View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0759_low_86 (Length: 270)

Name: NF0759_low_86
Description: NF0759
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0759_low_86
NF0759_low_86
[»] chr6 (54 HSPs)
chr6 (1-117)||(25754836-25754952)
chr6 (1-117)||(18456746-18456862)
chr6 (1-117)||(18461906-18462022)
chr6 (1-117)||(26924659-26924775)
chr6 (1-117)||(8055056-8055172)
chr6 (1-117)||(12742344-12742460)
chr6 (1-117)||(18334611-18334727)
chr6 (1-117)||(19005073-19005189)
chr6 (1-117)||(19858938-19859054)
chr6 (1-117)||(22782254-22782370)
chr6 (1-117)||(24422574-24422690)
chr6 (1-117)||(30676729-30676845)
chr6 (1-117)||(33861821-33861937)
chr6 (1-117)||(33864305-33864421)
chr6 (1-117)||(1540930-1541046)
chr6 (1-117)||(2291199-2291315)
chr6 (1-117)||(34963400-34963516)
chr6 (1-117)||(1595576-1595692)
chr6 (1-117)||(3852036-3852152)
chr6 (1-116)||(25688529-25688644)
chr6 (1-117)||(16448545-16448662)
chr6 (1-116)||(25656656-25656771)
chr6 (1-117)||(20556913-20557027)
chr6 (1-117)||(29060570-29060687)
chr6 (1-96)||(20593803-20593899)
chr6 (1-117)||(17287770-17287887)
chr6 (1-93)||(18409825-18409918)
chr6 (1-117)||(25629329-25629446)
chr6 (1-96)||(19303536-19303631)
chr6 (1-85)||(16496274-16496359)
chr6 (1-117)||(20360934-20361051)
chr6 (1-83)||(20076730-20076812)
chr6 (1-70)||(18821866-18821935)
chr6 (211-266)||(18456956-18457011)
chr6 (1-76)||(20638298-20638374)
chr6 (211-270)||(25644563-25644622)
chr6 (1-117)||(25644350-25644468)
chr6 (1-117)||(22780201-22780318)
chr6 (1-117)||(20109168-20109285)
chr6 (1-85)||(19668401-19668488)
chr6 (208-257)||(20638117-20638166)
chr6 (211-254)||(17287633-17287676)
chr6 (211-266)||(18696728-18696783)
chr6 (211-266)||(20224184-20224239)
chr6 (211-266)||(22118168-22118223)
chr6 (1-32)||(25714447-25714478)
chr6 (211-257)||(18821653-18821699)
chr6 (211-261)||(19303371-19303421)
chr6 (211-261)||(20594014-20594064)
chr6 (216-258)||(22831748-22831790)
chr6 (211-261)||(25629185-25629235)
chr6 (212-265)||(18706548-18706601)
chr6 (207-248)||(27325278-27325319)
chr6 (233-266)||(33443308-33443341)
[»] scaffold0142 (2 HSPs)
scaffold0142 (1-117)||(16811-16927)
scaffold0142 (214-266)||(17024-17076)
[»] scaffold0037 (2 HSPs)
scaffold0037 (1-117)||(82099-82215)
scaffold0037 (207-252)||(80172-80217)
[»] chr4 (68 HSPs)
chr4 (1-117)||(23803284-23803400)
chr4 (1-117)||(51463887-51464003)
chr4 (1-117)||(18215293-18215409)
chr4 (1-117)||(12326-12442)
chr4 (1-117)||(15118371-15118487)
chr4 (1-117)||(52312537-52312653)
chr4 (1-117)||(1837528-1837644)
chr4 (1-117)||(3515034-3515150)
chr4 (1-117)||(18239438-18239554)
chr4 (1-117)||(19242726-19242842)
chr4 (1-117)||(19618191-19618307)
chr4 (1-117)||(44102241-44102357)
chr4 (1-117)||(44615315-44615431)
chr4 (1-117)||(44773106-44773222)
chr4 (1-117)||(50222358-50222474)
chr4 (1-116)||(14970727-14970842)
chr4 (1-117)||(15355343-15355460)
chr4 (1-117)||(12610977-12611086)
chr4 (4-117)||(21815604-21815717)
chr4 (1-117)||(44928898-44929015)
chr4 (1-111)||(15367720-15367831)
chr4 (1-111)||(15370048-15370159)
chr4 (1-111)||(15402733-15402844)
chr4 (1-111)||(15371232-15371343)
chr4 (1-111)||(15373513-15373624)
chr4 (1-111)||(16223562-16223673)
chr4 (1-117)||(7641211-7641317)
chr4 (1-92)||(14280343-14280434)
chr4 (1-96)||(14038678-14038774)
chr4 (1-92)||(54798753-54798845)
chr4 (16-117)||(20149871-20149973)
chr4 (1-117)||(16377497-16377612)
chr4 (1-117)||(7088907-7089024)
chr4 (1-117)||(7798804-7798921)
chr4 (1-117)||(12902787-12902904)
chr4 (1-83)||(52873375-52873458)
chr4 (1-117)||(7893733-7893850)
chr4 (213-270)||(44928744-44928801)
chr4 (1-92)||(8574868-8574958)
chr4 (207-266)||(44102447-44102506)
chr4 (1-117)||(22636465-22636582)
chr4 (1-117)||(44052859-44052976)
chr4 (1-117)||(16270210-16270326)
chr4 (1-85)||(23374365-23374450)
chr4 (211-266)||(21815456-21815511)
chr4 (211-270)||(52243014-52243073)
chr4 (47-117)||(22353910-22353980)
chr4 (1-117)||(6899921-6900037)
chr4 (1-85)||(16239976-16240060)
chr4 (1-56)||(3096323-3096379)
chr4 (1-117)||(13825-13942)
chr4 (220-266)||(21815127-21815173)
chr4 (220-266)||(21818549-21818595)
chr4 (45-114)||(15464908-15464977)
chr4 (207-270)||(15868531-15868594)
chr4 (212-266)||(15464755-15464809)
chr4 (207-257)||(44053066-44053116)
chr4 (207-252)||(20157130-20157175)
chr4 (207-252)||(24028977-24029022)
chr4 (211-266)||(17333521-17333576)
chr4 (207-249)||(13812652-13812694)
chr4 (211-261)||(14038889-14038939)
chr4 (211-261)||(16239800-16239850)
chr4 (233-266)||(14852700-14852733)
chr4 (207-252)||(22634053-22634098)
chr4 (1-85)||(17046517-17046600)
chr4 (214-254)||(17047909-17047949)
chr4 (211-255)||(22636675-22636719)
[»] chr3 (79 HSPs)
chr3 (1-117)||(50242849-50242965)
chr3 (1-117)||(7781366-7781482)
chr3 (1-117)||(29172602-29172718)
chr3 (1-117)||(8899121-8899237)
chr3 (1-117)||(9707626-9707742)
chr3 (1-117)||(17463205-17463321)
chr3 (1-117)||(28848630-28848746)
chr3 (1-117)||(34159353-34159469)
chr3 (1-117)||(38961910-38962026)
chr3 (1-117)||(45606926-45607042)
chr3 (1-117)||(55476518-55476634)
chr3 (1-117)||(12567587-12567703)
chr3 (1-117)||(13544052-13544168)
chr3 (1-117)||(16454300-16454416)
chr3 (1-117)||(17446674-17446790)
chr3 (1-117)||(17672653-17672769)
chr3 (1-117)||(13151809-13151926)
chr3 (1-117)||(13154274-13154391)
chr3 (1-117)||(6469153-6469269)
chr3 (1-117)||(10247742-10247858)
chr3 (1-117)||(16282830-16282946)
chr3 (1-105)||(15977542-15977646)
chr3 (1-117)||(53070672-53070788)
chr3 (1-117)||(41123917-41124030)
chr3 (1-107)||(15412456-15412563)
chr3 (1-117)||(14972884-14973001)
chr3 (1-117)||(43550497-43550614)
chr3 (1-107)||(8499545-8499652)
chr3 (1-107)||(12119753-12119860)
chr3 (1-85)||(55500969-55501053)
chr3 (1-117)||(25476359-25476476)
chr3 (1-92)||(36166625-36166715)
chr3 (1-96)||(40213716-40213811)
chr3 (1-92)||(21618476-21618566)
chr3 (1-83)||(44494836-44494918)
chr3 (1-85)||(12399239-12399324)
chr3 (1-97)||(42386440-42386537)
chr3 (1-117)||(17487886-17488003)
chr3 (1-117)||(17499368-17499485)
chr3 (1-85)||(18438564-18438649)
chr3 (1-117)||(43840962-43841079)
chr3 (1-76)||(10557012-10557087)
chr3 (1-83)||(26686917-26687000)
chr3 (211-266)||(53070523-53070578)
chr3 (1-117)||(13442304-13442421)
chr3 (1-117)||(20698409-20698526)
chr3 (1-85)||(23083367-23083452)
chr3 (1-85)||(24153215-24153299)
chr3 (211-270)||(17248107-17248166)
chr3 (207-270)||(23274925-23274988)
chr3 (211-270)||(52523548-52523607)
chr3 (1-72)||(17737263-17737337)
chr3 (1-83)||(11424768-11424850)
chr3 (1-70)||(14572619-14572688)
chr3 (217-270)||(2051020-2051073)
chr3 (9-117)||(14576807-14576915)
chr3 (211-266)||(42386652-42386707)
chr3 (211-261)||(14576663-14576713)
chr3 (1-117)||(24340697-24340814)
chr3 (52-117)||(2051173-2051238)
chr3 (1-117)||(52523701-52523820)
chr3 (1-115)||(23274717-23274832)
chr3 (213-261)||(25476215-25476263)
chr3 (211-261)||(14572829-14572879)
chr3 (207-257)||(17488093-17488143)
chr3 (207-257)||(17499575-17499625)
chr3 (211-261)||(40213551-40213601)
chr3 (209-257)||(13442513-13442561)
chr3 (214-249)||(12339995-12340030)
chr3 (207-250)||(14668996-14669039)
chr3 (211-261)||(11424593-11424643)
chr3 (211-261)||(18438775-18438825)
chr3 (207-257)||(20698270-20698320)
chr3 (207-252)||(4588628-4588673)
chr3 (207-252)||(14665841-14665886)
chr3 (207-252)||(14735354-14735399)
chr3 (233-266)||(16839497-16839530)
chr3 (52-92)||(37251165-37251205)
chr3 (52-92)||(43926042-43926082)
[»] chr8 (65 HSPs)
chr8 (1-117)||(14409463-14409579)
chr8 (1-117)||(16413335-16413451)
chr8 (1-117)||(41598215-41598331)
chr8 (1-117)||(1484429-1484545)
chr8 (1-117)||(5853311-5853427)
chr8 (1-117)||(20046214-20046330)
chr8 (1-117)||(20403254-20403370)
chr8 (1-117)||(22001780-22001896)
chr8 (1-117)||(15203250-15203366)
chr8 (1-117)||(4483308-4483423)
chr8 (1-117)||(4542392-4542508)
chr8 (1-117)||(14823800-14823916)
chr8 (1-117)||(19896292-19896411)
chr8 (1-117)||(19801401-19801516)
chr8 (1-107)||(15070585-15070692)
chr8 (4-117)||(25484294-25484400)
chr8 (1-117)||(45290713-45290830)
chr8 (1-92)||(16092341-16092433)
chr8 (1-111)||(19937030-19937141)
chr8 (2-117)||(26223947-26224062)
chr8 (1-83)||(6759288-6759371)
chr8 (1-117)||(7372808-7372925)
chr8 (1-85)||(21919006-21919091)
chr8 (1-117)||(28649018-28649135)
chr8 (1-92)||(26219744-26219834)
chr8 (1-117)||(18818383-18818500)
chr8 (1-117)||(20536238-20536355)
chr8 (1-117)||(22626766-22626882)
chr8 (1-83)||(23406409-23406492)
chr8 (211-270)||(41598425-41598484)
chr8 (1-117)||(21923902-21924019)
chr8 (1-117)||(22875095-22875211)
chr8 (1-92)||(26225292-26225382)
chr8 (211-266)||(19801252-19801307)
chr8 (207-270)||(13507905-13507968)
chr8 (207-270)||(13597437-13597500)
chr8 (1-70)||(31971287-31971356)
chr8 (1-117)||(18879210-18879322)
chr8 (1-70)||(45131019-45131087)
chr8 (211-261)||(28648874-28648924)
chr8 (213-266)||(40492677-40492730)
chr8 (211-266)||(22963244-22963299)
chr8 (47-117)||(13508059-13508129)
chr8 (1-117)||(13597591-13597708)
chr8 (211-261)||(22626976-22627026)
chr8 (1-92)||(21285627-21285719)
chr8 (214-266)||(16799732-16799784)
chr8 (45-117)||(20498637-20498709)
chr8 (1-85)||(21389458-21389541)
chr8 (1-85)||(21778784-21778867)
chr8 (211-266)||(14103049-14103104)
chr8 (212-267)||(19154709-19154764)
chr8 (211-266)||(20533233-20533288)
chr8 (211-266)||(23668050-23668105)
chr8 (211-261)||(16092171-16092221)
chr8 (207-257)||(18879071-18879121)
chr8 (211-261)||(23648794-23648844)
chr8 (233-266)||(17439330-17439363)
chr8 (233-266)||(22525779-22525812)
chr8 (211-255)||(7373011-7373055)
chr8 (1-70)||(16199666-16199735)
chr8 (52-92)||(17266991-17267031)
chr8 (52-92)||(17439504-17439544)
chr8 (52-92)||(37116431-37116471)
chr8 (52-92)||(40492850-40492890)
[»] chr7 (59 HSPs)
chr7 (1-117)||(24275198-24275314)
chr7 (1-117)||(456348-456464)
chr7 (1-117)||(11393306-11393422)
chr7 (1-117)||(11972523-11972639)
chr7 (1-117)||(14949141-14949257)
chr7 (1-117)||(15376732-15376848)
chr7 (1-117)||(16232547-16232663)
chr7 (1-117)||(18640299-18640415)
chr7 (1-117)||(20385142-20385258)
chr7 (1-117)||(21189614-21189730)
chr7 (1-117)||(27216887-27217003)
chr7 (1-117)||(32125518-32125634)
chr7 (1-117)||(41522944-41523060)
chr7 (1-117)||(41525406-41525522)
chr7 (1-116)||(3386360-3386475)
chr7 (1-116)||(16410086-16410201)
chr7 (1-117)||(24702265-24702381)
chr7 (1-117)||(16213711-16213827)
chr7 (1-117)||(44116536-44116652)
chr7 (1-117)||(13647355-13647472)
chr7 (1-117)||(18430739-18430855)
chr7 (1-117)||(24704715-24704828)
chr7 (1-97)||(13869373-13869470)
chr7 (1-117)||(17061934-17062050)
chr7 (5-117)||(12756690-12756802)
chr7 (1-97)||(13831400-13831496)
chr7 (1-117)||(38898395-38898512)
chr7 (3-93)||(48273421-48273512)
chr7 (1-117)||(20110583-20110689)
chr7 (37-117)||(26356002-26356082)
chr7 (37-117)||(26358454-26358534)
chr7 (1-117)||(3564338-3564455)
chr7 (211-266)||(12756541-12756596)
chr7 (211-270)||(17061781-17061840)
chr7 (1-117)||(12698861-12698979)
chr7 (1-117)||(9509219-9509336)
chr7 (1-85)||(10589069-10589154)
chr7 (1-85)||(38227511-38227595)
chr7 (211-270)||(2279939-2279998)
chr7 (1-117)||(18456387-18456503)
chr7 (9-85)||(26212034-26212111)
chr7 (45-116)||(2280094-2280165)
chr7 (218-270)||(12255612-12255664)
chr7 (1-92)||(15144037-15144128)
chr7 (211-263)||(44116746-44116798)
chr7 (207-252)||(9751390-9751435)
chr7 (214-266)||(15008323-15008375)
chr7 (2-92)||(22072944-22073036)
chr7 (211-266)||(9033170-9033225)
chr7 (211-266)||(14036439-14036494)
chr7 (211-266)||(14044989-14045044)
chr7 (211-266)||(14346469-14346524)
chr7 (211-266)||(14355019-14355074)
chr7 (211-261)||(3564194-3564244)
chr7 (207-257)||(9509426-9509476)
chr7 (46-92)||(16056403-16056449)
chr7 (211-261)||(38227721-38227771)
chr7 (233-266)||(9177490-9177523)
chr7 (4-70)||(40443424-40443490)
[»] scaffold1439 (1 HSPs)
scaffold1439 (3-117)||(135-249)
[»] scaffold0761 (1 HSPs)
scaffold0761 (1-117)||(4324-4440)
[»] scaffold0716 (1 HSPs)
scaffold0716 (1-117)||(4721-4837)
[»] scaffold0444 (1 HSPs)
scaffold0444 (1-117)||(13419-13535)
[»] scaffold0254 (1 HSPs)
scaffold0254 (1-117)||(20774-20890)
[»] scaffold0134 (1 HSPs)
scaffold0134 (1-117)||(37848-37964)
[»] scaffold0023 (4 HSPs)
scaffold0023 (1-117)||(17459-17575)
scaffold0023 (1-117)||(94438-94554)
scaffold0023 (1-117)||(44481-44598)
scaffold0023 (1-103)||(100404-100507)
[»] scaffold0003 (3 HSPs)
scaffold0003 (1-117)||(158469-158585)
scaffold0003 (1-117)||(339924-340038)
scaffold0003 (211-255)||(339786-339830)
[»] chr5 (57 HSPs)
chr5 (1-117)||(264787-264903)
chr5 (1-117)||(10732959-10733075)
chr5 (1-117)||(39363411-39363527)
chr5 (1-117)||(20909039-20909155)
chr5 (1-117)||(29329961-29330077)
chr5 (1-117)||(42245384-42245500)
chr5 (1-117)||(20902027-20902144)
chr5 (1-117)||(29346007-29346123)
chr5 (1-117)||(39245163-39245279)
chr5 (1-117)||(36154802-36154915)
chr5 (1-117)||(18319052-18319169)
chr5 (1-117)||(11581218-11581334)
chr5 (1-117)||(29348480-29348596)
chr5 (1-117)||(29350953-29351069)
chr5 (1-117)||(2154632-2154749)
chr5 (9-117)||(32027428-32027536)
chr5 (1-107)||(38619461-38619568)
chr5 (1-117)||(10775694-10775811)
chr5 (1-117)||(31061095-31061212)
chr5 (1-107)||(23064538-23064645)
chr5 (3-117)||(24067136-24067251)
chr5 (1-115)||(20917973-20918083)
chr5 (1-91)||(1096497-1096588)
chr5 (2-96)||(9077983-9078078)
chr5 (211-270)||(36154649-36154708)
chr5 (1-85)||(21729070-21729155)
chr5 (1-85)||(21808395-21808480)
chr5 (1-117)||(23390470-23390587)
chr5 (1-76)||(21997549-21997625)
chr5 (1-96)||(24529250-24529346)
chr5 (211-270)||(11581066-11581125)
chr5 (212-270)||(22144292-22144350)
chr5 (1-117)||(25421562-25421679)
chr5 (1-85)||(25431424-25431509)
chr5 (1-85)||(8286848-8286934)
chr5 (1-85)||(22075049-22075134)
chr5 (1-117)||(22144079-22144196)
chr5 (1-85)||(24493599-24493683)
chr5 (1-92)||(22412214-22412305)
chr5 (1-85)||(13025341-13025425)
chr5 (1-85)||(13095525-13095609)
chr5 (45-92)||(20766119-20766166)
chr5 (211-261)||(13095735-13095785)
chr5 (211-261)||(25421773-25421823)
chr5 (1-70)||(21292992-21293060)
chr5 (211-261)||(21985977-21986027)
chr5 (211-261)||(24493809-24493859)
chr5 (207-252)||(22120033-22120078)
chr5 (213-261)||(25431637-25431685)
chr5 (1-117)||(37723933-37724048)
chr5 (211-261)||(9078193-9078243)
chr5 (211-261)||(13025551-13025601)
chr5 (207-257)||(23390330-23390380)
chr5 (211-261)||(24529461-24529511)
chr5 (207-249)||(24767180-24767222)
chr5 (233-266)||(21328039-21328072)
chr5 (52-92)||(29448086-29448126)
[»] chr2 (54 HSPs)
chr2 (1-117)||(18808970-18809086)
chr2 (1-117)||(23130889-23131005)
chr2 (1-117)||(23133356-23133472)
chr2 (1-117)||(23135617-23135733)
chr2 (1-117)||(23709551-23709667)
chr2 (1-117)||(23712032-23712148)
chr2 (1-117)||(24367801-24367917)
chr2 (1-117)||(26505406-26505522)
chr2 (1-117)||(26507884-26508000)
chr2 (1-117)||(32214940-32215056)
chr2 (1-117)||(34402541-34402657)
chr2 (1-117)||(39682340-39682456)
chr2 (1-117)||(571424-571540)
chr2 (1-117)||(6726022-6726138)
chr2 (1-117)||(21155079-21155195)
chr2 (1-117)||(32039517-32039633)
chr2 (1-117)||(43137326-43137442)
chr2 (1-117)||(24898214-24898331)
chr2 (1-117)||(24900697-24900814)
chr2 (1-117)||(24903174-24903291)
chr2 (1-117)||(24905651-24905768)
chr2 (1-117)||(24908126-24908243)
chr2 (1-117)||(28577126-28577242)
chr2 (1-117)||(45029873-45029989)
chr2 (1-117)||(22105439-22105556)
chr2 (1-117)||(24529547-24529664)
chr2 (1-117)||(38967401-38967518)
chr2 (1-117)||(22337145-22337262)
chr2 (1-117)||(23060543-23060660)
chr2 (1-117)||(23076472-23076589)
chr2 (1-117)||(22731208-22731325)
chr2 (211-270)||(19672068-19672127)
chr2 (211-270)||(23708439-23708498)
chr2 (59-117)||(24642875-24642933)
chr2 (1-70)||(38136-38205)
chr2 (1-117)||(22738154-22738270)
chr2 (1-52)||(24643034-24643085)
chr2 (1-85)||(298820-298906)
chr2 (9-85)||(23660061-23660137)
chr2 (1-117)||(23285895-23286008)
chr2 (1-117)||(19671860-19671976)
chr2 (1-93)||(23103395-23103486)
chr2 (1-85)||(23654392-23654477)
chr2 (1-92)||(28406006-28406099)
chr2 (1-117)||(7707-7824)
chr2 (214-266)||(23287607-23287659)
chr2 (1-32)||(23040249-23040280)
chr2 (58-92)||(23004838-23004872)
chr2 (5-117)||(23708593-23708706)
chr2 (212-261)||(22337357-22337406)
chr2 (52-117)||(23791357-23791421)
chr2 (234-266)||(18546769-18546801)
chr2 (211-255)||(22738016-22738060)
chr2 (211-255)||(23076683-23076727)
[»] chr1 (47 HSPs)
chr1 (1-117)||(13988893-13989009)
chr1 (1-117)||(21475106-21475222)
chr1 (1-117)||(21923310-21923426)
chr1 (1-117)||(23593754-23593870)
chr1 (1-117)||(21840794-21840910)
chr1 (1-117)||(31612340-31612456)
chr1 (1-117)||(29298164-29298279)
chr1 (1-117)||(29776715-29776831)
chr1 (1-117)||(45574861-45574978)
chr1 (1-117)||(16361944-16362060)
chr1 (1-117)||(21707194-21707310)
chr1 (1-117)||(21711736-21711852)
chr1 (1-117)||(22123086-22123203)
chr1 (1-117)||(13212880-13212997)
chr1 (1-117)||(21342123-21342240)
chr1 (1-117)||(21346988-21347105)
chr1 (1-117)||(40389181-40389298)
chr1 (1-117)||(433039-433153)
chr1 (1-111)||(15860033-15860144)
chr1 (9-117)||(16275382-16275491)
chr1 (1-117)||(50210187-50210304)
chr1 (1-96)||(34509810-34509906)
chr1 (1-117)||(27250703-27250820)
chr1 (211-270)||(433248-433307)
chr1 (1-117)||(22532299-22532416)
chr1 (211-270)||(16758892-16758951)
chr1 (211-270)||(21342334-21342393)
chr1 (211-270)||(21347199-21347258)
chr1 (1-85)||(21026710-21026795)
chr1 (1-97)||(22468690-22468787)
chr1 (1-72)||(20847173-20847245)
chr1 (45-117)||(21861544-21861616)
chr1 (214-261)||(50210043-50210090)
chr1 (1-85)||(14295557-14295642)
chr1 (1-117)||(21896230-21896347)
chr1 (213-261)||(22532512-22532560)
chr1 (1-83)||(35261086-35261169)
chr1 (1-32)||(20454613-20454644)
chr1 (211-266)||(35260905-35260960)
chr1 (233-267)||(20346067-20346101)
chr1 (207-257)||(22356008-22356058)
chr1 (207-257)||(22357694-22357744)
chr1 (211-261)||(34510021-34510071)
chr1 (233-266)||(26065202-26065235)
chr1 (52-92)||(41050033-41050073)
chr1 (52-92)||(50614114-50614154)
chr1 (52-92)||(50621942-50621982)
[»] scaffold0454 (1 HSPs)
scaffold0454 (1-117)||(10800-10916)
[»] scaffold0230 (1 HSPs)
scaffold0230 (1-117)||(13974-14090)
[»] scaffold0029 (1 HSPs)
scaffold0029 (1-117)||(11315-11431)
[»] scaffold0028 (6 HSPs)
scaffold0028 (1-117)||(134238-134354)
scaffold0028 (1-117)||(136707-136823)
scaffold0028 (1-117)||(139176-139292)
scaffold0028 (1-117)||(144114-144230)
scaffold0028 (1-117)||(141645-141761)
scaffold0028 (1-96)||(132688-132784)
[»] scaffold0001 (2 HSPs)
scaffold0001 (1-117)||(501111-501227)
scaffold0001 (1-117)||(85598-85715)
[»] scaffold0494 (1 HSPs)
scaffold0494 (3-117)||(12268-12382)
[»] scaffold0044 (1 HSPs)
scaffold0044 (4-117)||(40430-40543)
[»] scaffold0363 (1 HSPs)
scaffold0363 (1-117)||(9269-9385)
[»] scaffold0056 (4 HSPs)
scaffold0056 (1-117)||(79303-79419)
scaffold0056 (1-117)||(17189-17308)
scaffold0056 (211-266)||(79154-79209)
scaffold0056 (211-261)||(17045-17095)
[»] scaffold0031 (3 HSPs)
scaffold0031 (1-117)||(20398-20513)
scaffold0031 (207-266)||(20250-20309)
scaffold0031 (1-117)||(128781-128897)
[»] scaffold0149 (1 HSPs)
scaffold0149 (1-116)||(29959-30074)
[»] scaffold0145 (4 HSPs)
scaffold0145 (1-117)||(9776-9893)
scaffold0145 (1-117)||(38791-38907)
scaffold0145 (1-117)||(32972-33088)
scaffold0145 (211-261)||(39001-39051)
[»] scaffold0394 (1 HSPs)
scaffold0394 (23-117)||(12107-12201)
[»] scaffold0819 (1 HSPs)
scaffold0819 (1-117)||(4241-4358)
[»] scaffold0231 (2 HSPs)
scaffold0231 (1-117)||(22913-23029)
scaffold0231 (211-261)||(23123-23173)
[»] scaffold0101 (1 HSPs)
scaffold0101 (1-117)||(1299-1416)
[»] scaffold0122 (2 HSPs)
scaffold0122 (1-92)||(44706-44798)
scaffold0122 (1-117)||(26039-26156)
[»] scaffold0247 (2 HSPs)
scaffold0247 (4-117)||(2147-2261)
scaffold0247 (47-117)||(18001-18071)
[»] scaffold0007 (2 HSPs)
scaffold0007 (1-117)||(161108-161225)
scaffold0007 (53-117)||(164609-164674)
[»] scaffold0228 (6 HSPs)
scaffold0228 (8-117)||(4544-4654)
scaffold0228 (8-117)||(12126-12236)
scaffold0228 (8-117)||(22078-22188)
scaffold0228 (211-261)||(4748-4798)
scaffold0228 (211-261)||(12330-12380)
scaffold0228 (211-261)||(22282-22332)
[»] scaffold0908 (1 HSPs)
scaffold0908 (1-117)||(3160-3277)
[»] scaffold0217 (1 HSPs)
scaffold0217 (1-117)||(16574-16691)
[»] scaffold0193 (2 HSPs)
scaffold0193 (1-117)||(13241-13358)
scaffold0193 (207-257)||(13448-13498)
[»] scaffold0022 (2 HSPs)
scaffold0022 (1-92)||(116457-116547)
scaffold0022 (52-92)||(128968-129008)
[»] scaffold1842 (1 HSPs)
scaffold1842 (1-117)||(1022-1139)
[»] scaffold0540 (2 HSPs)
scaffold0540 (1-117)||(3125-3241)
scaffold0540 (211-255)||(2987-3031)
[»] scaffold0403 (1 HSPs)
scaffold0403 (1-85)||(4879-4964)
[»] scaffold0141 (2 HSPs)
scaffold0141 (1-117)||(39507-39623)
scaffold0141 (211-259)||(39717-39765)
[»] scaffold0049 (2 HSPs)
scaffold0049 (1-117)||(75189-75305)
scaffold0049 (211-259)||(75047-75095)
[»] scaffold0016 (3 HSPs)
scaffold0016 (1-117)||(1881-1998)
scaffold0016 (207-252)||(207359-207404)
scaffold0016 (207-257)||(2088-2138)
[»] scaffold0011 (2 HSPs)
scaffold0011 (1-117)||(51943-52060)
scaffold0011 (1-117)||(167952-168069)
[»] scaffold0327 (1 HSPs)
scaffold0327 (37-117)||(3504-3584)
[»] scaffold0012 (2 HSPs)
scaffold0012 (211-270)||(225648-225707)
scaffold0012 (45-117)||(225482-225553)
[»] scaffold0639 (2 HSPs)
scaffold0639 (1-85)||(8509-8594)
scaffold0639 (212-255)||(8717-8760)
[»] scaffold0120 (7 HSPs)
scaffold0120 (1-85)||(32963-33047)
scaffold0120 (1-85)||(45958-46042)
scaffold0120 (1-76)||(16143-16219)
scaffold0120 (213-261)||(16330-16378)
scaffold0120 (211-261)||(32789-32839)
scaffold0120 (211-261)||(46166-46216)
scaffold0120 (1-33)||(17388-17420)
[»] scaffold0046 (3 HSPs)
scaffold0046 (1-85)||(28444-28529)
scaffold0046 (211-266)||(16745-16800)
scaffold0046 (211-266)||(25905-25960)
[»] scaffold0647 (1 HSPs)
scaffold0647 (1-117)||(6095-6215)
[»] scaffold0235 (1 HSPs)
scaffold0235 (1-70)||(11464-11534)
[»] scaffold0042 (2 HSPs)
scaffold0042 (1-117)||(24276-24394)
scaffold0042 (207-257)||(24135-24185)
[»] scaffold0839 (1 HSPs)
scaffold0839 (221-270)||(1898-1947)
[»] scaffold0503 (2 HSPs)
scaffold0503 (211-264)||(12170-12223)
scaffold0503 (1-50)||(11993-12042)
[»] scaffold0292 (2 HSPs)
scaffold0292 (1-117)||(3500-3617)
scaffold0292 (1-85)||(373-457)
[»] scaffold0183 (1 HSPs)
scaffold0183 (58-117)||(13092-13151)
[»] scaffold0621 (1 HSPs)
scaffold0621 (1-117)||(8496-8613)
[»] scaffold0490 (1 HSPs)
scaffold0490 (1-117)||(1982-2099)
[»] scaffold0026 (3 HSPs)
scaffold0026 (1-117)||(25926-26042)
scaffold0026 (1-117)||(39888-40004)
scaffold0026 (211-261)||(26136-26186)
[»] scaffold0413 (2 HSPs)
scaffold0413 (211-266)||(15440-15495)
scaffold0413 (45-110)||(12643-12708)
[»] scaffold0165 (1 HSPs)
scaffold0165 (1-117)||(27723-27840)
[»] scaffold0358 (1 HSPs)
scaffold0358 (1-61)||(4742-4803)
[»] scaffold0080 (2 HSPs)
scaffold0080 (1-117)||(39943-40059)
scaffold0080 (211-254)||(40153-40196)
[»] scaffold0175 (2 HSPs)
scaffold0175 (37-117)||(13159-13239)
scaffold0175 (211-255)||(13333-13377)
[»] scaffold0021 (2 HSPs)
scaffold0021 (1-117)||(174796-174911)
scaffold0021 (207-257)||(124822-124872)
[»] scaffold0357 (4 HSPs)
scaffold0357 (211-266)||(13371-13426)
scaffold0357 (214-266)||(15924-15976)
scaffold0357 (1-117)||(16074-16191)
scaffold0357 (45-117)||(13203-13276)
[»] scaffold0121 (1 HSPs)
scaffold0121 (1-117)||(8507-8620)
[»] scaffold0074 (1 HSPs)
scaffold0074 (1-114)||(38679-38793)
[»] scaffold0427 (1 HSPs)
scaffold0427 (1-70)||(13527-13596)
[»] scaffold0114 (1 HSPs)
scaffold0114 (1-70)||(15485-15554)
[»] scaffold0075 (1 HSPs)
scaffold0075 (1-117)||(53523-53640)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-70)||(32097-32165)
[»] scaffold0130 (2 HSPs)
scaffold0130 (51-117)||(27911-27977)
scaffold0130 (211-259)||(28071-28119)
[»] scaffold0084 (1 HSPs)
scaffold0084 (211-261)||(10404-10454)
[»] scaffold2014 (1 HSPs)
scaffold2014 (1-92)||(1062-1154)
[»] scaffold0628 (1 HSPs)
scaffold0628 (1-92)||(2805-2897)
[»] scaffold0088 (1 HSPs)
scaffold0088 (7-85)||(20946-21026)
[»] scaffold0070 (1 HSPs)
scaffold0070 (213-261)||(4766-4814)
[»] scaffold0556 (1 HSPs)
scaffold0556 (45-92)||(8090-8137)
[»] scaffold0356 (1 HSPs)
scaffold0356 (211-266)||(486-541)
[»] scaffold0261 (1 HSPs)
scaffold0261 (4-85)||(15694-15776)
[»] scaffold0169 (1 HSPs)
scaffold0169 (211-266)||(29248-29303)
[»] scaffold0009 (1 HSPs)
scaffold0009 (211-266)||(85786-85841)
[»] scaffold0461 (1 HSPs)
scaffold0461 (1-117)||(11494-11611)
[»] scaffold0305 (1 HSPs)
scaffold0305 (207-257)||(20640-20690)
[»] scaffold0260 (1 HSPs)
scaffold0260 (233-267)||(8390-8424)
[»] scaffold0166 (1 HSPs)
scaffold0166 (207-249)||(9677-9719)
[»] scaffold0124 (1 HSPs)
scaffold0124 (1-117)||(38230-38347)
[»] scaffold0077 (1 HSPs)
scaffold0077 (211-265)||(55510-55564)
[»] scaffold0076 (1 HSPs)
scaffold0076 (211-265)||(24423-24477)
[»] scaffold0034 (1 HSPs)
scaffold0034 (211-257)||(51718-51764)
[»] scaffold0010 (2 HSPs)
scaffold0010 (211-265)||(60540-60594)
scaffold0010 (1-117)||(60689-60807)
[»] scaffold0507 (1 HSPs)
scaffold0507 (52-117)||(8033-8098)
[»] scaffold0347 (1 HSPs)
scaffold0347 (207-252)||(264-309)
[»] scaffold0192 (1 HSPs)
scaffold0192 (207-252)||(10146-10191)
[»] scaffold0150 (1 HSPs)
scaffold0150 (1-96)||(32128-32224)
[»] scaffold1257 (1 HSPs)
scaffold1257 (52-92)||(2217-2257)
[»] scaffold0737 (1 HSPs)
scaffold0737 (52-92)||(1795-1835)
[»] scaffold0456 (1 HSPs)
scaffold0456 (1-117)||(10399-10514)
[»] scaffold0395 (1 HSPs)
scaffold0395 (213-261)||(793-841)
[»] scaffold0351 (1 HSPs)
scaffold0351 (1-85)||(16312-16395)
[»] scaffold0309 (1 HSPs)
scaffold0309 (37-117)||(6677-6757)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-76)||(29120-29196)
[»] scaffold0006 (2 HSPs)
scaffold0006 (52-92)||(97089-97129)
scaffold0006 (52-92)||(106367-106407)


Alignment Details
Target: chr6 (Bit Score: 113; Significance: 3e-57; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 25754836 - 25754952
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  25754836 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattcac 25754935  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  25754936 atataattcaagtaatg 25754952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 18456746 - 18456862
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  18456746 tcatgcagcttagttaaataacaacagcaacacaatagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 18456845  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  18456846 atataattcaagtaatg 18456862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 18461906 - 18462022
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  18461906 tcatgcagcttagttaaataacaacagcaacacaatagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 18462005  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  18462006 atataattcaagtaatg 18462022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 26924775 - 26924659
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  26924775 tcatgcagcttagttaaataacaacagcaacacaatagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 26924676  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  26924675 atataattcaagtaatg 26924659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 8055056 - 8055172
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  8055056 tcatgcagcttagttaaataacaacagcaacacaaaagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 8055155  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  8055156 atataattcaagtaatg 8055172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 12742344 - 12742460
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  12742344 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 12742443  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  12742444 atataattcaagtaatg 12742460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 18334727 - 18334611
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  18334727 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 18334628  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  18334627 atataattcaagtaatg 18334611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 19005073 - 19005189
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  19005073 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 19005172  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  19005173 atataattcaagtaatg 19005189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 19859054 - 19858938
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  19859054 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 19858955  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  19858954 atataattcaagtaatg 19858938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 22782254 - 22782370
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  22782254 tcatgcagcttagttaaataacaacagcaacacagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 22782353  T
Q  101 atataattcaagtaatg 117  Q
    | |||||||||||||||    
T  22782354 acataattcaagtaatg 22782370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 24422574 - 24422690
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  24422574 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 24422673  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  24422674 atataattcaagtaatg 24422690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 30676845 - 30676729
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||    
T  30676845 tcatgcagcttagttaaataacaacagcaacacagcagtatacaaaaacagcatgatataataatatcaaatgcaagtcaacaacgtctcaattattcac 30676746  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  30676745 atataattcaagtaatg 30676729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 33861821 - 33861937
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  33861821 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 33861920  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  33861921 atataattcaagtaatg 33861937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 33864305 - 33864421
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  33864305 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 33864404  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  33864405 atataattcaagtaatg 33864421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 1541046 - 1540930
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||    
T  1541046 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagtatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 1540947  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  1540946 atataattcaagtaatg 1540930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 2291315 - 2291199
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  2291315 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 2291216  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  2291215 atataattcaagtaatg 2291199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 34963400 - 34963516
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  34963400 tcatgcaacttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 34963499  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  34963500 atataattcaagtaatg 34963516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 1595576 - 1595692
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    |||||||||||||||||||||||||||||||| |  |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  1595576 tcatgcagcttagttaaataacaacagcaacataacagtatacaaaaacaacatgacataataatatcaaatgcaattcaacaacgtctcaattattcac 1595675  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  1595676 atataattcaagtaatg 1595692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 3852152 - 3852036
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||| ||    
T  3852152 tcatgcagcttagtttaataacaacagcaacacaatagtatacaaaaacagcatgacatgataatataaaatgcaagtcaacaacgtctcaattattcac 3852053  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  3852052 atataattcaagtaatg 3852036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 25688529 - 25688644
