
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| || ||||| || ||||| ||||| |||||| | || |||||    ||||||||  | ||||| ||||| ||| || |  ||||    
T  1665 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcctacctggataaatttgtggttctattcattgatgacattctgattaattc 1764  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
    || | | || ||||||||||| || ||| ||| |||||| |||||||| |||||||||||  |||||| |||||| ||||| ||||||||||| |||||     
T  1765 aaggacagaagaagagcatgcagaacatctgaagattgtattgcaagtattgaaagagaagaagttgtatgccaaattgtcgaagtgtgagttctggtta 1864  T
Q  307 aaggaagtgagtttccttgg 326  Q
    |  ||||||||||| |||||    
T  1865 agtgaagtgagttttcttgg 1884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 339
Target Start/End: Complemental strand, 180 - 13
Alignment:
Q  172 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 271  Q
    ||||| || ||||| |||||||||||| | || || |||||||| ||||| |||||||||||||||| | | || |||||||| |||||||||||  ||     
T  180 gtggttgttttcattgatgatattttgatttactccaagtctgaagaagaacatgctgagcatttgaagctggttttgcaagtgttgaaagagaagaagc 81  T
Q  272 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    | | ||| || || ||||||||||| || ||||| || |||||||| || ||||| ||||| ||||||    
T  80 tttatgcgaaattatctaagtgtgaattctggttaaaagaagtgagctttcttgggcatgttatttct 13  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 339
Target Start/End: Original strand, 10242 - 10409
Alignment:
Q  172 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 271  Q
    ||||| ||||| || ||||| || ||| | ||||||||| |||| ||||||||||| || ||| ||| |||||| |||||||| |||||||| ||  |||    
T  10242 gtggttgtgtttattgatgacatcttgatttattcaaagactgaagaagagcatgcagaacatctgaagattgtattgcaagtattgaaagaaaagaagt 10341  T
Q  272 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    ||| || ||||||||| ||||||||||| ||||| |  ||||| ||||| ||||| ||| | ||||||    
T  10342 tgtatgtcaagttgtcaaagtgtgagttctggttaagtgaagtaagttttcttggccatattatttct 10409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 107 - 326
Target Start/End: Complemental strand, 24400 - 24181
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| || || |||||||| || |||||  |||| || ||| ||| ||||||    |||||||| ||||| || ||||||||| || | |||||    
T  24400 ctaatgcgcctggggtgtttatggagtatatgaaccgaattttccatgcttctctggataaatttgtggttgtgtttattgatgatattctgatttattc 24301  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     ||| |||| || |||||||| || ||| ||| ||||||||||||||| || ||||| ||  |||||| ||| |||||||| ||||||||||| |||||     
T  24300 taagactgaagaggagcatgcagaacatctgaagattgtgttgcaagtattaaaagaaaagaagttgtatgctaagttgtcgaagtgtgagttctggtta 24201  T
Q  307 aaggaagtgagtttccttgg 326  Q
    |  ||||| ||||| |||||    
T  24200 agtgaagtaagttttcttgg 24181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 107 - 326
Target Start/End: Original strand, 44537 - 44756
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || ||||| | ||| || ||| | ||||||||    |||||||| ||||| || ||||| || ||  | |||||    
T  44537 ctaatgcgcctggtgtgtttatggagtatatgaaaaaaattttccatgcatatctggataaatttgtggttgtgtttattgatgacatcttaatttattc 44636  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     ||| || | ||||||||| |  | ||| ||| |||||| |||||||| |||||||| ||  |||||| |||||||||||| || ||||| ||||||||     
T  44637 taagactaaagaagagcatacaaaacatctgaagattgtattgcaagtattgaaagaaaataagttgtatgccaagttgtcaaaatgtgaattttggtta 44736  T
Q  307 aaggaagtgagtttccttgg 326  Q
    |  ||||| ||||| |||||    
T  44737 agtgaagtaagttttcttgg 44756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 320
Target Start/End: Complemental strand, 53169 - 53018
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| || || || ||||||||| || | ||||| ||| |||| ||||||||||| || ||| ||| ||||||||||||| | |||||||||||      
T  53169 tttgtggttgtatttattgatgatattctgatttattctaagactgaagaagagcatgcagaacatctgaagattgtgttgcaaatattgaaagagaaaa 53070  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagttt 320  Q
    |||||| ||  |||||||| ||||||||||| ||||| |  |||||||||||    
T  53069 agttgtatgttaagttgtcgaagtgtgagttctggttaagtgaagtgagttt 53018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1423 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold1423
Description:

Target: scaffold1423; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 181 - 339
Target Start/End: Original strand, 1576 - 1734
Alignment:
Q  181 ttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgcca 280  Q
    ||||| |||||||||||| | || || |||||||| ||||| |||| ||||||||||| | | || |||||||| |||||||||||  || | | ||| |    
T  1576 ttcattgatgatattttgatttactccaagtctgaagaagaacatgttgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcga 1675  T
Q  281 agttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    | |||||||||||||| || |||||||| |||||||| || ||||  ||||| ||||||    
T  1676 aattgtctaagtgtgaattctggttgaaagaagtgagctttcttgtacatgttatttct 1734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 67 - 325
Target Start/End: Original strand, 16058 - 16315
Alignment:
Q  67 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggacc 166  Q
    |||||||| ||||||||||| |||||||| || || ||  | || ||||||||||| |||||| | || |||||| | || |||||| | ||||| || |    
T  16058 tatggacattatgagtattcagtgatgcctttgggtgttacaaacgcgccaggtgtgtttatgtagtacatgaatcgcatttttcatgcgtatctagatc 16157  T
Q  167 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
    |||| |||||  | ||||| |||||||||||| | || || ||| |||| || ||  ||||||||||||||| |||| | |||||||| || || |||||    
T  16158 gtttcgtggttatattcatcgatgatattttgatatactctaagactgaagaggaatatgctgagcatttgaagatt-ttttgcaagtgttcaaggagaa 16256  T
Q  267 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttg 325  Q
      |||| | ||| |||||||| |||||||| || |||||||| || || ||||| ||||    
T  16257 gaagttatatgctaagttgtcaaagtgtgaattctggttgaatgaggtaagttttcttg 16315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 109 - 266
Target Start/End: Complemental strand, 6055 - 5898
Alignment:
Q  109 aatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 208  Q
    |||||||||||||| ||||||||||| |||||| | ||  ||||  | | | | || || || ||||| |||||||| |||||||||||| | || || |    
T  6055 aatgcgccaggtgtgtttatggaatacatgaatcgtattattcaagcattttttgatcgcttcgtggttgtgttcatcgatgatattttgatatactcga 5956  T
Q  209 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
    |||| || ||||| |||||||||||||||| |||||| || ||||| |||||||||||    
T  5955 agtccgaagaagaacatgctgagcatttgaagattgttttacaagtgttgaaagagaa 5898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 109 - 266
Target Start/End: Complemental strand, 13185 - 13028
Alignment:
Q  109 aatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 208  Q
    |||||||||||||| ||||||||||| |||||| | ||  ||||  | | | | || || || ||||| |||||||| |||||||||||| | || || |    
T  13185 aatgcgccaggtgtgtttatggaatacatgaatcgtattattcaagcattttttgatcgcttcgtggttgtgttcatcgatgatattttgatatactcga 13086  T
Q  209 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
    |||| || ||||| |||||||||||||||| |||||| || ||||| |||||||||||    
T  13085 agtccgaagaagaacatgctgagcatttgaagattgttttacaagtgttgaaagagaa 13028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 82 - 339
Target Start/End: Complemental strand, 1208 - 951
Alignment:
Q  82 tattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgt 181  Q
    ||||| |||||||| || || ||  |||| ||||| || || ||||||||||| |||||| | || |||||| ||||| |||| |  ||||| || ||||    
T  1208 tattcggtgatgcctttcggtgttactaacgcgccgggagtgtttatggaatatatgaatcgtatttttcatgcttatttggatcagtttgttgttgtgt 1109  T
Q  182 tcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaa 281  Q
    | |||||||||||| || | || || ||| | || || || ||||| ||||||||||| ||||| ||||||||  |||| |||||  |||| | ||||||    
T  1108 ttatagatgatattatgatatactctaagaccgaagaggaacatgcggagcatttgagaattgttttgcaagtactgaaggagaagaagttatatgccaa 1009  T
Q  282 gttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
     || || |||||||| || |||||||| ||||||| ||| ||||| ||| | ||||||    
T  1008 attatcgaagtgtgaattctggttgaacgaagtgacttttcttggccatatcatttct 951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 339
Target Start/End: Original strand, 44846 - 44995
Alignment:
Q  190 gatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtcta 289  Q
    ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||| | |||||||||||  |  | | |||||| |||||||    
T  44846 gatattttgatatactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaaatgttgaaagagaagaaactttatgccaaattgtcta 44945  T
Q  290 agtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    ||||||| || |||||||| || |||||||| ||||| ||||| ||||||    
T  44946 agtgtgacttctggttgaaagaggtgagttttcttggccatgttatttct 44995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 305
Target Start/End: Original strand, 8928 - 9126
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||| | || |||||   ||| || ||| ||||||||||    |||||||| ||||| || |||||||| ||  | |||||    
T  8928 ctaatgcgcctggtgtgtttatgaagtacatgaacttaattttccatgcttatctggataaatttgtggtcgtgtttattgatgatatctttatttattc 9027  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggtt 305  Q
     ||| |||| ||||||||||| |||||| |||  ||| |||||||||| |||||||| ||  |||||| |||||||||||| || ||||| || |||||    
T  9028 taagactgaagaagagcatgcagagcatctgaaaattatgttgcaagtgttgaaagaaaagaagttgtatgccaagttgtccaaatgtgaattctggtt 9126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 339
Target Start/End: Complemental strand, 40268 - 40107
Alignment:
Q  178 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 277  Q
    ||||| || ||||| |||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||    
T  40268 gtgtttatcgatgacattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatg 40169  T
Q  278 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    | || |||||||||||||| || |||||||| ||||| ||||| ||||| ||||| ||||||    
T  40168 ctaaattgtctaagtgtgaattctggttgaaagaagtaagttttcttggccatgttatttct 40107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 107 - 320
Target Start/End: Original strand, 22305 - 22518
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    ||||||| || ||||| |||| |||||| |||||| | || | |||| ||||| | || ||  |||| || |||||||| |||||||||||| | || ||    
T  22305 ctaatgcaccgggtgtatttacggaatacatgaattgcatttctcatgcttatttagatcgcattgttgttgtgttcattgatgatattttgatatactc 22404  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     |||||||| ||||| || ||  ||||||||| |||||| ||||||||  || |||||||   ||| | |||||||||||| |||||||| || ||||||    
T  22405 taagtctgaagaagaacacgccaagcatttgaagattgttttgcaagtgctgcaagagaaaacgttatatgccaagttgtcaaagtgtgaattctggttg 22504  T
Q  307 aaggaagtgagttt 320  Q
    || || ||||||||    
T  22505 aatgaggtgagttt 22518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 107 - 296
Target Start/End: Original strand, 49995 - 50184
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || |||||  |||| || ||| | ||||||||    |||||||| ||||| || ||||| || ||  | |||||    
T  49995 ctaatgcgcctggtgtgtttatggagtatatgaaccgaattttccatgcctatctggataaatttgtggttgtgtttattgatgacatcttaatttattc 50094  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtga 296  Q
     ||| |||| ||||||||||| |||||| ||| ||||||||| ||||| |||||||| ||  |||||| |||||||||||| || |||||    
T  50095 taagactgaagaagagcatgcagagcatctgaagattgtgtttcaagtgttgaaagaaaagaagttgtatgccaagttgtcaaaatgtga 50184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 59 - 339
Target Start/End: Complemental strand, 1000 - 720
Alignment:
Q  59 gaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatcctta 158  Q
    ||||| ||||||| || |||||||||   |||||||| || || ||  | |||||||| || || |||||||| || |||||| | || |||||| | |     
T  1000 gaacgcggtatggccattatgagtataaggtgatgccgttcggtgttacaaatgcgcctggagtatttatggagtacatgaatcgcatctttcatgcatt 901  T
Q  159 tctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttg 258  Q
    | |||| || || ||||| || || || |||||||||||| | || |  |||||||| ||||| |||||||||||||||| | | || |||||||| |||    
T  900 tttggatcggttcgtggttgtttttatcgatgatattttgatttacttcaagtctgaagaagaacatgctgagcatttgaagctggttttgcaagtgttg 801  T
Q  259 aaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    ||||||||  |  | | ||| || ||||||||| |||| || |||||||| |||||||| || ||||| ||||| ||||||    
T  800 aaagagaagaacctttatgcgaaattgtctaagggtgaattctggttgaaagaagtgagctttcttggacatgttatttct 720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 124 - 337
Target Start/End: Original strand, 916 - 1126
Alignment:
Q  124 tttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagc 223  Q
    |||||||| || |||||| | || |||||| | | | |||| ||||| ||||| || ||||| |||||||||||| | || || |||||||| |||   |    
T  916 tttatggagtacatgaatcgcatctttcatgcatttttggatcgtttcgtggttgttttcattgatgatattttgatttactccaagtctgaagaa---c 1012  T
Q  224 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttcct 323  Q
    ||||||||||||||| | | || |||||||| |||||||||||  || | | ||| || |||||||||||||| || |||||||  |||||||| || ||    
T  1013 atgctgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcgaaattgtctaagtgtgaattctggttgagagaagtgagctttct 1112  T
Q  324 tggtcatgtgattt 337  Q
    ||| ||||| ||||    
T  1113 tggacatgttattt 1126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 107 - 326
Target Start/End: Original strand, 21635 - 21854
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || |||||  |||| || ||  | ||||||||    |||||||| ||||| || ||||| || ||| | |||||    
T  21635 ctaatgcgcctggtgtgtttatggagtatatgaaccgaattttccacgcctatctggataaatttgtggttgtgtttattgatgacatcttgatttattc 21734  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     ||| | || ||||||||||| || ||| ||| |||||| |||||||| |||||||||||  |||||| ||| |||||||| || |||||||| |||||     
T  21735 gaagacagaagaagagcatgcagaacatctgaagattgtattgcaagtattgaaagagaagaagttgtatgcgaagttgtcaaaatgtgagttctggtta 21834  T
Q  307 aaggaagtgagtttccttgg 326  Q
    |  ||||| ||||| |||||    
T  21835 agtgaagtaagttttcttgg 21854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 326
Target Start/End: Original strand, 13456 - 13675
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || |||||  |||| || ||  | ||||||||    |||||||| ||||| || ||||| || ||| | |||||    
T  13456 ctaatgcgcctggtgtgtttatggagtatatgaaccgaattttccacgcctatctggataaatttgtggttgtgtttattgatgacatcttgatttattc 13555  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     ||| | || ||||||||||| || ||| ||| |||||| |||||||| |||||||||||  |||||| ||| || ||||| || |||||||| |||||     
T  13556 gaagacagaagaagagcatgcagaacatctgaagattgtattgcaagtattgaaagagaagaagttgtatgcaaaattgtcaaaatgtgagttctggtta 13655  T
Q  307 aaggaagtgagtttccttgg 326  Q
    |  ||||| ||||| |||||    
