View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0760_high_2 (Length: 615)

Name: NF0760_high_2
Description: NF0760
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0760_high_2
NF0760_high_2
[»] chr5 (37 HSPs)
chr5 (106-256)||(41666852-41667001)
chr5 (108-256)||(95363-95509)
chr5 (108-256)||(24269967-24270114)
chr5 (108-256)||(24346598-24346745)
chr5 (111-256)||(15480398-15480541)
chr5 (110-216)||(15590053-15590158)
chr5 (110-256)||(17352533-17352676)
chr5 (305-359)||(27903382-27903436)
chr5 (108-257)||(9368670-9368817)
chr5 (108-216)||(8081211-8081318)
chr5 (263-359)||(11682227-11682325)
chr5 (124-256)||(25258178-25258309)
chr5 (124-256)||(25321968-25322099)
chr5 (135-254)||(18333587-18333705)
chr5 (135-258)||(32908840-32908962)
chr5 (124-210)||(33337350-33337436)
chr5 (124-256)||(20510754-20510884)
chr5 (124-256)||(24531675-24531806)
chr5 (141-183)||(6919323-6919365)
chr5 (110-256)||(26137208-26137353)
chr5 (275-339)||(16707059-16707123)
chr5 (108-180)||(30770146-30770217)
chr5 (110-180)||(18885378-18885447)
chr5 (135-177)||(38731725-38731767)
chr5 (283-360)||(25436166-25436243)
chr5 (135-256)||(43117723-43117843)
chr5 (102-178)||(11682298-11682374)
chr5 (108-180)||(17015973-17016043)
chr5 (147-209)||(16704618-16704680)
chr5 (263-360)||(17899481-17899579)
chr5 (111-177)||(24528694-24528759)
chr5 (34-100)||(30073390-30073456)
chr5 (147-256)||(17150368-17150476)
chr5 (275-320)||(37782084-37782129)
chr5 (306-359)||(42490575-42490628)
chr5 (283-359)||(7369690-7369766)
chr5 (124-180)||(11896027-11896083)
[»] chr6 (32 HSPs)
chr6 (106-256)||(4868672-4868821)
chr6 (106-256)||(13353277-13353425)
chr6 (106-256)||(33796402-33796550)
chr6 (108-256)||(9705096-9705241)
chr6 (108-256)||(12330041-12330187)
chr6 (106-209)||(6400715-6400817)
chr6 (108-247)||(17147757-17147894)
chr6 (276-360)||(3823269-3823353)
chr6 (108-256)||(6542805-6542951)
chr6 (108-256)||(33494615-33494761)
chr6 (126-206)||(33631684-33631764)
chr6 (111-242)||(31961033-31961162)
chr6 (269-359)||(30711244-30711336)
chr6 (275-354)||(12329978-12330057)
chr6 (309-359)||(27993473-27993523)
chr6 (103-156)||(6311989-6312042)
chr6 (275-359)||(20830715-20830800)
chr6 (305-360)||(2297676-2297731)
chr6 (135-258)||(3680086-3680208)
chr6 (114-177)||(7638693-7638755)
chr6 (305-356)||(12319738-12319789)
chr6 (305-360)||(31996877-31996932)
chr6 (263-320)||(3921800-3921858)
chr6 (196-258)||(8001498-8001560)
chr6 (103-177)||(20830667-20830741)
chr6 (108-178)||(30256730-30256800)
chr6 (305-359)||(30392668-30392722)
chr6 (196-253)||(3823380-3823437)
chr6 (308-360)||(34847061-34847111)
chr6 (111-179)||(10313897-10313964)
chr6 (196-256)||(19712792-19712851)
chr6 (307-359)||(26192479-26192531)
[»] chr2 (42 HSPs)
chr2 (106-256)||(14466270-14466418)
chr2 (108-256)||(5711536-5711683)
chr2 (108-354)||(37812365-37812611)
chr2 (106-256)||(2029845-2029993)
chr2 (108-256)||(16419343-16419489)
chr2 (108-256)||(40379306-40379452)
chr2 (103-256)||(33381044-33381199)
chr2 (108-258)||(40149100-40149246)
chr2 (106-216)||(17525194-17525303)
chr2 (283-362)||(30006621-30006700)
chr2 (117-202)||(13250127-13250212)
chr2 (145-242)||(18607142-18607238)
chr2 (147-256)||(21383569-21383678)
chr2 (108-213)||(33606151-33606255)
chr2 (108-256)||(15124645-15124791)
chr2 (141-256)||(93248-93362)
chr2 (283-362)||(30063309-30063388)
chr2 (112-254)||(13210604-13210745)
chr2 (136-254)||(16533390-16533507)
chr2 (157-258)||(17719474-17719574)
chr2 (283-359)||(15988179-15988255)
chr2 (103-183)||(41069255-41069335)
chr2 (311-359)||(43819441-43819489)
chr2 (144-255)||(19110319-19110430)
chr2 (307-357)||(7209092-7209142)
chr2 (307-352)||(7748204-7748249)
chr2 (288-360)||(13250304-13250376)
chr2 (275-359)||(19571008-19571092)
chr2 (275-354)||(40149037-40149116)
chr2 (124-231)||(44404038-44404146)
chr2 (307-358)||(11099669-11099720)
chr2 (284-359)||(38629807-38629882)
chr2 (103-237)||(21383381-21383515)
chr2 (263-320)||(37812289-37812347)
chr2 (102-180)||(37828368-37828445)
chr2 (112-256)||(42895323-42895467)
chr2 (306-359)||(30001979-30002032)
chr2 (283-320)||(37840342-37840379)
chr2 (307-360)||(38580876-38580929)
chr2 (276-320)||(9927916-9927960)
chr2 (277-325)||(11020558-11020606)
chr2 (36-100)||(27487560-27487624)
[»] chr3 (33 HSPs)
chr3 (102-359)||(13574775-13575039)
chr3 (124-256)||(16239667-16239799)
chr3 (110-256)||(4155400-4155544)
chr3 (108-272)||(34992666-34992828)
chr3 (108-254)||(35038291-35038434)
chr3 (108-205)||(39683365-39683461)
chr3 (147-251)||(31150924-31151028)
chr3 (103-254)||(22775490-22775641)
chr3 (136-216)||(20327738-20327818)
chr3 (275-331)||(31317460-31317516)
chr3 (141-258)||(20303279-20303395)
chr3 (284-360)||(30179751-30179827)
chr3 (313-359)||(26916362-26916408)
chr3 (285-359)||(41915137-41915211)
chr3 (103-258)||(45828093-45828238)
chr3 (281-346)||(8487553-8487617)
chr3 (195-256)||(12930075-12930136)
chr3 (135-180)||(19954340-19954385)
chr3 (305-354)||(21387326-21387375)
chr3 (124-180)||(31317382-31317438)
chr3 (283-359)||(45828212-45828288)
chr3 (147-231)||(46139362-46139446)
chr3 (121-256)||(15019390-15019524)
chr3 (306-357)||(27484890-27484941)
chr3 (141-214)||(49629722-49629796)
chr3 (305-359)||(50052830-50052884)
chr3 (285-359)||(50930668-50930742)
chr3 (112-177)||(272507-272572)
chr3 (275-320)||(3975392-3975437)
chr3 (136-209)||(20303188-20303261)
chr3 (223-256)||(39620168-39620201)
chr3 (135-175)||(21808835-21808875)
chr3 (196-256)||(54567968-54568027)
[»] chr4 (52 HSPs)
chr4 (108-256)||(28245623-28245769)
chr4 (135-256)||(35788735-35788856)
chr4 (142-256)||(35819023-35819136)
chr4 (123-256)||(52559643-52559777)
chr4 (111-256)||(6218280-6218423)
chr4 (108-295)||(27634178-27634365)
chr4 (124-256)||(22231185-22231316)
chr4 (105-216)||(5398569-5398679)
chr4 (106-256)||(35796837-35796985)
chr4 (106-256)||(40717301-40717449)
chr4 (104-183)||(43743132-43743211)
chr4 (124-256)||(50543442-50543575)
chr4 (253-359)||(18981532-18981634)
chr4 (103-256)||(7926404-7926550)
chr4 (226-354)||(20726803-20726937)
chr4 (112-258)||(31944997-31945141)
chr4 (105-209)||(5398305-5398407)
chr4 (283-359)||(12005511-12005587)
chr4 (102-180)||(12005560-12005642)
chr4 (307-359)||(31943329-31943381)
chr4 (118-241)||(25324140-25324263)
chr4 (103-258)||(30530018-30530172)
chr4 (309-359)||(8904535-8904585)
chr4 (135-180)||(1215990-1216035)
chr4 (111-180)||(17111685-17111752)
chr4 (285-357)||(21041319-21041391)
chr4 (283-323)||(33107872-33107912)
chr4 (283-354)||(6218410-6218481)
chr4 (305-360)||(21393309-21393364)
chr4 (147-254)||(22822428-22822535)
chr4 (306-361)||(23209806-23209860)
chr4 (306-357)||(33108075-33108126)
chr4 (196-255)||(40716569-40716628)
chr4 (118-180)||(1215906-1215968)
chr4 (196-254)||(4464373-4464431)
chr4 (118-216)||(6666506-6666604)
chr4 (108-214)||(6778540-6778645)
chr4 (34-100)||(14119292-14119358)
chr4 (275-345)||(26030293-26030362)
chr4 (126-216)||(35645279-35645369)
chr4 (126-216)||(35645568-35645658)
chr4 (135-256)||(4645718-4645838)
chr4 (155-256)||(4905644-4905744)
chr4 (135-180)||(21646390-21646435)
chr4 (307-360)||(30971690-30971743)
chr4 (155-251)||(7572615-7572710)
chr4 (311-359)||(11053951-11053999)
chr4 (305-361)||(11056396-11056452)
chr4 (275-358)||(20253477-20253561)
chr4 (102-258)||(32002397-32002550)
chr4 (312-360)||(43262619-43262667)
chr4 (283-359)||(44118901-44118977)
[»] chr8 (46 HSPs)
chr8 (105-256)||(8084203-8084352)
chr8 (106-256)||(11232289-11232437)
chr8 (108-214)||(3157106-3157211)
chr8 (108-256)||(39052791-39052937)
chr8 (135-251)||(18004217-18004332)
chr8 (124-256)||(20301337-20301468)
chr8 (124-256)||(21087969-21088100)
chr8 (124-256)||(41790734-41790865)
chr8 (135-256)||(12688148-12688268)
chr8 (112-256)||(3157425-3157567)
chr8 (275-359)||(10614973-10615057)
chr8 (104-193)||(37867925-37868014)
chr8 (283-359)||(31079604-31079680)
chr8 (109-177)||(31079660-31079728)
chr8 (144-256)||(31197690-31197801)
chr8 (108-256)||(37868445-37868591)
chr8 (111-219)||(39052637-39052744)
chr8 (276-359)||(8466759-8466842)
chr8 (104-199)||(37868165-37868260)
chr8 (106-231)||(35682876-35683000)
chr8 (128-256)||(5675937-5676064)
chr8 (112-180)||(29006007-29006074)
chr8 (102-257)||(10615469-10615623)
chr8 (135-214)||(39960074-39960153)
chr8 (276-346)||(12289204-12289274)
chr8 (110-180)||(20094659-20094728)
chr8 (263-359)||(7729907-7730004)
chr8 (108-180)||(5675831-5675902)
chr8 (102-178)||(8849335-8849411)
chr8 (202-258)||(38476112-38476168)
chr8 (141-180)||(15797137-15797176)
chr8 (306-359)||(10615596-10615649)
chr8 (156-256)||(15042793-15042894)
chr8 (197-258)||(26208198-26208259)
chr8 (304-359)||(8715617-8715672)
chr8 (135-177)||(8715799-8715841)
chr8 (305-359)||(8716317-8716371)
chr8 (275-320)||(5675768-5675813)
chr8 (303-360)||(6462924-6462981)
chr8 (275-320)||(29099774-29099819)
chr8 (135-215)||(7669535-7669614)
chr8 (283-331)||(16962123-16962171)
chr8 (196-256)||(24532370-24532429)
chr8 (307-335)||(33816811-33816839)
chr8 (275-359)||(37868617-37868701)
chr8 (284-336)||(40014647-40014699)
[»] scaffold0519 (1 HSPs)
scaffold0519 (106-256)||(1992-2140)
[»] chr7 (48 HSPs)
chr7 (106-258)||(1596667-1596817)
chr7 (141-256)||(25620212-25620326)
chr7 (106-256)||(21861370-21861518)
chr7 (106-256)||(36277086-36277234)
chr7 (108-256)||(33834267-33834413)
chr7 (106-256)||(29469681-29469829)
chr7 (108-258)||(22574675-22574823)
chr7 (108-209)||(3519822-3519922)
chr7 (135-256)||(3519927-3520047)
chr7 (135-256)||(4886405-4886525)
chr7 (108-253)||(31892231-31892374)
chr7 (109-257)||(30727216-30727364)
chr7 (276-351)||(40898957-40899032)
chr7 (196-258)||(26239864-26239926)
chr7 (108-180)||(40746130-40746200)
chr7 (109-256)||(2404272-2404416)
chr7 (305-343)||(10420916-10420954)
chr7 (306-355)||(19065094-19065143)
chr7 (111-179)||(1936212-1936280)
chr7 (305-357)||(10420714-10420766)
chr7 (275-359)||(21213075-21213159)
chr7 (147-256)||(33996214-33996319)
chr7 (283-345)||(2937947-2938009)
chr7 (110-180)||(18826352-18826421)
chr7 (103-180)||(22339459-22339536)
chr7 (285-359)||(47849537-47849611)
chr7 (135-180)||(2315149-2315194)