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    |||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||    
T  25688529 tcatgcagcttagttaaataacaacagcaacataacagtatacaaaaacagcatgacataataatatcaactgcaagtcaacaacgtctcaattattcac 25688628  T
Q  101 atataattcaagtaat 116  Q
    ||||||||||||||||    
T  25688629 atataattcaagtaat 25688644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 16448662 - 16448545
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaa-caacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |    
T  16448662 tcatgcagcttagttaaataacaacagcgacacagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 16448563  T
Q  100 catataattcaagtaatg 117  Q
    |||||||||||| |||||    
T  16448562 catataattcaattaatg 16448545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 25656656 - 25656771
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||| ||    
T  25656656 tcatgcagcttagttaaataacaacagcaacatagcagtatacaaaaacagcatgacataataatatcaaatgcaagttaataacgtctcaattattcac 25656755  T
Q  101 atataattcaagtaat 116  Q
    ||||||||||| ||||    
T  25656756 atataattcaactaat 25656771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 20557027 - 20556913
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||  || ||    
T  20557027 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatggcataataatatcaaatgcaagtcaacaacgtctcaat--ttcac 20556930  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  20556929 atataattcaagtaatg 20556913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 29060570 - 29060687
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||||||| |||||||| |||||| |||  |    
T  29060570 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaagtataca 29060669  T
Q  100 catataattcaagtaatg 117  Q
       |||||||||||||||    
T  29060670 ttcataattcaagtaatg 29060687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 20593803 - 20593899
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattat 96  Q
    |||||||||| |||||||||| |||||||||||| | ||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  20593803 tcatgcagctcagttaaataaaaacagcaacacatgcagtatacgaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaattat 20593899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 17287887 - 17287770
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacag-tagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||| ||||| |||||| | ||| || |||| |    
T  17287887 tcatgcagcttagttaaataacaacagcaacataggtagtatacaaacacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattca 17287788  T
Q  100 catataattcaagtaatg 117  Q
      |||| |||||||||||    
T  17287787 attatacttcaagtaatg 17287770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 18409918 - 18409825
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaat 93  Q
    |||||||||| ||||||||||||||||||||||||  ||||||| |||||| ||||||||||||||||||||||||| |||||||| |||||||    
T  18409918 tcatgcagctcagttaaataacaacagcaacacaggcagtatacgaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaat 18409825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 25629446 - 25629329
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    ||||||||||||||||||| ||||||| |||||| | ||||||| ||||||||||||||||| |||||||||||||| |||||||| ||||||||||  |    
T  25629446 tcatgcagcttagttaaattacaacaggaacacatgcagtatacgaaaacagcatgacataacaatatcaaatgcaagtcaacaacatctcaattataca 25629347  T
Q  100 catataattcaagtaatg 117  Q
       |||||||||||||||    
T  25629346 ttcataattcaagtaatg 25629329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 19303631 - 19303536
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagta-gtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattat 96  Q
    |||||||||||||||||||||||||| |||||||| | |||||||||| || ||||||||||||||||||||||||| |||||||| ||||||||||    
T  19303631 tcatgcagcttagttaaataacaacaacaacacaggaagtatacaaaa-caacatgacataataatatcaaatgcaagtcaacaacatctcaattat 19303536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 16496274 - 16496359
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaac 85  Q
    |||||||||||||||||||||||||||||||| ||  ||||||||||| |||||||||||||||||||||| ||||| ||||||||    
T  16496274 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaac 16496359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 20361051 - 20360934
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||||||| ||  || ||||||||||||||||||||||||||||||| ||||| ||| |||| ||| || |||| |    
T  20361051 tcatgcagcttagttaaataacaacagcaacataggcagcatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattca 20360952  T
Q  100 catataattcaagtaatg 117  Q
     ||||  |||||||||||    
T  20360951 aatattcttcaagtaatg 20360934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 20076730 - 20076812
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaaca 83  Q
    |||||||||||||||||||||||||||||||| ||  |||| |||||| |||||||||||||||||||||||||||||||||||    
T  20076730 tcatgcagcttagttaaataacaacagcaacataggcagtaaacaaaa-cagcatgacataataatatcaaatgcaaatcaaca 20076812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 18821935 - 18821866
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaa 70  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||| ||||||||    
T  18821935 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgccataacaatatcaa 18821866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 211 - 266
Target Start/End: Original strand, 18456956 - 18457011
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18456956 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctgaacaag 18457011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 20638374 - 20638298
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaa 76  Q
    |||||||||||||||||||||||||| ||||| ||  |||||||||||||| ||||||||||||||||||| |||||    
T  20638374 tcatgcagcttagttaaataacaacaacaacataggcagtatacaaaaacaacatgacataataatatcaattgcaa 20638298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 211 - 270
Target Start/End: Original strand, 25644563 - 25644622
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 270  Q
    |||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||    
T  25644563 cccaaggttcaactctcagcaactcgtgcgacaaagatcgcaaaaacctaaacaagcatt 25644622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 25644350 - 25644468
Alignment:
Q  1 tcatgcagcttagttaaataaca-acagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattt 98  Q
    ||||||||||||||||||||||| ||||||||| ||  ||||| |||||||||| ||| |||| ||||||||||| || ||| |||| ||||||  |||     
T  25644350 tcatgcagcttagttaaataacagacagcaacataggcagtatgcaaaaacagcgtgatataacaatatcaaatgtaagtcatcaacatctcaaacattc 25644449  T
Q  99 acatataattcaagtaatg 117  Q
    | |||||||||||||||||    
T  25644450 atatataattcaagtaatg 25644468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 22780318 - 22780201
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    ||||||||||||||||||||||||||  |||| ||  | |||||||||||||| ||||||||||||||||| ||||| |||||| | ||| || |||| |    
T  22780318 tcatgcagcttagttaaataacaacaaaaacataggcaatatacaaaaacagcttgacataataatatcaattgcaagtcaacatcatcttaaatattca 22780219  T
Q  100 catataattcaagtaatg 117  Q
      |||| |||||||||||    
T  22780218 attatacttcaagtaatg 22780201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 20109168 - 20109285
Alignment:
Q  1 tcatgcagcttagttaaataacaa-cagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattt 98  Q
    |||||||||||||||||  ||||| |||||||| ||  ||||| ||||| || ||| | |||| |||||||||||||| ||| |||| |||||| ||||     
T  20109168 tcatgcagcttagttaataaacaaacagcaacataggcagtatgcaaaa-caacataatataacaatatcaaatgcaagtcatcaacatctcaaatattc 20109266  T
Q  99 acatataattcaagtaatg 117  Q
    | |||||||||||||||||    
T  20109267 atatataattcaagtaatg 20109285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 19668401 - 19668488
Alignment:
Q  1 tcatgcagcttagttaaataacaa-cagcaacacag-tagtatacaaaaacag--catgacataataatatcaaatgcaaatcaacaac 85  Q
    ||||||||||||||||| |||||| |||||||| || |||||| ||||| |||  ||||| |||| |||||||||||||||||||||||    
T  19668401 tcatgcagcttagttaattaacaaacagcaacatagatagtatgcaaaa-cagttcatgatataacaatatcaaatgcaaatcaacaac 19668488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 257
Target Start/End: Complemental strand, 20638166 - 20638117
Alignment:
Q  208 tatcccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatc 257  Q
    |||||||||||||||||||| || |||||||| |||||| ||||||||||    
T  20638166 tatcccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatc 20638117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 211 - 254
Target Start/End: Complemental strand, 17287676 - 17287633
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaa 254  Q
    |||||||||||||||||||| |||||||| |||||||| |||||    
T  17287676 cccaaggttcaactctcaacaactcgtgcaacaaagatagcaaa 17287633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 211 - 266
Target Start/End: Original strand, 18696728 - 18696783
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    ||||||| |||||||  |||  ||||||||||||||||||||||| ||||||||||    
T  18696728 cccaaggatcaactcataacatctcgtgcgacaaagatcgcaaaaccctaaacaag 18696783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 211 - 266
Target Start/End: Original strand, 20224184 - 20224239
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    ||||||| |||||||  |||  ||||||||||||||||||||||| ||||||||||    
T  20224184 cccaaggatcaactcataacatctcgtgcgacaaagatcgcaaaaccctaaacaag 20224239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 211 - 266
Target Start/End: Original strand, 22118168 - 22118223
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    ||||||| |||||||  |||  ||||||||||||||||||||||| ||||||||||    
T  22118168 cccaaggatcaactcataacatctcgtgcgacaaagatcgcaaaaccctaaacaag 22118223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 25714447 - 25714478
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaaca 32  Q
    ||||||||||||||||||||||||||||||||    
T  25714447 tcatgcagcttagttaaataacaacagcaaca 25714478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 257
Target Start/End: Complemental strand, 18821699 - 18821653
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatc 257  Q
    ||||||||||||||||| || |||||||| |||||| ||||||||||    
T  18821699 cccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatc 18821653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 261
Target Start/End: Complemental strand, 19303421 - 19303371
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 261  Q
    |||||||||||||||| | | ||| |||||||| |||||||||||||||||    
T  19303421 cccaaggttcaactcttagcaacttgtgcgacatagatcgcaaaatcctaa 19303371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 261
Target Start/End: Original strand, 20594014 - 20594064
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 261  Q
    ||||||||||||| || ||| ||| |||||||| |||||||||||||||||    
T  20594014 cccaaggttcaacccttaacaacttgtgcgacacagatcgcaaaatcctaa 20594064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 258
Target Start/End: Original strand, 22831748 - 22831790
Alignment:
Q  216 ggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcc 258  Q
    |||||||||||| |||| ||||||||||||| |||||||||||    
T  22831748 ggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc 22831790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 261
Target Start/End: Complemental strand, 25629235 - 25629185
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 261  Q
    |||||||||||||||| ||| |||||||| |||||  ||||||||||||||    
T  25629235 cccaaggttcaactcttaacaactcgtgcaacaaaagtcgcaaaatcctaa 25629185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 265
Target Start/End: Original strand, 18706548 - 18706601
Alignment:
Q  212 ccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaa 265  Q
    |||||| |||||||  |||  ||||||||||||||||||||||| |||||||||    
T  18706548 ccaaggatcaactcataacatctcgtgcgacaaagatcgcaaaaccctaaacaa 18706601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 27325319 - 27325278
Alignment:
Q  207 ctatcccaaggttcaactctcaacgactcgtgcgacaaagat 248  Q
    |||||||||||||||||||  ||| |||||||||||||||||    
T  27325319 ctatcccaaggttcaactcataacaactcgtgcgacaaagat 27325278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 266
Target Start/End: Original strand, 33443308 - 33443341
Alignment:
Q  233 ctcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    ||||||||||||||||||||||| ||||||||||    
T  33443308 ctcgtgcgacaaagatcgcaaaaccctaaacaag 33443341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 109; Significance: 7e-55; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 16811 - 16927
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  16811 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacgtctcaattatttac 16910  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  16911 atataattcaagtaatg 16927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 214 - 266
Target Start/End: Original strand, 17024 - 17076
Alignment:
Q  214 aaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  17024 aaggttcaactatcaacgactcgtgctacaaagatcgcaaaatcctaaacaag 17076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 109; Significance: 7e-55; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 82099 - 82215
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  82099 tcatgaagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattcac 82198  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  82199 atataattcaagtaatg 82215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 80217 - 80172
Alignment:
Q  207 ctatcccaaggttcaactctcaacgactcgtgcgacaaagatcgca 252  Q
    |||||||||||||||||||  ||| ||||||||||| |||||||||    
T  80217 ctatcccaaggttcaactcataacaactcgtgcgacgaagatcgca 80172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 109; Significance: 7e-55; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 23803400 - 23803284
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||    
T  23803400 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctaaattattcac 23803301  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  23803300 atataattcaagtaatg 23803284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 51464003 - 51463887
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  51464003 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattcac 51463904  T
Q  101 atataattcaagtaatg 117  Q
    ||||||||||| |||||    
T  51463903 atataattcaaataatg 51463887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 18215409 - 18215293
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  18215409 tcatgcagcttagttaaataacaacagcaacacagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 18215310  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  18215309 atataattcaagtaatg 18215293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 12442 - 12326
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  12442 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 12343  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  12342 atataattcaagtaatg 12326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 15118487 - 15118371
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  15118487 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 15118388  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  15118387 atataattcaagtaatg 15118371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 52312537 - 52312653
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  52312537 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 52312636  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  52312637 atataattcaagtaatg 52312653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 1837644 - 1837528
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||    
T  1837644 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataataccaaatgcaagtcaacaacgtctcaattattcac 1837545  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  1837544 atataattcaagtaatg 1837528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 3515034 - 3515150
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||    
T  3515034 tcatgcagcttagttaaaaaacaacagcaacacagcagtatacaaaaacagcaagacataataatatcaaatgcaagtcaacaacgtctcaattattcac 3515133  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  3515134 atataattcaagtaatg 3515150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 18239554 - 18239438
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  18239554 tcatgcagcttagttaaataacaacagcagcacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 18239455  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  18239454 atataattcaagtaatg 18239438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 19242726 - 19242842
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    |||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  19242726 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 19242825  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  19242826 atataattcaagtaatg 19242842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 19618307 - 19618191
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  19618307 tcatgcagcttagttaaataacaacagcaacacagcagtatacaaaaacatcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 19618208  T
Q  101 atataattcaagtaatg 117  Q
     ||||||||||||||||    
T  19618207 ctataattcaagtaatg 19618191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 44102241 - 44102357
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||    
T  44102241 tcatgcagcttagttaaataacaacaataacacagtagtatacaaaaacagcatgacataataatatcaaatgcaagtaaacaacgtctcaattattcac 44102340  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  44102341 atataattcaagtaatg 44102357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 44615315 - 44615431
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  44615315 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaatacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 44615414  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  44615415 atataattcaagtaatg 44615431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 44773222 - 44773106
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  44773222 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 44773123  T
Q  101 atataattcaagtaatg 117  Q
    | |||||||||||||||    
T  44773122 aaataattcaagtaatg 44773106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 50222474 - 50222358
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  50222474 tcatgcagcttagttaaataacaacagcaacacaacattatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 50222375  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  50222374 atataattcaagtaatg 50222358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 14970842 - 14970727
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    |||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  14970842 tcatgcagcttagttaaataacaacagcaaaacagcaatatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 14970743  T
Q  101 atataattcaagtaat 116  Q
    ||||||||||||||||    
T  14970742 atataattcaagtaat 14970727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 15355460 - 15355343
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaa-caacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |    
T  15355460 tcatgcagcttagttaaataacaacagcgacacagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 15355361  T
Q  100 catataattcaagtaatg 117  Q
    |||||||||||| |||||    
T  15355360 catataattcaattaatg 15355343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 12610977 - 12611086
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  12610977 tcatgcagcttagttaaataacaacagcaacaca-------acaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattcac 12611069  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  12611070 atataattcaagtaatg 12611086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 21815717 - 21815604
Alignment:
Q  4 tgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttacata 103  Q
    ||||||||||||||||||| |||||||||||   |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||    
T  21815717 tgcagcttagttaaataacgacagcaacacaactgtatacaaaaacagcatgacataataatataaaatgcaagtcaacaacgtctcaattattcacata 21815618  T
Q  104 taattcaagtaatg 117  Q
    ||||||||||||||    
T  21815617 taattcaagtaatg 21815604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 44929015 - 44928898
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||| |||| ||| ||||||||||| |    
T  44929015 tcatgcagcttagttaaataacaacagcaacacaagcagtatacaaaaacagcatgacataataatgtcaaatgcaagtcaataacatctcaattattca 44928916  T
Q  100 catataattcaagtaatg 117  Q
    ||||||||||||||||||    
T  44928915 catataattcaagtaatg 44928898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 15367720 - 15367831
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaa-caacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |    
T  15367720 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 15367819  T
Q  100 catataattcaa 111  Q
    ||||||||||||    
T  15367820 catataattcaa 15367831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 15370048 - 15370159
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaa-caacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |    
T  15370048 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 15370147  T
Q  100 catataattcaa 111  Q
    ||||||||||||    
T  15370148 catataattcaa 15370159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 15402733 - 15402844
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaa-caacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |    
T  15402733 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 15402832  T
Q  100 catataattcaa 111  Q
    ||||||||||||    
T  15402833 catataattcaa 15402844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 15371232 - 15371343
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaa-caacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||| |    
T  15371232 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaatgtctcaattattca 15371331  T
Q  100 catataattcaa 111  Q
    ||||||||||||    
T  15371332 catataattcaa 15371343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 15373513 - 15373624
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaa-caacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||| |    
T  15373513 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaatgtctcaattattca 15373612  T
Q  100 catataattcaa 111  Q
    ||||||||||||    
T  15373613 catataattcaa 15373624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 16223562 - 16223673
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaa-caacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||| |    
T  16223562 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatctaatgcaagtcaatcaacgtctcaattattca 16223661  T
Q  100 catataattcaa 111  Q
    ||||||||||||    
T  16223662 catataattcaa 16223673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 7641317 - 7641211
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||          |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  7641317 tcatgcagcttagttaaataacaacagcaacaca----------aaaacaacatgacataataatatcaaatgcaagtcaacaacgtctcaattatttac 7641228  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  7641227 atataattcaagtaatg 7641211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 14280343 - 14280434
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaa 92  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||    
T  14280343 tcatgcagcttagttaaataacaacagcaacacggcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaa 14280434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 14038678 - 14038774
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattat 96  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||| |||| |||||||||||||||||||| |||||||| ||||||||||    
T  14038678 tcatgcagcttagttaaataacaacagcaacacatgcagtatacaaaaacaacatggcataataatatcaaatgcaagtcaacaacatctcaattat 14038774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 54798845 - 54798753
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaa 92  Q
    ||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  54798845 tcatgcagcttagttgaataacaacagcaacacaagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaa 54798753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 20149871 - 20149973
Alignment:
Q  16 aaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaa-caacgtctcaattatttacatataattcaagta 114  Q
    ||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||| ||||||||||||| ||    
T  20149871 aaataacaacagcgacacatcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcatcgtctcaattattcacatataattcaatta 20149970  T
Q  115 atg 117  Q
    |||    
T  20149971 atg 20149973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 16377612 - 16377497
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||||||| ||  ||||||||||  |||||||||||||||||||||||||||| |||||||| ||||||||||  |    
T  16377612 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaa--cagcatgacataataatatcaaatgcaagtcaacaacatctcaattataca 16377515  T
Q  100 catataattcaagtaatg 117  Q
       |||||||||||||||    
T  16377514 ttcataattcaagtaatg 16377497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 7088907 - 7089024
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||| ||||| ||| |||| ||| |  |||| |    
T  7088907 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttacatattca 7089006  T
Q  100 catataattcaagtaatg 117  Q
     |||| ||||||||||||    
T  7089007 aatattattcaagtaatg 7089024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 7798804 - 7798921
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||| ||||| ||| |||| ||| || |||| |    
T  7798804 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcatcaacatcttaaatattca 7798903  T
Q  100 catataattcaagtaatg 117  Q
      |||| |||||||||||    
T  7798904 attatacttcaagtaatg 7798921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 12902787 - 12902904
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||| || || ||| |||| ||| || |||| |    
T  12902787 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgtaattcatcaacatcttaaatattca 12902886  T
Q  100 catataattcaagtaatg 117  Q
     |||| ||||||||||||    
T  12902887 aatattattcaagtaatg 12902904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 52873458 - 52873375
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaaca 83  Q
    |||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||| ||||| ||||||    
T  52873458 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaaca 52873375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 7893733 - 7893850
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||| ||||||| ||  |||||||||||||||||||||||||||||||||| ||||| |||||| | ||| || |||| |    
T  7893733 tcatgcagcttagttaaataacaatagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattca 7893832  T
Q  100 catataattcaagtaatg 117  Q
      |||| |||||||||||    
T  7893833 attatacttcaagtaatg 7893850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 213 - 270
Target Start/End: Complemental strand, 44928801 - 44928744
Alignment:
Q  213 caaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44928801 caaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 44928744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 8574958 - 8574868
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaa 92  Q
    |||||||||||||||||||||||||||| |||||  ||||||| |||||| |||||||||||||||||||||| || |||||||| ||||||    
T  8574958 tcatgcagcttagttaaataacaacagcgacacaacagtatac-aaaacaacatgacataataatatcaaatgtaattcaacaacatctcaa 8574868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 207 - 266
Target Start/End: Original strand, 44102447 - 44102506
Alignment:
Q  207 ctatcccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  44102447 ctatcccaaggttcaactctcaacgactcgtgctacaaagatcgcaaaatcctaaacaag 44102506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 22636465 - 22636582
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||||| ||||| ||  ||| |||||||||||||||||||||||||||||| ||||| ||| |||| ||| || |||| |    
T  22636465 tcatgcagcttagttaaataacaacaacaacatagacagtttacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattca 22636564  T
Q  100 catataattcaagtaatg 117  Q
     ||||  |||||||||||    
T  22636565 aatattcttcaagtaatg 22636582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 44052859 - 44052976
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||| ||||||||||||||| ||||| ||  |||||||||||||||||||||||||||||||||| ||||| ||| |||| ||| || |||| |    
T  44052859 tcatgcagctcagttaaataacaacatcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattca 44052958  T
Q  100 catataattcaagtaatg 117  Q
     ||||  |||||||||||    
T  44052959 aatattcttcaagtaatg 44052976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 16270326 - 16270210
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||| ||||||||||| ||||||| ||  ||||||||||| |||||||||||||||||||||||||||| | |||||| ||| || |||| |    
T  16270326 tcatgcagcttaattaaataacaatagcaacataggcagtatacaaaa-cagcatgacataataatatcaaatgcaagttaacaacatcttaaatattca 16270228  T
Q  100 catataattcaagtaatg 117  Q
      |||| |||||||||||    
T  16270227 attatacttcaagtaatg 16270210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 23374450 - 23374365
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaac 85  Q
    |||||||||||||||||||||||||||||||| | | ||||||||||| |||||||||||||  ||||||| ||||| ||||||||    
T  23374450 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaatcagcatgacataaatatatcaattgcaattcaacaac 23374365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 211 - 266
Target Start/End: Complemental strand, 21815511 - 21815456
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  21815511 cccaaggttcaactctcaacgactcgtgcgatgaagatcgcaaaatcctaaacaag 21815456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 211 - 270
Target Start/End: Complemental strand, 52243073 - 52243014
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 270  Q
    ||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  52243073 cccaaagttcaactctttacgactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 52243014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 47 - 117
Target Start/End: Original strand, 22353910 - 22353980
Alignment:
Q  47 aacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttacatataattcaagtaatg 117  Q
    |||| |||||||||| |||||||| | ||| |||||||||||||||||||| |||||||||||||||||||    
T  22353910 aacaacatgacataacaatatcaattacaattcaacaacgtctcaattattcacatataattcaagtaatg 22353980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 6899921 - 6900037
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    ||||||| |||||||||||||||| ||||||| ||  ||||||||||| || |||  |||||||||||||||||||| |||||||| ||| || |||| |    
T  6899921 tcatgcatcttagttaaataacaatagcaacataggcagtatacaaaa-caacatagcataataatatcaaatgcaagtcaacaacatcttaaatattca 6900019  T
Q  100 catataattcaagtaatg 117  Q
      |||| |||||||||||    
T  6900020 attatacttcaagtaatg 6900037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 16240060 - 16239976
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaac 85  Q
    ||||||| |||| ||||||||||| ||||| | ||  ||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  16240060 tcatgcaacttaattaaataacaatagcaaaataggcagtatacaaaa-cagcatgacataataatatcaaatgcaagtcaacaac 16239976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 3096323 - 3096379
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacaca-gtagtatacaaaaacagcatga 56  Q
    |||||||||||||||||||||||||||||||| | | ||||||||||||||||||||    
T  3096323 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatga 3096379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 13942 - 13825
Alignment:
Q  1 tcatgcagcttagttaaataacaa-cagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattt 98  Q
    |||||||||||||||||  ||||| |||||||| ||  ||||| ||||| || ||||| |||| |||||||||||||| ||| |||| |||||| ||||     
T  13942 tcatgcagcttagttaataaacaaacagcaacataggcagtatgcaaaa-caacatgatataacaatatcaaatgcaagtcatcaacatctcaaatattc 13844  T