T  13656 agtgaagtaagttttcttgg 13675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 212 - 339
Target Start/End: Original strand, 23299 - 23426
Alignment:
Q  212 ctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagga 311  Q
    |||| ||||| |||||||||||| ||| |||||| || ||||| |||||||||||  |  | | ||||||  ||||||||||||| || |||||||| ||    
T  23299 ctgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgccaaactgtctaagtgtgaattctggttgaaaga 23398  T
Q  312 agtgagtttccttggtcatgtgatttct 339  Q
    ||||||||| ||||| ||||| ||||||    
T  23399 agtgagttttcttggccatgttatttct 23426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 169 - 320
Target Start/End: Original strand, 12481 - 12632
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| || || || ||| ||||| || | ||||||||| |||| ||||||||||| || ||| ||| ||||||||||||| | |||||||||||      
T  12481 tttgtggttgtatttattgataatattctgatctattcaaagactgaagaagagcatgcagaacatctgaagattgtgttgcaattattgaaagagaaaa 12580  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagttt 320  Q
    |||||| ||| |||||||| |||||| |||| ||||  |  |||||||||||    
T  12581 agttgtatgctaagttgtcaaagtgtaagttctggtaaagtgaagtgagttt 12632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 67 - 326
Target Start/End: Complemental strand, 28751 - 28492
Alignment:
Q  67 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggacc 166  Q
    |||||||| |||||||||   |||||||| || || ||  |||||||||| ||||| |||||||| || ||||| ||||| || ||| | ||||||||      
T  28751 tatggacattatgagtataaggtgatgcctttcggtgttactaatgcgcctggtgtatttatggagtatatgaacagaattttccatgcctatctggata 28652  T
Q  167 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 266  Q
      |||||||| ||||| || ||||||||  |  | ||||| | |  ||| ||| ||||||| |||||| ||| ||||||||||||||| |||||||| ||    
T  28651 aatttgtggttgtgtttattgatgatatcctaatttattctaggaatgaagaaaagcatgcagagcatctgatgattgtgttgcaagtgttgaaagaaaa 28552  T
Q  267 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttgg 326  Q
      | |||| |||||||||||| || ||||| || ||||| |  ||||| ||||| |||||    
T  28551 gaaattgtatgccaagttgtccaaatgtgaattctggttaagtgaagtaagttttcttgg 28492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 44; Significance: 5e-16; HSPs: 4)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 172 - 299
Target Start/End: Original strand, 50365 - 50492
Alignment:
Q  172 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 271  Q
    ||||| || ||||| |||||||||||  | ||||| ||| | || ||||||||||| || ||| ||| ||||||||||||||| |||||||||||  |||    
T  50365 gtggttgtattcattgatgatattttaatttattctaagacggaagaagagcatgcggaacatctgaagattgtgttgcaagtgttgaaagagaaaaagt 50464  T
Q  272 tgtgtgccaagttgtctaagtgtgagtt 299  Q
    ||| ||| |||||||| ||||| |||||    
T  50465 tgtatgctaagttgtcgaagtgcgagtt 50492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 172 - 299
Target Start/End: Original strand, 59399 - 59526
Alignment:
Q  172 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 271  Q
    ||||| || ||||| |||||||||||  | ||||| ||| | || ||||||||||| || ||| ||| ||||||||||||||| |||||||||||  |||    
T  59399 gtggttgtattcattgatgatattttaatttattctaagacggaagaagagcatgcggaacatctgaagattgtgttgcaagtgttgaaagagaaaaagt 59498  T
Q  272 tgtgtgccaagttgtctaagtgtgagtt 299  Q
    ||| ||| |||||||| ||||| |||||    
T  59499 tgtatgctaagttgtcgaagtgcgagtt 59526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 172 - 299
Target Start/End: Original strand, 65787 - 65914
Alignment:
Q  172 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 271  Q
    ||||| || ||||| |||||||||||  | ||||| ||| | || ||||||||||| || ||| ||| ||||||||||||||| |||||||||||  |||    
T  65787 gtggttgtattcattgatgatattttaatttattctaagacggaagaagagcatgcggaacatctgaagattgtgttgcaagtgttgaaagagaaaaagt 65886  T
Q  272 tgtgtgccaagttgtctaagtgtgagtt 299  Q
    ||| ||| |||||||| ||||| |||||    
T  65887 tgtatgctaagttgtcgaagtgcgagtt 65914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 305
Target Start/End: Complemental strand, 28808 - 28610
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| |||||  ||||||| || |||||  |||| || ||| |||| |||||    |||||||| ||||| || ||||| || ||| | |||||    
T  28808 ctaatgcgcctggtgtgcttatggagtatatgaaccgaattttccatgcttacctggataaatttgtggttgtgtttattgatgacatcttgatttattc 28709  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggtt 305  Q
     ||| |||| ||||||||||| || ||| ||| ||| || ||| |||| |||||||| ||  |||||| ||| |||||||| || |||||||| |||||    
T  28708 taagactgaagaagagcatgcagaacatctgaagatcgtcttgaaagtgttgaaagaaaagaagttgtctgcgaagttgtcaaaatgtgagttctggtt 28610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 305
Target Start/End: Complemental strand, 4362 - 4164
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| |||||||| || |||||  |||| || ||| | ||||||||    |||||||| ||||| || ||| | || ||| | ||||     
T  4362 ctaatgcgcctggtgtgtttatggagtatatgaaccgaattttccatgcctatctggataaatttgtggttgtgtttattgatcacatcttgatttatta 4263  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggtt 305  Q
     ||| |||| |||||||||||  | ||| ||| |||||| |||||||| |||||||||||  |||||| |||||||||||| || ||||| ||||||||    
T  4262 taagactgaagaagagcatgcataacatctgaagattgtattgcaagtgttgaaagagaagaagttgtatgccaagttgtcaaaatgtgaattttggtt 4164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 187 - 332
Target Start/End: Original strand, 6531 - 6676
Alignment:
Q  187 gatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 286  Q
    |||||||||||| | || || |||||||| ||||| |||||||||||||||| | | || |||||||| |||||||||||  || | | ||| || ||||    
T  6531 gatgatattttgatttactccaagtctgaagaagaacatgctgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcgaaattgt 6630  T
Q  287 ctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgt 332  Q
    ||||||| || || |||||||| |||||| | || ||||| |||||    
T  6631 ctaagtgcgaattctggttgaaagaagtgtgctttcttggacatgt 6676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 186 - 339
Target Start/End: Original strand, 13410 - 13563
Alignment:
Q  186 agatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttg 285  Q
    ||||||||||||| | || || |||||||| ||||| |||| ||||||||||| | | || |||||||| |||||||||||  || | | ||| || |||    
T  13410 agatgatattttgatttactccaagtctgaagaagaacatgatgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcgaaattg 13509  T
Q  286 tctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |||||||| || || ||||| || |||||||| || ||||| ||||| ||||||    
T  13510 tctaagtgcgaattctggttaaaagaagtgagctttcttggacatgttatttct 13563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 3)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 169 - 326
Target Start/End: Original strand, 422 - 579
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || ||||| ||| || | ||||||| | |||| ||| ||||| | || ||| ||| ||||||||||||  | |||||||||||      
T  422 tttgtggttgtgtttattgatgacattctgatctattcaaggactgaagaatagcattcagaacatctgaagattgtgttgcagattttgaaagagaaaa 521  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttgg 326  Q
    |||||| ||| |||||||| ||||||||||| ||||| |  ||||||||||| |||||    
T  522 agttgtatgctaagttgtcgaagtgtgagttctggttaagtgaagtgagttttcttgg 579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 169 - 326
Target Start/End: Original strand, 4742 - 4899
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || ||||| ||| || | ||||||| | |||| ||| ||||| | || ||| ||| ||||||||||||  | |||||||||||      
T  4742 tttgtggttgtgtttattgatgacattctgatctattcaaggactgaagaatagcattcagaacatctgaagattgtgttgcagattttgaaagagaaaa 4841  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttgg 326  Q
    |||||| ||| |||||||| ||||||||||| ||||| |  ||||||||||| |||||    
T  4842 agttgtatgctaagttgtcgaagtgtgagttctggttaagtgaagtgagttttcttgg 4899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 339
Target Start/End: Original strand, 33953 - 34105
Alignment:
Q  187 gatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 286  Q
    ||||| |||||| | ||||| | |||||| ||||||||||| |||||||| | |||| |||||||||| || || || ||  || ||| |||||||||||    
T  33953 gatgacattttgatttattctaggtctgaagaagagcatgcagagcatttaaagattatgttgcaagtgttaaaggaaaagaagatgtatgccaagttgt 34052  T
Q  287 ctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    | || ||||| || ||||| |  ||||| ||||| ||||| ||| | ||||||    
T  34053 ccaaatgtgaattctggttaagtgaagtaagttttcttggccatattatttct 34105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 169 - 326
Target Start/End: Original strand, 458 - 615
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || ||||| ||| || | ||||||| | |||| ||| ||||| | || ||| ||| ||||||||||||  | |||||||||||      
T  458 tttgtggttgtgtttattgatgacattctgatctattcaaggactgaagaatagcattcagaacatctgaagattgtgttgcagattttgaaagagaaaa 557  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttgg 326  Q
    |||||| ||| |||||||| ||||||||||| ||||| |  ||||||||||| |||||    
T  558 agttgtatgctaagttgtcgaagtgtgagttctggttaagtgaagtgagttttcttgg 615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 107 - 299
Target Start/End: Original strand, 14833 - 15025
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||| ||||| ||||| |||||||| || ||||||  ||| || ||| ||| ||||||    ||||| |||||||| || |||||||||||  | |||||    
T  14833 ctaacgcgcctggtgtttttatggagtacatgaatctaatcttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 14932  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtt 299  Q
     |||  |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||   ||||| ||| |||||||| || ||||||||    
T  14933 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaaggaaaagaggttgtatgcaaagttgtcgaaatgtgagtt 15025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 124 - 340
Target Start/End: Complemental strand, 8541 - 8325
Alignment:
Q  124 tttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagc 223  Q
    |||||||| || |||||| | || |||||| | | | |||| ||||| ||||| || || || |||||||||||| | || || |||||| ||||||| |    
T  8541 tttatggagtacatgaatcgcatctttcatgcatttttggatcgtttcgtggttgtttttatcgatgatattttgatttactccaagtctaaggaagaac 8442  T
Q  224 atgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttcct 323  Q
    || |||||||||||| | | || |||||||| |||||||| ||  ||   | ||| || ||||||||||| || || |||||||| |||||||| || ||    
T  8441 attctgagcatttgaagctggttttgcaagtgttgaaagaaaagaagcattatgcgaaattgtctaagtgcgaattctggttgaaagaagtgagctttct 8342  T
Q  324 tggtcatgtgatttcta 340  Q
    ||| ||||| |||||||    
T  8341 tggacatgttatttcta 8325  T