chr7 (278-359)||(8125443-8125524)
chr7 (135-256)||(36993196-36993316)
chr7 (142-215)||(48661450-48661523)
chr7 (311-359)||(2600609-2600657)
chr7 (283-359)||(23794398-23794474)
chr7 (284-359)||(24612763-24612838)
chr7 (283-354)||(31892358-31892429)
chr7 (141-180)||(35308275-35308314)
chr7 (275-354)||(40898749-40898828)
chr7 (148-258)||(17948308-17948418)
chr7 (275-320)||(3392987-3393032)
chr7 (269-354)||(4507136-4507221)
chr7 (306-359)||(11473326-11473379)
chr7 (135-176)||(14540864-14540905)
chr7 (285-354)||(35308190-35308259)
chr7 (307-359)||(47849758-47849808)
chr7 (319-359)||(1936046-1936086)
chr7 (329-357)||(2376299-2376327)
chr7 (196-256)||(10882188-10882247)
chr7 (306-362)||(24043019-24043075)
chr7 (305-360)||(32292483-32292539)
[»] chr1 (44 HSPs)
chr1 (141-256)||(39348246-39348361)
chr1 (106-320)||(4112635-4112850)
chr1 (124-325)||(369635-369839)
chr1 (135-256)||(2859515-2859635)
chr1 (108-256)||(4112868-4113014)
chr1 (108-256)||(35772105-35772251)
chr1 (108-242)||(25713248-25713380)
chr1 (106-256)||(26176984-26177132)
chr1 (108-258)||(38668199-38668347)
chr1 (98-179)||(12325383-12325464)
chr1 (111-179)||(12376537-12376605)
chr1 (284-359)||(12376480-12376555)
chr1 (283-357)||(49142921-49142995)
chr1 (111-256)||(35892132-35892275)
chr1 (275-359)||(52907350-52907434)
chr1 (107-209)||(7307843-7307944)
chr1 (135-256)||(4098291-4098411)
chr1 (108-256)||(25145582-25145728)
chr1 (147-256)||(33156809-33156918)
chr1 (108-180)||(8870786-8870857)
chr1 (284-359)||(12325339-12325414)
chr1 (108-256)||(38733227-38733369)
chr1 (108-258)||(16163007-16163154)
chr1 (110-256)||(27413423-27413567)
chr1 (285-362)||(49316189-49316266)
chr1 (108-178)||(51460179-51460248)
chr1 (103-176)||(9146646-9146718)
chr1 (159-256)||(30369911-30370007)
chr1 (283-336)||(42351902-42351955)
chr1 (283-360)||(49868450-49868527)
chr1 (136-257)||(51460331-51460451)
chr1 (196-260)||(5953685-5953749)
chr1 (288-360)||(26229533-26229605)
chr1 (111-214)||(34264586-34264688)
chr1 (124-251)||(52961428-52961554)
chr1 (275-325)||(31004471-31004521)
chr1 (124-178)||(51459817-51459871)
chr1 (283-336)||(10991815-10991868)
chr1 (112-209)||(17208676-17208773)
chr1 (306-343)||(19622475-19622512)
chr1 (283-320)||(26347010-26347047)
chr1 (276-325)||(31181548-31181597)
chr1 (306-346)||(29898891-29898931)
chr1 (307-351)||(31739429-31739473)
[»] scaffold0692 (1 HSPs)
scaffold0692 (126-256)||(5633-5762)
[»] scaffold0041 (2 HSPs)
scaffold0041 (276-351)||(67252-67327)
scaffold0041 (275-354)||(67456-67535)
[»] scaffold0048 (1 HSPs)
scaffold0048 (106-180)||(81992-82065)
[»] scaffold0045 (2 HSPs)
scaffold0045 (306-359)||(41270-41323)
scaffold0045 (197-256)||(41156-41214)
[»] scaffold0459 (1 HSPs)
scaffold0459 (124-231)||(13197-13305)
[»] scaffold0366 (2 HSPs)
scaffold0366 (124-231)||(10838-10946)
scaffold0366 (124-231)||(14504-14612)
[»] scaffold0129 (1 HSPs)
scaffold0129 (150-320)||(14308-14484)
[»] scaffold0083 (1 HSPs)
scaffold0083 (123-250)||(51355-51481)
[»] scaffold0003 (2 HSPs)
scaffold0003 (102-257)||(87665-87819)
scaffold0003 (283-357)||(102184-102258)
[»] scaffold0729 (1 HSPs)
scaffold0729 (108-214)||(2611-2716)


Alignment Details
Target: chr5 (Bit Score: 75; Significance: 3e-34; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 106 - 256
Target Start/End: Original strand, 41666852 - 41667001
Alignment:
Q  106 tgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgat 205  Q
    ||||||||||| ||||||| |||||| | ||||| |||||||||||||||||||||||| ||||||||||||||| ||  ||| |||   ||||||||||    
T  41666852 tgtccgatgtgggactctt-aacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcccgataacggaaacctgat 41666950  T
Q  206 agcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    |||| |||||| || | |||||||||||||||||||| |||||||||||||    
T  41666951 agcaggtggcccaacggatcttggaggaggctctgataccatcttagaaat 41667001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 108 - 256
Target Start/End: Original strand, 95363 - 95509
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 207  Q
    ||||||||| ||||||| |||||| | ||||| |||||||||||||||||||||||| ||||||||||||||| ||  ||| || |  ||||||||||||    
T  95363 tccgatgtgtgactctt-aacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcccgatggcggaaacctgatag 95461  T
Q  208 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    || |||||| || | |||||||| ||||||||||| |||||||||||||    
T  95462 caggtggcccaatggatcttgga-gaggctctgataccatcttagaaat 95509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 108 - 256
Target Start/End: Original strand, 24269967 - 24270114
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 207  Q
    ||||||||| ||||||| |||||| | ||||| |||||||||||||| ||||||||| ||||||||||||||| ||  ||| |||   ||||||||||||    
T  24269967 tccgatgtgggactctt-aacacaccccctcacgaccagcactattgagcttggttcgtggacataaatggtgggtggcccgataacggaaacctgatag 24270065  T
Q  208 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    || |||||| || | |||||||||||||||||||| |||||||| ||||    
T  24270066 caggtggcccaatggatcttggaggaggctctgataccatcttaaaaat 24270114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 108 - 256
Target Start/End: Original strand, 24346598 - 24346745
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 207  Q
    ||||||||| ||||||| |||||| | ||||| |||||||||||||| ||||||||| ||||||||||||||| ||  ||| |||   ||||||||||||    
T  24346598 tccgatgtgggactctt-aacacaccccctcacgaccagcactattgagcttggttcgtggacataaatggtgggtggcccgataacggaaacctgatag 24346696  T
Q  208 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    || |||||| || | |||||||||||||||||||| |||||||| ||||    
T  24346697 caggtggcccaatggatcttggaggaggctctgataccatcttaaaaat 24346745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 111 - 256
Target Start/End: Complemental strand, 15480541 - 15480398
Alignment:
Q  111 gatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaa 210  Q
    |||||| ||||||| |||||| ||||||| ||||||||| ||| |||||||||| ||||||||||||||| ||  ||||||||  ||||||||||||||     
T  15480541 gatgtgggactctt-aacacacctcctcacgaccagcacgattaggcttggttcatggacataaatggtgggtggcccaatagcggaaacctgatagcag 15480443  T
Q  211 gtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    |||||| || | ||||| || ||||||||||| |||||||||||||    
T  15480442 gtggcccaatggatctt-gaagaggctctgataccatcttagaaat 15480398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 110 - 216
Target Start/End: Complemental strand, 15590158 - 15590053
Alignment:
Q  110 cgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagca 209  Q
    ||||||||||||||| |||||| | ||||| |||||||||||||||| ||||||| ||||||||||||||||||  ||| ||||  ||||| ||||||||    
T  15590158 cgatgtgagactctt-aacacaccccctcacgaccagcactattgggtttggttcgtggacataaatggtgagtagcccgatagcggaaacttgatagca 15590060  T
Q  210 agtggcc 216  Q
     ||||||    
T  15590059 ggtggcc 15590053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 110 - 256
Target Start/End: Original strand, 17352533 - 17352676
Alignment:
Q  110 cgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagca 209  Q
    ||||||| ||||||| |||||| ||||| | |||||||| ||||||||||||||| |||||||||| |||  ||  ||||||||  ||||||||||||||    
T  17352533 cgatgtgggactctt-aacacacctccttacgaccagcattattgggcttggttcgtggacataaacggtaggtgacccaatagcggaaacctgatagca 17352631  T
Q  210 agtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    ||||| |  ||| ||||| || ||||||||||| |||||||||||||    
T  17352632 agtgg-ctcaaggatctt-gaagaggctctgataccatcttagaaat 17352676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 305 - 359
Target Start/End: Complemental strand, 27903436 - 27903382
Alignment:
Q  305 ccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  27903436 ccacttataaacacatgttcatgtcatattttatcggatgtgagactctttaaca 27903382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 108 - 257
Target Start/End: Complemental strand, 9368817 - 9368670
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 207  Q
    ||||||||| ||||||| || ||| | ||||| |||||||||||||||| ||||||| |||||||| |||||| ||   |||||||  ||||||||||||    
T  9368817 tccgatgtgggactctt-aagacaccccctcacgaccagcactattgggtttggttcgtggacatacatggtgggtggtccaatagcggaaacctgatag 9368719  T
Q  208 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaatt 257  Q
    || |||||| || | ||||| || ||||||||||| ||| ||||||||||    
T  9368718 caggtggcccaatggatctt-gaagaggctctgataccaccttagaaatt 9368670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 108 - 216
Target Start/End: Original strand, 8081211 - 8081318
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 207  Q
    ||||||||| ||||||| |||||| | ||||| |||||||||||||||||||||||| ||||||||||||||| ||   || ||||| || |||||||||    
T  8081211 tccgatgtgggactctt-aacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggtccgataggggatacctgatag 8081309  T
Q  208 caagtggcc 216  Q
    || ||||||    
T  8081310 caggtggcc 8081318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 263 - 359
Target Start/End: Original strand, 11682227 - 11682325
Alignment:
Q  263 taactcatcctt-caaaatcagcttgtgaggtgatgattt-tctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    |||||||||||| ||||||||| |||||| |||| ||||| || | |||||||||||||| ||||  ||||||||| ||||||||||||||||||||||    
T  11682227 taactcatccttgcaaaatcagattgtgatgtgaggatttgtcccgacttataaacacattttcagatcatattttgtctgatgtgagactctttaaca 11682325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 124 - 256
Target Start/End: Original strand, 25258178 - 25258309
Alignment:
Q  124 ttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaa 223  Q
    |||||||| | ||||| |||||||| |||| |||||||||| ||||||||||| ||| ||   || ||||  |||||||||||||| |||||| || | |    
T  25258178 ttaacacaccccctcatgaccagcattatttggcttggttcgtggacataaattgtgggtggtccgatagcggaaacctgatagcaggtggcccaatgga 25258277  T
Q  224 tcttggaggaggctctgatgccatcttagaaat 256  Q
    ||||||| || |||||||| |||||||||||||    
T  25258278 tcttgga-gaagctctgataccatcttagaaat 25258309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 124 - 256
Target Start/End: Original strand, 25321968 - 25322099
Alignment:
Q  124 ttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaa 223  Q
    |||||||| | ||||| |||||||| |||| |||||||||| ||||||||||| ||| ||   || ||||  |||||||||||||| |||||| || | |    
T  25321968 ttaacacaccccctcatgaccagcattatttggcttggttcgtggacataaattgtgggtggtccgatagcggaaacctgatagcaggtggcccaatgga 25322067  T
Q  224 tcttggaggaggctctgatgccatcttagaaat 256  Q
    ||||||| || |||||||| |||||||||||||    
T  25322068 tcttgga-gaagctctgataccatcttagaaat 25322099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 254
Target Start/End: Original strand, 18333587 - 18333705
Alignment:
Q  135 cctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggag 234  Q
    ||||| ||||||||||| |||||||||||| ||||||||||||||| ||  ||| ||||   ||||||||||||| ||||||  | | ||||| || |||    
T  18333587 cctcacgaccagcactaatgggcttggttcgtggacataaatggtgggtggcccgatagcgaaaacctgatagcaggtggcccgatggatctt-gaagag 18333685  T
Q  235 gctctgatgccatcttagaa 254  Q
    |||||||| |||||||||||    
T  18333686 gctctgataccatcttagaa 18333705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 258
Target Start/End: Original strand, 32908840 - 32908962
Alignment:
Q  135 cctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggag 234  Q
    ||||| |||||||||||||||| ||||||| | ||||||||||||| ||  ||| |||| |||||||||||||||  ||||| || | ||||| || |||    
T  32908840 cctcacgaccagcactattgggtttggttcgttgacataaatggtgggtgacccgatagcagaaacctgatagcagatggcccaatggatctt-gaagag 32908938  T
Q  235 gctctgatgccatcttagaaattg 258  Q
    ||||| ||  ||||||||||||||    
T  32908939 gctctaatatcatcttagaaattg 32908962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 124 - 210
Target Start/End: Original strand, 33337350 - 33337436
Alignment:
Q  124 ttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaa 210  Q
    |||||||| | ||||| |||||||||||||||||||||||| ||||||||||||||| ||  ||| || |  |||||||||||||||    
T  33337350 ttaacacaccccctcatgaccagcactattgggcttggttcgtggacataaatggtgggtggcccgatggcggaaacctgatagcaa 33337436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 124 - 256
Target Start/End: Original strand, 20510754 - 20510884
Alignment:
Q  124 ttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaa 223  Q
    |||||||| | ||||| || || |||||||||||||||||| ||||||||||||| | ||  |||||||| ||||||||||||||| || ||| |  | |    
T  20510754 ttaacacaccccctcacgatcatcactattgggcttggttcgtggacataaatgg-gggtggcccaatagcagaaacctgatagcaggtagcccagtgga 20510852  T
Q  224 tcttggaggaggctctgatgccatcttagaaat 256  Q
    ||||||| || |||||||| |||||||| ||||    
T  20510853 tcttgga-gacgctctgataccatcttaaaaat 20510884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 124 - 256
Target Start/End: Complemental strand, 24531806 - 24531675
Alignment:
Q  124 ttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaa 223  Q
    |||||||| | ||||| |||||||||||||||||||||||| |||||||||||| || ||    | |||  ||||| ||||||||| |||||| || | |    
T  24531806 ttaacacaccccctcacgaccagcactattgggcttggttcgtggacataaatgttgggtggttcgataacagaaaactgatagcaggtggcccaatgga 24531707  T
Q  224 tcttggaggaggctctgatgccatcttagaaat 256  Q
    || | || ||||||||||| |||||||||||||    
T  24531706 tcataga-gaggctctgataccatcttagaaat 24531675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 141 - 183
Target Start/End: Original strand, 6919323 - 6919365
Alignment:
Q  141 gaccagcactattgggcttggttcttggacataaatggtgagt 183  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  6919323 gaccagcactattgggcttggttcgtggacataaatggtgagt 6919365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 110 - 256
Target Start/End: Original strand, 26137208 - 26137353
Alignment:
Q  110 cgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagca 209  Q
    ||||||| ||||||| || ||| | ||||| ||| |||| |||||| |||||||| |||||||||||| || ||  ||| || |   |||||||||||||    
T  26137208 cgatgtgggactctt-aatacaccccctcacgactagcattattggacttggttcgtggacataaatgatgggtggcccgatggtgaaaacctgatagca 26137306  T
Q  210 agtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
     |||||| ||  |||||||||| |||||||||| ||| |||||||||    
T  26137307 ggtggcccaacaaatcttggagtaggctctgataccaccttagaaat 26137353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 16707059 - 16707123
Alignment:
Q  275 caaaatcagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatc 339  Q
    ||||| ||||||||||||| | ||||  | ||||||||||||||||||||| |||||||||||||    
T  16707059 caaaaccagcttgtgaggttaggattgcccccacttataaacacatgttcaggtcatattttatc 16707123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 30770146 - 30770217
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtg 180  Q
    ||||||||| ||||||| |||||| | |||||  |||||| |||||||||||||||| |||||||||||||||    
T  30770146 tccgatgtgggactctt-aacacaccccctcacaaccagcgctattgggcttggttcgtggacataaatggtg 30770217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 180
Target Start/End: Complemental strand, 18885447 - 18885378
Alignment:
Q  110 cgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtg 180  Q
    ||||||| ||||||| |||||| |  |||| |||||||||||||||||||||||| | |||||||||||||    
T  18885447 cgatgtgggactctt-aacacaccctctcacgaccagcactattgggcttggttcatagacataaatggtg 18885378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 38731725 - 38731767
Alignment:
Q  135 cctcaggaccagcactattgggcttggttcttggacataaatg 177  Q
    ||||| |||||||||||||||||||||||| ||||||||||||    
T  38731725 cctcacgaccagcactattgggcttggttcatggacataaatg 38731767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 25436243 - 25436166
Alignment:
Q  283 gcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaacaa 360  Q
    ||||||||||||| ||||| |   ||||||||||||||||||| | ||| |||| |||||||| ||| ||||||||||    
T  25436243 gcttgtgaggtgaggatttcccttacttataaacacatgttcaagccatcttttgtctgatgtcagaatctttaacaa 25436166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 135 - 256
Target Start/End: Complemental strand, 43117843 - 43117723
Alignment:
Q  135 cctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggag 234  Q
    ||||| ||||| |||||||| ||||||||| |||||||||||| || ||   || ||||  |||||||||||||| |||||| ||   ||||||||  ||    
T  43117843 cctcacgaccaacactattgagcttggttcgtggacataaatgatgggtggtccgatagcggaaacctgatagcaggtggcccaatagatcttgga-aag 43117745  T
Q  235 gctctgatgccatcttagaaat 256  Q
    |||||||| | |||||||||||    
T  43117744 gctctgatactatcttagaaat 43117723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 178
Target Start/End: Original strand, 11682298 - 11682374
Alignment:
Q  102 attttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatgg 178  Q
    |||||||| ||||||||||||||||||| | |  |||| ||||| ||||||||| ||||||||  ||| ||||||||    
T  11682298 attttgtctgatgtgagactctttaacataccgtctcacgaccaacactattggacttggttcaaggatataaatgg 11682374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 17015973 - 17016043
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtg 180  Q
    ||||||||| ||||||| |||||| | ||||| ||||| ||||||||| |||||||| |||||||||||||||    
T  17015973 tccgatgtgggactctt-aacacaac-cctcacgaccaacactattggacttggttcgtggacataaatggtg 17016043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 147 - 209
Target Start/End: Original strand, 16704618 - 16704680
Alignment:
Q  147 cactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagca 209  Q
    |||||||||||||||||| |||||||||||| |||||  ||| ||||  ||||| ||||||||    
T  16704618 cactattgggcttggttcgtggacataaatgatgagtgacccgatagctgaaacatgatagca 16704680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 263 - 360
Target Start/End: Original strand, 17899481 - 17899579
Alignment:
Q  263 taactcatcctt-caaaatcagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaacaa 360  Q
    |||||||||||  ||||||| |||  |||||||| ||||  | ||||||||||||||||||||| | |||||||| || |||||  ||||||| |||||    
T  17899481 taactcatcctcacaaaatcggctcatgaggtgaggattgcccccacttataaacacatgttcaggccatattttgtcggatgtatgactcttcaacaa 17899579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 111 - 177
Target Start/End: Complemental strand, 24528759 - 24528694
Alignment:
Q  111 gatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatg 177  Q
    |||||| ||||||| |||||| | ||||| ||| ||||||||| |||||||||| ||||||||||||    
T  24528759 gatgtgggactctt-aacacaccccctcatgacaagcactattaggcttggttcgtggacataaatg 24528694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 30073456 - 30073390
Alignment:
Q  34 acatcatcaaagaaatctagataatgaacatcattaaaatacaatcctagcactataagcaacttca 100  Q
    |||||||||||  ||||||| |||| |||||||| |||| ||||  ||| |||||||||||||||||    
T  30073456 acatcatcaaatgaatctagctaataaacatcatcaaaacacaaatctaacactataagcaacttca 30073390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 256
Target Start/End: Original strand, 17150368 - 17150476
Alignment:
Q  147 cactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgcca 246  Q
    |||||||||  ||||||  ||||||||||||||| ||  ||| ||||  |||||||||||| | |||||| || | ||||| || ||||||||||| |||    
T  17150368 cactattggtattggtttctggacataaatggtgggtggcccgatagcggaaacctgatagtaggtggcccaatggatctt-gaagaggctctgatacca 17150466  T
Q  247 tcttagaaat 256  Q
    ||||| ||||    
T  17150467 tcttaaaaat 17150476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 320
Target Start/End: Original strand, 37782084 - 37782129
Alignment:
Q  275 caaaatcagcttgtgaggtgatgattttctccacttataaacacat 320  Q
    ||||| ||||||||||||||||||||  | ||||||||||||||||    
T  37782084 caaaaccagcttgtgaggtgatgattgcccccacttataaacacat 37782129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 359
Target Start/End: Complemental strand, 42490628 - 42490575
Alignment:
Q  306 cacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    |||||||||||| ||||| |||||||||||| | ||||||  ||||||||||||    
T  42490628 cacttataaacatatgtttatgtcatattttgtttgatgtatgactctttaaca 42490575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 283 - 359
Target Start/End: Complemental strand, 7369766 - 7369690
Alignment:
Q  283 gcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    ||||||||||||| || |  | |||||||||||||| |||||||| ||| | |||||  ||||| ||||||||||||    
T  7369766 gcttgtgaggtgaggactgcccccacttataaacacttgttcatgccatctcttatccaatgtgggactctttaaca 7369690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 11896027 - 11896083