Q  99 acatataattcaagtaatg 117  Q
    | |||||||||||||||||    
T  13843 atatataattcaagtaatg 13825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 21815173 - 21815127
Alignment:
Q  220 caactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||    
T  21815173 caactctcaacgactcgtgcgatgaagatcgcaaaatcctaaacaag 21815127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 21818595 - 21818549
Alignment:
Q  220 caactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||    
T  21818595 caactctcaacgactcgtgcgatgaagatcgcaaaatcctaaacaag 21818549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 15464977 - 15464908
Alignment:
Q  45 aaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttacatataattcaagta 114  Q
    |||| ||||||| |||| ||||||||||||||||||||||| ||||||  ||| | ||||||||||||||    
T  15464977 aaaatagcatgatataacaatatcaaatgcaaatcaacaacatctcaaacattcatatataattcaagta 15464908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 207 - 270
Target Start/End: Complemental strand, 15868594 - 15868531
Alignment:
Q  207 ctatcccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 270  Q
    |||||||  ||||||||||  ||| ||||| |||||||||||||||||| ||||||||||||||    
T  15868594 ctatccccgggttcaactcataacaactcgcgcgacaaagatcgcaaaaacctaaacaagcatt 15868531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 266
Target Start/End: Complemental strand, 15464809 - 15464755
Alignment:
Q  212 ccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    ||||||||||||||  ||| ||| ||||||||||||| |||||||||||||||||    
T  15464809 ccaaggttcaactcataacaacttgtgcgacaaagattgcaaaatcctaaacaag 15464755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 257
Target Start/End: Original strand, 44053066 - 44053116
Alignment:
Q  207 ctatcccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatc 257  Q
    ||||||||||||||||||||| || |||||||| |||||| ||||||||||    
T  44053066 ctatcccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatc 44053116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 20157175 - 20157130
Alignment:
Q  207 ctatcccaaggttcaactctcaacgactcgtgcgacaaagatcgca 252  Q
    |||||||||||||||||||  ||| |||||||||||||||||||||    
T  20157175 ctatcccaaggttcaactcataacaactcgtgcgacaaagatcgca 20157130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 24028977 - 24029022
Alignment:
Q  207 ctatcccaaggttcaactctcaacgactcgtgcgacaaagatcgca 252  Q
    |||||||||||||||||||  ||| |||||||||||||||||||||    
T  24028977 ctatcccaaggttcaactcataacaactcgtgcgacaaagatcgca 24029022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 211 - 266
Target Start/End: Original strand, 17333521 - 17333576
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    ||||||| |||||||  |||  ||||||||||||||||||||||| ||||||||||    
T  17333521 cccaaggatcaactcataacatctcgtgcgacaaagatcgcaaaaccctaaacaag 17333576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 249
Target Start/End: Complemental strand, 13812694 - 13812652
Alignment:
Q  207 ctatcccaaggttcaactctcaacgactcgtgcgacaaagatc 249  Q
    |||||||||||||||||||  ||| ||||||||||||||||||    
T  13812694 ctatcccaaggttcaactcataacaactcgtgcgacaaagatc 13812652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 261
Target Start/End: Original strand, 14038889 - 14038939
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 261  Q
    |||||||||||||||| | | ||| |||||||| |||||||||||||||||    
T  14038889 cccaaggttcaactcttagcaacttgtgcgacacagatcgcaaaatcctaa 14038939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 261
Target Start/End: Complemental strand, 16239850 - 16239800
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 261  Q
    ||||| |||||||||||||| |||||||| |||||| |||||||| |||||    
T  16239850 cccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaa 16239800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 266
Target Start/End: Complemental strand, 14852733 - 14852700
Alignment:
Q  233 ctcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    ||||||||||||||||||||||| ||||||||||    
T  14852733 ctcgtgcgacaaagatcgcaaaaccctaaacaag 14852700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 22634098 - 22634053
Alignment:
Q  207 ctatcccaaggttcaactctcaacgactcgtgcgacaaagatcgca 252  Q
    |||||||||||||||||||  ||| | |||||||||||||||||||    
T  22634098 ctatcccaaggttcaactcataacaaatcgtgcgacaaagatcgca 22634053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 17046517 - 17046600
Alignment:
Q  1 tcatgcagcttagttaaataac-aacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaac 85  Q
    |||||||||||||||||||||| |||||||||| | |||||||   | |||| ||||||||||| ||||||||| ||| ||| ||||    
T  17046517 tcatgcagcttagttaaataacaaacagcaacataggtagtat---agaacaacatgacataattatatcaaattcaattcatcaac 17046600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 17047949 - 17047909
Alignment:
Q  214 aaggttcaactctcaacgactcgtgcgacaaagatcgcaaa 254  Q
    ||||||||||||||||| |||||||| |||||| |||||||    
T  17047949 aaggttcaactctcaacaactcgtgcaacaaaggtcgcaaa 17047909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 255
Target Start/End: Original strand, 22636675 - 22636719
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaa 255  Q
    |||||||||||| ||||||| |||||||| |||||| ||||||||    
T  22636675 cccaaggttcaattctcaacaactcgtgcaacaaaggtcgcaaaa 22636719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 109; Significance: 7e-55; HSPs: 79)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 50242849 - 50242965
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||    
T  50242849 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacaacatgacataataatatcaaatgcaaatcaacaacgtctcaattattcac 50242948  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  50242949 atataattcaagtaatg 50242965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 7781482 - 7781366
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  7781482 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattcac 7781383  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  7781382 atataattcaagtaatg 7781366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 29172718 - 29172602
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  29172718 tcatgcagcttagttaaataacaacagcaacacagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 29172619  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  29172618 atataattcaagtaatg 29172602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 8899121 - 8899237
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  8899121 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 8899220  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  8899221 atataattcaagtaatg 8899237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 9707742 - 9707626
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||    
T  9707742 tcatgcagcttagttaaataacaacagcaacacagcagtatacaaaaacagcatgacataataatatcaaatacaagtcaacaacgtctcaattattcac 9707643  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  9707642 atataattcaagtaatg 9707626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 17463205 - 17463321
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  17463205 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 17463304  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  17463305 atataattcaagtaatg 17463321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 28848746 - 28848630
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  28848746 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 28848647  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  28848646 atataattcaagtaatg 28848630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 34159353 - 34159469
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  34159353 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 34159452  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  34159453 atataattcaagtaatg 34159469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 38962026 - 38961910
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  38962026 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 38961927  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  38961926 atataattcaagtaatg 38961910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 45607042 - 45606926
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  45607042 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 45606943  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  45606942 atataattcaagtaatg 45606926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 55476518 - 55476634
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  55476518 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 55476617  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  55476618 atataattcaagtaatg 55476634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 12567587 - 12567703
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  12567587 tcatgcagcttagttaaataacaacagcaacacagcaatatacaaaaacatcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 12567686  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  12567687 atataattcaagtaatg 12567703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 13544052 - 13544168
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  13544052 tcatgcagcttagttaaataacaacagcaacacagcaatatacaaaaacatcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 13544151  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  13544152 atataattcaagtaatg 13544168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 16454416 - 16454300
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  16454416 tcatgcaacttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 16454317  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  16454316 atataattcaagtaatg 16454300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 17446790 - 17446674
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  17446790 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 17446691  T
Q  101 atataattcaagtaatg 117  Q
    |||| ||||||||||||    
T  17446690 atatcattcaagtaatg 17446674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 17672653 - 17672769
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    |||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  17672653 tcatgcagcttagttaaataacaacaacaacatagcagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattcac 17672752  T
Q  101 atataattcaagtaatg 117  Q
    ||||||||||| |||||    
T  17672753 atataattcaaataatg 17672769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 13151926 - 13151809
Alignment:
Q  1 tcatgcagctt-agttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    ||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |    
T  13151926 tcatgcagctttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattca 13151827  T
Q  100 catataattcaagtaatg 117  Q
    ||||||||||||||||||    
T  13151826 catataattcaagtaatg 13151809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 13154391 - 13154274
Alignment:
Q  1 tcatgcagctt-agttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    ||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |    
T  13154391 tcatgcagctttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattca 13154292  T
Q  100 catataattcaagtaatg 117  Q
    ||||||||||||||||||    
T  13154291 catataattcaagtaatg 13154274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 6469269 - 6469153
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||    
T  6469269 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattagtcac 6469170  T
Q  101 atataattcaagtaatg 117  Q
    |||||||| ||||||||    
T  6469169 atataattgaagtaatg 6469153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 10247858 - 10247742
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    |||| |||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  10247858 tcatacagcttagttaaataacaacagcagcacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 10247759  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  10247758 atataattcaagtaatg 10247742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 16282946 - 16282830
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||| ||    
T  16282946 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatattgaatgcaagtcaacaacgtctcaattattcac 16282847  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  16282846 atataattcaagtaatg 16282830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 15977542 - 15977646
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  15977542 tcatgcagcttagttaaataacaacagcaacacaatagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 15977641  T
Q  101 atata 105  Q
    |||||    
T  15977642 atata 15977646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 53070788 - 53070672
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    |||||||||||||||||||||||||||||||| |  |||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||| ||    
T  53070788 tcatgcagcttagttaaataacaacagcaacataacagtatacaaaaacaacaagacataataatatcaaatgcaagtcaacaacgtctcaattattcac 53070689  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  53070688 atataattcaagtaatg 53070672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 41123917 - 41124030
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||   |||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  41123917 tcatgcagcttagttaaataacaaca---acacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 41124013  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  41124014 atataattcaagtaatg 41124030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 15412456 - 15412563
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaa-caacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |    
T  15412456 tcatgcagcttagttaaataacaacagcgacacagtagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 15412555  T
Q  100 catataat 107  Q
    || |||||    
T  15412556 cagataat 15412563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 14972884 - 14973001
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||| ||    
T  14972884 tcatgcagcttagttaaataacaacagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacatctca--tatata 14972981  T
Q  100 cat--ataattcaagtaatg 117  Q
    |||  |||||||||||||||    
T  14972982 cattcataattcaagtaatg 14973001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 43550614 - 43550497
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||  ||||||||| | | ||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |    
T  43550614 tcatgcagcttagttaaataatgacagcaacatatgcagtatgcaaaaacaacatgacataataatatcaaatgcaagtcaacaacgtctcaattattca 43550515  T
Q  100 catataattcaagtaatg 117  Q
    ||||||||||||||||||    
T  43550514 catataattcaagtaatg 43550497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 8499545 - 8499652
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaa-caacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||| |||||||||||| |    
T  8499545 tcatgcagcttagttaaataacaacagcgacacagtagtatacaaaaacaacatgacataataatatcaaatgcaagtcaatcaatgtctcaattattca 8499644  T
Q  100 catataat 107  Q
    || |||||    
T  8499645 cagataat 8499652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 12119860 - 12119753
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaa-caacgtctcaattattta 99  Q
    ||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |    
T  12119860 tcatgcagctttgttaaataacaacagcgacacagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 12119761  T
Q  100 catataat 107  Q
    || |||||    
T  12119760 cagataat 12119753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 55500969 - 55501053
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaac 85  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  55500969 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaac 55501053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 25476476 - 25476359
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacag-tagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    ||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||  |    
T  25476476 tcatgtagcttagttaaaaaacaacagcaacacaggtagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaagtataca 25476377  T
Q  100 catataattcaagtaatg 117  Q
       |||||||||||||||    
T  25476376 ttcataattcaagtaatg 25476359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 36166625 - 36166715
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaa 92  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||    
T  36166625 tcatgcagcttagttaaataacaacagcgacacagcagtatacaaaa-cagcatgacataataatatcaaatgcaagtcaacaacatctcaa 36166715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 40213811 - 40213716
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattat 96  Q
    ||||| |||||||||||||||||||| |||||||| |||||||| ||||| ||||||||||||||||||||||||| |||||||| ||||||||||    
T  40213811 tcatgtagcttagttaaataacaacatcaacacagcagtatacataaacatcatgacataataatatcaaatgcaagtcaacaacatctcaattat 40213716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 21618476 - 21618566
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaa 92  Q
    |||||||||||||||||||||||||||| |||||  ||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||    
T  21618476 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaa-cagcatgacataataatatcaaatgcaagtcaacaacatctcaa 21618566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 44494836 - 44494918
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaaca 83  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||  ||||||||    
T  44494836 tcatgcagcttagttaaataacaacagcgacacagcagtatacaaaaacagcataacataataatatcaaatgataatcaaca 44494918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 12399239 - 12399324
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaac 85  Q
    |||||||||||||||||||||||||||||||| ||  ||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  12399239 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaatcagcatgacataataatatcaaatgcaattcaacaac 12399324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 42386440 - 42386537
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatt 97  Q
    |||||||| ||||||||||||||||||||||| ||  ||||||||||||||||||||||||| |||||||||||||| |||||||| |||||| ||||    
T  42386440 tcatgcagtttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataacaatatcaaatgcaagtcaacaacatctcaaatatt 42386537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 17487886 - 17488003
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||||| | ||  |||||||||||||||||||||||||||||||||| ||||| ||| |||| ||| || |||| |    
T  17487886 tcatgcagcttagttaaataacaacagcaaaatagacagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattca 17487985  T
Q  100 catataattcaagtaatg 117  Q
     ||||  |||||||||||    
T  17487986 aatattcttcaagtaatg 17488003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 17499368 - 17499485
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||||| | ||  |||||||||||||||||||||||||||||||||| ||||| ||| |||| ||| || |||| |    
T  17499368 tcatgcagcttagttaaataacaacagcaaaatagacagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattca 17499467  T
Q  100 catataattcaagtaatg 117  Q
     ||||  |||||||||||    
T  17499468 aatattcttcaagtaatg 17499485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 18438564 - 18438649
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaac 85  Q
    ||||| |||||||||||||||||||||||||| ||  |||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  18438564 tcatgtagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgatataataatatcaaatgcaagtcaacaac 18438649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 43840962 - 43841079
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||||| ||||| ||  |||||||||||||||||||||||||||||||||| ||||| |||||| | ||| || |||| |    
T  43840962 tcatgcagcttagttaaataacaacaacaacatagacagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattca 43841061  T
Q  100 catataattcaagtaatg 117  Q
      |||| |||||||||||    
T  43841062 attatacttcaagtaatg 43841079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 10557012 - 10557087
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaa 76  Q
    |||||||||||||||||||||||||||| |||||  || |||||||||| ||||||||||||||||||||||||||    
T  10557012 tcatgcagcttagttaaataacaacagcgacacatcagcatacaaaaacggcatgacataataatatcaaatgcaa 10557087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 26686917 - 26687000
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaaca 83  Q
    |||||||||||||||||||||||||| ||||| ||  |||||||||||||||||||||||||||||||||| ||||| ||||||    
T  26686917 tcatgcagcttagttaaataacaacaacaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaaca 26687000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 211 - 266
Target Start/End: Complemental strand, 53070578 - 53070523
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53070578 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 53070523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 13442304 - 13442421
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    ||||||||||||||||||||||||| |||||| ||  |||||||||||||| ||||||||||||||||||| ||||| ||| |||| ||| || |||| |    
T  13442304 tcatgcagcttagttaaataacaacggcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaattcatcaacatcttaaatattca 13442403  T
Q  100 catataattcaagtaatg 117  Q
     ||||  |||||||||||    
T  13442404 aatattcttcaagtaatg 13442421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 20698526 - 20698409
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||| |||||||||||| ||||| ||| |||| ||| |  |||| |    
T  20698526 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttatatattca 20698427  T
Q  100 catataattcaagtaatg 117  Q
     ||||  |||||||||||    
T  20698426 aatattcttcaagtaatg 20698409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 23083452 - 23083367
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaac 85  Q
    |||||||||||||||||||||||| ||||||| ||  ||||||||||||||| |||||||||||||||||| ||||| ||||||||    
T  23083452 tcatgcagcttagttaaataacaatagcaacataggcagtatacaaaaacagaatgacataataatatcaattgcaagtcaacaac 23083367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 24153299 - 24153215
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacag-tagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaac 85  Q
    |||||||||||||||||||||| | ||||||| || |||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  24153299 tcatgcagcttagttaaataacgatagcaacataggtagtatacaaaa-cagcatgacataataatatcaaatgcaagtcaacaac 24153215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 211 - 270
Target Start/End: Complemental strand, 17248166 - 17248107
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 270  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  17248166 cccaaggtttaactctcaacgactcgtgcgacaaagatcgcaaaattctaaacaagcatt 17248107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 207 - 270
Target Start/End: Original strand, 23274925 - 23274988
Alignment:
Q  207 ctatcccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 270  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  23274925 ctatcccaaggctcaactctcaacaactcgtgcgacaaagatcgcaaaaacctaaacaagcatt 23274988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 211 - 270
Target Start/End: Complemental strand, 52523607 - 52523548
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 270  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  52523607 cccaaagttcaactctcaatgactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 52523548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 17737263 - 17737337
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagta---tacaaaaacagcatgacataataatatcaaat 72  Q
    ||||||||||||||||||||||||||||||||||| | ||   ||||| ||||||||||||||||||||||||||    
T  17737263 tcatgcagcttagttaaataacaacagcaacacagcaatatactacaacaacagcatgacataataatatcaaat 17737337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 11424850 - 11424768
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaaca 83  Q
    |||||||||||||||||||||||||||||||| | | ||||||| ||||||||||||||||| ||||||||  |||||||||||    
T  11424850 tcatgcagcttagttaaataacaacagcaacataggcagtatac-aaaacagcatgacataacaatatcaatagcaaatcaaca 11424768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 14572619 - 14572688
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacag-tagtatacaaaaacagcatgacataataatatcaa 70  Q
    |||||||||||||||||||||||||||||||| ||  ||||||| ||||||||||||||||||||||||||    
T  14572619 tcatgcagcttagttaaataacaacagcaacatagacagtatac-aaaacagcatgacataataatatcaa 14572688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 2051073 - 2051020
Alignment:
Q  217 gttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 270  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  2051073 gttcaactctcaacaactcatgcgacaaagatcgcaaaatcctaaacaagcatt 2051020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 117
Target Start/End: Complemental strand, 14576915 - 14576807
Alignment:
Q  9 cttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttacatataat 107  Q
    |||||||||||||||||||||||| ||  |||||| || |||||||||||||||||||||||| ||||| |||||||| ||| || |||| |  |||| |    
T  14576915 cttagttaaataacaacagcaacatagacagtata-aacaacagcatgacataataatatcaattgcaagtcaacaacatcttaaatattcaattatact 14576817  T
Q  108 tcaagtaatg 117  Q
    ||||||||||    
T  14576816 tcaagtaatg 14576807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 211 - 266
Target Start/End: Original strand, 42386652 - 42386707
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    ||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||    
T  42386652 cccaaggttcaactcacaacaactcgtgcgacaaagttcgcaaaatcctaaacaag 42386707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 211 - 261
Target Start/End: Complemental strand, 14576713 - 14576663
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 261  Q
    |||||||||||||||||||| |||||||| |||||| ||||||||||||||    
T  14576713 cccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaa 14576663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 24340814 - 24340697
Alignment:
Q  1 tcatgcagcttagttaaataacaa-cagcaacaca-gtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattt 98  Q
    ||||||||||||||||| |||||| |||||||| | | ||||| || || || ||||| ||||||||||| || |||| | |||||| |||||| ||||     
T  24340814 tcatgcagcttagttaattaacaatcagcaacatatgcagtatgcacaa-catcatgatataataatatcgaacgcaagtaaacaacatctcaaatattc 24340716  T
Q  99 acatataattcaagtaatg 117  Q
    |||||||||||||||||||    
T  24340715 acatataattcaagtaatg 24340697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 117
Target Start/End: Complemental strand, 2051238 - 2051173
Alignment:
Q  52 catgacataataatatcaaatgcaaatcaacaacgtctcaattatttacatataattcaagtaatg 117  Q
    ||||| |||| ||||||||||||||||||||||| ||||||  ||| | |||||||||||||||||    
T  2051238 catgatataacaatatcaaatgcaaatcaacaacatctcaaacattcatatataattcaagtaatg 2051173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 52523820 - 52523701
Alignment:
Q  1 tcatgcagcttagttaaataacaa-cagcaacacagt-agtatacaaaaacag--catgacataataatatcaaatgcaaatcaacaacgtctcaattat 96  Q
    |||||||||||||||||||||||| || ||||| ||  ||||| ||||| |||  ||||| |||| |||||| |||||||||||||||| ||||||  ||    
T  52523820 tcatgcagcttagttaaataacaaacaacaacataggcagtatgcaaaa-cagttcatgatataacaatatcgaatgcaaatcaacaacatctcaaacat 52523722  T
Q  97 ttacatataattcaagtaatg 117  Q
    | | |||||||||||||||||    
T  52523721 tcatatataattcaagtaatg 52523701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 23274717 - 23274832
Alignment:
Q  1 tcatgcagcttagttaaataacaa-cagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattt 98  Q
    ||||||| ||||||||| |||||| |||||||| ||  ||||| ||||| || ||||| ||||||||||| || |||| | |||||| |||||| ||||     
T  23274717 tcatgcaacttagttaattaacaatcagcaacataggcagtatgcaaaa-catcatgatataataatatcgaacgcaagtaaacaacatctcaaatattc 23274815  T
Q  99 acatataattcaagtaa 115  Q
    |||||||||||||||||    
T  23274816 acatataattcaagtaa 23274832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 25476263 - 25476215
Alignment:
Q  213 caaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 261  Q
    |||||||||||||||||| |||||||| |||||| ||||||||||||||    
T  25476263 caaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaa 25476215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 261
Target Start/End: Original strand, 14572829 - 14572879
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 261  Q
    |||||||||||||||||||| |||||||| |||||| |||||||| |||||    
T  14572829 cccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaa 14572879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 257
Target Start/End: Original strand, 17488093 - 17488143
Alignment:
Q  207 ctatcccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatc 257  Q
    ||||||||||||||||||||| || |||||||| |||||| ||||||||||    
T  17488093 ctatcccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatc 17488143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 257
Target Start/End: Original strand, 17499575 - 17499625
Alignment:
Q  207 ctatcccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatc 257  Q
    ||||||||||||||||||||| || |||||||| |||||| ||||||||||    
T  17499575 ctatcccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatc 17499625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 261
Target Start/End: Complemental strand, 40213601 - 40213551
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 261  Q
    ||||||||| |||||||||| |||||||| |||||| ||||||||||||||    
T  40213601 cccaaggttaaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaa 40213551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 257
Target Start/End: Original strand, 13442513 - 13442561
Alignment:
Q  209 atcccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatc 257  Q
    ||||||||||||||||||| || |||||||| |||||| ||||||||||    
T  13442513 atcccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatc 13442561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 249
Target Start/End: Original strand, 12339995 - 12340030
Alignment:
Q  214 aaggttcaactctcaacgactcgtgcgacaaagatc 249  Q
    ||||||||||||||||| ||||||||||||||||||    
T  12339995 aaggttcaactctcaacaactcgtgcgacaaagatc 12340030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 250
Target Start/End: Original strand, 14668996 - 14669039
Alignment:
Q  207 ctatcccaaggttcaactctcaacgactcgtgcgacaaagatcg 250  Q
    |||||||||||||||||||  ||| |||||||||||||||||||    
T  14668996 ctatcccaaggttcaactcataacaactcgtgcgacaaagatcg 14669039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 261
Target Start/End: Complemental strand, 11424643 - 11424593
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 261  Q
    ||||| |||||||||||||| |||||||| |||||| |||||||| |||||    
T  11424643 cccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaa 11424593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 261
Target Start/End: Original strand, 18438775 - 18438825
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 261  Q
    ||||||||||||| |||||| |||||||| |||||| |||||||| |||||    
T  18438775 cccaaggttcaacactcaacaactcgtgcaacaaaggtcgcaaaaacctaa 18438825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 257
Target Start/End: Complemental strand, 20698320 - 20698270
Alignment:
Q  207 ctatcccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatc 257  Q
    |||||| |||||||||||||| || |||||||| |||||| ||||||||||    
T  20698320 ctatccaaaggttcaactctcgacaactcgtgccacaaaggtcgcaaaatc 20698270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 4588673 - 4588628
Alignment:
Q  207 ctatcccaaggttcaactctcaacgactcgtgcgacaaagatcgca 252  Q
    |||||||||||||||||||  ||| ||||||||||||||| |||||    
T  4588673 ctatcccaaggttcaactcataacaactcgtgcgacaaagctcgca 4588628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 14665841 - 14665886
Alignment:
Q  207 ctatcccaaggttcaactctcaacgactcgtgcgacaaagatcgca 252  Q
    ||||| |||||||||||||  ||| |||||||||||||||||||||    
