View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0759_low_60 (Length: 311)
Name: NF0759_low_60
Description: NF0759
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0759_low_60 |
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Alignment Details
Target: chr7 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 13935576 - 13935656
Alignment:
| Q |
7 |
cactccacaaattttcttcttcaccataaaactcccttcctccatagtcattcaccctattctcagaaccaaatcaaaaat |
87 |
Q |
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| T |
13935576 |
cactccacaaattttcttcttcaccataaaactcccttcctccatagtcattcaccctattctcagaaccaaatcaaaaat |
13935656 |
T |
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Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 251
Target Start/End: Original strand, 26934160 - 26934236
Alignment:
| Q |
175 |
aatcatgaactttagtttcctttaatatagtcaggactttgaggaaattttcaaacatctccatcccaaggttcttc |
251 |
Q |
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| T |
26934160 |
aatcatgaactttattttcctacaacatagttaggactttgaggaaattttcaaacatctccatcccaaagttcttc |
26934236 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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