Alignment:
Q  124 ttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtg 180  Q
    |||||||| | ||||| ||||| |||||||||| |||||||  ||||||||||||||    
T  11896027 ttaacacaccccctcacgaccatcactattgggtttggttcgcggacataaatggtg 11896083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 7e-32; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 106 - 256
Target Start/End: Original strand, 4868672 - 4868821
Alignment:
Q  106 tgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgat 205  Q
    ||||||||||| ||||||| |||||| | ||||| |||||||||||||||||||||||| ||||||||||||||| ||  ||| |||   ||||||||||    
T  4868672 tgtccgatgtgggactctt-aacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcccgataacggaaacctgat 4868770  T
Q  206 agcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    |||| |||||| |  | |||||||||||||||||||| |||||||||||||    
T  4868771 agcaggtggcccagcggatcttggaggaggctctgataccatcttagaaat 4868821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 106 - 256
Target Start/End: Complemental strand, 13353425 - 13353277
Alignment:
Q  106 tgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgat 205  Q
    ||||||||||| ||||||| |||||| | ||||| |||||||||||||||||||||||| ||||||||||||||| ||  ||| ||||  ||||||||||    
T  13353425 tgtccgatgtgggactctt-aacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgat 13353327  T
Q  206 agcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    | || |||||| || | |||||||| ||||||||||| |||||||||||||    
T  13353326 aacaggtggcccaatggatcttgga-gaggctctgataccatcttagaaat 13353277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 106 - 256
Target Start/End: Complemental strand, 33796550 - 33796402
Alignment:
Q  106 tgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgat 205  Q
    ||||||||||| ||||||| |||||| | ||||| |||||||||||||||||||||||| ||||||||||||||| ||  ||| ||||  ||||||||||    
T  33796550 tgtccgatgtgggactctt-aacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgat 33796452  T
Q  206 agcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    | || |||||| || | |||||||| ||||||||||| |||||||||||||    
T  33796451 aacaggtggcccaatggatcttgga-gaggctctgataccatcttagaaat 33796402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 108 - 256
Target Start/End: Complemental strand, 9705241 - 9705096
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 207  Q
    ||||||||| ||||||| |||||| | ||||| ||||||||||||||| |||||||  ||||||||||||||| ||  ||| |||   ||||||||||||    
T  9705241 tccgatgtgggactctt-aacacaccccctcacgaccagcactattggacttggtt--tggacataaatggtgggtggcccgataatggaaacctgatag 9705145  T
Q  208 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    || |||||| ||  ||||||||||||||||||||| |||||||||||||    
T  9705144 caggtggcccaacaaatcttggaggaggctctgataccatcttagaaat 9705096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 108 - 256
Target Start/End: Original strand, 12330041 - 12330187
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 207  Q
    ||||||||| ||||||| |||||| | ||||| ||||||||  |||||||||||||| ||||||||||||||| ||  ||| || |  ||||||||||||    
T  12330041 tccgatgtgggactctt-aacacaccccctcacgaccagcataattgggcttggttcgtggacataaatggtgggtggcccgatggcggaaacctgatag 12330139  T
Q  208 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    || |||||| || | |||||||| ||||||||||| |||| ||||||||    
T  12330140 caggtggcccaatggatcttgga-gaggctctgataccatattagaaat 12330187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 6400715 - 6400817
Alignment:
Q  106 tgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgat 205  Q
    ||||||||||||||||||| |||||  | ||||| |||||||||||||||||||||||| ||||||||||||||| ||   || |||| |||||||||||    
T  6400715 tgtccgatgtgagactctt-aacaccccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggtccgatagcagaaacctgat 6400813  T
Q  206 agca 209  Q
    ||||    
T  6400814 agca 6400817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 247
Target Start/End: Original strand, 17147757 - 17147894
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 207  Q
    ||||||||| ||||||| |||||| | |||||  ||||||||||||||||||||||| ||||||||||||||| ||  ||  ||||  ||||||||||||    
T  17147757 tccgatgtgggactctt-aacacaccccctcacaaccagcactattgggcttggttcgtggacataaatggtgggtgacctgatagcggaaacctgatag 17147855  T
Q  208 caagtggccaaaagaatcttggaggaggctctgatgccat 247  Q
    || ||| || || | || ||||| ||||||||||| ||||    
T  17147856 caggtgacccaatggatgttgga-gaggctctgataccat 17147894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 276 - 360
Target Start/End: Complemental strand, 3823353 - 3823269
Alignment:
Q  276 aaaatcagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaacaa 360  Q
    |||||||| |||||| ||||||||| || ||||||||||||| ||  ||| ||||| | ||||| ||||||||||||||||||||    
T  3823353 aaaatcagtttgtgatgtgatgattgtccccacttataaacaaattatcaggtcatctcttatccgatgtgagactctttaacaa 3823269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 108 - 256
Target Start/End: Original strand, 6542805 - 6542951
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 207  Q
    ||||||||||||||||| ||||||   ||||| ||||| |  |||||| |||||||| ||||||||||||||| ||  ||| |||   ||||||||||||    
T  6542805 tccgatgtgagactctt-aacacacaccctcacgaccaacgatattggacttggttcgtggacataaatggtgggtgacccgataacggaaacctgatag 6542903  T
Q  208 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    |||||| || || | ||||| || ||||||||||| ||||||| |||||    
T  6542904 caagtgacccaatggatctt-gaagaggctctgataccatctttgaaat 6542951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 108 - 256
Target Start/End: Complemental strand, 33494761 - 33494615
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 207  Q
    ||||||||| ||||||| |||||| |  |||| |||||||||||||||||||||||| || ||||||| |||| ||  ||| ||||  ||||||||||||    
T  33494761 tccgatgtgggactctt-aacacaccaactcacgaccagcactattgggcttggttcgtgaacataaacggtgggtggcccgatagtggaaacctgatag 33494663  T
Q  208 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    || ||| || || | ||| | || |||| |||||| |||||||||||||    
T  33494662 caggtgacccaatggatc-tcgaagaggttctgataccatcttagaaat 33494615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 126 - 206
Target Start/End: Original strand, 33631684 - 33631764
Alignment:
Q  126 aacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgata 206  Q
    |||||| | ||||| |||||||||||||| ||||||||  ||||||||||||||| || |||| |||| ||||||||||||    
T  33631684 aacacatcccctcacgaccagcactattgagcttggttagtggacataaatggtgggtgtcccgatagcagaaacctgata 33631764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 111 - 242
Target Start/End: Complemental strand, 31961162 - 31961033
Alignment:
Q  111 gatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaa 210  Q
    |||||| ||||||| |||||| | ||||| ||| || ||||||||||||||| | ||||||||||||||| |   | | |||| |||||||||||||||     
T  31961162 gatgtgggactctt-aacacatcccctcacgactagtactattgggcttggtccgtggacataaatggtggggggcacgatagcagaaacctgatagcag 31961064  T
Q  211 gtggccaaaagaatcttggaggaggctctgat 242  Q
    |||||| || | |||||||| |||||||||||    
T  31961063 gtggcccaatggatcttgga-gaggctctgat 31961033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 269 - 359
Target Start/End: Original strand, 30711244 - 30711336
Alignment:
Q  269 atccttcaaaatcagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcata--ttttatctgatgtgagactctttaaca 359  Q
    ||||| ||||||| | ||||||||||| |||| |||| ||||||||||||||||||||| ||||  |||| ||||||||   |||||||||||    
T  30711244 atcctacaaaatcggtttgtgaggtgaggattgtctctacttataaacacatgttcatgacatatcttttgtctgatgtagaactctttaaca 30711336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 275 - 354
Target Start/End: Original strand, 12329978 - 12330057
Alignment:
Q  275 caaaatcagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctt 354  Q
    ||||||||||||||||||||| ||||  | ||||||||||||||||  | || |||||| ||||| |||||| |||||||    
T  12329978 caaaatcagcttgtgaggtgaggattgcccccacttataaacacattgttatatcatatcttatccgatgtgggactctt 12330057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 359
Target Start/End: Original strand, 27993473 - 27993523
Alignment:
Q  309 ttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    |||||||||||||| |||| |||||||| ||| ||||||||||||||||||    
T  27993473 ttataaacacatgtccatgccatattttgtctaatgtgagactctttaaca 27993523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 6312042 - 6311989
Alignment:
Q  103 ttttgtccgatgtgagactctttaacacagctcctcaggaccagcactattggg 156  Q
    ||||||||||||||||||||||||||||| | |||||  || ||||||||||||    
T  6312042 ttttgtccgatgtgagactctttaacacatcccctcacaacaagcactattggg 6311989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 275 - 359
Target Start/End: Complemental strand, 20830800 - 20830715
Alignment:
Q  275 caaaatcagcttgtgaggtgatgattttctccacttat-aaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    ||||||||| ||||||||||||||||  | |||||||| ||||||||||| |  |||| |||| || ||||| |||||||||||||    
T  20830800 caaaatcagtttgtgaggtgatgattgcccccacttataaaacacatgtttagatcatcttttgtccgatgtaagactctttaaca 20830715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 360
Target Start/End: Complemental strand, 2297731 - 2297676
Alignment:
Q  305 ccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaacaa 360  Q
    ||||||||||||||||  |||| ||||||||| || |||||||||||||| |||||    
T  2297731 ccacttataaacacatactcatatcatattttgtccgatgtgagactcttcaacaa 2297676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 135 - 258
Target Start/End: Complemental strand, 3680208 - 3680086
Alignment:
Q  135 cctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggag 234  Q
    ||||| ||||| |||||||||||||||||  |||||||||||||||  |  ||| ||||  ||||||| |||||| ||| ||  | | || ||||| |||    
T  3680208 cctcacgaccaacactattgggcttggtttgtggacataaatggtggatgacccgatagcggaaacctaatagcaggtgacccgatggattttgga-gag 3680110  T
Q  235 gctctgatgccatcttagaaattg 258  Q
    | |||||| |||||||||||||||    
T  3680109 ggtctgataccatcttagaaattg 3680086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 177
Target Start/End: Original strand, 7638693 - 7638755
Alignment:
Q  114 gtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatg 177  Q
    ||||||||||| |||||||| | ||| ||| |||||||||||||||||||| | ||||||||||    
T  7638693 gtgagactctt-aacacagcccatcacgactagcactattgggcttggttcgtagacataaatg 7638755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 356
Target Start/End: Original strand, 12319738 - 12319789
Alignment:
Q  305 ccacttataaacacatgttcatgtcatattttatctgatgtgagactcttta 356  Q
    ||||||||||||||||  ||||||||| | |||||| |||||||||||||||    
T  12319738 ccacttataaacacattgtcatgtcatctcttatctaatgtgagactcttta 12319789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 360
Target Start/End: Original strand, 31996877 - 31996932
Alignment:
Q  305 ccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaacaa 360  Q
    ||||||||||||||||| ||||| ||| |||||||  ||||| |||||||||||||    
T  31996877 ccacttataaacacatggtcatgacatcttttatcctatgtgtgactctttaacaa 31996932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 263 - 320
Target Start/End: Complemental strand, 3921858 - 3921800
Alignment:
Q  263 taactcatcctt-caaaatcagcttgtgaggtgatgattttctccacttataaacacat 320  Q
    |||||||||||| || ||||||||| ||| |||| ||||||| ||||||||||||||||    
T  3921858 taactcatccttacagaatcagcttatgacgtgaggattttccccacttataaacacat 3921800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 196 - 258
Target Start/End: Original strand, 8001498 - 8001560
Alignment:
Q  196 gaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaattg 258  Q
    |||||||||||||| |||||| || | |||||  ||||| ||||||| |||||||||||||||    
T  8001498 gaaacctgatagcaggtggcccaacggatctttaaggagactctgataccatcttagaaattg 8001560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 20830741 - 20830667
Alignment:
Q  103 ttttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatg 177  Q
    ||||||||||||| ||||||||||||| |    |||| |||||| | ||||||||||||||| |||| |||||||    
T  20830741 ttttgtccgatgtaagactctttaacatacactctcacgaccagtattattgggcttggttcgtggaaataaatg 20830667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 178
Target Start/End: Complemental strand, 30256800 - 30256730
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatgg 178  Q
    ||||||||| ||||||| |||||| | | ||| ||||| |||| |||||||| |||| |||||||||||||    
T  30256800 tccgatgtgggactcttaaacacaccccatcacgaccaacactgttgggcttagttcgtggacataaatgg 30256730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 305 - 359
Target Start/End: Complemental strand, 30392722 - 30392668
Alignment:
Q  305 ccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    |||||||||||||||||||||||| || |||| | || ||||||||| |||||||    
T  30392722 ccacttataaacacatgttcatgttatcttttgtgtgttgtgagactttttaaca 30392668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 3823437 - 3823380
Alignment:
Q  196 gaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttaga 253  Q
    ||||||||||| |||||| |  || | |||||||||||||||||||| ||||||||||    
T  3823437 gaaacctgatatcaagtgtctcaacggatcttggaggaggctctgataccatcttaga 3823380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 360
Target Start/End: Original strand, 34847061 - 34847111
Alignment:
Q  308 cttataaacacatgttcatgtcatattttatctgatgtgagactctttaacaa 360  Q
    |||||||||||||||||||| || ||||||||| |  ||||||||||||||||    
T  34847061 cttataaacacatgttcatgccacattttatctca--tgagactctttaacaa 34847111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 10313964 - 10313897
Alignment:
Q  111 gatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggt 179  Q
    ||||||||||||||||||||| |||||||  |||| |||||||| | || |||| |||| |||||||||    
T  10313964 gatgtgagactctttaacaca-ctcctcacaaccaacactattgagtttagttcgtggatataaatggt 10313897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 19712851 - 19712792
Alignment:
Q  196 gaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    ||||||||||| || |||||| |||||||| || || |||||||||| |||||||||||||    
T  19712851 gaaacctgataacaggtggcccaaagaatcgtgaag-aggctctgataccatcttagaaat 19712792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 307 - 359
Target Start/End: Original strand, 26192479 - 26192531
Alignment:
Q  307 acttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    ||||||||||| ||||||||||||||| || || ||||||||||  |||||||    
T  26192479 acttataaacatatgttcatgtcatatcttgtccgatgtgagacaatttaaca 26192531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 2e-29; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 106 - 256
Target Start/End: Original strand, 14466270 - 14466418
Alignment:
Q  106 tgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgat 205  Q
    |||||||||||  |||||| |||||| | ||||| |||||||||||||||||||||||| ||||||||||||||| ||  ||| ||||  ||||||||||    
T  14466270 tgtccgatgtggaactctt-aacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgat 14466368  T
Q  206 agcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    | ||||||||| || | |||||||| ||||||||||| |||||||||||||    
T  14466369 aacaagtggcccaatggatcttgga-gaggctctgataccatcttagaaat 14466418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 108 - 256
Target Start/End: Original strand, 5711536 - 5711683
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 207  Q
    ||||||||| ||||||| |||||| | ||||| |||||||||||||||||||||||| ||||||||||||||| ||  ||| |||   ||||||||||||    
T  5711536 tccgatgtgggactctt-aacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcccgataacggaaacctgatag 5711634  T
Q  208 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    || |||| | || | |||||||||||||||||||| | |||||||||||    
T  5711635 caggtggtccaacggatcttggaggaggctctgatactatcttagaaat 5711683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 108 - 354
Target Start/End: Original strand, 37812365 - 37812611
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 207  Q
    ||||||||| ||||||| |||||| | ||||| |||||||| ||||||||||||||| ||||||||||  ||| ||  ||| |||| |||||||||||||    
T  37812365 tccgatgtgggactctt-aacacaccccctcacgaccagcattattgggcttggttcgtggacataaacagtgggtggcccgatagcagaaacctgatag 37812463  T
Q  208 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaatt-gagcataactcatcctt-caaaatcagcttgtgaggtgatgattttctc 305  Q
    || |||||| || | |||||||| ||||||| ||| |||| ||  || || | || |||||||||||| |||||||  |||||||||||| ||||  | |    
T  37812464 caggtggcccaatggatcttgga-gaggctccgataccatgttgtaatttggggcctaactcatccttacaaaatcgacttgtgaggtgaggattgcccc 37812562  T
Q  306 cacttataaacacatgttcatgtcatattttatctgatgtgagactctt 354  Q
    |||||||||||||||  ||| ||||| | ||||| |||||| |||||||    
T  37812563 cacttataaacacattgtcaggtcatgtcttatccgatgtgggactctt 37812611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 106 - 256
Target Start/End: Complemental strand, 2029993 - 2029845
Alignment:
Q  106 tgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgat 205  Q
    ||||||||||| ||||||| |||||| | ||||| |||||||||||||||||||||||| ||||||||||||||| ||   || ||||  ||||||| ||    
T  2029993 tgtccgatgtgggactctt-aacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggtccgatagcggaaacctaat 2029895  T
Q  206 agcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    |||| |||||| || | |||||||| ||||||||||| |||||||||||||    
T  2029894 agcaggtggcccaatggatcttgga-gaggctctgataccatcttagaaat 2029845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 108 - 256
Target Start/End: Complemental strand, 16419489 - 16419343
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 207  Q
    ||||||||| ||||||| |||||| | ||||| |||||||||||||| ||||||||| ||||||||||||||| ||  | | ||||  ||||||||||||    
T  16419489 tccgatgtgggactctt-aacacaccccctcacgaccagcactattgagcttggttcgtggacataaatggtgggtggctcgatagcggaaacctgatag 16419391  T
Q  208 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    || |||||| || | |||||||| ||||||||||| |||||||||||||    
T  16419390 caggtggcccaatggatcttgga-gaggctctgataccatcttagaaat 16419343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 108 - 256
Target Start/End: Original strand, 40379306 - 40379452
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 207  Q
    ||||||||| ||||||| |||||| ||||||| |||||||||| ||||||||||||| |||| |||||||||| ||  ||| ||||  ||||||||||||    
T  40379306 tccgatgtgggactctt-aacacacctcctcacgaccagcacttttgggcttggttcgtggatataaatggtgggtggcccgatagaggaaacctgatag 40379404  T
Q  208 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    || |||||| || | ||||||||  |||||||||| |||||||||||||    
T  40379405 caggtggcctaatggatcttgga-aaggctctgataccatcttagaaat 40379452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 103 - 256
Target Start/End: Original strand, 33381044 - 33381199
Alignment:
Q  103 ttttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagt--ttcccaataggagaaac 200  Q
    ||||||| |||||  | |||||||||||| ||||||| ||||||||||| |||| ||||||| |||||||||||| || ||   ||   |||| ||||||    
T  33381044 ttttgtctgatgtaggtctctttaacacatctcctcacgaccagcactactgggtttggttcgtggacataaatgatgggtgactcgagatagcagaaac 33381143  T
Q  201 ctgatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    ||| ||||| |||||| || |||||||| ||||| |||| || |||||||||||||    
T  33381144 ctgttagcatgtggcctaatgaatcttgaaggagactctaataccatcttagaaat 33381199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 108 - 258
Target Start/End: Original strand, 40149100 - 40149246
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 207  Q
    ||||||||||||||||| |||||| |  |||| |||||||||||||||||||||||| ||||||||||| ||| ||   || ||||  |||| |||||||    
T  40149100 tccgatgtgagactctt-aacacacc--ctcacgaccagcactattgggcttggttcgtggacataaatagtgggtggtccgatagctgaaatctgatag 40149196  T
Q  208 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaattg 258  Q
    || ||| || || | ||||| || ||||||||||| |||||||||||||||    
T  40149197 caggtgacccaatggatctt-gaagaggctctgataccatcttagaaattg 40149246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 106 - 216
Target Start/End: Original strand, 17525194 - 17525303
Alignment:
Q  106 tgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgat 205  Q
    |||||||||||||||| ||||||||| |  |||| ||||| |||||||||||||||||| ||||||||||||||| ||  ||| ||||  || |||||||    
T  17525194 tgtccgatgtgagact-tttaacacacccactcacgaccatcactattgggcttggttcgtggacataaatggtgggtggcccgatagcggatacctgat 17525292  T