T  14665841 ctatcacaaggttcaactcataacaactcgtgcgacaaagatcgca 14665886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 14735354 - 14735399
Alignment:
Q  207 ctatcccaaggttcaactctcaacgactcgtgcgacaaagatcgca 252  Q
    ||||| |||||||||||||  ||| |||||||||||||||||||||    
T  14735354 ctatcacaaggttcaactcataacaactcgtgcgacaaagatcgca 14735399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 266
Target Start/End: Complemental strand, 16839530 - 16839497
Alignment:
Q  233 ctcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    ||||||||||||||||||||||| ||||||||||    
T  16839530 ctcgtgcgacaaagatcgcaaaaccctaaacaag 16839497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 37251205 - 37251165
Alignment:
Q  52 catgacataataatatcaaatgcaaatcaacaacgtctcaa 92  Q
    ||||| |||| ||||||||||||||||||||||| ||||||    
T  37251205 catgatataacaatatcaaatgcaaatcaacaacatctcaa 37251165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 43926042 - 43926082
Alignment:
Q  52 catgacataataatatcaaatgcaaatcaacaacgtctcaa 92  Q
    ||||| |||| ||||||||||||||||||||||| ||||||    
T  43926042 catgatataacaatatcaaatgcaaatcaacaacatctcaa 43926082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 105; Significance: 2e-52; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 14409579 - 14409463
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  14409579 tcatgcagcttagttaaataacaacagcaacacagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 14409480  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  14409479 atataattcaagtaatg 14409463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 16413451 - 16413335
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  16413451 tcatgcagcttagttaaataacaacagcaacacagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 16413352  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  16413351 atataattcaagtaatg 16413335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 41598215 - 41598331
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  41598215 tcatgcagcttagttgaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 41598314  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  41598315 atataattcaagtaatg 41598331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 1484429 - 1484545
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  1484429 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 1484528  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  1484529 atataattcaagtaatg 1484545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 5853427 - 5853311
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  5853427 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 5853328  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  5853327 atataattcaagtaatg 5853311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 20046330 - 20046214
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  20046330 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacgtctcaattatttac 20046231  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  20046230 atataattcaagtaatg 20046214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 20403254 - 20403370
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  20403254 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 20403353  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  20403354 atataattcaagtaatg 20403370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 22001780 - 22001896
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  22001780 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 22001879  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  22001880 atataattcaagtaatg 22001896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 15203366 - 15203250
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||    
T  15203366 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgtaagtcaacaacgtctcaattattcac 15203267  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  15203266 atataattcaagtaatg 15203250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 4483308 - 4483423
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  4483308 tcatgcagcttagttaa-taacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 4483406  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  4483407 atataattcaagtaatg 4483423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 4542508 - 4542392
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  4542508 tcatgcagcttagttaaataacaacagcaacacaacaagatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 4542409  T
Q  101 atataattcaagtaatg 117  Q
    ||||| |||||||||||    
T  4542408 atatagttcaagtaatg 4542392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 14823800 - 14823916
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    |||||||||  ||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  14823800 tcatgcagcaaagttaaataacaacaacaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 14823899  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  14823900 atataattcaagtaatg 14823916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 19896292 - 19896411
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgac---ataataatatcaaatgcaaatcaacaacgtctcaattatt 97  Q
    ||||||||||||||||||||||||||||||||||   ||||||||||||||||||||   ||||||||||||||||||| ||||||||||||||||||||    
T  19896292 tcatgcagcttagttaaataacaacagcaacacaacggtatacaaaaacagcatgacataataataatatcaaatgcaagtcaacaacgtctcaattatt 19896391  T
Q  98 tacatataattcaagtaatg 117  Q
     |||||||||||||||||||    
T  19896392 cacatataattcaagtaatg 19896411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 19801516 - 19801401
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    |||||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||| ||    
T  19801516 tcatgcagcttagttaaataacaatagcaacacaacagtatacaaaa-cagcatgacataataatatcaaacgcaagtcaacaacgtctcaattattcac 19801418  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  19801417 atataattcaagtaatg 19801401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 15070585 - 15070692
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaa-caacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |    
T  15070585 tcatgcagcttagttaaataacaacagcgacacagtagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 15070684  T
Q  100 catataat 107  Q
    || |||||    
T  15070685 cagataat 15070692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 25484400 - 25484294
Alignment:
Q  4 tgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttacata 103  Q
    |||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  25484400 tgcagcttagttaaataacaacagc-------tagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattcacata 25484308  T
Q  104 taattcaagtaatg 117  Q
    ||||||||||||||    
T  25484307 taattcaagtaatg 25484294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 45290830 - 45290713
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaa-caacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||| ||  ||| |||||||||||||||| |    
T  45290830 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgtaagccaatcaacgtctcaattattca 45290731  T
Q  100 catataattcaagtaatg 117  Q
    |||||||||||| |||||    
T  45290730 catataattcaattaatg 45290713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 16092433 - 16092341
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaa 92  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  16092433 tcatgcagcttagttaaataacaacagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaa 16092341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 19937141 - 19937030
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaa-caacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||| | |    
T  19937141 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataagatcaaatgcaagtcaatcaacgtctcaattactca 19937042  T
Q  100 catataattcaa 111  Q
    || |||||||||    
T  19937041 caaataattcaa 19937030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 26223947 - 26224062
Alignment:
Q  2 catgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttaca 101  Q
    ||||||||||| ||||||||||||||||| | || | |||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||| |||    
T  26223947 catgcagcttaattaaataacaacagcaataaagcaatatacaaaaatagcatgacataataatatcaaatgcaagtcaacaacatctcaattattcaca 26224046  T
Q  102 tataattcaagtaatg 117  Q
    ||||||| || |||||    
T  26224047 tataatttaattaatg 26224062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 6759288 - 6759371
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaaca 83  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||| ||||||    
T  6759288 tcatgcagcttagttaaataacaacagcaacacaggcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaaca 6759371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 7372808 - 7372925
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||| ||||| |||||| | ||| || |||| |    
T  7372808 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattca 7372907  T
Q  100 catataattcaagtaatg 117  Q
      |||| |||||||||||    
T  7372908 attatacttcaagtaatg 7372925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 21919091 - 21919006
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaac 85  Q
    |||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  21919091 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcaacaac 21919006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 28649135 - 28649018
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||| ||||||| ||  ||||||| |||||||||||||||||||||||||||||||| |||||||| ||| ||||||  |    
T  28649135 tcatgcagcttagttaaataacaaaagcaacataggcagtatacgaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaattataca 28649036  T
Q  100 catataattcaagtaatg 117  Q
       |||||||||||||||    
T  28649035 ttcataattcaagtaatg 28649018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 26219744 - 26219834
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaa 92  Q
    |||||||||||||||||||||||||||| |||||| ||||||| |||| || |||||||||||||||||||||||| |||||||| ||||||    
T  26219744 tcatgcagcttagttaaataacaacagcgacacagcagtatac-aaaatagtatgacataataatatcaaatgcaagtcaacaacatctcaa 26219834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 18818500 - 18818383
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||| || || |||||| | ||| || |||| |    
T  18818500 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgtaagtcaacatcatcttaaatattca 18818401  T
Q  100 catataattcaagtaatg 117  Q
      |||| |||||||||||    
T  18818400 attatacttcaagtaatg 18818383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 20536238 - 20536355
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    ||||||||||||||||||||||||||| |||| ||  |||||||||||||||||||||||||||||||||| ||||| ||| |||| ||| || |||| |    
T  20536238 tcatgcagcttagttaaataacaacagaaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattca 20536337  T
Q  100 catataattcaagtaatg 117  Q
     ||||  |||||||||||    
T  20536338 aatattcttcaagtaatg 20536355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 22626766 - 22626882
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||||||| ||  ||||||||||| || ||||||||||||||||||||| |||||||||||| ||| || |||| |    
T  22626766 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaa-caacatgacataataatatcaaatacaaatcaacaacatcttaaatattca 22626864  T
Q  100 catataattcaagtaatg 117  Q
      |||| |||||||||||    
T  22626865 attatacttcaagtaatg 22626882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 23406409 - 23406492
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaaca 83  Q
    |||||||||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||| ||||| ||||||    
T  23406409 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtcaaca 23406492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 211 - 270
Target Start/End: Original strand, 41598425 - 41598484
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 270  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  41598425 cccaaggttcaactctcaacgactcgtgcggcaaagatcgcaaaatcctaaacaagcatt 41598484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 21924019 - 21923902
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||||||| ||  ||| |||||||||| |||||||| |||||||||| ||||| |||||||| ||| || |||| |    
T  21924019 tcatgcagcttagttaaataacaacagcaacataggcagtctacaaaaacaacatgacatgataatatcaattgcaagtcaacaacatcttaaatattca 21923920  T
Q  100 catataattcaagtaatg 117  Q
      |||| |||||||||||    
T  21923919 attatacttcaagtaatg 21923902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 22875095 - 22875211
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||| || |||||||||||  ||||||||||| || ||||||||||||||||||||||||| |||||||| |||||| |||  |    
T  22875095 tcatgcagcttagttaaatagcagcagcaacacaggcagtatacaaaa-caacatgacataataatatcaaatgcaagtcaacaacatctcaaatataca 22875193  T
Q  100 catataattcaagtaatg 117  Q
       |||||||||||||||    
T  22875194 ttcataattcaagtaatg 22875211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 26225382 - 26225292
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaa 92  Q
    |||||||||||||||||||||||||||| |||||  | ||||||||| ||| |||||||||||||||||||| ||| |||||||| ||||||    
T  26225382 tcatgcagcttagttaaataacaacagcgacacaacaatatacaaaa-cagtatgacataataatatcaaatacaagtcaacaacatctcaa 26225292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 211 - 266
Target Start/End: Complemental strand, 19801307 - 19801252
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  19801307 cccaaggttcaactctcaatgactcgtgcgacaaagatcgaaaaatcctaaacaag 19801252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 270
Target Start/End: Complemental strand, 13507968 - 13507905
Alignment:
Q  207 ctatcccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 270  Q
    |||||||| | ||||||||||||| |||||||||||||||||||||||| |||||||| |||||    
T  13507968 ctatcccacgattcaactctcaacaactcgtgcgacaaagatcgcaaaaacctaaacatgcatt 13507905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 270
Target Start/End: Complemental strand, 13597500 - 13597437
Alignment:
Q  207 ctatcccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 270  Q
    |||||||| | ||||||||||||| |||||||||||||||||||||||| |||||||| |||||    
T  13597500 ctatcccacgattcaactctcaacaactcgtgcgacaaagatcgcaaaaacctaaacatgcatt 13597437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 31971287 - 31971356
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaa 70  Q
    |||||||||||||||||||||||||||||||| | | ||||||| |||||| |||||||||||||||||||    
T  31971287 tcatgcagcttagttaaataacaacagcaacataggcagtatac-aaaacaacatgacataataatatcaa 31971356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 18879322 - 18879210
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||||||| | | ||||||||||||||     ||||||||||||||| ||||| ||| |||| ||| || |||| |    
T  18879322 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaaca-----acataataatatcaattgcaattcatcaacatcttaaatattca 18879228  T
Q  100 catataattcaagtaatg 117  Q
     ||||  |||||||||||    
T  18879227 aatattcttcaagtaatg 18879210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 45131087 - 45131019
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaa 70  Q
    |||||||||||||||||||||||||||||||| | | |||| ||  |||||||||||||||||||||||||    
T  45131087 tcatgcagcttagttaaataacaacagcaacataggcagtaaac--aaacagcatgacataataatatcaa 45131019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 211 - 261
Target Start/End: Complemental strand, 28648924 - 28648874
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 261  Q
    |||||||||||||||||||| |||||||| |||||| ||||||||||||||    
T  28648924 cccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaa 28648874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 266
Target Start/End: Complemental strand, 40492730 - 40492677
Alignment:
Q  213 caaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    ||||| ||||||| ||||  ||||||||||||||||||||||||||||||||||    
T  40492730 caaggatcaactcacaacatctcgtgcgacaaagatcgcaaaatcctaaacaag 40492677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 211 - 266
Target Start/End: Complemental strand, 22963299 - 22963244
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    ||||||| |||||||  |||  ||||||||||||||||||||||||||||||||||    
T  22963299 cccaagggtcaactcataacatctcgtgcgacaaagatcgcaaaatcctaaacaag 22963244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 117
Target Start/End: Complemental strand, 13508129 - 13508059
Alignment:
Q  47 aacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttacatataattcaagtaatg 117  Q
    |||| ||||| ||||||||||| || |||| | |||||| |||||| |||| |||||||||||||||||||    
T  13508129 aacatcatgatataataatatcgaacgcaagtaaacaacatctcaaatattcacatataattcaagtaatg 13508059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 13597708 - 13597591
Alignment:
Q  1 tcatgcagcttagttaaataacaa-cagcaacaca-gtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattt 98  Q
    ||||||||||||||||| |||||| |||||||| | | || || ||||| || ||||| ||||||||||| || |||| | |||||| || ||| ||||     
T  13597708 tcatgcagcttagttaattaacaatcagcaacataagcagaatgcaaaa-catcatgatataataatatcgaacgcaagtaaacaacatcccaaatattc 13597610  T
Q  99 acatataattcaagtaatg 117  Q
    |||||||||||||||||||    
T  13597609 acatataattcaagtaatg 13597591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 261
Target Start/End: Original strand, 22626976 - 22627026
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 261  Q
    |||||||||||||||||||| |||||||| |||||| |||||||| |||||    
T  22626976 cccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaa 22627026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 21285627 - 21285719
Alignment:
Q  1 tcatgcagcttagttaaataac-aacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaa 92  Q
    ||||||||||| |||||||||| |||| ||||| | | ||||| | |||||| ||||| |||| ||||||||||||||||||||||| ||||||    
T  21285627 tcatgcagctttgttaaataacaaacaacaacataggcagtatgc-aaaacaacatgatataacaatatcaaatgcaaatcaacaacatctcaa 21285719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 266
Target Start/End: Original strand, 16799732 - 16799784
Alignment:
Q  214 aaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    |||| |||||||| |||| |||||||||||||||||| |||| ||||||||||    
T  16799732 aaggatcaactcttaacgtctcgtgcgacaaagatcgtaaaaccctaaacaag 16799784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 20498637 - 20498709
Alignment:
Q  45 aaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttacatataattcaagtaatg 117  Q
    |||| ||||||| |||| |||||||||||||| ||| |||| ||||||  ||| | |||||||||||||||||    
T  20498637 aaaatagcatgatataacaatatcaaatgcaagtcatcaacatctcaaacattcatatataattcaagtaatg 20498709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 21389541 - 21389458
Alignment:
Q  1 tcatgcagcttagttaaataac-aacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaac 85  Q
    |||||||||||||||||||||| |||| ||||| | |||||||||   |||||||||||||||| ||||||||| ||| ||| ||||    
T  21389541 tcatgcagcttagttaaataacaaacaacaacataggtagtatac---aacagcatgacataattatatcaaattcaattcatcaac 21389458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 21778867 - 21778784
Alignment:
Q  1 tcatgcagcttagttaaataac-aacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaac 85  Q
    |||||||||||||||||||||| |||| ||||| | |||||||||   |||||||||||||||| ||||||||| ||| ||| ||||    
T  21778867 tcatgcagcttagttaaataacaaacaacaacataggtagtatac---aacagcatgacataattatatcaaattcaattcatcaac 21778784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 211 - 266
Target Start/End: Complemental strand, 14103104 - 14103049
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    ||||||| |||||||  |||  ||||||||||||||||||||||| ||||||||||    
T  14103104 cccaaggatcaactcgtaacatctcgtgcgacaaagatcgcaaaaccctaaacaag 14103049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 267
Target Start/End: Complemental strand, 19154764 - 19154709
Alignment:
Q  212 ccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagc 267  Q
    |||||| |||||||  |||  ||||||||||||||||||||||| |||||||||||    
T  19154764 ccaaggatcaactcgtaacatctcgtgcgacaaagatcgcaaaaccctaaacaagc 19154709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 211 - 266
Target Start/End: Complemental strand, 20533288 - 20533233
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    ||||||| |||||||  |||  ||||||||||||||||||||||| ||||||||||    
T  20533288 cccaaggatcaactcataacatctcgtgcgacaaagatcgcaaaaccctaaacaag 20533233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 211 - 266
Target Start/End: Original strand, 23668050 - 23668105
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    ||||||| |||||||  |||  ||||||||||||||||||||||| ||||||||||    
T  23668050 cccaagggtcaactcataacatctcgtgcgacaaagatcgcaaaaccctaaacaag 23668105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 261
Target Start/End: Complemental strand, 16092221 - 16092171
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 261  Q
    |||||||||||||||| ||| ||| ||| |||| |||||||||||||||||    
T  16092221 cccaaggttcaactcttaacaacttgtgtgacacagatcgcaaaatcctaa 16092171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 257
Target Start/End: Complemental strand, 18879121 - 18879071
Alignment:
Q  207 ctatcccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatc 257  Q
    ||||||||||||||||||||| || |||||||| ||||||  |||||||||    
T  18879121 ctatcccaaggttcaactctcgacaactcgtgcaacaaaggccgcaaaatc 18879071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 261
Target Start/End: Original strand, 23648794 - 23648844
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 261  Q
    |||||||||||||||||||| |||||||| |||||| ||||| || |||||    
T  23648794 cccaaggttcaactctcaacaactcgtgcaacaaaggtcgcataaacctaa 23648844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 266
Target Start/End: Complemental strand, 17439363 - 17439330
Alignment:
Q  233 ctcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    ||||||||||||||||||||||| ||||||||||    
T  17439363 ctcgtgcgacaaagatcgcaaaaacctaaacaag 17439330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 266
Target Start/End: Original strand, 22525779 - 22525812
Alignment:
Q  233 ctcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    ||||||||||||||||||||||| ||||||||||    
T  22525779 ctcgtgcgacaaagatcgcaaaaccctaaacaag 22525812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 255
Target Start/End: Original strand, 7373011 - 7373055
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaa 255  Q
    ||||| |||||||||||||| |||||||| |||||| ||||||||    
T  7373011 cccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaa 7373055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 16199735 - 16199666
Alignment:
Q  1 tcatgcagcttagttaaataac-aacagcaacacag-tagtatacaaaaacagcatgacataataatatcaa 70  Q
    |||||||||||||||||||||| |||||||||| ||  ||||| |  ||||| |||||||||||||||||||    
T  16199735 tcatgcagcttagttaaataacaaacagcaacatagacagtattc--aaacaacatgacataataatatcaa 16199666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 17267031 - 17266991
Alignment:
Q  52 catgacataataatatcaaatgcaaatcaacaacgtctcaa 92  Q
    ||||| |||| ||||||||||||||||||||||| ||||||    
T  17267031 catgatataacaatatcaaatgcaaatcaacaacatctcaa 17266991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 17439544 - 17439504
Alignment:
Q  52 catgacataataatatcaaatgcaaatcaacaacgtctcaa 92  Q
    ||||| |||| ||||||||||||||||||||||| ||||||    
T  17439544 catgatataacaatatcaaatgcaaatcaacaacatctcaa 17439504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 37116431 - 37116471
Alignment:
Q  52 catgacataataatatcaaatgcaaatcaacaacgtctcaa 92  Q
    ||||| |||| ||||||||||||||||||||||| ||||||    
T  37116431 catgatataacaatatcaaatgcaaatcaacaacatctcaa 37116471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 40492890 - 40492850
Alignment:
Q  52 catgacataataatatcaaatgcaaatcaacaacgtctcaa 92  Q
    ||||| |||| ||||||||||||||||||||||| ||||||    
T  40492890 catgatataacaatatcaaatgcaaatcaacaacatctcaa 40492850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 105; Significance: 2e-52; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 24275198 - 24275314
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  24275198 tcatgcagcttagttaaataacaacagcaacacagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 24275297  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  24275298 atataattcaagtaatg 24275314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 456348 - 456464
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  456348 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 456447  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  456448 atataattcaagtaatg 456464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 11393422 - 11393306
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  11393422 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 11393323  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  11393322 atataattcaagtaatg 11393306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 11972523 - 11972639
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  11972523 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 11972622  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  11972623 atataattcaagtaatg 11972639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 14949257 - 14949141
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  14949257 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 14949158  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  14949157 atataattcaagtaatg 14949141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 15376848 - 15376732
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  15376848 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 15376749  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  15376748 atataattcaagtaatg 15376732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 16232547 - 16232663
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  16232547 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 16232646  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  16232647 atataattcaagtaatg 16232663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 18640299 - 18640415
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  18640299 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 18640398  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  18640399 atataattcaagtaatg 18640415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 20385258 - 20385142
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  20385258 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 20385159  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  20385158 atataattcaagtaatg 20385142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 21189730 - 21189614
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  21189730 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 21189631  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  21189630 atataattcaagtaatg 21189614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 27216887 - 27217003
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  27216887 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 27216986  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  27216987 atataattcaagtaatg 27217003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 32125518 - 32125634
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  32125518 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 32125617  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  32125618 atataattcaagtaatg 32125634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 41522944 - 41523060
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  41522944 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 41523043  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  41523044 atataattcaagtaatg 41523060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 41525406 - 41525522
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  41525406 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 41525505  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  41525506 atataattcaagtaatg 41525522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 3386360 - 3386475
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||    
T  3386360 tcatgcagcttagttaaataacaacagcaacacaatagtatacaaaaacagcatgacatgataatatcaaatgcaagtcaacaacgtctcaattattcac 3386459  T
Q  101 atataattcaagtaat 116  Q
    ||||||||||||||||    
T  3386460 atataattcaagtaat 3386475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 16410086 - 16410201
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  16410086 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 16410185  T
Q  101 atataattcaagtaat 116  Q
    ||||||||||||||||    
T  16410186 atataattcaagtaat 16410201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 24702265 - 24702381
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  24702265 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 24702364  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  24702365 atataattcaagtaatg 24702381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 16213711 - 16213827
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||| |||||||||||| ||||||| ||    
T  16213711 tcatgcagcttagttaaataacaacagcaacacagcagtatacaaaaacaacatgacataataatatcaaatccaagtcaacaacgtcttaattattcac 16213810  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  16213811 atataattcaagtaatg 16213827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 44116536 - 44116652
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  44116536 tcatgcagcttggttaaataacaacagcaacacagcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 44116635  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||| ||||    
T  44116636 atataattcaagcaatg 44116652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 13647355 - 13647472
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||||||| ||  ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |    
T  13647355 tcatgcagcttagttaaataacaacagcaacataggcagtatgcaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattca 13647454  T
Q  100 catataattcaagtaatg 117  Q
    ||||||||||||||||||    
T  13647455 catataattcaagtaatg 13647472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 18430739 - 18430855
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||| ||||||| ||||||||||||||||||||||||| |||||||| ||||||||||| ||    
T  18430739 tcatgcagcttagttaaataacaacagcaacacaacagtatataaaaacatcatgacataataatatcaaatgcaagtcaacaacatctcaattattcac 18430838  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  18430839 atataattcaagtaatg 18430855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 24704715 - 24704828
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||    |||||||||||||||||||||| |||||||||||||||||||| ||    
T  24704715 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacaa---gacataataatatcaaatgcaagtcaacaacgtctcaattattcac 24704811  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  24704812 atataattcaagtaatg 24704828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 13869373 - 13869470
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaa-caacgtctcaattatt 97  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  13869373 tcatgcagcttagttaaataacaacagcgacacagtagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattatt 13869470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 17062050 - 17061934
Alignment:
Q  1 tcatgcagcttagttaaataacaa-cagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||| ||||||| ||| |||||||||||  ||||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  17062050 tcatgcagcttagttaaataacaatcagcaactcagcagtatacaaaat-agcatgacataataatatcaaatgcaagtcagcaacgtctcaattattaa 17061952  T
Q  100 catataattcaagtaatg 117  Q
    ||||||||||||||||||    
T  17061951 catataattcaagtaatg 17061934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 12756802 - 12756690
Alignment:
Q  5 gcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttacatat 104  Q
