View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0759_low_94 (Length: 258)
Name: NF0759_low_94
Description: NF0759
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0759_low_94 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 21 - 258
Target Start/End: Complemental strand, 9484644 - 9484407
Alignment:
| Q |
21 |
acatcatcatgttggtggatttggatttcatcaatcatcatcatctggtggtttagtagctactactgttggtgaaaataatagtggaaattattttcag |
120 |
Q |
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| T |
9484644 |
acatcatcatgttggtggatttggatttcatcaatcatcatcatctggtggtttagtagctactactgttggtgaaaataatagtggaaattattttcag |
9484545 |
T |
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| Q |
121 |
aaaattggattttctggatttgatatgccaacaggaacaaatttgggagtgggaggaatgagttttacttcaattttggggggtgcaaatcagcagatgc |
220 |
Q |
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| T |
9484544 |
aaaattgggttttctggatttgatatgccaacaggaacaaatttgggagtgggagggatgagttttacttcaattttggggggtgcaaatcagcagatgc |
9484445 |
T |
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| Q |
221 |
ctggtttggaattagggttgtcacaagatggacatatt |
258 |
Q |
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| T |
9484444 |
ctggtttggaattagggttgtcacaagatggacatatt |
9484407 |
T |
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