Q  206 agcaagtggcc 216  Q
    |||| ||||||    
T  17525293 agcaggtggcc 17525303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 283 - 362
Target Start/End: Original strand, 30006621 - 30006700
Alignment:
Q  283 gcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaacaaat 362  Q
    ||||||| |||||||||| || ||||||||||||||||||||||| |||||||| |  || ||||||||||| |||||||    
T  30006621 gcttgtgtggtgatgattatccccacttataaacacatgttcatgccatattttgttcgacgtgagactcttcaacaaat 30006700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 202
Target Start/End: Original strand, 13250127 - 13250212
Alignment:
Q  117 agactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacct 202  Q
    ||||||||||||||| | ||||| ||||| ||||||||||| || ||| ||||||||||||||| ||  |||||||| ||||||||    
T  13250127 agactctttaacacatcccctcacgaccatcactattgggcatgcttcgtggacataaatggtgggtgccccaatagcagaaacct 13250212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 242
Target Start/End: Original strand, 18607142 - 18607238
Alignment:
Q  145 agcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggaggctctgat 242  Q
    |||||||||||||||||||| | ||||||||||||| ||| ||| |||   |||||||||||||| |||||| || | |||||||| |||||||||||    
T  18607142 agcactattgggcttggttcgtagacataaatggtgggttgcccgataacggaaacctgatagcatgtggcccaatggatcttgga-gaggctctgat 18607238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 256
Target Start/End: Original strand, 21383569 - 21383678
Alignment:
Q  147 cactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgcca 246  Q
    |||||||  ||||||| | |||| |||||| ||| ||  |||||||| |||||| |||||||| |||||| ||   |||||||||||||||||||| |||    
T  21383569 cactattaagcttggtgcctggatataaattgtgggtgacccaatagcagaaacttgatagcaggtggcccaacagatcttggaggaggctctgatacca 21383668  T
Q  247 tcttagaaat 256  Q
    ||||||||||    
T  21383669 tcttagaaat 21383678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 213
Target Start/End: Original strand, 33606151 - 33606255
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 207  Q
    ||||||||| ||||||| |||||| | ||||| ||||| ||||||| |||||||||| ||||||||||||||| ||  ||  ||||  ||||||||||||    
T  33606151 tccgatgtgggactctt-aacacaccacctcacgaccatcactattaggcttggttcgtggacataaatggtgggtggcctgatagcggaaacctgatag 33606249  T
Q  208 caagtg 213  Q
    ||||||    
T  33606250 caagtg 33606255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 108 - 256
Target Start/End: Original strand, 15124645 - 15124791
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 207  Q
    ||||||||| ||||||| |||||| | |||||  |||||||||||||| |||||||| |||||||||||||||  |  ||| |||    |||||||||||    
T  15124645 tccgatgtgggactctt-aacacatcccctcacaaccagcactattggacttggttcgtggacataaatggtggatgacccgataacgaaaacctgatag 15124743  T
Q  208 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    || |||| | || | |||||||| ||| ||||||| |||||||||||||    
T  15124744 caggtggtccaatggatcttgga-gagactctgataccatcttagaaat 15124791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 256
Target Start/End: Original strand, 93248 - 93362
Alignment:
Q  141 gaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggaggctctg 240  Q
    |||||||||||||||||||| ||| ||||||||| ||||| ||  ||| |||   |||| ||||||||| |||||| || | |||||||| |||||||||    
T  93248 gaccagcactattgggcttgattcgtggacataattggtgggtggcccgataacggaaagctgatagcaggtggcccaatggatcttgga-gaggctctg 93346  T
Q  241 atgccatcttagaaat 256  Q
    || |||||||| ||||    
T  93347 ataccatcttaaaaat 93362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 283 - 362
Target Start/End: Original strand, 30063309 - 30063388
Alignment:
Q  283 gcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaacaaat 362  Q
    ||||||| |||||||||| || ||||||||||||||||||||||| |||||||| |  || |||||| |||| |||||||    
T  30063309 gcttgtgtggtgatgattatccccacttataaacacatgttcatgccatattttgttcgacgtgagaatcttaaacaaat 30063388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 112 - 254
Target Start/End: Complemental strand, 13210745 - 13210604
Alignment:
Q  112 atgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaag 211  Q
    ||||| |||||||||||||| | ||||| | ||| |||||||| |||||||   |||   ||||||||| ||| ||| ||||  |||| ||||||||| |    
T  13210745 atgtgggactctttaacacaccccctcacg-ccaacactattgagcttggtgtgtgggtgtaaatggtgggttgcccgatagaggaaatctgatagcatg 13210647  T
Q  212 tggccaaaagaatcttggaggaggctctgatgccatcttagaa 254  Q
    ||||| || | |||||||||||| ||||||| |||||||||||    
T  13210646 tggcccaatggatcttggaggagtctctgataccatcttagaa 13210604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 136 - 254
Target Start/End: Complemental strand, 16533507 - 16533390
Alignment:
Q  136 ctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggagg 235  Q
    |||| ||||||||||||||| |||||||| ||||||||||||||| ||  ||| ||||   ||||||||||||| || ||| || | ||||| || ||||    
T  16533507 ctcacgaccagcactattggccttggttcgtggacataaatggtgggtggcccgatagcgaaaacctgatagcaggtagcccaatggatctt-gaagagg 16533409  T
Q  236 ctctgatgccatcttagaa 254  Q
    ||||||| |||| ||||||    
T  16533408 ctctgataccattttagaa 16533390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 157 - 258
Target Start/End: Complemental strand, 17719574 - 17719474
Alignment:
Q  157 cttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    |||||||| |||||||||||||||  |  ||  ||||| |||||||||||||| ||||||||| | |||||||| ||| || |||| |||||||||||||    
T  17719574 cttggttcgtggacataaatggtggatggccggataggggaaacctgatagcaggtggccaaatggatcttgga-gagactttgataccatcttagaaat 17719476  T
Q  257 tg 258  Q
    ||    
T  17719475 tg 17719474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 283 - 359
Target Start/End: Complemental strand, 15988255 - 15988179
Alignment:
Q  283 gcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    ||||||||||||| ||||| | ||||||||||| |||||| || | |||||||| ||||||||| ||||||| ||||    
T  15988255 gcttgtgaggtgaggatttcccccacttataaaaacatgtacaggccatattttgtctgatgtgggactcttaaaca 15988179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 103 - 183
Target Start/End: Complemental strand, 41069335 - 41069255
Alignment:
Q  103 ttttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagt 183  Q
    ||||||| |||| | ||||||||||||||   ||||| |||||| ||||||| ||||||||| |||||||||||| |||||    
T  41069335 ttttgtctgatgcgggactctttaacacactccctcacgaccagtactattgagcttggttcgtggacataaatgatgagt 41069255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 43819441 - 43819489
Alignment:
Q  311 ataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    |||||||||||||||||| || |||| ||||||||||||||||||||||    
T  43819441 ataaacacatgttcatgttattttttgtctgatgtgagactctttaaca 43819489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 144 - 255
Target Start/End: Complemental strand, 19110430 - 19110319
Alignment:
Q  144 cagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatg 243  Q
    ||||||||||| ||||||||| ||| |||||||| ||| |  ||| |||| | |||||| |||||| ||| || || | ||||||||| ||||| ||||     
T  19110430 cagcactattgagcttggttcgtgggcataaatgatgaatggcccgatagcaaaaacctaatagcaggtgacccaacggatcttggagtaggctttgata 19110331  T
Q  244 ccatcttagaaa 255  Q
    ||||||||||||    
T  19110330 ccatcttagaaa 19110319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 357
Target Start/End: Original strand, 7209092 - 7209142
Alignment:
Q  307 acttataaacacatgttcatgtcatattttatctgatgtgagactctttaa 357  Q
    ||||||||| ||||||||||||  |||||| ||||||||||||||||||||    
T  7209092 acttataaatacatgttcatgttgtattttgtctgatgtgagactctttaa 7209142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 307 - 352
Target Start/End: Complemental strand, 7748249 - 7748204
Alignment:
Q  307 acttataaacacatgttcatgtcatattttatctgatgtgagactc 352  Q
    ||||||||||||||||  |||||||||||| |||||||||||||||    
T  7748249 acttataaacacatgtctatgtcatattttgtctgatgtgagactc 7748204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 288 - 360
Target Start/End: Original strand, 13250304 - 13250376
Alignment:
Q  288 tgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaacaa 360  Q
    ||| |||| |||| ||| || |||||||||||||||||    || ||||||||||||||||||||||||||||    
T  13250304 tgatgtgaggattgtctgcatttataaacacatgttcaaacaatcttttatctgatgtgagactctttaacaa 13250376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 359
Target Start/End: Original strand, 19571008 - 19571092
Alignment:
Q  275 caaaatcagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    |||||||  ||| |||||||| ||||  | |||||||||||||||||||||  ||||  ||| || |||||||||||||||||||    
T  19571008 caaaatcgacttatgaggtgaggattgcccccacttataaacacatgttcagttcattatttgtccgatgtgagactctttaaca 19571092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 275 - 354
Target Start/End: Original strand, 40149037 - 40149116
Alignment:
Q  275 caaaatcagcttgtgaggtgatgattttctccacttataaacaca-tgttcatgtcatattttatctgatgtgagactctt 354  Q
    ||||||| ||||||||||||| |||| || ||||||||||||||| |||| | ||||| || |||| ||||||||||||||    
T  40149037 caaaatcggcttgtgaggtgaggattgtccccacttataaacacactgtt-aggtcatcttctatccgatgtgagactctt 40149116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 44404038 - 44404146
Alignment:
Q  124 ttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaatagg-agaaacctgatagcaagtggccaaaaga 222  Q
    |||||||| | | ||| ||||| |||||||||||||||||| ||||||||||| ||| ||  ||| |||||  |||||||||||||| |||| | || |     
T  44404038 ttaacacaccccatcacgaccaacactattgggcttggttcatggacataaatagtgggtgacccgataggcggaaacctgatagcaggtggtccaatgg 44404137  T
Q  223 atcttggag 231  Q
    |||||||||    
T  44404138 atcttggag 44404146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 358
Target Start/End: Original strand, 11099669 - 11099720
Alignment:
Q  307 acttataaacacatgttcatgtcatattttatctgatgtgagactctttaac 358  Q
    ||||||||||||||  ||| ||||| | ||||||||||||||||||||||||    
T  11099669 acttataaacacattgtcaggtcatctcttatctgatgtgagactctttaac 11099720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 359
Target Start/End: Complemental strand, 38629882 - 38629807
Alignment:
Q  284 cttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    |||||||| ||| |||| || | ||||||||| ||||  ||||||||| | ||||| |||||||||||||||||||    