    |||| |||||||||||||||||||||||||  | |||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||| |||||     
T  12756802 gcagtttagttaaataacaacagcaacacaacaatatacaaaaacaacatgacataataatatcaaatgcaagtaaacaacgtctcaattattcacataa 12756703  T
Q  105 aattcaagtaatg 117  Q
    |||||||||||||    
T  12756702 aattcaagtaatg 12756690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 13831400 - 13831496
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatt 97  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||    
T  13831400 tcatgcagcttagttaaataacaacaacaacacggtagtatacaaaaacaacatgacataataatataaaatgcaagtcaacaacgtctcaattatt 13831496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 38898512 - 38898395
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaa-caacgtctcaattattta 99  Q
    |||||||||||||||||||||||||| | |||||| |||||| ||||||||||||||||||||||||||||||||| |||| |||| ||||||||||| |    
T  38898512 tcatgcagcttagttaaataacaacaacgacacagcagtatataaaaacagcatgacataataatatcaaatgcaagtcaatcaacatctcaattattca 38898413  T
Q  100 catataattcaagtaatg 117  Q
    || ||||||||| |||||    
T  38898412 caaataattcaattaatg 38898395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 48273421 - 48273512
Alignment:
Q  3 atgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaat 93  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  48273421 atgcagcttagttaaataacaacagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaat 48273512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 20110583 - 20110689
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||    
T  20110583 tcatgcagcttagttaaataacaacagc----------tatacaaaaacagcatgacataataatatcaaatgcaagtcaataacgtctcaattattcac 20110672  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  20110673 atataattcaagtaatg 20110689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 26356082 - 26356002
Alignment:
Q  37 agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttacatataattcaagtaatg 117  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  26356082 agtatacaaaaacagcataacataataatatcaaatgcaagtcaacaacgtctcaattattcacatataattcaagtaatg 26356002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 26358534 - 26358454
Alignment:
Q  37 agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttacatataattcaagtaatg 117  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  26358534 agtatacaaaaacagcataacataataatatcaaatgcaagtcaacaacgtctcaattattcacatataattcaagtaatg 26358454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 3564455 - 3564338
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||||||| ||  |||||||||||||| |||||||||||||||||||||| || |||||||| ||||||||||  |    
T  3564455 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacaacatgacataataatatcaaatgtaagtcaacaacatctcaattataca 3564356  T
Q  100 catataattcaagtaatg 117  Q
       |||||||||||||||    
T  3564355 ttcataattcaagtaatg 3564338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 211 - 266
Target Start/End: Complemental strand, 12756596 - 12756541
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12756596 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 12756541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 211 - 270
Target Start/End: Complemental strand, 17061840 - 17061781
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 270  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17061840 cccatggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 17061781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 12698861 - 12698979
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacaca-gtagtatacaaaa-acagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattt 98  Q
    |||||||||||||||||||||||||||||||| | | ||||||||||| ||||||||||||||||||||||| ||||| ||| |||| ||| || ||||     
T  12698861 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaacacagcatgacataataatatcaattgcaattcatcaacatcttaaatattc 12698960  T
Q  99 acatataattcaagtaatg 117  Q
    | ||||  |||||||||||    
T  12698961 aaatattcttcaagtaatg 12698979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 9509219 - 9509336
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    ||||||||||||||||||||||||||| |||| ||  ||||||||| |||||||||||||||||||||||| ||||| ||| |||| ||| || |||| |    
T  9509219 tcatgcagcttagttaaataacaacagtaacataggcagtatacaataacagcatgacataataatatcaattgcaattcatcaacatcttaaatattca 9509318  T
Q  100 catataattcaagtaatg 117  Q
     ||||  |||||||||||    
T  9509319 aatattcttcaagtaatg 9509336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 10589069 - 10589154
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaac 85  Q
    |||||||||||||||||||||||||||||||| | | |||||||||||||| ||||||||||| ||||||| ||||| ||||||||    
T  10589069 tcatgcagcttagttaaataacaacagcaacatatgcagtatacaaaaacaacatgacataatcatatcaattgcaattcaacaac 10589154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 38227511 - 38227595
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaac 85  Q
    |||||||||||||||||||||||| ||||||| ||  ||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  38227511 tcatgcagcttagttaaataacaatagcaacataggcagtatacaaaa-cagcatgacataataatatcaaatgcaagtcaacaac 38227595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 211 - 270
Target Start/End: Complemental strand, 2279998 - 2279939
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 270  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  2279998 cccaaggttcaactctcaacaactcgtgtgacaaagatcgcaaaatcctaaacaagcatt 2279939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 18456503 - 18456387
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||| | ||||||| ||  ||||||||||| || ||||||||||||||||||||||||| |||||||| ||| || |||| |    
T  18456503 tcatgcagcttagttaaataacgatagcaacataggcagtatacaaaa-caacatgacataataatatcaaatgcaagtcaacaacatcttaaatattca 18456405  T
Q  100 catataattcaagtaatg 117  Q
      |||| |||||||||||    
T  18456404 attatacttcaagtaatg 18456387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 26212034 - 26212111
Alignment:
Q  9 cttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaac 85  Q
    |||||||||||||||||||||||| ||  ||||||||||| |||||||||||||||||||||| ||||| ||||||||    
T  26212034 cttagttaaataacaacagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaac 26212111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 116
Target Start/End: Complemental strand, 2280165 - 2280094
Alignment:
Q  45 aaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttacatataattcaagtaat 116  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||| |||| | ||||||||||| ||||    
T  2280165 aaaacagcatgatataataatatcaaatgcaaatcaacaacatctcaaatattcatatataattcaaataat 2280094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 218 - 270
Target Start/End: Complemental strand, 12255664 - 12255612
Alignment:
Q  218 ttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 270  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  12255664 ttcaactctcaacaactcgtgtgacaaagatcgcaaaatcctaaacaagcatt 12255612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 15144128 - 15144037
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaa 92  Q
    ||||||||||||||||||||||||||||||||    ||||| ||| ||||||| || || ||||||||||||||||  ||||||| ||||||    
T  15144128 tcatgcagcttagttaaataacaacagcaacatctcagtatgcaataacagcaagatatcataatatcaaatgcaagccaacaacatctcaa 15144037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 211 - 263
Target Start/End: Original strand, 44116746 - 44116798
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaac 263  Q
    ||||||||||||| ||||||||||||||| | |||||||||||||||||||||    
T  44116746 cccaaggttcaaccctcaacgactcgtgcaataaagatcgcaaaatcctaaac 44116798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 9751435 - 9751390
Alignment:
Q  207 ctatcccaaggttcaactctcaacgactcgtgcgacaaagatcgca 252  Q
    |||||||||||||||||||  ||| |||||||||||||||||||||    
T  9751435 ctatcccaaggttcaactcataacaactcgtgcgacaaagatcgca 9751390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 266
Target Start/End: Complemental strand, 15008375 - 15008323
Alignment:
Q  214 aaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    ||||||||||||  |||  ||||||||||||||||||||||| ||||||||||    
T  15008375 aaggttcaactcataacatctcgtgcgacaaagatcgcaaaaccctaaacaag 15008323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 22072944 - 22073036
Alignment:
Q  2 catgcagcttagttaaataacaa-cagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaa 92  Q
    ||||||||||||||||||||||| || ||||| ||  | ||| ||||| |||||||| |||| ||||||||||| || |||||||| ||||||    
T  22072944 catgcagcttagttaaataacaaacaacaacataggcactatgcaaaaccagcatgatataacaatatcaaatgtaagtcaacaacatctcaa 22073036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 211 - 266
Target Start/End: Complemental strand, 9033225 - 9033170
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    ||||||| |||||||  |||  ||||||||||||||||||||||| ||||||||||    
T  9033225 cccaagggtcaactcataacatctcgtgcgacaaagatcgcaaaaccctaaacaag 9033170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 211 - 266
Target Start/End: Original strand, 14036439 - 14036494
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    ||||||| |||||||  |||  ||||||||||||||||||||||| ||||||||||    
T  14036439 cccaaggatcaactcataacatctcgtgcgacaaagatcgcaaaaccctaaacaag 14036494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 211 - 266
Target Start/End: Original strand, 14044989 - 14045044
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    ||||||| |||||||  |||  ||||||||||||||||||||||| ||||||||||    
T  14044989 cccaaggatcaactcataacatctcgtgcgacaaagatcgcaaaaccctaaacaag 14045044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 211 - 266
Target Start/End: Original strand, 14346469 - 14346524
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    ||||||| |||||||  |||  ||||||||||||||||||||||| ||||||||||    
T  14346469 cccaaggatcaactcataacatctcgtgcgacaaagatcgcaaaaccctaaacaag 14346524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 211 - 266
Target Start/End: Original strand, 14355019 - 14355074
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    ||||||| |||||||  |||  ||||||||||||||||||||||| ||||||||||    
T  14355019 cccaaggatcaactcataacatctcgtgcgacaaagatcgcaaaaccctaaacaag 14355074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 261
Target Start/End: Complemental strand, 3564244 - 3564194
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 261  Q
    ||||||||| |||||| ||| |||||||| |||||| ||||||||||||||    
T  3564244 cccaaggttaaactcttaacaactcgtgcaacaaaggtcgcaaaatcctaa 3564194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 257
Target Start/End: Original strand, 9509426 - 9509476
Alignment:
Q  207 ctatcccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatc 257  Q
    ||||||||||||||||||||| || |||| ||| |||||| ||||||||||    
T  9509426 ctatcccaaggttcaactctcgacaactcttgcaacaaaggtcgcaaaatc 9509476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 16056403 - 16056449
Alignment:
Q  46 aaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaa 92  Q
    ||||| ||||| |||| ||||||||||||||||||||||| ||||||    
T  16056403 aaacaacatgatataacaatatcaaatgcaaatcaacaacatctcaa 16056449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 261
Target Start/End: Original strand, 38227721 - 38227771
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 261  Q
    |||||||||||||||| ||| |||||||| |||||| |||||||| |||||    
T  38227721 cccaaggttcaactcttaacaactcgtgcaacaaaggtcgcaaaaacctaa 38227771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 266
Target Start/End: Complemental strand, 9177523 - 9177490
Alignment:
Q  233 ctcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    ||||||||||||||||||||||| ||||||||||    
T  9177523 ctcgtgcgacaaagatcgcaaaaccctaaacaag 9177490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 40443424 - 40443490
Alignment:
Q  4 tgcagcttagttaaataac-aacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaa 70  Q
    ||||||||||||||||||| |||||||||| | | |||| ||  |||||||||||||||||||||||||    
T  40443424 tgcagcttagttaaataacaaacagcaacatacgcagtaaac--aaacagcatgacataataatatcaa 40443490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1439 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold1439
Description:

Target: scaffold1439; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 135 - 249
Alignment:
Q  3 atgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttacat 102  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  135 atgcagcttagttaaataacaacagcaacacaatagtatacaaaaacaacatgacataataatatcaaatgcaaatcaacaacgtctcaattattcacat 234  T
Q  103 ataattcaagtaatg 117  Q
    |||||||||||||||    
T  235 ataattcaagtaatg 249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 4324 - 4440
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| | ||    
T  4324 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacaacatgacataataatatcaattgcaaatcaacaacgtctcaattaatcac 4423  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  4424 atataattcaagtaatg 4440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 4721 - 4837
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  4721 tcatgcagcttagttaaataacaacagcaacacagcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 4820  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  4821 atataattcaagtaatg 4837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 13419 - 13535
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  13419 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 13518  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  13519 atataattcaagtaatg 13535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 20774 - 20890
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  20774 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 20873  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  20874 atataattcaagtaatg 20890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 37848 - 37964
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  37848 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 37947  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  37948 atataattcaagtaatg 37964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 101; Significance: 4e-50; HSPs: 4)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 17575 - 17459
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  17575 tcatgcagcttagttaaataacaatagcaacacagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 17476  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  17475 atataattcaagtaatg 17459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 94438 - 94554
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  94438 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 94537  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  94538 atataattcaagtaatg 94554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 44481 - 44598
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaa-acagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||| |    
T  44481 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaattattca 44580  T
Q  100 catataattcaagtaatg 117  Q
    ||||||||||||||||||    
T  44581 catataattcaagtaatg 44598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 100404 - 100507
Alignment:
Q  1 tcatgcagcttagttaaataacaa-cagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattt 98  Q
    |||||||||||||||||||||||| |||||||| ||  ||||| ||||  || ||||| ||||||||||| |||||||||||||||| |||||| ||||     
T  100404 tcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaat-catcatgatataataatatcgaatgcaaatcaacaacatctcaaatatta 100502  T
Q  99 acata 103  Q
    |||||    
T  100503 acata 100507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 101; Significance: 4e-50; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 158585 - 158469
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  158585 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 158486  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  158485 atataattcaagtaatg 158469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 340038 - 339924
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    ||||||||||||||||||||||| || ||||| ||  ||||||||||| || ||||||||||||||||||||| ||| |||||||| |||||| |||  |    
T  340038 tcatgcagcttagttaaataaca-caacaacataggcagtatacaaaa-caacatgacataataatatcaaat-caagtcaacaacatctcaagtataca 339942  T
Q  100 catataattcaagtaatg 117  Q
       |||||||||||||||    
T  339941 ttcataattcaagtaatg 339924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 255
Target Start/End: Complemental strand, 339830 - 339786
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaa 255  Q
    ||||||||||||| || |||||||||||| |||||| ||||||||    
T  339830 cccaaggttcaacccttaacgactcgtgcaacaaaggtcgcaaaa 339786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 101; Significance: 4e-50; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 264903 - 264787
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  264903 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 264804  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  264803 atataattcaagtaatg 264787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 10733075 - 10732959
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  10733075 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 10732976  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  10732975 atataattcaagtaatg 10732959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 39363411 - 39363527
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  39363411 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 39363510  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  39363511 atataattcaagtaatg 39363527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 20909039 - 20909155
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    |||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  20909039 tcatgcagcttagttaaataacaaaagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 20909138  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  20909139 atataattcaagtaatg 20909155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 29329961 - 29330077
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  29329961 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 29330060  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  29330061 atataattcaagtaatg 29330077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 42245500 - 42245384
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  42245500 tcatgcaacttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 42245401  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  42245400 atataattcaagtaatg 42245384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 20902144 - 20902027
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattt-a 99  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |    
T  20902144 tcatgcagcttagttaaataacaacagcaacacagcagtatacaaaaacagcatgacataataatatcaagtgcaagtcaacaacgtctcaattatttca 20902045  T
Q  100 catataattcaagtaatg 117  Q
    |||||||||||| |||||    
T  20902044 catataattcaaataatg 20902027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 29346007 - 29346123
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    |||| |||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  29346007 tcatacagcttagttaaataacaacagcatcacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 29346106  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  29346107 atataattcaagtaatg 29346123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 39245163 - 39245279
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||| ||    
T  39245163 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaataacgtcccaattattcac 39245262  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  39245263 atataattcaagtaatg 39245279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 36154915 - 36154802
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  36154915 tcatgcagcttagttaaataacaaca---acacagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 36154819  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  36154818 atataattcaagtaatg 36154802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 18319169 - 18319052
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaa-caacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |    
T  18319169 tcatgcagcttagttaaataacaacagcgacacagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 18319070  T
Q  100 catataattcaagtaatg 117  Q
    |||||||||||| |||||    
T  18319069 catataattcaattaatg 18319052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 11581334 - 11581218
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||| ||    
T  11581334 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacaacatgacataataatatcaaatgcaagtcaataacgtctcaattattcac 11581235  T
Q  101 atataattcaagtaatg 117  Q
     ||||||||||||||||    
T  11581234 gtataattcaagtaatg 11581218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 29348480 - 29348596
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    |||| |||||||||||||||| ||||||| ||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  29348480 tcatacagcttagttaaataagaacagcatcacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 29348579  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  29348580 atataattcaagtaatg 29348596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 29350953 - 29351069
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    |||| |||||||||||||||| ||||||| ||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  29350953 tcatacagcttagttaaataagaacagcatcacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 29351052  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  29351053 atataattcaagtaatg 29351069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 2154749 - 2154632
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattt-a 99  Q
    |||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |    
T  2154749 tcatgcagcttagttaaataacaatagcaacacaacagtatacaaaaacagcatgacataataatatcaactgcaagtcaacaacgtctcaattatttca 2154650  T
Q  100 catataattcaagtaatg 117  Q
    |||||||||||| |||||    
T  2154649 catataattcaaataatg 2154632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 117
Target Start/End: Original strand, 32027428 - 32027536
Alignment:
Q  9 cttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttacatataatt 108  Q
    |||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||    
T  32027428 cttagttaaataacaacaacaacacaacagtatacaaaaacagcatgacataataatatcaaatccaagtcaacaacgtctcaattattcacatataatt 32027527  T
Q  109 caagtaatg 117  Q
    |||||||||    
T  32027528 caagtaatg 32027536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 38619461 - 38619568
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaa-caacgtctcaattattta 99  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |    
T  38619461 tcatgcagcttagttaaataacaacaacgacacagtagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 38619560  T
Q  100 catataat 107  Q
    || |||||    
T  38619561 cagataat 38619568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 10775811 - 10775694
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaa-caacgtctcaattattta 99  Q
    |||||||||||||||||||||| ||||| |||||| |||||| |||| |||||||||||||||||||||||||||| |||| |||||||||||||||| |    
T  10775811 tcatgcagcttagttaaataacgacagcgacacagcagtatataaaaccagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 10775712  T
Q  100 catataattcaagtaatg 117  Q
    |||||||||||| |||||    
T  10775711 catataattcaattaatg 10775694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 31061095 - 31061212
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaa-caacgtctcaattattta 99  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||| |    
T  31061095 tcatgcaacttagttaaataacaacagcaaaacagtagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtatcaattattca 31061194  T
Q  100 catataattcaagtaatg 117  Q
    || |||||| || |||||    
T  31061195 caaataatttaattaatg 31061212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 23064538 - 23064645
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaa-caacgtctcaattattta 99  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||| |    
T  23064538 tcatgcagcttagttaaataacaacaacgacacagtagtatacaaaaacagcatgacctaataatatcaaatgcaagtcaatcaacgtctcaattattca 23064637  T
Q  100 catataat 107  Q
    || |||||    
T  23064638 cagataat 23064645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 24067136 - 24067251
Alignment:
Q  3 atgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaa-caacgtctcaattatttaca 101  Q
    ||||||||| |||||||||||||||| |||||  |||||||||||||| ||||||||||||||||||||||||| |||| || ||||||||||||| |||    
T  24067136 atgcagcttggttaaataacaacagcgacacaacagtatacaaaaacaacatgacataataatatcaaatgcaagtcaatcatcgtctcaattattcaca 24067235  T
Q  102 tataattcaagtaatg 117  Q
    |||||||||| |||||    
T  24067236 tataattcaattaatg 24067251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 20918083 - 20917973
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||| ||    || |||||||||||||||||||| ||    
T  20918083 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacaaaataatataaa----aagtcaacaacgtctcaattattcac 20917988  T
Q  101 atataattcaagtaa 115  Q
    || ||||||||||||    
T  20917987 atctaattcaagtaa 20917973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 1096497 - 1096588
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacag-tagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctca 91  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||| ||| |||||||||||||||||||||||||||||| |||||    
T  1096497 tcatgcagcttagttaaataacaacagcaacacaggtagtatgcaaaaacaacataacataataatatcaaatgcaaatcaacaacatctca 1096588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 9077983 - 9078078
Alignment:
Q  2 catgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattat 96  Q
    ||||||||||||||||||||||||||||||| ||  ||||||| |||||||||||||||||||||||||| ||||| |||||||| ||||||||||    
T  9077983 catgcagcttagttaaataacaacagcaacataggcagtatacgaaaacagcatgacataataatatcaagtgcaagtcaacaacatctcaattat 9078078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 211 - 270
Target Start/End: Complemental strand, 36154708 - 36154649
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36154708 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 36154649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 21729155 - 21729070
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaac 85  Q
    |||||||||||||||||||||||||||||||| ||  ||||||||||| |||||||||||||||||||||| ||||| ||||||||    
T  21729155 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaac 21729070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 21808480 - 21808395
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaac 85  Q
    |||||||||||||||||||||||||||||||| ||  ||||||||||| |||||||||||||||||||||| ||||| ||||||||    
T  21808480 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaac 21808395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 23390587 - 23390470
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||| ||||| ||| |||| ||| || |||| |    
T  23390587 tcatgcagcttagttaaataacaacagcaacatagacagtatacaaaaacaacatgacataataatatcaattgcaattcatcaacatcttaaatattca 23390488  T
Q  100 catataattcaagtaatg 117  Q
     ||||  |||||||||||    
T  23390487 aatattcttcaagtaatg 23390470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 21997625 - 21997549
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaa 76  Q
    |||||||||||||||||||||||||||||||| ||  |||||||||||||| |||||||||||||||||||||||||    
T  21997625 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacaacatgacataataatatcaaatgcaa 21997549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 24529250 - 24529346
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattat 96  Q
    |||||||||||||||||||||||||| ||||| ||  |||||||||||||| ||||||||||| ||||||||||||| |||||||| ||| ||||||    
T  24529250 tcatgcagcttagttaaataacaacaacaacataggcagtatacaaaaacaacatgacataatgatatcaaatgcaagtcaacaacatcttaattat 24529346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 211 - 270
Target Start/End: Complemental strand, 11581125 - 11581066
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 270  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  11581125 cccaaggttcaactctcaacgactcgtacgacaaagatcgcaaaatcctaaacaagcatt 11581066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 212 - 270
Target Start/End: Original strand, 22144292 - 22144350
Alignment:
Q  212 ccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 270  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  22144292 ccaaggttcaactctcaacaactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 22144350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 25421562 - 25421679
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||||| ||||| ||  |||||||||||||| ||||||||||||||||||| ||||| |||||| | ||| || |||| |    
T  25421562 tcatgcagcttagttaaataacaacaacaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtcaacagcatcttaaatattca 25421661  T
Q  100 catataattcaagtaatg 117  Q
      |||| |||||||||||    
T  25421662 attatacttcaagtaatg 25421679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 25431424 - 25431509
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaac 85  Q
    ||||||| |||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||| ||||| ||||||||    
T  25431424 tcatgcatcttagttaaataacaacagcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtcaacaac 25431509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 8286934 - 8286848
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacaca-gtagtatac-aaaaacagcatgacataataatatcaaatgcaaatcaacaac 85  Q
    |||||||||||||||||||||||||||||||| | | ||||||| ||||||||||||||||||||||||||| ||||| ||| ||||    
T  8286934 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaaacagcatgacataataatatcaattgcaattcatcaac 8286848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 22075049 - 22075134
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagta-gtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaac 85  Q
    |||| ||||||||||||||||||||||||||| || | |||||||||| || ||||||||||||||||||| ||||| ||||||||    
T  22075049 tcattcagcttagttaaataacaacagcaacataggaagtatacaaaatcaacatgacataataatatcaattgcaattcaacaac 22075134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 22144079 - 22144196
Alignment:
Q  1 tcatgcagcttagttaaataaca-acagcaacacag-tagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattt 98  Q
    ||||||||||||||||||||||| ||| ||||| || |||||| ||||| || ||||| |||| |||||||| |||||||||||||| ||||||  |||     
T  22144079 tcatgcagcttagttaaataacagacatcaacataggtagtatgcaaaa-caacatgatataacaatatcaattgcaaatcaacaacatctcaaacattc 22144177  T
Q  99 acatataattcaagtaatg 117  Q
    | |||||||||||||||||    
T  22144178 atatataattcaagtaatg 22144196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 24493599 - 24493683
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaac 85  Q
    ||||||||||| ||||| |||||| ||||||| ||  ||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  24493599 tcatgcagcttggttaagtaacaatagcaacataggcagtatacaaaa-cagcatgacataataatatcaaatgcaagtcaacaac 24493683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 22412214 - 22412305
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaa 92  Q
    ||||| |||||||||||||||| | | ||||| ||  ||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||    
T  22412214 tcatgtagcttagttaaataacgataacaacataggcagtatacaaaa-cagcatgacataataatatcaaatgcaagtcaacaacatctcaa 22412305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 13025341 - 13025425
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaac 85  Q
    ||||||||| |||||||||||||| ||||||| ||  ||||||||||| |||||||||||| | ||||||||||||| ||||||||    
T  13025341 tcatgcagcatagttaaataacaatagcaacataggcagtatacaaaa-cagcatgacatattgatatcaaatgcaagtcaacaac 13025425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 13095525 - 13095609