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Target: scaffold0139 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 326
Target Start/End: Complemental strand, 37739 - 37615
Alignment:
Q  202 tattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtttt 301  Q
    ||||||||| |||| ||||||||||| || ||| ||| |||||| ||  |||| |||||||| ||  |||||| ||| |||||||| |||||||||||||    
T  37739 tattcaaagactgaagaagagcatgcagaacatctgaagattgtattagaagtattgaaagaaaagaagttgtatgctaagttgtcaaagtgtgagtttt 37640  T
Q  302 ggttgaaggaagtgagtttccttgg 326  Q
    |||| |   |||||||||| |||||    
T  37639 ggttaagtaaagtgagttttcttgg 37615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 187 - 339
Target Start/End: Complemental strand, 7327 - 7175
Alignment:
Q  187 gatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 286  Q
    |||||||||||| | || || ||| | |||||||| |||| ||||||||||| | | || |||||||| |||||||||||  |  | | ||| || ||||    
T  7327 gatgatattttgatttactccaagaccgaggaagaacatgttgagcatttgaagttggttttgcaagtgttgaaagagaagaaactttatgcgaaattgt 7228  T
Q  287 ctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |||||||||| || ||||| || ||||||||||| ||||| ||||| ||||||    
T  7227 ctaagtgtgaattctggttaaaagaagtgagttttcttggacatgttatttct 7175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 338
Target Start/End: Complemental strand, 16261 - 16113
Alignment:
Q  190 gatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtcta 289  Q
    ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||| || |||||||    
T  16261 gatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaaatttatgctaacttgtcta 16162  T
Q  290 agtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 338  Q
    ||||||| || |||||||| ||| | ||||| ||||| ||||| |||||    
T  16161 agtgtgaattctggttgaaagaattaagttttcttggccatgttatttc 16113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 338
Target Start/End: Complemental strand, 2542 - 2375
Alignment:
Q  172 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 271  Q
    ||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |      
T  2542 gtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaataacc 2443  T
Q  272 tgtgtgccaagtt-gtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 338  Q
    | | ||| || || |||||||||||| || |||||||| ||| | ||||| ||||| ||||| |||||    
T  2442 tttatgctaacttggtctaagtgtgaattctggttgaaagaattaagttttcttggccatgttatttc 2375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 82 - 330
Target Start/End: Original strand, 42202 - 42450
Alignment:
Q  82 tattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgt 181  Q
    ||||| |||||||| || || ||  |||| |||| ||| || ||||||||||| ||||||   || |||||| ||||| |||| || |||||  | ||||    
T  42202 tattcggtgatgcctttcggtgttactaacgcgcaaggagtgtttatggaatatatgaatcatatttttcatgcttatttggatcgatttgtttttgtgt 42301  T
Q  182 tcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaa 281  Q
    | |||||||||||| || | || || ||| | ||||| || ||||| |||||||||||  |||| ||||||||  |||| |||||  |||| | |||||     
T  42302 ttatagatgatattctgatatactccaagaccgaggaggaacatgccgagcatttgagatttgttttgcaagtgctgaaggagaagaagttatatgccag 42401  T
Q  282 gttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcat 330  Q
     || || ||||| || || |||||||| ||||||||||| |||||||||    
T  42402 tttatcgaagtgcgaattctggttgaacgaagtgagttttcttggtcat 42450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 326
Target Start/End: Complemental strand, 4840 - 4716
Alignment:
Q  202 tattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtttt 301  Q
    ||||| ||| |||| ||||||||||| || ||| ||| |||||| || ||||| |||||||| ||  |||||| ||| |||||||| || |||||||| |    
T  4840 tattctaagactgaagaagagcatgcagaacatctgaagattgtattacaagtattgaaagaaaagaagttgtatgctaagttgtcgaattgtgagttct 4741  T
Q  302 ggttgaaggaagtgagtttccttgg 326  Q
    |||| |  ||||| ||||| |||||    
T  4740 ggttaagtgaagtcagttttcttgg 4716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1373 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1373
Description:

Target: scaffold1373; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 339
Target Start/End: Original strand, 1067 - 1186
Alignment:
Q  220 gagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtt 319  Q
    |||||||| |||||| |||| |||||||||||||| |||||||| ||   ||||| ||| |||||||| || |||||||| ||||| |  ||||||||||    
T  1067 gagcatgcagagcatctgagaattgtgttgcaagttttgaaagaaaagaggttgtatgcaaagttgtcaaaatgtgagttctggttaagtgaagtgagtt 1166  T
Q  320 tccttggtcatgtgatttct 339  Q
    | || |||||| | ||||||    
T  1167 ttctgggtcatattatttct 1186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0865 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 326
Target Start/End: Original strand, 2392 - 2611
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| || ||||| || |||||  |||| || ||| ||||| ||||    |||||||| ||||| || ||||||||| |  | |||||    
T  2392 ctaatgcgcctggtgtgttcatggagtatatgaaccgaattttccatgcttatttggataaatttgtggttgtgtttattgatgatattctaatttattc 2491  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     |||  ||| ||||||||||| |||||| ||| |||| |||||||||| || ||||| |   |||||| ||||||||||||||| ||||| || |||||     
T  2492 taagaatgaagaagagcatgcagagcatctgaagattttgttgcaagtgtttaaagaaaggaagttgtatgccaagttgtctaaatgtgaattctggtta 2591  T
Q  307 aaggaagtgagtttccttgg 326  Q
    |  ||||| ||||| |||||    
T  2592 agtgaagtaagttttcttgg 2611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 339
Target Start/End: Original strand, 10074 - 10241
Alignment:
Q  172 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 271  Q
    |||||||| || || |||||||| ||  | ||||| ||| |||| || |||||||| || ||| ||||||||||||| |  || |||||||| ||  |||    
T  10074 gtggtggtatttattgatgatatgttaatttattctaagactgaagaggagcatgcagaacatctgaggattgtgttacgtgttttgaaagaaaagaagt 10173  T
Q  272 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    ||| |||||| ||||| || |||||||||||||| |  ||||| ||||||||||| ||| | ||||||    
T  10174 tgtatgccaaattgtcaaaatgtgagttttggttaagtgaagtaagtttccttggccatattatttct 10241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 339
Target Start/End: Complemental strand, 17735 - 17608
Alignment:
Q  212 ctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagga 311  Q
    |||| ||||| |||||||||||||||| | | || |||||||| |||||||||||  |  | | ||| || || ||||||||||| || |||||||| ||    
T  17735 ctgaagaagaacatgctgagcatttgaagctggttttgcaagtgttgaaagagaagaatctttatgctaaattatctaagtgtgaattctggttgaaaga 17636  T
Q  312 agtgagtttccttggtcatgtgatttct 339  Q
    ||||||||| ||||| ||||| ||||||    
T  17635 agtgagttttcttggccatgttatttct 17608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 326
Target Start/End: Original strand, 29405 - 29624
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| || ||||| || |||||  |||| || ||| ||||| ||||    |||||||| ||||| || ||||||||| |  | |||||    
T  29405 ctaatgcgcctggtgtgttcatggagtatatgaaccgaattttccatgcttatttggataaatttgtggttgtgtttattgatgatattctaatttattc 29504  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     |||  ||| ||||||||||| |||||| ||| |||| |||||||||| || ||||| |   |||||| ||||||||||||||| ||||| || |||||     
T  29505 taagaatgaagaagagcatgcagagcatctgaagattttgttgcaagtgtttaaagaaaggaagttgtatgccaagttgtctaaatgtgaattctggtta 29604  T
Q  307 aaggaagtgagtttccttgg 326  Q
    |  ||||| ||||| |||||    
T  29605 agtgaagtaagttttcttgg 29624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 339
Target Start/End: Complemental strand, 8161 - 8003
Alignment:
Q  181 ttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgcca 280  Q
    ||||| |||||||||||| | || || |||| |||||||||  ||| ||||||||||| | | || |||||||| |||||||||||  || | | ||| |    
T  8161 ttcattgatgatattttgatttactccaagtttgaggaagaatatgttgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcga 8062  T
Q  281 agttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    | ||||||||||| || || |||||||| |||||||| || |||||  |||| ||||||    
T  8061 aattgtctaagtgcgaattctggttgaaagaagtgagctttcttggatatgttatttct 8003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 339
Target Start/End: Complemental strand, 17357 - 17199
Alignment:
Q  181 ttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgcca 280  Q
    ||||| |||||||||||| | || || |||| ||| |||||  ||  ||||||||||| | | || |||||||| |||||||||||  || | | ||| |    
T  17357 ttcattgatgatattttgatttactccaagtttgatgaagaatattttgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcga 17258  T
Q  281 agttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    | ||||||||||| || || |||||||| |||||||| || |||||  |||| ||||||    
T  17257 aattgtctaagtgcgaattctggttgaaagaagtgagctttcttggatatgttatttct 17199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 339
Target Start/End: Complemental strand, 20726 - 20556
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| || ||||| |||||||||||  | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| || | ||||||      
T  20726 tttgtggttgttttcattgatgatattttaatttactctaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttaagagagaaga 20627  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  | | ||| || || |||||||||||||| ||| |||| ||||| ||||| ||||| ||||| ||||||    
T  20626 aactttatgctaaattatctaagtgtgagttctggatgaaagaagtaagttttcttggccatgttatttct 20556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 339
Target Start/End: Complemental strand, 36150 - 35980
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| || ||||| |||||||||||  | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| || | ||||||      
T  36150 tttgtggttgttttcattgatgatattttaatttactctaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttaatagagaaga 36051  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  | | ||| || || |||||||||||||| ||| |||| ||||| ||||| ||||| ||||| ||||||    
T  36050 aactttatgctaaattatctaagtgtgagttctggatgaaagaagtaagttttcttggccatgttatttct 35980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 339
Target Start/End: Complemental strand, 109754 - 109584
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| ||||| || ||||| ||  || | ||||| ||| |||| ||||||||||| || ||| ||| |||||| |||||||| |||||||||||      
T  109754 tttgtggttgtgtttattgatgacatcgtgatttattctaagactgaagaagagcatgcagaacatctgaagattgtattgcaagtattgaaagagaaga 109655  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |||||| |||||| ||||| || || ||||| ||||| |  ||||| ||||| ||||| ||| | ||||||    
T  109654 agttgtatgccaaattgtcaaaatgcgagttctggttaagtgaagtaagttttcttggccatattatttct 109584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 109 - 339
Target Start/End: Original strand, 217542 - 217772
Alignment:
Q  109 aatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 208  Q
    ||||| |||||||| |||||||| || ||||||   || |||||| | | | | || ||||| ||||| ||| |||| |||||||||||| | || || |    
T  217542 aatgccccaggtgtgtttatggagtacatgaatcatatttttcatgcgttttttgatcgtttcgtggttgtgatcattgatgatattttgatatactcga 217641  T
Q  209 agtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaa 308  Q
    |||  || ||||| |||| ||||||||||| |||||| ||||||||  ||||||||||  || | | ||  || ||||| ||||||||||| | ||||||    
T  217642 agttcgaagaagaacatgttgagcatttgaagattgttttgcaagtgctgaaagagaagaagctatatgttaaattgtcaaagtgtgagttctagttgaa 217741  T
Q  309 ggaagtgagtttccttggtcatgtgatttct 339  Q
     || |||||||| ||||| || || ||||||    
T  217742 tgaggtgagttttcttggccacgttatttct 217772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1477 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1477
Description:

Target: scaffold1477; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 305
Target Start/End: Complemental strand, 308 - 215
Alignment:
Q  212 ctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggtt 305  Q
    |||| ||||||||||| || ||| ||| |||||| |||||||| |||||||| ||  |||||| |||||||||||| |||||||| || |||||    
T  308 ctgaagaagagcatgcagaacatctgaagattgtattgcaagtattgaaagaaaagaagttgtatgccaagttgtcaaagtgtgatttctggtt 215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1288 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1288
Description:

Target: scaffold1288; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 326
Target Start/End: Original strand, 1084 - 1193
Alignment:
Q  217 gaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtga 316  Q
    |||||| |||| || ||| ||| |||||| |||||||| || || |||||  |||||| |||||||||||| |||||||| |||||||| |  |||||||    
T  1084 gaagagaatgcagaacatctgaagattgtattgcaagtattaaaggagaagaagttgtatgccaagttgtcgaagtgtgaattttggttaagtgaagtga 1183  T
Q  317 gtttccttgg 326  Q
    |||| |||||    
T  1184 gttttcttgg 1193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 305
Target Start/End: Original strand, 9702 - 9775
Alignment:
Q  232 catttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggtt 305  Q
    ||||||| ||||||||||||| | |||||||||||  |||||| ||| |||||||| ||||||||||| |||||    
T  9702 catttgaagattgtgttgcaaattttgaaagagaaaaagttgtatgctaagttgtcgaagtgtgagttctggtt 9775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 305
Target Start/End: Original strand, 19916 - 19989
Alignment:
Q  232 catttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggtt 305  Q
    ||||||| ||||||||||||| | |||||||||||  |||||| ||| |||||||| ||||||||||| |||||    
T  19916 catttgaagattgtgttgcaaattttgaaagagaaaaagttgtatgctaagttgtcgaagtgtgagttctggtt 19989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 339
Target Start/End: Original strand, 28774 - 28923
Alignment:
Q  190 gatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtcta 289  Q
    ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||| || || ||||    
T  28774 gatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattatcta 28873  T
Q  290 agtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    ||||| |||| |||||||| || || ||||| ||||| ||||| ||||||    
T  28874 agtgtaagttatggttgaaagaggtaagttttcttggccatgttatttct 28923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 161 - 266
Target Start/End: Original strand, 28637 - 28742
Alignment:
Q  161 tggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaa 260  Q
    |||| ||||| ||||| || || || || ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||    
T  28637 tggatcgtttcgtggttgtttttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaa 28736  T
Q  261 agagaa 266  Q
    ||||||    
T  28737 agagaa 28742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 339
Target Start/End: Original strand, 3556 - 3705
Alignment:
Q  190 gatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtcta 289  Q
    ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||| | |||||||| |||||||||||  |  | | ||| || || ||||    
T  3556 gatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattatcttgcaagtgttgaaagagaagaaactttatgctaaattatcta 3655  T
Q  290 agtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |||||||||| |||||||| || || ||||| ||||| ||||| ||||||    
T  3656 agtgtgagttctggttgaaagaggtaagttttcttggccatgttatttct 3705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 326
Target Start/End: Original strand, 80013 - 80170
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||| || ||||| |||||||||||  | ||||| ||| |||| || ||||||||  ||||| |||||||||| || || || |||||||| ||      
T  80013 tttgtggtagtattcattgatgatattttaatttattctaagactgaagaggagcatgcaaagcatctgaggattgtattacaggttttgaaagaaaaga 80112  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttgg 326  Q
    |||||| ||| || ||||| || || ||||||||||| |  ||||| |||||||||||    
T  80113 agttgtatgctaaattgtcaaaatgcgagttttggttaagtgaagtaagtttccttgg 80170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 320
Target Start/End: Original strand, 99682 - 99895
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||||||||| ||||| || ||||| || |||||| |||| || ||| | ||||||||    |||||||| ||||| || ||||| ||| || | |||||    
T  99682 ctaatgcgcctggtgtgttcatggagtatatgaatcgaattttccatgcctatctggataaatttgtggttgtgtttattgatgacattctgatctattc 99781  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     |   |||| ||||||||||| || ||| ||| ||||||||||||| |  | ||||||||  |||| | ||| |||||||| ||||||||||| |||||     
T  99782 tagaactgaagaagagcatgcagaacatctgaagattgtgttgcaaattctaaaagagaaaaagttatatgctaagttgtcgaagtgtgagttctggtta 99881  T
Q  307 aaggaagtgagttt 320  Q
    |  |||||||||||    
T  99882 agtgaagtgagttt 99895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1646 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold1646
Description:

Target: scaffold1646; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 107 - 339
Target Start/End: Complemental strand, 1510 - 1278
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    |||| ||||| ||||| || ||||| || |||||  |||| |||||| ||| ||||||    || ||||| || ||||| |||||||||||  | |||||    
T  1510 ctaacgcgcctggtgtgttcatggagtatatgaaccgaatttttcatgcttttctggataaattcgtggtagtattcattgatgatattttaatttattc 1411  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
     ||| |||| || |||||||| || ||| |||||||||| || || || |||||||| ||  |||||| ||| || ||||| || || |||||||||||     
T  1410 taagactgaagaggagcatgcagaacatctgaggattgtattacaggttttgaaagaaaagaagttgtatgctaaattgtcaaaatgcgagttttggtta 1311  T
Q  307 aaggaagtgagtttccttggtcatgtgatttct 339  Q
    |  ||||| ||||||||||| ||| | ||||||    
T  1310 agtgaagtaagtttccttggccatattatttct 1278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 217 - 337
Target Start/End: Complemental strand, 4270 - 4150
Alignment:
Q  217 gaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtga 316  Q
    ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||| || || |||||||||||||| |||||||| || || |    
T  4270 gaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattatctaagtgtgagttctggttgaaagaggtaa 4171  T
Q  317 gtttccttggtcatgtgattt 337  Q
    |||| ||||| ||||| ||||    
T  4170 gttttcttggccatgttattt 4150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 187 - 331
Target Start/End: Complemental strand, 20344 - 20200
Alignment:
Q  187 gatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 286  Q
    |||||||||||| | || || ||| |||| ||||| |||||||||||||||| | | || |||||||| |||||||||||  |  | | ||| || ||||    
T  20344 gatgatattttgatttactccaagactgaagaagaacatgctgagcatttgaagttggttttgcaagtgttgaaagagaagaaactttatgctaaattgt 20245  T
Q  287 ctaagtgtgagttttggttgaaggaagtgagtttccttggtcatg 331  Q
    |||||||||| || |||||||| ||| |||| || ||||| ||||    
T  20244 ctaagtgtgaattctggttgaaagaattgagctttcttggacatg 20200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 304
Target Start/End: Complemental strand, 769 - 634
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    |||||||||||||| || ||||| ||| |  | ||||| ||| |||| || |||||||| || ||| ||| |||||| |||||||| |||||||| ||      
T  769 tttgtggtggtgtttattgatgacattctaatttattctaagactgaagaggagcatgcagaacatctgaagattgtattgcaagtgttgaaagaaaaga 670  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggt 304  Q
    |||||| ||| || ||||| || |||||||||||||    
T  669 agttgtatgctaaattgtcgaaatgtgagttttggt 634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 327
Target Start/End: Original strand, 34682 - 34741
Alignment:
Q  268 cagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggt 327  Q
    ||||||||||| |||| ||| ||||| |||||||||||| | ||||||||||||||||||    
T  34682 cagttgtgtgctaagtagtcgaagtgcgagttttggttgcaagaagtgagtttccttggt 34741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 350
Target Start/End: Complemental strand, 4517 - 4423
Alignment:
Q  256 ttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtat 350  Q
    ||||| |||||  |||||| ||| |||| ||| |||||||||||||||||| |  |||||||||| |||  |||||||||||| ||| |||||||    
T  4517 ttgaaggagaagaagttgtttgctaagtcgtcaaagtgtgagttttggttgcaaaaagtgagttttcttaatcatgtgatttcgaagagtggtat 4423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 13649 - 13707
Alignment:
Q  11 atcatcagattagggtgaaggcggaggatatatccaaaactgcgttccgaacgaggtat 69  Q
    ||||||||||||  ||||||||  | |||||||||||||| ||||||||||||||||||    
T  13649 atcatcagattacagtgaaggcaaaagatatatccaaaaccgcgttccgaacgaggtat 13707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 326
Target Start/End: Complemental strand, 36166 - 36080
Alignment:
Q  240 gattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttgg 326  Q
    |||||| |||||||| |||||||| ||  |||||| |||||||||||| ||||||||||| ||||| |  ||||| ||||| |||||    
T  36166 gattgtattgcaagtattgaaagaaaagaagttgtatgccaagttgtcaaagtgtgagttctggttaagtgaagtaagttttcttgg 36080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 320
Target Start/End: Original strand, 56062 - 56180
Alignment:
Q  202 tattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtttt 301  Q
    ||||| ||| |||| || |||||||| || ||| |||||||||| ||||||||  ||||||||||  |||||| ||| |||||||| || ||||| || |    
T  56062 tattccaagactgaagaggagcatgcagaacatctgaggattgtattgcaagtactgaaagagaaaaagttgtatgctaagttgtcgaaatgtgaattct 56161  T
Q  302 ggttgaaggaagtgagttt 320  Q
    |||| |  |||||||||||    
T  56162 ggttaagtgaagtgagttt 56180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 326
Target Start/End: Complemental strand, 262297 - 262191
Alignment:
Q  220 gagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtt 319  Q
    |||||||| || ||| |||||||||| ||||||||  ||||||||||  |||||| ||| |||||||| || ||||| || ||||| |  ||||||||||    
T  262297 gagcatgcagaacatctgaggattgtattgcaagtactgaaagagaaaaagttgtatgctaagttgtcgaaatgtgaattctggttaagtgaagtgagtt 262198  T
Q  320 tccttgg 326  Q
    | |||||    
T  262197 ttcttgg 262191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 326
Target Start/End: Complemental strand, 195313 - 195207
Alignment:
Q  220 gagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtt 319  Q
    |||||||| || ||| |||||||||| ||||||||  ||||||||||  |||||| ||| |||||||| || ||||| || ||||| |  ||||||||||    
T  195313 gagcatgcagaacatctgaggattgtattgcaagtactgaaagagaaaaagttgtatgctaagttgtcgaaatgtgaattctggttaagtgaagtgagtt 195214  T
Q  320 tccttgg 326  Q
    | |||||    
T  195213 ttcttgg 195207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 339
Target Start/End: Original strand, 7896 - 8045
Alignment:
Q  190 gatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtcta 289  Q
    ||||||||| | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||||||  |  | | ||| ||  | ||||    
T  7896 gatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaactatcta 7995  T
Q  290 agtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    |||||||||| |||||||| || || ||||| ||||  ||||| ||||||    
T  7996 agtgtgagttctggttgaaagaggtaagttttcttgcccatgttatttct 8045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 339
Target Start/End: Original strand, 4587 - 4688
Alignment:
Q  238 aggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgattt 337  Q
    |||||||| || || || |||||||| ||  |||||| |||||| ||||| || |||||||||||||| |  ||||| ||||||||||||||| | ||||    
T  4587 aggattgtattacaggttttgaaagaaaagaagttgtatgccaaattgtcaaaatgtgagttttggttaagtgaagtaagtttccttggtcatattattt 4686  T
Q  338 ct 339  Q
    ||    
T  4687 ct 4688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2111 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold2111
Description:

Target: scaffold2111; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 339
Target Start/End: Original strand, 707 - 939
Alignment:
Q  107 ctaatgcgccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 206  Q
    ||||||| || ||||| || ||||| || ||||||||||| |||||| |||| || ||    |||||||| || ||||| ||||| |||||  | |||||    
T  707 ctaatgcacctggtgtgttcatggagtatatgaatagaatttttcatgcttacctagataaatttgtggttgtattcattgatgacatttttatctattc 806  T
Q  207 aaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 306  Q
    ||   | ||||||||||| || || ||   || ||||||||||||  | |||||||||||  |||||| ||||||||| || ||||| | ||| |||||     
T  807 aagaaccgaggaagagcacgcagaacaccagaagattgtgttgcagattttgaaagagaaaaagttgtatgccaagttttcgaagtgcgggttctggtta 906  T
Q  307 aaggaagtgagtttccttggtcatgtgatttct 339  Q
    | |||||||| ||| ||||| ||| | ||||||    
T  907 agggaagtgaattttcttggccatattatttct 939  T

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Target: scaffold0739 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0739
Description:

Target: scaffold0739; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 339
Target Start/End: Complemental strand, 1158 - 1006
Alignment:
Q  187 gatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 286  Q
    ||||||||| || | || || ||| |||| ||||| |||||||||||| ||| |||||| |||||||| |||||||| ||  |  | | ||| ||  | |    
T  1158 gatgatattctgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagaaaagaaactttatgctaaactat 1059  T
Q  287 ctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    ||||||||||||| |||||||| || || ||||| ||||| ||||| ||||||    
T  1058 ctaagtgtgagttctggttgaaagaggtaagttttcttggccatgttatttct 1006  T

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Target: scaffold0009 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 329
Target Start/End: Complemental strand, 250744 - 250584
Alignment:
Q  169 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaacc 268  Q
    ||||| || ||||| || ||||| || ||| | ||||| ||| |||| || |||||||| |||||| ||| |||||| |||||||| ||||| || ||      
T  250744 tttgttgttgtgtttattgatgacatcttgatttattctaagactgaagaggagcatgcagagcatctgaagattgtattgcaagtgttgaaggaaaaga 250645  T
Q  269 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtca 329  Q
     ||||| ||| |||||||| || |||||||| ||||| |  ||||||||||| || |||||    
T  250644 ggttgtatgctaagttgtcgaaatgtgagttctggttaagtgaagtgagttttctgggtca 250584  T

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Target: scaffold0278 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 188 - 339
Target Start/End: Complemental strand, 555 - 405
Alignment:
Q  188 atgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtc 287  Q
    ||||||||||| | || || |||||||| ||||| |||  ||||||||||| | | || |||||||| |||||||||||  |  | | ||| ||||| ||    
T  555 atgatattttgatttactctaagtctgaagaagaacata-tgagcatttgaagctggttttgcaagtgttgaaagagaagaaactttatgcgaagttatc 457  T
Q  288 taagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 339  Q
    ||| ||||| ||||||||||| || || ||||| ||||| ||||| ||||||    
T  456 taactgtgaattttggttgaaagaggtaagttttcttggccatgttatttct 405  T

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Target: scaffold0106 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 172 - 299
Target Start/End: Complemental strand, 33455 - 33328
Alignment:
Q  172 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 271  Q
    ||||| |||||||| ||||| || ||| | ||||| ||| |||| ||||||||||| || ||| | | |||||| || || || |||||||||||  |||    
T  33455 gtggttgtgttcattgatgacatcttgatttattctaagactgaagaagagcatgcagaacatctaaagattgtattacaggtgttgaaagagaagaagt 33356  T
Q  272 tgtgtgccaagttgtctaagtgtgagtt 299  Q
    ||| |||||||||||  || ||||||||    
T  33355 tgtatgccaagttgttaaaatgtgagtt 33328  T

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Target: scaffold0088 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 305
Target Start/End: Complemental strand, 29007 - 28921
Alignment:
Q  219 agagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggtt 305  Q
    ||||||||| |||||  |||| |||||||||||||| |||||||| ||   ||||| ||| |||||||| || |||||||| |||||    
T  29007 agagcatgcagagcacctgagaattgtgttgcaagttttgaaagaaaagaggttgtatgcgaagttgtcaaaatgtgagttctggtt 28921  T

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Target: scaffold0827 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0827
Description:

Target: scaffold0827; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 140
Target Start/End: Complemental strand, 5332 - 5259
Alignment:
Q  67 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaataaatgaa 140  Q
    ||||| || ||||||||||| |||||||| |||||||| || || |||||||| || |||||||| || |||||    
T  5332 tatggtcattatgagtattcggtgatgccttttggagtgtccaacgcgccaggagtgtttatggagtatatgaa 5259  T

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Target: scaffold0682 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0682
Description:

Target: scaffold0682; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 320
Target Start/End: Complemental strand, 1936 - 1856
Alignment:
Q  240 gattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagttt 320  Q
    ||||||||||||  | ||||||||||   |||||| |||||||||||| ||||| ||||| ||||| |  |||||||||||    
T  1936 gattgtgttgcagattttgaaagagagaaagttgtatgccaagttgtcgaagtgcgagttctggttaagtgaagtgagttt 1856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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