T  38629882 cttgtgagatgaggattgtcccaacttataaatacattgtcatgtcatttcttatccgatgtgagactctttaaca 38629807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 103 - 237
Target Start/End: Original strand, 21383381 - 21383515
Alignment:
Q  103 ttttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacct 202  Q
    |||| ||||||| | |||||||||||||| | |||||   ||| |||||||| ||||||| | |||| ||||||  || ||  ||||||||  |||||||    
T  21383381 ttttatccgatgcgggactctttaacacaccccctcacacccaccactattgtgcttggtgcgtggatataaataatgggtggcccaatagcggaaacct 21383480  T
Q  203 gatagcaagtggccaaaagaatcttggaggaggct 237  Q
    ||||||| ||||||  |   |||||||||||||||    
T  21383481 gatagcaggtggcctgacagatcttggaggaggct 21383515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 263 - 320
Target Start/End: Original strand, 37812289 - 37812347
Alignment:
Q  263 taactcatcctt-caaaatcagcttgtgaggtgatgattttctccacttataaacacat 320  Q
    |||||||||||| |||||||  |||||||||||| |||| || ||||||||||||||||    
T  37812289 taactcatccttacaaaatcgacttgtgaggtgaggattgtccccacttataaacacat 37812347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 37828368 - 37828445
Alignment:
Q  102 attttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtg 180  Q
    |||||||||||||||||||| ||||||||| || || | | ||||| |||||||| |||||||  ||||| ||||||||    
T  37828368 attttgtccgatgtgagactatttaacacatct-ctaacggccagctctattgggtttggttcgcggacacaaatggtg 37828445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 112 - 256
Target Start/End: Complemental strand, 42895467 - 42895323
Alignment:
Q  112 atgtgagactctttaacaca-gctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaa 210  Q
    |||||||||||||||||||| |||| ||| ||||| ||||||| || |||||||  |||||||||||||| ||  ||| ||||  ||||| ||||| ||     
T  42895467 atgtgagactctttaacacacgctc-tcacgaccaacactattaggtttggttcagggacataaatggtgggtcgcccgatagcggaaacttgatatcag 42895369  T
Q  211 gtgg-ccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    |||| || || | ||||| || ||||||||||| ||||| |||||||    
T  42895368 gtggccctaatggatcttaga-gaggctctgataccatcatagaaat 42895323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 359
Target Start/End: Complemental strand, 30002032 - 30001979
Alignment:
Q  306 cacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    ||||||||||   |||||||| |||||| |||||| ||||||||||||||||||    
T  30002032 cacttataaatttatgttcatatcatatcttatcttatgtgagactctttaaca 30001979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 320
Target Start/End: Complemental strand, 37840379 - 37840342
Alignment:
Q  283 gcttgtgaggtgatgattttctccacttataaacacat 320  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  37840379 gcttgtgaggtgatgattgcctccacttataaacacat 37840342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 360
Target Start/End: Complemental strand, 38580929 - 38580876
Alignment:
Q  307 acttataaacacatgttcatgtcatattttatctgatgtgagactctttaacaa 360  Q
    |||||||||||| | |||| ||||| ||||||| ||||||| ||||||||||||    
T  38580929 acttataaacacgtattcaagtcattttttatccgatgtgaaactctttaacaa 38580876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 276 - 320
Target Start/End: Complemental strand, 9927960 - 9927916
Alignment:
Q  276 aaaatcagcttgtgaggtgatgattttctccacttataaacacat 320  Q
    |||||||||||||||||||| ||||  | ||||||||||||||||    
T  9927960 aaaatcagcttgtgaggtgaggattacccccacttataaacacat 9927916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 277 - 325
Target Start/End: Complemental strand, 11020606 - 11020558
Alignment:
Q  277 aaatcagcttgtgaggtgatgattttctccacttataaacacatgttca 325  Q
    ||||| ||||||||||||| ||||  |||||||||||||||||| ||||    
T  11020606 aaatcggcttgtgaggtgaggattgcctccacttataaacacattttca 11020558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 36 - 100
Target Start/End: Complemental strand, 27487624 - 27487560
Alignment:
Q  36 atcatcaaagaaatctagataatgaacatcattaaaatacaatcctagcactataagcaacttca 100  Q
    |||||||||| ||| ||  |||| |||||||| |||| |||| |||| |||||||||||||||||    
T  27487624 atcatcaaaggaatttacctaataaacatcatcaaaacacaagcctaacactataagcaacttca 27487560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 7e-29; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 102 - 359
Target Start/End: Original strand, 13574775 - 13575039
Alignment:
Q  102 attttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacc 201  Q
    ||||||||||||||| ||||||||||||||   ||||| ||| |||||||||||||||||||| ||||||||||||||| ||  | | ||||  ||||||    
T  13574775 attttgtccgatgtgggactctttaacacactccctcacgactagcactattgggcttggttcgtggacataaatggtgggtgacacgatagcggaaacc 13574874  T
Q  202 tgatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaa------ttgagcataactc-atccttcaaaatcagcttgtgaggtg 294  Q
    |||||||| |||||| || | |||||    |||||| |||| |||| |||||||      ||| || |||| | | ||  |||||   ||||||||||||    
T  13574875 tgatagcaggtggcccaatggatcttaactgaggctttgataccatattagaaattgtggttgggcctaacacaaccccacaaaactggcttgtgaggtg 13574974  T
Q  295 atgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    | ||||| | |||||||||||||||||| |||| |||||||| || |||||| ||||||||||||    
T  13574975 aggatttcccccacttataaacacatgtccatgccatattttgtccgatgtgggactctttaaca 13575039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 124 - 256
Target Start/End: Complemental strand, 16239799 - 16239667
Alignment:
Q  124 ttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaa 223  Q
    |||||||| | ||||| ||||| |||||||| ||||||||| ||||||||||||||| ||  | | |||   |||||||||||||| ||||||||| | |    
T  16239799 ttaacacaccccctcacgaccatcactattgagcttggttcgtggacataaatggtgggtggctcgataacggaaacctgatagcaggtggccaaacgga 16239700  T
Q  224 tcttggaggaggctctgatgccatcttagaaat 256  Q
    ||||||||||||||||||| |||||||||||||    
T  16239699 tcttggaggaggctctgataccatcttagaaat 16239667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 110 - 256
Target Start/End: Complemental strand, 4155544 - 4155400
Alignment:
Q  110 cgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagca 209  Q
    ||||||| ||||||| |||||| |  |||| |||||||||||||||||||||||| | |||||||| |||| ||  ||| ||||  ||||||||||||||    
T  4155544 cgatgtgggactctt-aacacaccctctcacgaccagcactattgggcttggttcgtcgacataaacggtgggtggcccgatagcggaaacctgatagca 4155446  T
Q  210 agtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
     |||||| || |||||||||| ||| ||||||| |||||||||||||    
T  4155445 ggtggcccaatgaatcttgga-gagactctgataccatcttagaaat 4155400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 108 - 272
Target Start/End: Complemental strand, 34992828 - 34992666
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 207  Q
    ||||||||| ||||||| |||||| | ||||| |||||||||||||||||||||||| ||||||||||||||| ||  ||| | ||  ||||||||||||    
T  34992828 tccgatgtgggactctt-aacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtgacccgacagcggaaacctgatag 34992730  T
Q  208 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaattgagcataactcatcc 272  Q
    || |||||| || | | |||||| ||| ||||||| |||||||| || | | || ||||||||||    
T  34992729 caggtggcccaatggaccttgga-gagactctgataccatcttaaaattggggcctaactcatcc 34992666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 108 - 254
Target Start/End: Original strand, 35038291 - 35038434
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 207  Q
    ||||||||| ||||||| |||||| | ||||| |||||| ||||||||||||||||| ||||||||||||||| | |  || ||||  |||||||||| |    
T  35038291 tccgatgtgggactctt-aacacaccccctcacgaccagtactattgggcttggttcgtggacataaatggtg-ggtggccgatagcggaaacctgattg 35038388  T
Q  208 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaa 254  Q
    || |||||| || | |||||||| ||||| ||||| |||||||||||    
T  35038389 caggtggcccaatggatcttgga-gaggcactgataccatcttagaa 35038434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 39683365 - 39683461
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgat 205  Q
    ||||||||| ||||||| |||||||  ||||| |||||||| ||||||||||||||| ||||||||||||||| ||  ||| |||| |||||||||||    
T  39683365 tccgatgtgggactctt-aacacagtccctcacgaccagcattattgggcttggttcgtggacataaatggtgggtggcccgatagcagaaacctgat 39683461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 147 - 251
Target Start/End: Complemental strand, 31151028 - 31150924
Alignment:
Q  147 cactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgcca 246  Q
    |||||||||||||||| | || | |||||||||||||  ||| |||   ||||||| ||||||||||||| || | |||||||||||||||||||| |||    
T  31151028 cactattgggcttggtgcatgtatataaatggtgagtgacccgataacggaaacctaatagcaagtggcccaacggatcttggaggaggctctgatacca 31150929  T
Q  247 tctta 251  Q
    |||||    
T  31150928 tctta 31150924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 254
Target Start/End: Original strand, 22775490 - 22775641
Alignment:
Q  103 ttttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacct 202  Q
    |||| ||| ||||| ||||| | |||||| | ||||| | ||| |||||||||| ||||| | |||| |||||||||| ||  ||| |||| ||||||||    
T  22775490 ttttatccaatgtgggactcctaaacacaccacctcatgcccaacactattgggattggtgcatggatataaatggtgggtggcccgatagcagaaacct 22775589  T
Q  203 gatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaa 254  Q
     |||||| |||||| ||   |||||| ||||||||||||| |||||||||||    
T  22775590 aatagcaggtggcccaatagatcttgaaggaggctctgataccatcttagaa 22775641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 136 - 216
Target Start/End: Original strand, 20327738 - 20327818
Alignment:
Q  136 ctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggcc 216  Q
    |||| ||||| |||||||||||||||||| ||||||||||||||| ||  ||| ||||  |||||||||||||| ||||||    
T  20327738 ctcacgaccaacactattgggcttggttcctggacataaatggtgggtggcccgatagcggaaacctgatagcaggtggcc 20327818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 275 - 331
Target Start/End: Complemental strand, 31317516 - 31317460
Alignment:
Q  275 caaaatcagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcat 331  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||  |||||||||    
T  31317516 caaaatcggcttgtgaggtgatgattttccccacttataaacacattgtcatgtcat 31317460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 141 - 258