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaac 85  Q
    ||||||||| |||||||||||||| ||||||| ||  ||||||||||| |||||||||||| | ||||||||||||| ||||||||    
T  13095525 tcatgcagcatagttaaataacaatagcaacataggcagtatacaaaa-cagcatgacatattgatatcaaatgcaagtcaacaac 13095609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 20766166 - 20766119
Alignment:
Q  45 aaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaa 92  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||    
T  20766166 aaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaa 20766119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 211 - 261
Target Start/End: Original strand, 13095735 - 13095785
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 261  Q
    ||||||||||||||||||||||||||||| |||||| |||||||| |||||    
T  13095735 cccaaggttcaactctcaacgactcgtgcaacaaaggtcgcaaaaacctaa 13095785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 211 - 261
Target Start/End: Original strand, 25421773 - 25421823
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 261  Q
    |||||||||||||||||||| |||||||| |||||| ||||||||||||||    
T  25421773 cccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaa 25421823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 21293060 - 21292992
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaa 70  Q
    |||||||||||||||||||||||||||||||| | | |||| ||  |||||| ||||||||||||||||||    
T  21293060 tcatgcagcttagttaaataacaacagcaacataggcagtaaac--aaacagtatgacataataatatcaa 21292992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 261
Target Start/End: Complemental strand, 21986027 - 21985977
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 261  Q
    |||||||||||||||||||| |||||||| |||||| |||||||| |||||    
T  21986027 cccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaa 21985977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 261
Target Start/End: Original strand, 24493809 - 24493859
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 261  Q
    |||||||||||||||||||| |||||||| |||||| |||||||| |||||    
T  24493809 cccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaa 24493859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 22120078 - 22120033
Alignment:
Q  207 ctatcccaaggttcaactctcaacgactcgtgcgacaaagatcgca 252  Q
    |||||||||||||||||||  ||| |||||||||||||||||||||    
T  22120078 ctatcccaaggttcaactcataacaactcgtgcgacaaagatcgca 22120033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 25431637 - 25431685
Alignment:
Q  213 caaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 261  Q
    |||||||||||||||||| |||||||  |||||| ||||||||||||||    
T  25431637 caaggttcaactctcaacaactcgtgtaacaaaggtcgcaaaatcctaa 25431685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 37723933 - 37724048
Alignment:
Q  1 tcatgcagcttagttaaataaca-acagcaacaca-gtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattt 98  Q
    ||||||||||||||||||||||| ||||||||| | | |||||||   ||||||||||||| || |||||||||  || ||| |||| ||||||| |||     
T  37723933 tcatgcagcttagttaaataacagacagcaacataggcagtatac---aacagcatgacatgattatatcaaattaaattcatcaacatctcaatcattc 37724029  T
Q  99 acatataattcaagtaatg 117  Q
    |   |||||||||||||||    
T  37724030 attcataattcaagtaatg 37724048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 261
Target Start/End: Original strand, 9078193 - 9078243
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 261  Q
    ||||||||||||| || ||| ||| |||||||| |||||||||||||||||    
T  9078193 cccaaggttcaacccttaacaacttgtgcgacacagatcgcaaaatcctaa 9078243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 261
Target Start/End: Original strand, 13025551 - 13025601
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 261  Q
    |||||||||||||||||||| | |||||| |||||| |||||||| |||||    
T  13025551 cccaaggttcaactctcaacaaatcgtgcaacaaaggtcgcaaaaacctaa 13025601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 257
Target Start/End: Complemental strand, 23390380 - 23390330
Alignment:
Q  207 ctatcccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatc 257  Q
    ||||||||||||||||||||| || |||||||| |||||| || |||||||    
T  23390380 ctatcccaaggttcaactctcgacaactcgtgcaacaaaggtcacaaaatc 23390330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 261
Target Start/End: Original strand, 24529461 - 24529511
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 261  Q
    |||||||||||||||||||| ||| |||| |||||| |||||||| |||||    
T  24529461 cccaaggttcaactctcaactactagtgcaacaaaggtcgcaaaaacctaa 24529511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 249
Target Start/End: Complemental strand, 24767222 - 24767180
Alignment:
Q  207 ctatcccaaggttcaactctcaacgactcgtgcgacaaagatc 249  Q
    |||||||||||||||||||  ||| ||||||||||||||||||    
T  24767222 ctatcccaaggttcaactcataacaactcgtgcgacaaagatc 24767180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 266
Target Start/End: Complemental strand, 21328072 - 21328039
Alignment:
Q  233 ctcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    ||||||||||||||||||||||| ||||||||||    
T  21328072 ctcgtgcgacaaagatcgcaaaaccctaaacaag 21328039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 29448086 - 29448126
Alignment:
Q  52 catgacataataatatcaaatgcaaatcaacaacgtctcaa 92  Q
    ||||| |||| ||||||||||||||||||||||| ||||||    
T  29448086 catgatataacaatatcaaatgcaaatcaacaacatctcaa 29448126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 101; Significance: 4e-50; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 18808970 - 18809086
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  18808970 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 18809069  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  18809070 atataattcaagtaatg 18809086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 23130889 - 23131005
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  23130889 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 23130988  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  23130989 atataattcaagtaatg 23131005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 23133356 - 23133472
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  23133356 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 23133455  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  23133456 atataattcaagtaatg 23133472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 23135617 - 23135733
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  23135617 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 23135716  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  23135717 atataattcaagtaatg 23135733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 23709667 - 23709551
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  23709667 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 23709568  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  23709567 atataattcaagtaatg 23709551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 23712148 - 23712032
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  23712148 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 23712049  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  23712048 atataattcaagtaatg 23712032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 24367801 - 24367917
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  24367801 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 24367900  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  24367901 atataattcaagtaatg 24367917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 26505406 - 26505522
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  26505406 tcatgcagcttagttaaataacaacagcaacacagcagtatacaaaaatagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 26505505  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  26505506 atataattcaagtaatg 26505522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 26507884 - 26508000
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  26507884 tcatgcagcttagttaaataacaacagcaacacagcagtatacaaaaatagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 26507983  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  26507984 atataattcaagtaatg 26508000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 32215056 - 32214940
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  32215056 tcatgcagcttagttaaataacaacaacaacacagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 32214957  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  32214956 atataattcaagtaatg 32214940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 34402657 - 34402541
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  34402657 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 34402558  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  34402557 atataattcaagtaatg 34402541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 39682340 - 39682456
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  39682340 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 39682439  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  39682440 atataattcaagtaatg 39682456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 571424 - 571540
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||    
T  571424 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattgttcac 571523  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  571524 atataattcaagtaatg 571540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 6726022 - 6726138
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||    
T  6726022 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgtaagtcaacaacgtctcaattattcac 6726121  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  6726122 atataattcaagtaatg 6726138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 21155195 - 21155079
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||    
T  21155195 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaattgcaagtcaacaacgtctcaattattcac 21155096  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  21155095 atataattcaagtaatg 21155079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 32039633 - 32039517
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  32039633 tcatgcagcttagttaaataacaacagtaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 32039534  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  32039533 atataattcaagtaatg 32039517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 43137326 - 43137442
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| || ||    
T  43137326 tcatgcagcttagttaaataacaacagcaacacagtaatatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacgtctcaattgttcac 43137425  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  43137426 atataattcaagtaatg 43137442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 24898331 - 24898214
Alignment:
Q  1 tcatgcagctt-agttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    ||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |    
T  24898331 tcatgcagctttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattca 24898232  T
Q  100 catataattcaagtaatg 117  Q
    ||||||||||||||||||    
T  24898231 catataattcaagtaatg 24898214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 24900814 - 24900697
Alignment:
Q  1 tcatgcagctt-agttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    ||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |    
T  24900814 tcatgcagctttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattca 24900715  T
Q  100 catataattcaagtaatg 117  Q
    ||||||||||||||||||    
T  24900714 catataattcaagtaatg 24900697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 24903291 - 24903174
Alignment:
Q  1 tcatgcagctt-agttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    ||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |    
T  24903291 tcatgcagctttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattca 24903192  T
Q  100 catataattcaagtaatg 117  Q
    ||||||||||||||||||    
T  24903191 catataattcaagtaatg 24903174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 24905768 - 24905651
Alignment:
Q  1 tcatgcagctt-agttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    ||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |    
T  24905768 tcatgcagctttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattca 24905669  T
Q  100 catataattcaagtaatg 117  Q
    ||||||||||||||||||    
T  24905668 catataattcaagtaatg 24905651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 24908243 - 24908126
Alignment:
Q  1 tcatgcagctt-agttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    ||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |    
T  24908243 tcatgcagctttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattca 24908144  T
Q  100 catataattcaagtaatg 117  Q
    ||||||||||||||||||    
T  24908143 catataattcaagtaatg 24908126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 28577126 - 28577242
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||| ||  |||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||| ||    
T  28577126 tcatgcagcttagttaaataacaacagcaacgcaacagtatacaaaaacagcatgatataataatatcaaatgcaagccaacaacgtctcaattattcac 28577225  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  28577226 atataattcaagtaatg 28577242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 45029989 - 45029873
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    |||||||||||||||||||||||||| |||||||  | |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  45029989 tcatgcagcttagttaaataacaacaacaacacaacaatatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 45029890  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  45029889 atataattcaagtaatg 45029873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 22105439 - 22105556
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||||||| ||  ||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |    
T  22105439 tcatgcagcttagttaaataacaacagcaacataggcagtatgcaaaaacagcatgacataataatatcaaatgcaagtcaacaacttctcaattattca 22105538  T
Q  100 catataattcaagtaatg 117  Q
    ||||||||||||||||||    
T  22105539 catataattcaagtaatg 22105556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 24529664 - 24529547
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattt-a 99  Q
    ||||||||| |||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||| |    
T  24529664 tcatgcagcatagttaaataacaacaacaacacatcagtatacaaaaacagcatgacataataatatcaagtgcaagttaacaacgtctcaattatttca 24529565  T
Q  100 catataattcaagtaatg 117  Q
     ||||||||||| |||||    
T  24529564 tatataattcaaataatg 24529547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 38967401 - 38967518
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaa-caacgtctcaattattta 99  Q
    |||||||||||||||||||||||||| | |||||  | |||||||||| ||||||| ||||||||||||||||||| |||| |||| ||||||||||| |    
T  38967401 tcatgcagcttagttaaataacaacatcgacacaacaatatacaaaaatagcatgaaataataatatcaaatgcaagtcaatcaacatctcaattattca 38967500  T
Q  100 catataattcaagtaatg 117  Q
    |||||||||||| |||||    
T  38967501 catataattcaattaatg 38967518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 22337145 - 22337262
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagta-gtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||||||||||   ||||| |||||||||||||||||||||||||||||||||  ||||||| |||||| |||  |    
T  22337145 tcatgcagcttagttaaataacaacagcaacacaggctgtatataaaaacagcatgacataataatatcaaatgcaagacaacaacatctcaaatataca 22337244  T
Q  100 catataattcaagtaatg 117  Q
       |||||||||||||||    
T  22337245 ttcataattcaagtaatg 22337262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 23060543 - 23060660
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||| ||||| |||||||| ||| || |||| |    
T  23060543 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtcaacaacatcttaaatattaa 23060642  T
Q  100 catataattcaagtaatg 117  Q
      |||| |||||||||||    
T  23060643 attatacttcaagtaatg 23060660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 23076472 - 23076589
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||| ||||| |||||||  ||| || |||| |    
T  23076472 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacaatatcttaaatattca 23076571  T
Q  100 catataattcaagtaatg 117  Q
      |||| |||||||||||    
T  23076572 attatacttcaagtaatg 23076589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 22731325 - 22731208
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||||||| ||  ||| |||||||||||||||||||||||||||||| ||||| ||| |||| | | || |||| |    
T  22731325 tcatgcagcttagttaaataacaacagcaacataggcagtttacaaaaacagcatgacataataatatcaattgcaattcatcaacatattaaatattca 22731226  T
Q  100 catataattcaagtaatg 117  Q
     ||||  |||||||||||    
T  22731225 aatattcttcaagtaatg 22731208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 211 - 270
Target Start/End: Original strand, 19672068 - 19672127
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 270  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  19672068 cccaaggttcaactctcaacaactcgtgcgacaaagatcgcaaaatcctaaacaaccatt 19672127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 211 - 270
Target Start/End: Complemental strand, 23708498 - 23708439
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 270  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  23708498 cccaaggttcaactatcaacaactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 23708439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 24642933 - 24642875
Alignment:
Q  59 taataatatcaaatgcaaatcaacaacgtctcaattatttacatataattcaagtaatg 117  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  24642933 taataatatcaaatgcaagtcaacaacgtctcaattattcacatataattcaagtaatg 24642875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 38205 - 38136
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaa 70  Q
    |||||||||||||||||||||||||||||||| | | ||||||| ||||||||||||||||||||||||||    
T  38205 tcatgcagcttagttaaataacaacagcaacataggcagtatac-aaaacagcatgacataataatatcaa 38136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 22738270 - 22738154
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||  ||    | ||| |||||||||||||||||||||||||||||| ||||| ||| |||| ||| || |||| |     
T  22738270 tcatgcagcttagttaaataacaacattaaataggcagtttacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaa 22738171  T
Q  101 atataattcaagtaatg 117  Q
    ||||  |||||||||||    
T  22738170 atattcttcaagtaatg 22738154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 24643085 - 24643034
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagc 52  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  24643085 tcatgcagcttagttaaataacaacagcaacacatcagtatacaaaaacagc 24643034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 298906 - 298820
Alignment:
Q  1 tcatgcagcttagttaaataacaa-cagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaac 85  Q
    |||||||||||||||||||||||| |||||||| ||  ||||||||||| |||||||||||||  ||||||| ||||| ||||||||    
T  298906 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaaaatcagcatgacataaatatatcaattgcaattcaacaac 298820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 23660061 - 23660137
Alignment:
Q  9 cttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaac 85  Q
    |||||||||| ||||||||||||| ||  ||||||| ||| ||| |||||||||||||||||||||||||||||||||    
T  23660061 cttagttaaacaacaacagcaacataggcagtatacgaaa-caggatgacataataatatcaaatgcaaatcaacaac 23660137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 23285895 - 23286008
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||||||| ||  |||||||||||||||    ||||||||||||||| ||||| ||| |||| ||| || |||| |    
T  23285895 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacag----acataataatatcaattgcaattcatcaacatcttaaatattca 23285990  T
Q  100 catataattcaagtaatg 117  Q
     || |  |||||||||||    
T  23285991 aatgttcttcaagtaatg 23286008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 19671860 - 19671976
Alignment:
Q  1 tcatgcagcttagttaaataacaa-cagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattt 98  Q
    ||||||||||||||||| |||||| |||||||| ||  ||||| ||||| || ||||| ||||||||||| || |||| | |||||| |||||| ||||     
T  19671860 tcatgcagcttagttaattaacaatcagcaacataggcagtatgcaaaa-catcatgatataataatatcgaacgcaagtaaacaacatctcaa-tattc 19671957  T
Q  99 acatataattcaagtaatg 117  Q
    |||||||||||||||||||    
T  19671958 acatataattcaagtaatg 19671976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 23103486 - 23103395
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaat 93  Q
    ||||||||||||||||||||| |||||||||| | | |||||||  |||||||||||||| || ||||||||| ||| ||| |||| |||||||    
T  23103486 tcatgcagcttagttaaataaaaacagcaacataggcagtatac--aaacagcatgacatgattatatcaaattcaattcatcaacatctcaat 23103395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 23654477 - 23654392
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaac 85  Q
    |||||||||||||||||||||||||| || || ||  || ||||||| ||| ||||||||||||||||||| ||||| ||| ||||    
T  23654477 tcatgcagcttagttaaataacaacaacagcataggcagcatacaaatacatcatgacataataatatcaattgcaattcatcaac 23654392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 28406006 - 28406099
Alignment:
Q  1 tcatgcagcttagttaaataacaa-cagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaa 92  Q
    ||||||| |||||||||||||||| |||||||| ||  ||||| ||||| || ||||| |||| |||||| |||||||||||||||| ||||||    
T  28406006 tcatgcaacttagttaaataacaaacagcaacataggcagtatgcaaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaa 28406099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 7824 - 7707
Alignment:
Q  1 tcatgcagcttagttaaataacaa-cagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattt 98  Q
    |||||||||||||||||  ||||| |||||||| ||  ||||| ||||| || ||||| |||| |||||||||||||| ||| |||| ||||||  |||     
T  7824 tcatgcagcttagttaataaacaaacagcaacataggcagtatgcaaaa-caacatgatataacaatatcaaatgcaagtcatcaacatctcaaacattc 7726  T
Q  99 acatataattcaagtaatg 117  Q
    | |||||||||||||||||    
T  7725 atatataattcaagtaatg 7707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 266
Target Start/End: Original strand, 23287607 - 23287659
Alignment:
Q  214 aaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    |||| ||||||| ||||  ||||||||||||||||||||||| ||||||||||    
T  23287607 aaggatcaactcacaacatctcgtgcgacaaagatcgcaaaaccctaaacaag 23287659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 23040280 - 23040249
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaaca 32  Q
    ||||||||||||||||||||||||||||||||    
T  23040280 tcatgcagcttagttaaataacaacagcaaca 23040249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 92
Target Start/End: Original strand, 23004838 - 23004872
Alignment:
Q  58 ataataatatcaaatgcaaatcaacaacgtctcaa 92  Q
    |||||||||||||||||||||||||||| ||||||    
T  23004838 ataataatatcaaatgcaaatcaacaacatctcaa 23004872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 23708706 - 23708593
Alignment:
Q  5 gcagcttagttaaataaca-acagcaacaca-gtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttacat 102  Q
    ||||||||||||||||||| | ||||||| | | ||||| | |||||| ||||| |||| |||||||| ||||||||| | || ||||||  ||| | ||    
T  23708706 gcagcttagttaaataacagatagcaacataggcagtatgc-aaaacaacatgatataacaatatcaattgcaaatcatcgacatctcaaacattcaaat 23708608  T
Q  103 ataattcaagtaatg 117  Q
    |||||||||||||||    
T  23708607 ataattcaagtaatg 23708593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 22337357 - 22337406
Alignment:
Q  212 ccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 261  Q
    ||||||||||||||||||| |||||||| |||||| || ||||| |||||    
T  22337357 ccaaggttcaactctcaacaactcgtgcaacaaaggtcacaaaaacctaa 22337406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 117
Target Start/End: Original strand, 23791357 - 23791421
Alignment:
Q  52 catgacataataatatcaaatgcaaatcaacaacgtctcaattatttacatataattcaagtaatg 117  Q
    ||||| |||| ||||||||||||||||||||||| ||||||  | ||| |||||||||| ||||||    
T  23791357 catgatataaaaatatcaaatgcaaatcaacaacatctcaaaca-ttatatataattcatgtaatg 23791421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 266
Target Start/End: Complemental strand, 18546801 - 18546769
Alignment:
Q  234 tcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    |||||||||||||||||||||| ||||||||||    
T  18546801 tcgtgcgacaaagatcgcaaaaccctaaacaag 18546769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 255
Target Start/End: Complemental strand, 22738060 - 22738016
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaa 255  Q
    |||||||||||| ||||||| |||||||| |||||| ||||||||    
T  22738060 cccaaggttcaattctcaacaactcgtgcaacaaaggtcgcaaaa 22738016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 255
Target Start/End: Original strand, 23076683 - 23076727
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaa 255  Q
    ||||| |||||||||||||| |||||||| |||||| ||||||||    
T  23076683 cccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaa 23076727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 101; Significance: 4e-50; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 13988893 - 13989009
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  13988893 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 13988992  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  13988993 atataattcaagtaatg 13989009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 21475222 - 21475106
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  21475222 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 21475123  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  21475122 atataattcaagtaatg 21475106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 21923426 - 21923310
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  21923426 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 21923327  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  21923326 atataattcaagtaatg 21923310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 23593870 - 23593754
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  23593870 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 23593771  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  23593770 atataattcaagtaatg 23593754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 21840794 - 21840910
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  21840794 tcatgcagcttagttaaataacaacagcaacacagcagtatacaaaaacatcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 21840893  T
Q  101 atataattcaagtaatg 117  Q
    |||||||| ||||||||    
T  21840894 atataatttaagtaatg 21840910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 31612340 - 31612456
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||| ||    
T  31612340 tcatgcagcttagttaaataacaacagcaacacaatagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcagttattcac 31612439  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  31612440 atataattcaagtaatg 31612456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 29298164 - 29298279
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||    
T  29298164 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatga-ataataatatcaaatgcaagtcaacaacgtctcaattattcac 29298262  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  29298263 atataattcaagtaatg 29298279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 29776715 - 29776831
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  29776715 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaataacatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 29776814  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  29776815 atataattcaagtaatg 29776831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 45574978 - 45574861
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||||||| ||  ||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |    
T  45574978 tcatgcagcttagttaaataacaacagcaacataggcagtatgcaaaaacagcatgacataataataccaaatgcaagtcaacaacgtctcaattattaa 45574879  T
Q  100 catataattcaagtaatg 117  Q
    ||||||||||||||||||    
T  45574878 catataattcaagtaatg 45574861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 16361944 - 16362060
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    |||||||||||||||||||||| |||||||||||  |||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  16361944 tcatgcagcttagttaaataacgacagcaacacaacagtatataaaaacaacatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 16362043  T
Q  101 atataattcaagtaatg 117  Q
    | |||||||||||||||    
T  16362044 aaataattcaagtaatg 16362060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 21707194 - 21707310
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||| ||    
T  21707194 tcatgcagcttagttaaataacaacaacaacacaatagtatacaaaaaaagcatgacagaataatatcaaatgcaagtcaacaacgtctcaattattcac 21707293  T
Q  101 atataattcaagtaatg 117  Q
    |||||| ||| ||||||    
T  21707294 atataaatcatgtaatg 21707310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 21711736 - 21711852
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||| ||    
T  21711736 tcatgcagcttagttaaataacaacaacaacacaatagtatacaaaaaaagcatgacagaataatatcaaatgcaagtcaacaacgtctcaattattcac 21711835  T
Q  101 atataattcaagtaatg 117  Q
    |||||| ||| ||||||    
T  21711836 atataaatcatgtaatg 21711852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 22123203 - 22123086
Alignment:
Q  1 tcatgcagcttagttaaataacaa-cagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||| ||| ||||||||||  |||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||| |    
T  22123203 tcatgcagcttagttaaatagcaaacagcaacacaacagtatacaaaaatagcatgacataataatatcaaatgcaagtcaacaatgtctcaattattca 22123104  T
Q  100 catataattcaagtaatg 117  Q
    ||| ||||||||||||||    
T  22123103 catttaattcaagtaatg 22123086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 13212997 - 13212880
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaa-caacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||| || ||  |||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||| |    
T  13212997 tcatgcagcttagttaaataacaacagcgacgcaacagtatacaaaaacaacatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 13212898  T
Q  100 catataattcaagtaatg 117  Q
    || ||||||||| |||||    
T  13212897 caaataattcaattaatg 13212880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 21342123 - 21342240
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaa-caacgtctcaattattta 99  Q
    ||||||||||||||||||||||||||   |||||| |||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||| |    
T  21342123 tcatgcagcttagttaaataacaacaaagacacagcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 21342222  T
Q  100 catataattcaagtaatg 117  Q
    || ||||||||| |||||    
T  21342223 caaataattcaattaatg 21342240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 21346988 - 21347105
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaa-caacgtctcaattattta 99  Q
    ||||||||||||||||||||||||||   |||||| |||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||| |    
T  21346988 tcatgcagcttagttaaataacaacaaagacacagcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 21347087  T
Q  100 catataattcaagtaatg 117  Q
    || ||||||||| |||||    
T  21347088 caaataattcaattaatg 21347105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 40389181 - 40389298
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaa-caacgtctcaattattta 99  Q
    ||||||| ||| |||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||| |    
T  40389181 tcatgcaacttggttaaataacaacagcgacacatcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcatcgtctcaattattca 40389280  T
Q  100 catataattcaagtaatg 117  Q
    |||||||||||| |||||    
T  40389281 catataattcaattaatg 40389298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 433039 - 433153
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    ||||||||||||||||||||||    |||||||||  |||||||||||||| || |||||||||||||||||||||| |||||||| ||||||||||| |    
T  433039 tcatgcagcttagttaaataacg---gcaacacaggcagtatacaaaaacatcaagacataataatatcaaatgcaagtcaacaacatctcaattattca 433135  T
Q  100 catataattcaagtaatg 117  Q
    ||||||||||||||||||    
T  433136 catataattcaagtaatg 433153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 15860144 - 15860033
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaa-caacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||| |||||||| |||| |||||||| ||||| | |    
T  15860144 tcatgcagcttagttaaataacaacagcgacacagcagtatacaaaaacaacatgacataataatattaaatgcaagtcaatcaacgtcttaattactca 15860045  T
Q  100 catataattcaa 111  Q
    || |||||||||    
T  15860044 caaataattcaa 15860033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 117
Target Start/End: Complemental strand, 16275491 - 16275382
Alignment:
Q  9 cttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaa-caacgtctcaattatttacatataat 107  Q
    |||||||||||||||||| | ||| || |||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||| ||||| |||    
T  16275491 cttagttaaataacaacaacgacatagcagtatacaaaaacagcatgacataataatatcaattgcaagtcaatcaacgtctcaattattcacataaaat 16275392  T
Q  108 tcaagtaatg 117  Q
    |||| |||||    
T  16275391 tcaattaatg 16275382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 50210304 - 50210187
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||||||| |||||||| |||||| |||  |    
T  50210304 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaagtataca 50210205  T
Q  100 catataattcaagtaatg 117  Q
       |||||||||||||||    
T  50210204 ttcataattcaagtaatg 50210187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 34509810 - 34509906
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattat 96  Q
    |||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||| ||||||||||||| |||||||| ||| ||||||    
T  34509810 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataatgatatcaaatgcaagtcaacaacatcttaattat 34509906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 27250820 - 27250703
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||| ||||||| ||  |||||||||||||||||||||||||||||||||| ||||| ||| |||| ||| || |||| |    
T  27250820 tcatgcagcttagttaaataacaatagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattca 27250721  T
Q  100 catataattcaagtaatg 117  Q
     |||| ||||||||||||    
T  27250720 aatattattcaagtaatg 27250703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 211 - 270
Target Start/End: Original strand, 433248 - 433307
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  433248 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 433307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 22532299 - 22532416
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||  ||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||| | ||||| |||||||| ||| || |||| |    
T  22532299 tcatgcaatttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatccattgcaattcaacaacatcttaaatattca 22532398  T
Q  100 catataattcaagtaatg 117  Q
       |||||||||||||||    
T  22532399 ttcataattcaagtaatg 22532416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 211 - 270
Target Start/End: Original strand, 16758892 - 16758951
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 270  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  16758892 cccaaggttcaactctcaacaactcgtgcgacaaagatcgcaaaatcctaaacgagcatt 16758951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 211 - 270
Target Start/End: Original strand, 21342334 - 21342393
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 270  Q
    |||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||    
T  21342334 cccaaggttcaactctcaacaactcgtgcgacaacgatcgcaaaaacctaaacaagcatt 21342393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 211 - 270
Target Start/End: Original strand, 21347199 - 21347258
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 270  Q
    |||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||    
T  21347199 cccaaggttcaactctcaacaactcgtgcgacaacgatcgcaaaaacctaaacaagcatt 21347258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 21026710 - 21026795
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaac 85  Q
    |||||||||||||||||||||||||||||| | | | ||||||||||| ||||||||| |||  ||||||| ||||| ||||||||    
T  21026710 tcatgcagcttagttaaataacaacagcaatataggcagtatacaaaatcagcatgacgtaaatatatcaattgcaattcaacaac 21026795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 22468787 - 22468690
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatt 97  Q
    ||||||| |||||||||||||||| ||||||| ||  ||  ||||| ||||||||||||| |||||||||| ||||| |||||||| ||| |||||||    
T  22468787 tcatgcaacttagttaaataacaatagcaacataggcagattacaacaacagcatgacatcataatatcaattgcaattcaacaacatcttaattatt 22468690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 20847245 - 20847173
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaaat 72  Q
    |||||||||||||||||||||||||||||||| | | |||| |||||| |||||||||||||  |||||||||    
T  20847245 tcatgcagcttagttaaataacaacagcaacataggcagtacacaaaatcagcatgacataaatatatcaaat 20847173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 117
Target Start/End: Complemental strand, 21861616 - 21861544
Alignment:
Q  45 aaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttacatataattcaagtaatg 117  Q
    |||||||||||| |||| |||||||||||||| ||| |||| ||||||  ||| | |||||||||||||||||    
T  21861616 aaaacagcatgatataacaatatcaaatgcaagtcatcaacatctcaaacattcatatataattcaagtaatg 21861544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 50210090 - 50210043
Alignment:
Q  214 aaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 261  Q
    ||||||||||||||||| |||||||| |||||| ||||||||||||||    
T  50210090 aaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaa 50210043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 14295642 - 14295557
Alignment:
Q  1 tcatgcagcttagttaaataac-aacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaac 85  Q
    |||||||||||||||||||||| |||||||||| | ||||||| | ||| || ||||| ||||||||||| |||| |||||||||||    
T  14295642 tcatgcagcttagttaaataacaaacagcaacataggtagtatgc-aaaccatcatgatataataatatcgaatgtaaatcaacaac 14295557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 21896347 - 21896230
Alignment:
Q  1 tcatgcagcttagttaaataacaa-cagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattt 98  Q
    ||||||| |||||||||  ||||| |||||||| ||  ||||||||||| |||||||| |||| |||||||||||||| ||| |||| ||||||  |||     
T  21896347 tcatgcaacttagttaataaacaaacagcaacataggcagtatacaaaa-cagcatgatataacaatatcaaatgcaagtcatcaacatctcaaacattc 21896249  T
Q  99 acatataattcaagtaatg 117  Q
    | |||||||||| ||||||    
T  21896248 atatataattcatgtaatg 21896230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 22532512 - 22532560
Alignment:
Q  213 caaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 261  Q
    ||||||||||||||||||  ||||||| |||||| ||||||||||||||    
T  22532512 caaggttcaactctcaacagctcgtgcaacaaaggtcgcaaaatcctaa 22532560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 35261169 - 35261086
Alignment:
Q  1 tcatgcagcttagttaaataacaa-cagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaaca 83  Q
    |||||||||||||||||  ||||| |||||||| ||  ||||| ||||| |||||||| |||| |||||||||||||||||||||    
T  35261169 tcatgcagcttagttaataaacaaacagcaacataggcagtatgcaaaa-cagcatgatataacaatatcaaatgcaaatcaaca 35261086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 20454644 - 20454613
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaaca 32  Q
    ||||||||||||||||||||||||||||||||    
T  20454644 tcatgcagcttagttaaataacaacagcaaca 20454613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 211 - 266
Target Start/End: Complemental strand, 35260960 - 35260905
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    ||||| |||||||||  |||  ||||||||||||||||||||||||||||| ||||    
T  35260960 cccaatgttcaactcataacatctcgtgcgacaaagatcgcaaaatcctaagcaag 35260905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 267
Target Start/End: Original strand, 20346067 - 20346101
Alignment:
Q  233 ctcgtgcgacaaagatcgcaaaatcctaaacaagc 267  Q
    ||||||||||||||||||||||| |||||||||||    
T  20346067 ctcgtgcgacaaagatcgcaaaaccctaaacaagc 20346101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 257
Target Start/End: Complemental strand, 22356058 - 22356008
Alignment:
Q  207 ctatcccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatc 257  Q
    ||||||||||||||||||||| || |||||||| |||||| || |||||||    
T  22356058 ctatcccaaggttcaactctcgacaactcgtgcaacaaaggtctcaaaatc 22356008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 257
Target Start/End: Complemental strand, 22357744 - 22357694
Alignment:
Q  207 ctatcccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatc 257  Q
    ||||||||||||||||||||| || |||||||| |||||| || |||||||    
T  22357744 ctatcccaaggttcaactctcgacaactcgtgcaacaaaggtctcaaaatc 22357694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 261
Target Start/End: Original strand, 34510021 - 34510071
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 261  Q
    ||||||||||||| |||||| |||||||| |||||| |||||||| |||||    
T  34510021 cccaaggttcaaccctcaacaactcgtgcaacaaaggtcgcaaaaacctaa 34510071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 266
Target Start/End: Original strand, 26065202 - 26065235
Alignment:
Q  233 ctcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    ||||||||||||||||||||||| ||||||||||    
T  26065202 ctcgtgcgacaaagatcgcaaaaccctaaacaag 26065235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 41050073 - 41050033
Alignment:
Q  52 catgacataataatatcaaatgcaaatcaacaacgtctcaa 92  Q
    ||||| |||| ||||||||||||||||||||||| ||||||    
T  41050073 catgatataacaatatcaaatgcaaatcaacaacatctcaa 41050033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 50614154 - 50614114
Alignment:
Q  52 catgacataataatatcaaatgcaaatcaacaacgtctcaa 92  Q
    ||||| |||| ||||||||||||||||||||||| ||||||    
T  50614154 catgatataacaatatcaaatgcaaatcaacaacatctcaa 50614114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 50621982 - 50621942
Alignment:
Q  52 catgacataataatatcaaatgcaaatcaacaacgtctcaa 92  Q
    ||||| |||| ||||||||||||||||||||||| ||||||    
T  50621982 catgatataacaatatcaaatgcaaatcaacaacatctcaa 50621942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 10800 - 10916
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  10800 tcatgcagcttagttaaataacaacagcaacacagcagtatacaaaaacatcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 10899  T
Q  101 atataattcaagtaatg 117  Q
    |||||||| ||||||||    
T  10900 atataatttaagtaatg 10916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 13974 - 14090
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  13974 tcatgcagcttagataaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 14073  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  14074 atataattcaagtaatg 14090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 11315 - 11431
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  11315 tcatgcaacttagttaaataacaacagcaacacagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 11414  T
Q  101 atataattcaagtaatg 117  Q
    |||| ||||||||||||    
T  11415 atatgattcaagtaatg 11431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 97; Significance: 1e-47; HSPs: 6)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 134238 - 134354
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  134238 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaatacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 134337  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  134338 atataattcaagtaatg 134354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 136707 - 136823
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  136707 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaatacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 136806  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  136807 atataattcaagtaatg 136823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 139176 - 139292
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  139176 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaatacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 139275  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  139276 atataattcaagtaatg 139292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 144114 - 144230
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  144114 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaatacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 144213  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  144214 atataattcaagtaatg 144230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 141645 - 141761
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||| ||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  141645 tcatgtagcttagttaaataacaacagcaacacaacagtatacaaatacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 141744  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  141745 atataattcaagtaatg 141761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 132688 - 132784
Alignment:
Q  1 tcatgcagcttagttaaataac-aacagcaaca-cagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattat 96  Q
    ||||||||||||| |||||||| ||||||||||  |||||||| ||||| || ||||| | || |||||| ||||  ||||| |||||||||||||||    
T  132688 tcatgcagcttagataaataacaaacagcaacataagtagtatgcaaaatcatcatgatacaacaatatcgaatg-taatcatcaacgtctcaattat 132784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 501111 - 501227
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  501111 tcatgcagcttagttaaataacaacagcaacacagcaatatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 501210  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  501211 atataattcaagtaatg 501227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 85715 - 85598
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaa-caacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||| |    
T  85715 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcaacgtctgaattattca 85616  T
Q  100 catataattcaagtaatg 117  Q
    || ||||||||| |||||    
T  85615 caaataattcaattaatg 85598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 12382 - 12268
Alignment:
Q  3 atgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttacat 102  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||    
T  12382 atgcagcttagttaaataacaacagcaacacagcagaatacaaaaacagcatgacaaaataatatcaaatgcaagtcaacaacgtctcaattattcacat 12283  T
Q  103 ataattcaagtaatg 117  Q
     ||||||||||||||    
T  12282 ttaattcaagtaatg 12268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 40430 - 40543
Alignment:
Q  4 tgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttacata 103  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  40430 tgcagcttagttaaataacaacagcaacacaacagtatacaaaaacaggatgacataataatatcaaatgcaagtcaacaacgtctcaattattcacata 40529  T
Q  104 taattcaagtaatg 117  Q
     |||||||||||||    
T  40530 aaattcaagtaatg 40543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 89; Significance: 6e-43; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 9269 - 9385
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  9269 tcatgcagcttagttaaataacaacagcaacacaacagtatataaaaacatcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 9368  T
Q  101 atataattcaagtaatg 117  Q
    |||||||| ||||||||    
T  9369 atataatttaagtaatg 9385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 89; Significance: 6e-43; HSPs: 4)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 79419 - 79303
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    |||||||||||||||||||||||||||||||||   |||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||    
T  79419 tcatgcagcttagttaaataacaacagcaacacgacagtatataaaaacagcatgacataataatttcaaatgcaagtcaacaacgtctcaattattcac 79320  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  79319 atataattcaagtaatg 79303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 17308 - 17189
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaa--cagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatt 97  Q
    |||||||||||||||||||||||||||||||| ||  ||||||||||||  |||||||||||||||||||||||||||| |||||||| |||||| |||     
T  17308 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaagtata 17209  T
Q  98 tacatataattcaagtaatg 117  Q
     |   |||||||||||||||    
T  17208 cattcataattcaagtaatg 17189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 211 - 266
Target Start/End: Complemental strand, 79209 - 79154
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  79209 cccaaggttcaactctcaatgactcgtgcgacaaagatcgcaaaatcctaaacaag 79154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 261
Target Start/End: Complemental strand, 17095 - 17045
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 261  Q
    ||||||||| |||||||||| |||||||| |||||| ||||||||||||||    
T  17095 cccaaggtttaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaa 17045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 89; Significance: 6e-43; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 20513 - 20398
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  20513 tcatgcagcttagttaaataacaacagcaacacatcagtatacaaaa-caacatgacataataatatcaaatgcaagtcaacaacgtctcaattattcac 20415  T
Q  101 atataattcaagtaatg 117  Q
    |||||||||||||||||    
T  20414 atataattcaagtaatg 20398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 207 - 266
Target Start/End: Complemental strand, 20309 - 20250
Alignment:
Q  207 ctatcccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  20309 ctatcccaaggttcaactctcaacgactcgtgcgacaaagaccgcaaaatcctaaacaag 20250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 128781 - 128897
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||| |||||||||||||||| ||||||| |  |  | | ||||||||||||||||||||||||||||||||| |||||||| ||| || |||| |     
T  128781 tcatgcaacttagttaaataacaaaagcaacaaaaaaaaaaaaaaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaa 128880  T
Q  101 atataattcaagtaatg 117  Q
     |||| |||||||||||    
T  128881 ttatacttcaagtaatg 128897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 29959 - 30074
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| ||    
T  29959 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagcatgacataataatatcaagtgtaagtcaacaacgtctcaattattcac 30058  T
Q  101 atataattcaagtaat 116  Q
    ||||||||||| ||||    
T  30059 atataattcaaataat 30074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 86; Significance: 4e-41; HSPs: 4)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 9776 - 9893
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattt-a 99  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||| |    
T  9776 tcatgcagcttagttaaataacaacagcaacacaacagtatacaaaaacagaatgacataataatatcaagtgcaagtcaacaacgtctcaattatttca 9875  T
Q  100 catataattcaagtaatg 117  Q
    |||||||||||| |||||    
T  9876 catataattcaaataatg 9893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 38791 - 38907
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||| ||||||||||| ||||||| ||  ||||||||||| |||||||||||||||||||||||||||||| |||||| ||| || |||| |    
T  38791 tcatgcagcttaattaaataacaatagcaacataggcagtatacaaaa-cagcatgacataataatatcaaatgcaaataaacaacatcttaaatattca 38889  T
Q  100 catataattcaagtaatg 117  Q
      |||| |||||||||||    
T  38890 attatacttcaagtaatg 38907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 32972 - 33088
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||| ||||||||||| ||||||| ||  ||||||||||| |||||||||||||||||||||||||||| | |||||| ||| || |||| |    
T  32972 tcatgcagcttaattaaataacaatagcaacataggcagtatacaaaa-cagcatgacataataatatcaaatgcaagttaacaacatcttaaatattca 33070  T
Q  100 catataattcaagtaatg 117  Q
      |||| |||||||||||    
T  33071 attatacttcaagtaatg 33088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 261
Target Start/End: Original strand, 39001 - 39051
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 261  Q
    |||||||||||||||||||| |||||||| |||||| |||||||| |||||    
T  39001 cccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaa 39051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 23 - 117
Target Start/End: Original strand, 12107 - 12201
Alignment:
Q  23 aacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttacatataattcaagtaatg 117  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  12107 aacagcaacacagcagtatactaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcacatataattcaagtaatg 12201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 4241 - 4358
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaa-caacgtctcaattattta 99  Q
    ||||||| |||||||||||||| ||||| |||||| ||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||| |    
T  4241 tcatgcaacttagttaaataacgacagcgacacagcagtatacaaaaccagcatgacataataatatcaaatgcaagtcaatcaacgtctcaattattca 4340  T
Q  100 catataattcaagtaatg 117  Q
    |||||||||||| |||||    
T  4341 catataattcaattaatg 4358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 77; Significance: 8e-36; HSPs: 2)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 22913 - 23029
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||| ||| || |||| |     
T  22913 tcatgcagcttagttaaataacaacagcaacacaccagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaa 23012  T
Q  101 atataattcaagtaatg 117  Q
     |||| |||||||||||    
T  23013 ttatacttcaagtaatg 23029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 261
Target Start/End: Original strand, 23123 - 23173
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 261  Q
    |||||||||||||||||||| |||||||| |||||| |||||||| |||||    
T  23123 cccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaa 23173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 1416 - 1299
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaa-caacgtctcaattattta 99  Q
    ||||||||||| ||||||||||||||  ||||||  |||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||| |    
T  1416 tcatgcagcttggttaaataacaacaataacacatgagtatacaaaaacagcatgacataataatatcaaatgcaagtcaatcatcgtctcaattattca 1317  T
Q  100 catataattcaagtaatg 117  Q
    |||||||||||| |||||    
T  1316 catataattcaattaatg 1299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 44798 - 44706
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaa 92  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  44798 tcatgcagcttagttaaataacaacagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaa 44706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 26156 - 26039
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||  |    
T  26156 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaaatgtaattcaacaacgtctcaagtataca 26057  T
Q  100 catataattcaagtaatg 117  Q
       |||||||||||||||    
T  26056 ttcataattcaagtaatg 26039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 2261 - 2147
Alignment:
Q  4 tgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaa-caacgtctcaattatttacat 102  Q
    ||||||||||||||||||||||||| |||||  |||||||||||||| ||||||||||||||||||||||||| ||||  ||||||||||||||| |||     
T  2261 tgcagcttagttaaataacaacagcgacacaacagtatacaaaaacaacatgacataataatatcaaatgcaagtcaattaacgtctcaattattcacaa 2162  T
Q  103 ataattcaagtaatg 117  Q
    ||||||||| |||||    
T  2161 ataattcaattaatg 2147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 117
Target Start/End: Complemental strand, 18071 - 18001
Alignment:
Q  47 aacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttacatataattcaagtaatg 117  Q
    |||| ||||| ||||||||||| || |||| | |||||| |||||| |||| |||||||||||||||||||    
T  18071 aacatcatgatataataatatcgaacgcaagtaaacaacatctcaaatattcacatataattcaagtaatg 18001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 161225 - 161108
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaa-caacgtctcaattattta 99  Q
    |||||||||||||||||||| ||||||| |||||| ||||||||||||||  |||||||||||||||||||||||| |||| |||| ||||||||||| |    
T  161225 tcatgcagcttagttaaatatcaacagcgacacagcagtatacaaaaacataatgacataataatatcaaatgcaagtcaatcaacatctcaattattca 161126  T
Q  100 catataattcaagtaatg 117  Q
    || ||||||||| |||||    
T  161125 caaataattcaattaatg 161108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 117
Target Start/End: Complemental strand, 164674 - 164609
Alignment:
Q  53 atgacataataatatcaaatgcaaatcaa-caacgtctcaattatttacatataattcaagtaatg 117  Q
    |||||||||||||||||||||||| |||| |||| ||||||||||| ||| ||||||||| |||||    
T  164674 atgacataataatatcaaatgcaagtcaatcaacatctcaattattcacaaataattcaattaatg 164609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 63; Significance: 2e-27; HSPs: 6)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 117
Target Start/End: Original strand, 4544 - 4654
Alignment:
Q  8 gcttagttaaataacaacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttacatataa 106  Q
    ||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||| |||||||| |||||| |||  |   ||||    
T  4544 gcttagttaaataacaacagcaacacaagcagtatataaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcataa 4643  T
Q  107 ttcaagtaatg 117  Q
    |||||||||||    
T  4644 ttcaagtaatg 4654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 117
Target Start/End: Original strand, 12126 - 12236
Alignment:
Q  8 gcttagttaaataacaacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttacatataa 106  Q
    ||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||| |||||||| |||||| |||  |   ||||    
T  12126 gcttagttaaataacaacagcaacacaagcagtatataaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcataa 12225  T
Q  107 ttcaagtaatg 117  Q
    |||||||||||    
T  12226 ttcaagtaatg 12236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 117
Target Start/End: Original strand, 22078 - 22188
Alignment:
Q  8 gcttagttaaataacaacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttacatataa 106  Q
    ||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||| |||||||| |||||| |||  |   ||||    
T  22078 gcttagttaaataacaacagcaacacaagcagtatataaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcataa 22177  T
Q  107 ttcaagtaatg 117  Q
    |||||||||||    
T  22178 ttcaagtaatg 22188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 261
Target Start/End: Original strand, 4748 - 4798
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 261  Q
    |||||||||||||||| ||| ||| ||||||||  ||||||||||||||||    
T  4748 cccaaggttcaactcttaacaacttgtgcgacactgatcgcaaaatcctaa 4798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 261
Target Start/End: Original strand, 12330 - 12380
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 261  Q
    |||||||||||||||| ||| ||| ||||||||  ||||||||||||||||    
T  12330 cccaaggttcaactcttaacaacttgtgcgacactgatcgcaaaatcctaa 12380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 261
Target Start/End: Original strand, 22282 - 22332
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 261  Q
    |||||||||||||||| ||| ||| ||||||||  ||||||||||||||||    
T  22282 cccaaggttcaactcttaacaacttgtgcgacactgatcgcaaaatcctaa 22332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 3277 - 3160
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||||||| ||  |||||||||||||||||||| |||||||||||||||| || |||||||| |||||| |||  |    
T  3277 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgatataataatatcaaatgtaattcaacaacatctcaagtataca 3178  T
Q  100 catataattcaagtaatg 117  Q
       |||||||||||||||    
T  3177 ttcataattcaagtaatg 3160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 16691 - 16574
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||| || |||||| | |||||| |||  |    
T  16691 tcatgcagcttagttaaataacaacagcaacacaagcagtatacgaaaacagcatgacataataatatcaaatggaagtcaacagcatctcaagtataca 16592  T
Q  100 catataattcaagtaatg 117  Q
       |||||||||||||||    
T  16591 ttcataattcaagtaatg 16574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 13241 - 13358
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||| ||||| ||| |||| ||| || |||| |    
T  13241 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattca 13340  T
Q  100 catataattcaagtaatg 117  Q
     ||||  |||||||||||    
T  13341 aatattcttcaagtaatg 13358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 257
Target Start/End: Original strand, 13448 - 13498
Alignment:
Q  207 ctatcccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatc 257  Q
    |||||||||||||||||| || || |||||||| |||||| ||||||||||    
T  13448 ctatcccaaggttcaactgtcgacaactcgtgcaacaaaggtcgcaaaatc 13498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 116457 - 116547
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaa 92  Q
    |||||||||||||||||||||||||||| |||||  ||||||||||| |||||||||||||| ||||||||||||| |||||||| ||||||    
T  116457 tcatgcagcttagttaaataacaacagcgacacaacagtatacaaaa-cagcatgacataatcatatcaaatgcaagtcaacaacatctcaa 116547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 129008 - 128968
Alignment:
Q  52 catgacataataatatcaaatgcaaatcaacaacgtctcaa 92  Q
    ||||| |||| ||||||||||||||||||||||| ||||||    
T  129008 catgatataacaatatcaaatgcaaatcaacaacatctcaa 128968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 1139 - 1022
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||||| ||||| ||  |||||||||||| ||||||||||||||||||||| ||||| ||| |||| ||| || |||| |    
T  1139 tcatgcagcttagttaaataacaacaacaacataggcagtatacaaaaatagcatgacataataatatcaattgcaattcatcaacatcttaaatattca 1040  T
Q  100 catataattcaagtaatg 117  Q
     |||| ||||||||||||    
T  1039 aatattattcaagtaatg 1022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 3241 - 3125
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||||||| ||  ||||||||||| || ||||||||||||||||||||||||| |||||||| |||||| |||  |    
T  3241 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaa-caacatgacataataatatcaaatgcaagtcaacaacatctcaaatataca 3143  T
Q  100 catataattcaagtaatg 117  Q
       |||||||||||||||    
T  3142 ttcataattcaagtaatg 3125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 255
Target Start/End: Complemental strand, 3031 - 2987
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaa 255  Q
    |||||||||||||||||||| |||||||| ||| || ||||||||    
T  3031 cccaaggttcaactctcaacaactcgtgcaacacaggtcgcaaaa 2987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 4879 - 4964
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaac 85  Q
    |||||||| ||||||||||||||||||||||| ||  ||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  4879 tcatgcagattagttaaataacaacagcaacataggcagtatacaaaatcagcatgacataataatatcaaatgcaattcaacaac 4964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 39507 - 39623
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||||| ||||| ||  ||||||||||| |||||||||||||||||||||||||||| |||||||| |||||| |||  |    
T  39507 tcatgcagcttagttaaataacaacaacaacataggcagtatacaaaa-cagcatgacataataatatcaaatgcaagtcaacaacatctcaaatataca 39605  T
Q  100 catataattcaagtaatg 117  Q
       |||||||||||||||    
T  39606 ttcataattcaagtaatg 39623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 39717 - 39765
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcct 259  Q
    ||||||||||||| || ||| ||| |||||||| |||||||||||||||    
T  39717 cccaaggttcaacccttaacaacttgtgcgacacagatcgcaaaatcct 39765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 75305 - 75189
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||||| ||||| ||  ||||||||||| |||||||||||||||||||||||||||| |||||||| |||||| |||  |    
T  75305 tcatgcagcttagttaaataacaacaacaacataggcagtatacaaaa-cagcatgacataataatatcaaatgcaagtcaacaacatctcaaatataca 75207  T
Q  100 catataattcaagtaatg 117  Q
       |||||||||||||||    
T  75206 ttcataattcaagtaatg 75189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 75095 - 75047
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcct 259  Q
    ||||||||||||| || ||| ||| |||||||| |||||||||||||||    
T  75095 cccaaggttcaacccttaacaacttgtgcgacacagatcgcaaaatcct 75047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 58; Significance: 2e-24; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 1881 - 1998
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||| ||||| ||| |||| ||| || |||| |    
T  1881 tcatgcagcttagttaaataacaacagcaacatagacagtatacaaaaacaacatgacataataatatcaattgcaattcatcaacatcttaaatattca 1980  T
Q  100 catataattcaagtaatg 117  Q
     ||||  |||||||||||    
T  1981 aatattcttcaagtaatg 1998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 207404 - 207359
Alignment:
Q  207 ctatcccaaggttcaactctcaacgactcgtgcgacaaagatcgca 252  Q
    |||||||||||||||||||  ||| |||||||||||||||||||||    
T  207404 ctatcccaaggttcaactcataacaactcgtgcgacaaagatcgca 207359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 257
Target Start/End: Original strand, 2088 - 2138
Alignment:
Q  207 ctatcccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatc 257  Q
    ||||||||||||||||||||| || |||||||| |||||| || |||||||    
T  2088 ctatcccaaggttcaactctcgacaactcgtgcaacaaaggtcacaaaatc 2138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 51943 - 52060
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||||||||||| ||  | |||||||||||||||||||||||||||||||| ||||| |||||| | ||| || |||| |    
T  51943 tcatgcagcttagttaaataacaacagcaacataggcaatatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattca 52042  T
Q  100 catataattcaagtaatg 117  Q
      |||| |||||||||||    
T  52043 attatacttcaagtaatg 52060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 168069 - 167952
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||||| ||||| ||  |||||||||||| ||||||||||||||||||||| ||||| ||| |||| ||| || |||| |    
T  168069 tcatgcagcttagttaaataacaacaacaacataggcagtatacaaaaatagcatgacataataatatcaattgcaattcatcaacatcttaaatattca 167970  T
Q  100 catataattcaagtaatg 117  Q
     |||| ||||||||||||    
T  167969 aatattattcaagtaatg 167952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 3584 - 3504
Alignment:
Q  37 agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttacatataattcaagtaatg 117  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||  ||  |||||||||||||||    
T  3584 agtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaattatacactcataattcaagtaatg 3504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 211 - 270
Target Start/End: Original strand, 225648 - 225707
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 270  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  225648 cccaaggttcaactctcaacaactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 225707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 225482 - 225553
Alignment:
Q  45 aaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttacatataattcaagtaatg 117  Q
    |||||||| ||| ||||||||||||||||| |||||||||| ||||||  ||| | |||||||||||||||||    
T  225482 aaaacagcgtgatataataatatcaaatgc-aatcaacaacatctcaaacattcatatataattcaagtaatg 225553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 8509 - 8594
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacag-tagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaac 85  Q
    ||||||||||| |||||||||||| ||||||| || |||||||||||||||| |||||||||||||||||| ||||| ||||||||    
T  8509 tcatgcagcttggttaaataacaatagcaacataggtagtatacaaaaacagtatgacataataatatcaattgcaagtcaacaac 8594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 255
Target Start/End: Original strand, 8717 - 8760
Alignment:
Q  212 ccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaa 255  Q
    ||||||||||||||||||| |||||||| |||||| ||||||||    
T  8717 ccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaa 8760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 54; Significance: 4e-22; HSPs: 7)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 33047 - 32963
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaac 85  Q
    ||||||||||||||||| |||||||||||||||||  ||||||||||| |||||||||||||||||||||| ||||| ||||||||    
T  33047 tcatgcagcttagttaattaacaacagcaacacaggcagtatacaaaa-cagcatgacataataatatcaattgcaattcaacaac 32963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 45958 - 46042
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaac 85  Q
    ||||||||||||||||| |||||||||||||||||  ||||||||||| |||||||||||||||||||||| ||||| ||||||||    
T  45958 tcatgcagcttagttaattaacaacagcaacacaggcagtatacaaaa-cagcatgacataataatatcaattgcaattcaacaac 46042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 16143 - 16219
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaaatgcaa 76  Q
    |||||||||||||||||||||||||| ||||| | | ||||||||||||||||| || || ||||||||||||||||    
T  16143 tcatgcagcttagttaaataacaacaacaacataggcagtatacaaaaacagcaagatatcataatatcaaatgcaa 16219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 16330 - 16378
Alignment:
Q  213 caaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 261  Q
    |||||||||||||||||| |||||||| |||||| |||||||| |||||    
T  16330 caaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaa 16378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 261
Target Start/End: Complemental strand, 32839 - 32789
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 261  Q
    |||||||||||||||| ||| | | |||||||| |||||||||||||||||    
T  32839 cccaaggttcaactcttaacaattggtgcgacacagatcgcaaaatcctaa 32789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 261
Target Start/End: Original strand, 46166 - 46216
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 261  Q
    |||||||||||||||| ||| | | |||||||| |||||||||||||||||    
T  46166 cccaaggttcaactcttaacaattggtgcgacacagatcgcaaaatcctaa 46216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 17420 - 17388
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacac 33  Q
    ||||| |||||||||||||||||||||||||||    
T  17420 tcatgtagcttagttaaataacaacagcaacac 17388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 54; Significance: 4e-22; HSPs: 3)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 28444 - 28529
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaac 85  Q
    |||||||||||||||||||||||||| ||||| ||  |||||||||||||| ||||||||||||||||||| ||||| ||||||||    
T  28444 tcatgcagcttagttaaataacaacaacaacataggcagtatacaaaaacaacatgacataataatatcaattgcaattcaacaac 28529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 211 - 266
Target Start/End: Complemental strand, 16800 - 16745
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    ||||||||| | |||| ||| |||||||||||||||||||||||| ||||||||||    
T  16800 cccaaggtttatctcttaacaactcgtgcgacaaagatcgcaaaaccctaaacaag 16745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 211 - 266
Target Start/End: Complemental strand, 25960 - 25905
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    ||||||||| | |||| ||| |||||||||| ||||||||||||| ||||||||||    
T  25960 cccaaggtttatctcttaacaactcgtgcgataaagatcgcaaaaccctaaacaag 25905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 6215 - 6095
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaaca-ca---gtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattat 96  Q
    |||||||||||||||||||||||||| ||||| ||   ||||||||||||||||||||||||| |||||||||| ||||| ||| |||| ||| || |||    
T  6215 tcatgcagcttagttaaataacaacaacaacaacataggtagtatacaaaaacagcatgacatgataatatcaattgcaattcatcaacatcttaaatat 6116  T
Q  97 ttacatataattcaagtaatg 117  Q
    | | ||||  |||||||||||    
T  6115 tcaaatattcttcaagtaatg 6095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 11534 - 11464
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacag-tagtatacaaaaacagcatgacataataatatcaa 70  Q
    |||||||||||||||||||||||||| ||||| || ||||||||||||||| |||||||||||||||||||    
T  11534 tcatgcagcttagttaaataacaacaacaacataggtagtatacaaaaacaacatgacataataatatcaa 11464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 24394 - 24276
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacaca-gtagtatacaaaa-acagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattt 98  Q
    |||||||||||||||||||||||||||||||| | | ||||||||||| |||||||||||||| |||||||| ||||| ||| |||| ||| || ||||     
T  24394 tcatgcagcttagttaaataacaacagcaacataggcagtatacaaaacacagcatgacataaaaatatcaattgcaattcatcaacatcttaaatattc 24295  T
Q  99 acatataattcaagtaatg 117  Q
    | ||||  |||||||||||    
T  24294 aaatattcttcaagtaatg 24276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 257
Target Start/End: Complemental strand, 24185 - 24135
Alignment:
Q  207 ctatcccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatc 257  Q
    ||||||||| ||||||||||| || |||||||| |||||| ||||||||||    
T  24185 ctatcccaaagttcaactctcgacaactcgtgcaacaaaggtcgcaaaatc 24135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 1947 - 1898
Alignment:
Q  221 aactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1947 aactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcatt 1898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 12170 - 12223
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaaca 264  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  12170 cccaaggttcaactctcaacgactcgtgtgacaaagatcgcaaaatcctaaaca 12223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 11993 - 12042
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagtagtatacaaaaaca 50  Q
    ||||||||||||||||||||||||||||||||||  ||||||| ||||||    
T  11993 tcatgcagcttagttaaataacaacagcaacacaacagtataccaaaaca 12042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 3500 - 3617
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    ||||| |||||||||||||||| | ||||||| ||  |||||||||||||||||||||||||||||||||| ||||| ||| |||| ||| || |||| |    
T  3500 tcatgtagcttagttaaataactaaagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattca 3599  T
Q  100 catataattcaagtaatg 117  Q
     ||||  |||||||||||    
T  3600 aatattcttcaagtaatg 3617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 373 - 457
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaac 85  Q
    ||||||||||||||||||||||||||  |||| | | ||||||| |||| |||||||| |||||||||||| || || ||||||||    
T  373 tcatgcagcttagttaaataacaacaataacataggcagtatac-aaaatagcatgacgtaataatatcaattggaagtcaacaac 457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 13092 - 13151
Alignment:
Q  58 ataataatatcaaatgcaaatcaacaacgtctcaattatttacatataattcaagtaatg 117  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||    
T  13092 ataataatatcaaatgcaagtcaacaacgtctcaattattcacatataattgaagtaatg 13151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 8496 - 8613
Alignment:
Q  1 tcatgcagcttagttaaataac-aacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattt 98  Q
    |||||||||||||||||||||| |||| ||||| | | ||||| | |||||||||||| |||| |||||||||||||| ||| |||| |||||| ||||     
T  8496 tcatgcagcttagttaaataacaaacaacaacataggcagtatgc-aaaacagcatgatataacaatatcaaatgcaagtcatcaacatctcaaatattc 8594  T
Q  99 acatataattcaagtaatg 117  Q
    | |||||||||||||||||    
T  8595 atatataattcaagtaatg 8613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 1982 - 2099
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    ||||||||||||||||| |||||||||| ||| ||  ||||||||||| || ||||||||||| ||||||| ||||| |||||||| ||| || |||| |    
T  1982 tcatgcagcttagttaattaacaacagcgacataggcagtatacaaaatcaacatgacataatgatatcaattgcaattcaacaacatcttaaatattca 2081  T
Q  100 catataattcaagtaatg 117  Q
     | || ||||||||||||    
T  2082 aacattattcaagtaatg 2099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 46; Significance: 3e-17; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 25926 - 26042
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    ||||| |||||||||||||||||| ||||||| ||  |||||||||||  | ||||||||||||||||||||||||| | |||||| |||||| |||| |    
T  25926 tcatgaagcttagttaaataacaatagcaacataggcagtatacaaaat-atcatgacataataatatcaaatgcaagtaaacaacatctcaaatattca 26024  T
Q  100 catataattcaagtaatg 117  Q
      |||| |||||||||||    
T  26025 attatacttcaagtaatg 26042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 39888 - 40004
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    ||||| |||||||||||||||||| ||||||| ||  |||||||||||  | ||||||||||||||||||||||||| | |||||| |||||| |||| |    
T  39888 tcatgaagcttagttaaataacaatagcaacataggcagtatacaaaat-atcatgacataataatatcaaatgcaagtaaacaacatctcaaatattca 39986  T
Q  100 catataattcaagtaatg 117  Q
      |||| |||||||||||    
T  39987 attatacttcaagtaatg 40004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 261
Target Start/End: Original strand, 26136 - 26186
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 261  Q
    |||||||||||||||||||| | |||||| |||||| ||||||||||||||    
T  26136 cccaaggttcaactctcaacaaatcgtgcaacaaaggtcgcaaaatcctaa 26186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 211 - 266
Target Start/End: Complemental strand, 15495 - 15440
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||    
T  15495 cccaaggttcaactctcaacgattcgtgcgacaaagatcgaaaaatcctaagcaag 15440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 110
Target Start/End: Original strand, 12643 - 12708
Alignment:
Q  45 aaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttacatataattca 110  Q
    |||||||||||| |||| |||||||||||||| ||| |||| |||||| || ||| ||||||||||    
T  12643 aaaacagcatgatataacaatatcaaatgcaagtcatcaacatctcaaatacttatatataattca 12708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 27840 - 27723
Alignment:
Q  1 tcatgcagcttagttaaataacaa-cagcaacacag-tagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattt 98  Q
    |||||||||||||||||  ||||| || ||||| || |||||| ||||| |||||||| |||| ||||||||||| ||||||||||| ||||||  |||     
T  27840 tcatgcagcttagttaataaacaaacaacaacataggtagtatgcaaaa-cagcatgatataacaatatcaaatgtaaatcaacaacatctcaaacattc 27742  T
Q  99 acatataattcaagtaatg 117  Q
    ||||||||||| |||||||    
T  27741 acatataattctagtaatg 27723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 4742 - 4803
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacaca-gtagtatacaaaaacagcatgacataa 61  Q
    |||||||||||||||||||||||||| ||||| | | |||||||||||||||||||||||||    
T  4742 tcatgcagcttagttaaataacaacaacaacataggcagtatacaaaaacagcatgacataa 4803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 39943 - 40059
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||| ||||||||||| ||||||| ||  ||||||||||| || ||||||||||||||||||||||||  |||| ||| ||| || |||||     
T  39943 tcatgcagcttaattaaataacaatagcaacataggcagtatacaaaa-caacatgacataataatatcaaatgcatgtcaataacatcttaaatatttg 40041  T
Q  100 catataattcaagtaatg 117  Q
      |||| |||||||||||    
T  40042 attatacttcaagtaatg 40059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 211 - 254
Target Start/End: Original strand, 40153 - 40196
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaa 254  Q
    |||||||||||||||||||| |||||||| |||||| |||||||    
T  40153 cccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaa 40196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 117
Target Start/End: Original strand, 13159 - 13239
Alignment:
Q  37 agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttacatataattcaagtaatg 117  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||| | ||| || |||| |  |||| |||||||||||    
T  13159 agtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaattatacttcaagtaatg 13239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 255
Target Start/End: Original strand, 13333 - 13377
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaa 255  Q
    ||||| |||||||||||||| |||||||| |||||| ||||||||    
T  13333 cccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaa 13377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 174796 - 174911
Alignment:
Q  1 tcatgcagcttagttaaataacaa-cagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattt 98  Q
    |||||||||||||||||||||||| |||||||| ||  |||||||||   ||||||||||| || ||||||||| ||| |||||||| ||||||| |||     
T  174796 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaa---cagcatgacatgattatatcaaattcaattcaacaacatctcaatcattc 174892  T
Q  99 acatataattcaagtaatg 117  Q
    |   |||||||||||||||    
T  174893 attcataattcaagtaatg 174911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 257
Target Start/End: Original strand, 124822 - 124872
Alignment:
Q  207 ctatcccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatc 257  Q
    ||||||||||||||||||||| || |||||||| |||||| ||||||||||    
T  124822 ctatcccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatc 124872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 4)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 266
Target Start/End: Original strand, 13371 - 13426
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    ||||||||| |||||  ||| |||||||||||||||||||||||||||||||||||    
T  13371 cccaaggtttaactcataacaactcgtgcgacaaagatcgcaaaatcctaaacaag 13426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 214 - 266
Target Start/End: Complemental strand, 15976 - 15924
Alignment:
Q  214 aaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    ||||||||||||  ||| ||| |||||||||||||||||||||||||||||||    
T  15976 aaggttcaactcataacaacttgtgcgacaaagatcgcaaaatcctaaacaag 15924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 16191 - 16074
Alignment:
Q  1 tcatgcagcttagttaaataacaa-cagcaacacag-tagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattt 98  Q
    |||||||||||||||||  ||||| || ||||| || |||||| ||||| || ||||| |||| ||||||||||| ||||||||||| ||||||  |||     
T  16191 tcatgcagcttagttaataaacaaacaacaacataggtagtatgcaaaa-caacatgatataacaatatcaaatgtaaatcaacaacatctcaaacattc 16093  T
Q  99 acatataattcaagtaatg 117  Q
      |||||||||||||||||    
T  16092 ttatataattcaagtaatg 16074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 13203 - 13276
Alignment:
Q  45 aaaacagcatgacataataatatcaaatgcaaatcaacaacgtct-caattatttacatataattcaagtaatg 117  Q
    |||||||||||| |||| ||||||||||||||||||||||| |||  ||  ||| | |||||||||||||||||    
T  13203 aaaacagcatgatataacaatatcaaatgcaaatcaacaacatctgaaaccattcatatataattcaagtaatg 13276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 8620 - 8507
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattta 99  Q
    |||||||||||||||||||||||   |||||| ||  ||||| |||||||||||||||||||||||||||| ||||| |||||| | ||| || |||| |    
T  8620 tcatgcagcttagttaaataaca---gcaacataggcagtat-caaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattca 8525  T
Q  100 catataattcaagtaatg 117  Q
      |||| |||||||||||    
T  8524 attatacttcaagtaatg 8507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 38793 - 38679
Alignment:
Q  1 tcatgcagcttagttaaataacaa-cagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattt 98  Q
    ||||||| |||||||||||||||| |||||||| ||  ||||| ||||| || ||||| |||| |||||||||||||| ||| |||  |||||| |||||    
T  38793 tcatgcaccttagttaaataacaaacagcaacatagacagtatgcaaaa-caacatgatataacaatatcaaatgcaagtcatcaatatctcaaatattt 38695  T
Q  99 acatataattcaagta 114  Q
    | ||||||||||||||    
T  38694 atatataattcaagta 38679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 13527 - 13596
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaa 70  Q
    |||||||||||||||||||||||||||||||| | | ||||||| |||||| |||||||| ||||||||||    
T  13527 tcatgcagcttagttaaataacaacagcaacataggcagtatac-aaaacaacatgacatgataatatcaa 13596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 15554 - 15485
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaa 70  Q
    |||||||||||||||||||||||| ||||||| | | ||||||| |||||| |||||||||||||||||||    
T  15554 tcatgcagcttagttaaataacaagagcaacataggcagtatac-aaaacaacatgacataataatatcaa 15485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 53640 - 53523
Alignment:
Q  1 tcatgcagcttagttaaataacaa-cagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattt 98  Q
    |||||||||||||||||  ||||| |||||||| ||  ||||| ||||| || ||||| |||| |||||||||||||| ||| |||| |||||| ||||     
T  53640 tcatgcagcttagttaataaacaaacagcaacataggcagtatgcaaaa-caacatgatataacaatatcaaatgcaagtcatcaacatctcaaatattc 53542  T
Q  99 acatataattcaagtaatg 117  Q
    | |||||||||||||||||    
T  53541 atatataattcaagtaatg 53523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 32097 - 32165
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaa 70  Q
    |||||||||||||||||||||||||||||||| | | |||| ||  ||||| |||||||||||||||||||    
T  32097 tcatgcagcttagttaaataacaacagcaacataggcagtaaac--aaacaacatgacataataatatcaa 32165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 27911 - 27977
Alignment:
Q  51 gcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttacatataattcaagtaatg 117  Q
    |||||||||||||||||||||||||| |||||||| |||||| |||  |   |||||||||||||||    
T  27911 gcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcataattcaagtaatg 27977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 28071 - 28119
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcct 259  Q
    |||||||||||||||| ||| ||| |||||||| |||| ||||||||||    
T  28071 cccaaggttcaactcttaacaacttgtgcgacacagattgcaaaatcct 28119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 261
Target Start/End: Original strand, 10404 - 10454
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 261  Q
    |||||||||||||||| ||| ||| |||||||| |||||||||||||||||    
T  10404 cccaaggttcaactcttaacaacttgtgcgacacagatcgcaaaatcctaa 10454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2014 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold2014
Description:

Target: scaffold2014; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 1062 - 1154
Alignment:
Q  1 tcatgcagcttagttaaataac-aacagcaacaca-gtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaa 92  Q
    |||||||||||||||||||||| |||||||||| | | ||||| | |||||||||||| |||| |||||||||| | ||||| |||| ||||||    
T  1062 tcatgcagcttagttaaataacaaacagcaacataggcagtatgc-aaaacagcatgatataacaatatcaaatacgaatcatcaacatctcaa 1154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 2897 - 2805
Alignment:
Q  1 tcatgcagcttagttaaataacaa-cagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaa 92  Q
    |||||||||||||||||||||||| |||| ||| ||  ||||| ||||  || ||||| |||| ||||||||||||||||||||||| ||||||    
T  2897 tcatgcagcttagttaaataacaaacagctacataggcagtatgcaaat-catcatgatataacaatatcaaatgcaaatcaacaacatctcaa 2805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 20946 - 21026
Alignment:
Q  7 agcttagttaaataacaa-cagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaac 85  Q
    ||||||||||| |||||| |||||||| ||  | ||| |||||||| ||||||||||||||||||| ||||| ||||||||    
T  20946 agcttagttaattaacaatcagcaacataggcaatatgcaaaaacaacatgacataataatatcaattgcaattcaacaac 21026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 4766 - 4814
Alignment:
Q  213 caaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 261  Q
    |||||||||||||| ||| |||||||| |||||| ||||||||||||||    
T  4766 caaggttcaactcttaacaactcgtgcaacaaaggtcgcaaaatcctaa 4814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 8090 - 8137
Alignment:
Q  45 aaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaa 92  Q
    |||||||||||| |||| |||||||||||||| |||||||| ||||||    
T  8090 aaaacagcatgatataacaatatcaaatgcaagtcaacaacatctcaa 8137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0356 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0356
Description:

Target: scaffold0356; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 211 - 266
Target Start/End: Complemental strand, 541 - 486
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    ||||||| |||||||  |||  ||||||||||||||||||||||| ||||||||||    
T  541 cccaaggatcaactcgtaacatctcgtgcgacaaagatcgcaaaaccctaaacaag 486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 15694 - 15776
Alignment:
Q  4 tgcagcttagttaaataacaa-cagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaac 85  Q
    ||||||||||||||||||||| |||||||| ||  ||||||||||  || ||||| ||||||||||| |||| |||||||||||    
T  15694 tgcagcttagttaaataacaaacagcaacataggcagtatacaaac-catcatgatataataatatcgaatgtaaatcaacaac 15776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 211 - 266
Target Start/End: Complemental strand, 29303 - 29248
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    ||||||| |||||||  |||  ||||||||||||||||||||||| ||||||||||    
T  29303 cccaagggtcaactcataacatctcgtgcgacaaagatcgcaaaaccctaaacaag 29248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 211 - 266
Target Start/End: Original strand, 85786 - 85841
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag 266  Q
    ||||||| |||||||  |||  ||||||||||||||||||||||| ||||||||||    
T  85786 cccaaggatcaactcgtaacatctcgtgcgacaaagatcgcaaaaccctaaacaag 85841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 11494 - 11611
Alignment:
Q  1 tcatgcagcttagttaaataacaa-cagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattt 98  Q
    ||||||||||||||||| |||||| |||||||| ||  ||||| ||||| || ||||| |||||||||||  | | || | |||||| |||||| || |     
T  11494 tcatgcagcttagttaattaacaatcagcaacataggcagtatgcaaaa-catcatgatataataatatcgcacgtaagtaaacaacatctcaaataatc 11592  T
Q  99 acatataattcaagtaatg 117  Q
    |||||||||||||||||||    
T  11593 acatataattcaagtaatg 11611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 257
Target Start/End: Original strand, 20640 - 20690
Alignment:
Q  207 ctatcccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatc 257  Q
    |||| |||||||||||||||| || |||||||| |||||| ||||||||||    
T  20640 ctattccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatc 20690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 267
Target Start/End: Original strand, 8390 - 8424
Alignment:
Q  233 ctcgtgcgacaaagatcgcaaaatcctaaacaagc 267  Q
    ||||||||||||||||||||||| |||||||||||    
T  8390 ctcgtgcgacaaagatcgcaaaaccctaaacaagc 8424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 249
Target Start/End: Complemental strand, 9719 - 9677
Alignment:
Q  207 ctatcccaaggttcaactctcaacgactcgtgcgacaaagatc 249  Q
    |||||||||||||||||||  ||| ||||||||||||||||||    
T  9719 ctatcccaaggttcaactcataacaactcgtgcgacaaagatc 9677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 38347 - 38230
Alignment:
Q  1 tcatgcagcttagttaaataacaa-cagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattt 98  Q
    ||||||||||||||||| |||||| |||||||| ||  ||||| ||||| || ||||| |||||||||||  | | || | |||||| |||||| || |     
T  38347 tcatgcagcttagttaattaacaatcagcaacataggcagtatgcaaaa-catcatgatataataatatcgcacgtaagtaaacaacatctcaaataatc 38249  T
Q  99 acatataattcaagtaatg 117  Q
    |||||||||||||||||||    
T  38248 acatataattcaagtaatg 38230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 265
Target Start/End: Complemental strand, 55564 - 55510
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaa 265  Q
    ||||||| |||||||  |||  ||||||||||||||||||||||| |||||||||    
T  55564 cccaagggtcaactcataacatctcgtgcgacaaagatcgcaaaaccctaaacaa 55510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 265
Target Start/End: Complemental strand, 24477 - 24423
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaa 265  Q
    ||||||| |||||||  |||  ||||||||||||||||||||||| |||||||||    
T  24477 cccaaggatcaactcataacatctcgtgcgacaaagatcgcaaaaacctaaacaa 24423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 257
Target Start/End: Complemental strand, 51764 - 51718
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatc 257  Q
    ||||||||||||||||| || |||||||| |||||| ||||||||||    
T  51764 cccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatc 51718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 265
Target Start/End: Complemental strand, 60594 - 60540
Alignment:
Q  211 cccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaa 265  Q
    |||||||||||||||  |||  ||||||||||||||||| ||||| |||||||||    
T  60594 cccaaggttcaactcataacatctcgtgcgacaaagatcacaaaaccctaaacaa 60540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 60807 - 60689
Alignment:
Q  1 tcatgcagcttagttaaataacaa-cagcaacacagt-agtatacaaaaacagc--atgacataataatatcaaatgcaaatcaacaacgtctcaattat 96  Q
    |||||||||||||||||  ||||| |||||||| ||  ||||||||||| ||||  |||| |||  |||||||| |||||||||||||| ||||||  ||    
T  60807 tcatgcagcttagttaataaacaaacagcaacataggcagtatacaaaa-cagctcatgatataccaatatcaa-tgcaaatcaacaacatctcaaacat 60710  T
Q  97 ttacatataattcaagtaatg 117  Q
    | | |||||||||||||||||    
T  60709 tcatatataattcaagtaatg 60689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 117
Target Start/End: Complemental strand, 8098 - 8033
Alignment:
Q  52 catgacataataatatcaaatgcaaatcaacaacgtctcaattatttacatataattcaagtaatg 117  Q
    ||||| |||||||||||||||| || |||||||| ||| ||  ||| | |||||||||||||||||    
T  8098 catgatataataatatcaaatgaaattcaacaacatcttaaacattcatatataattcaagtaatg 8033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 264 - 309
Alignment:
Q  207 ctatcccaaggttcaactctcaacgactcgtgcgacaaagatcgca 252  Q
    |||||||||||||||||||  ||  |||||||||||||||||||||    
T  264 ctatcccaaggttcaactcataaaaactcgtgcgacaaagatcgca 309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 10146 - 10191
Alignment:
Q  207 ctatcccaaggttcaactctcaacgactcgtgcgacaaagatcgca 252  Q
    |||||||||||||||||||  ||| |||||| ||||||||||||||    
T  10146 ctatcccaaggttcaactcataacaactcgtacgacaaagatcgca 10191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 32128 - 32224
Alignment:
Q  1 tcatgcagcttagttaaataac-aacagcaaca-cagtagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattat 96  Q
    ||||||||||||| |||||||| |||| |||||  |||||||| ||||| || ||||| |||| |||||| ||||  ||||| |||||||||||||||    
T  32128 tcatgcagcttagataaataacaaacaacaacataagtagtatgcaaaatcatcatgatataacaatatcgaatg-taatcatcaacgtctcaattat 32224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1257 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1257
Description:

Target: scaffold1257; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 2257 - 2217
Alignment:
Q  52 catgacataataatatcaaatgcaaatcaacaacgtctcaa 92  Q
    ||||| |||| ||||||||||||||||||||||| ||||||    
T  2257 catgatataacaatatcaaatgcaaatcaacaacatctcaa 2217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 1835 - 1795
Alignment:
Q  52 catgacataataatatcaaatgcaaatcaacaacgtctcaa 92  Q
    ||||| |||| ||||||||||||||||||||||| ||||||    
T  1835 catgatataacaatatcaaatgcaaatcaacaacatctcaa 1795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 10514 - 10399
Alignment:
Q  1 tcatgcagcttagttaaataacaa-cagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattt 98  Q
    ||||||||| ||||||| |||||| |||||||| ||  |||||||||   |||||||||||||||||||||| | ||| |||||||| ||| || |||      
T  10514 tcatgcagcatagttaattaacaaacagcaacataggcagtatacaa---cagcatgacataataatatcaatttcaattcaacaacatcttaagtatac 10418  T
Q  99 acatataattcaagtaatg 117  Q
    | ||||  |||||||||||    
T  10417 aaatattcttcaagtaatg 10399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 841 - 793
Alignment:
Q  213 caaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaa 261  Q
    ||||||||||||||||||  ||||||| |||||| ||| ||||||||||    
T  841 caaggttcaactctcaacagctcgtgcaacaaaggtcgaaaaatcctaa 793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 16312 - 16395
Alignment:
Q  1 tcatgcagcttagttaaataacaa-cagcaacacagt-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaac 85  Q
    ||||||||||||||||||||| || |||||||| ||  |||||||||   |||||||||||||| ||||||||| ||| ||| ||||    
T  16312 tcatgcagcttagttaaataagaaacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaac 16395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 117
Target Start/End: Original strand, 6677 - 6757
Alignment:
Q  37 agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattatttacatataattcaagtaatg 117  Q
    ||||||||||| || ||||||||||| |||||||  |||| |||||||| ||| || |||| | | || ||||||||||||    
T  6677 agtatacaaaatcaacatgacataatgatatcaatagcaattcaacaacatcttaaatattcaaacattattcaagtaatg 6757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 29120 - 29196
Alignment:
Q  1 tcatgcagcttagttaaataacaacagcaacacag-tagtatacaaaaacagcatgacataataatatcaaatgcaa 76  Q
    ||||||| |||||||||||||||| || | || || |||  ||||| || ||||||||||||||||||||| |||||    
T  29120 tcatgcatcttagttaaataacaatagtagcataggtagattacaacaatagcatgacataataatatcaattgcaa 29196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 97089 - 97129
Alignment:
Q  52 catgacataataatatcaaatgcaaatcaacaacgtctcaa 92  Q
    ||||| |||| ||||||||||||||||||||||| ||||||    
T  97089 catgatataacaatatcaaatgcaaatcaacaacatctcaa 97129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 106367 - 106407
Alignment:
Q  52 catgacataataatatcaaatgcaaatcaacaacgtctcaa 92  Q
    ||||| |||| ||||||||||||||||||||||| ||||||    
T  106367 catgatataacaatatcaaatgcaaatcaacaacatctcaa 106407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 3940 times since January 2019
Visitors: 4824