Target Start/End: Original strand, 20303279 - 20303395
Alignment:
Q  141 gaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggaggctctg 240  Q
    ||||| ||||||||| |||||||| ||||||||||||||| ||   || ||||  |||||||||||||| |||||| || | || || || |||||||||    
T  20303279 gaccaacactattggacttggttcgtggacataaatggtgggtggaccgatagtggaaacctgatagcaggtggcccaatggattttaga-gaggctctg 20303377  T
Q  241 atgccatcttagaaattg 258  Q
    || |||| ||||||||||    
T  20303378 ataccatattagaaattg 20303395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 360
Target Start/End: Original strand, 30179751 - 30179827
Alignment:
Q  284 cttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaacaa 360  Q
    |||||||||||| ||||  | ||||||||||||||||  ||| ||||| | |||||||||||| |||||||||||||    
T  30179751 cttgtgaggtgaggattacccccacttataaacacattgtcaggtcatctcttatctgatgtgggactctttaacaa 30179827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 359
Target Start/End: Complemental strand, 26916408 - 26916362
Alignment:
Q  313 aaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    ||||||| ||||||||||| ||||||||| |||||||||||||||||    
T  26916408 aaacacaagttcatgtcatcttttatctgttgtgagactctttaaca 26916362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 285 - 359
Target Start/End: Complemental strand, 41915211 - 41915137
Alignment:
Q  285 ttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    ||||||||||| ||||  | ||||||||||||||||||||||||||| | || ||  ||||| ||||||||||||    
T  41915211 ttgtgaggtgaggattgcccccacttataaacacatgttcatgtcatctcttttccaatgtgggactctttaaca 41915137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 258
Target Start/End: Complemental strand, 45828238 - 45828093
Alignment:
Q  103 ttttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacct 202  Q
    |||||||||||||| |||||||||||||| | ||||| ||||||| ||||||||         ||||||||||||||| ||  | | ||||  |||||||    
T  45828238 ttttgtccgatgtgggactctttaacacaccccctcacgaccagc-ctattggg--------gtggacataaatggtgggtggctcgatagcggaaacct 45828148  T
Q  203 gatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaattg 258  Q
    | ||||| |||||  || | |||||||| ||||||||||| |||||||||||||||    
T  45828147 ggtagcaggtggcgcaatggatcttgga-gaggctctgataccatcttagaaattg 45828093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 281 - 346
Target Start/End: Original strand, 8487553 - 8487617
Alignment:
Q  281 cagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtg 346  Q
    ||||||||||||||| |||| || ||||||||||||||||||||||| ||| |||| ||| |||||    
T  8487553 cagcttgtgaggtgaggattgtc-ccacttataaacacatgttcatgccatcttttgtctcatgtg 8487617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 12930075 - 12930136
Alignment:
Q  195 agaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    ||||||||||||||| |||||| || | ||| ||||||||||| |||| |||||||||||||    
T  12930075 agaaacctgatagcaggtggcccaacggatcatggaggaggctttgataccatcttagaaat 12930136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 19954340 - 19954385
Alignment:
Q  135 cctcaggaccagcactattgggcttggttcttggacataaatggtg 180  Q
    ||||| |||||| ||||||||||||||||| |||||||||||||||    
T  19954340 cctcacgaccagtactattgggcttggttcgtggacataaatggtg 19954385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 305 - 354
Target Start/End: Complemental strand, 21387375 - 21387326
Alignment:
Q  305 ccacttataaacacatgttcatgtcatattttatctgatgtgagactctt 354  Q
    ||||||||||||| ||||||||||||| |||||||||| ||| |||||||    
T  21387375 ccacttataaacatatgttcatgtcatcttttatctgaagtgggactctt 21387326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 180
Target Start/End: Complemental strand, 31317438 - 31317382
Alignment:
Q  124 ttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtg 180  Q
    |||||||| | ||||| |||||||||||||| | ||||||| |||||||||||||||    
T  31317438 ttaacacaccccctcacgaccagcactattgagtttggttcgtggacataaatggtg 31317382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 283 - 359
Target Start/End: Complemental strand, 45828288 - 45828212
Alignment:
Q  283 gcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    ||||||||||||  ||||  | ||||||||||||||||||||| | ||| |||| || |||||| ||||||||||||    
T  45828288 gcttgtgaggtggagattgcccccacttataaacacatgttcaggccatcttttgtccgatgtgggactctttaaca 45828212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 46139446 - 46139362
Alignment:
Q  147 cactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggag 231  Q
    |||||||||||||||||  || |||||||||||| ||  ||| |||| ||||||||||||||| ||| || || | |||||||||    
T  46139446 cactattgggcttggtttgtgaacataaatggtgggtggcccgatagcagaaacctgatagcaggtgacccaatggatcttggag 46139362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 256
Target Start/End: Original strand, 15019390 - 15019524
Alignment:
Q  121 tctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaa 220  Q
    ||||||||||| | ||||  ||||| |||||||| ||||||||| ||||  ||||||||| |||  || ||||   ||| ||||||| | |||||| ||     
T  15019390 tctttaacacatcccctcccgacca-cactattgagcttggttcgtggatttaaatggtgggttatccgatagcgaaaatctgatagtaggtggcccaat 15019488  T
Q  221 gaatcttggaggaggctctgatgccatcttagaaat 256  Q
    |||||| |||||| ||||| || |||||||||||||    
T  15019489 gaatctcggaggatgctctaataccatcttagaaat 15019524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 357
Target Start/End: Original strand, 27484890 - 27484941
Alignment:
Q  306 cacttataaacacatgttcatgtcatattttatctgatgtgagactctttaa 357  Q
    ||||||||||||||||||||  |||| |||||||  ||||||||||||||||    
T  27484890 cacttataaacacatgttcaactcatcttttatccaatgtgagactctttaa 27484941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 141 - 214
Target Start/End: Complemental strand, 49629796 - 49629722
Alignment:
Q  141 gaccagcactattgggcttggttcttggacataaatggtgagtttc-ccaataggagaaacctgatagcaagtgg 214  Q
    ||||| |||||||||||||||||  ||||||||||||||| | | | || |||| ||||||||||||||| ||||    
T  49629796 gaccaacactattgggcttggtttatggacataaatggtgggatgctccgatagcagaaacctgatagcaggtgg 49629722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 305 - 359
Target Start/End: Original strand, 50052830 - 50052884
Alignment:
Q  305 ccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    ||||||||||||||||| ||| | |||||||| || |||||| ||||||||||||    
T  50052830 ccacttataaacacatggtcaggccatattttgtccgatgtgggactctttaaca 50052884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 285 - 359
Target Start/End: Complemental strand, 50930742 - 50930668
Alignment:
Q  285 ttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    ||||||||||| ||||  | ||||||||||||||||||| | | ||| ||||||| |||||| || |||||||||    
T  50930742 ttgtgaggtgaggattgcccccacttataaacacatgttaaggccatcttttatcagatgtgggagtctttaaca 50930668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 177
Target Start/End: Original strand, 272507 - 272572
Alignment:
Q  112 atgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatg 177  Q
    ||||||||||| ||||||||  |||||| ||| |||||| ||| ||||| ||| ||||||||||||    
T  272507 atgtgagactcattaacacacttcctcacgacaagcactgttgagcttgattcatggacataaatg 272572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 320
Target Start/End: Original strand, 3975392 - 3975437
Alignment:
Q  275 caaaatcagcttgtgaggtgatgattttctccacttataaacacat 320  Q
    ||||||| ||||| |||||||||||| || ||||||||||||||||    
T  3975392 caaaatcggcttgagaggtgatgattatccccacttataaacacat 3975437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 209
Target Start/End: Original strand, 20303188 - 20303261
Alignment:
Q  136 ctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagca 209  Q
    |||| |||||||||| |||| |||||||| ||||||||||||||| ||   || ||||  ||||||||||||||    
T  20303188 ctcacgaccagcactgttggacttggttcgtggacataaatggtgggtggaccgatagcggaaacctgatagca 20303261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 256
Target Start/End: Complemental strand, 39620201 - 39620168
Alignment:
Q  223 atcttggaggaggctctgatgccatcttagaaat 256  Q
    |||||||||||||||||||| |||||||||||||    
T  39620201 atcttggaggaggctctgataccatcttagaaat 39620168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 135 - 175
Target Start/End: Original strand, 21808835 - 21808875
Alignment:
Q  135 cctcaggaccagcactattgggcttggttcttggacataaa 175  Q
    ||||| |||||||||||||||||||||||| ||| ||||||    
T  21808835 cctcacgaccagcactattgggcttggttcgtgggcataaa 21808875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 54568027 - 54567968
Alignment:
Q  196 gaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    |||||||||||||| |||||  || | ||||||||| |||||||||| |||||||||||||    
T  54568027 gaaacctgatagcaggtggctcaatggatcttggag-aggctctgataccatcttagaaat 54567968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 3e-28; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 108 - 256
Target Start/End: Original strand, 28245623 - 28245769
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 207  Q
    ||||||||||||||||| |||||| | | ||| |||||||||||||||||||||||| ||||||||||||||| ||  ||| ||||  ||||||||||||    
T  28245623 tccgatgtgagactctt-aacacaccccatcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgatag 28245721  T
Q  208 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    || |||||| || | |||||||| ||||||||||| |||| ||||||||    
T  28245722 caggtggcccaatggatcttgga-gaggctctgataccatattagaaat 28245769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 135 - 256
Target Start/End: Complemental strand, 35788856 - 35788735
Alignment:
Q  135 cctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggag 234  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||| ||  ||  |||   |||||||||||||| |||||| || | ||||||||||||    
T  35788856 cctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcctgataacggaaacctgatagcaggtggcccaacggatcttggaggag 35788757  T
Q  235 gctctgatgccatcttagaaat 256  Q
    |||||||| |||||||||||||    
T  35788756 gctctgataccatcttagaaat 35788735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 142 - 256
Target Start/End: Original strand, 35819023 - 35819136
Alignment:
Q  142 accagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggaggctctga 241  Q
    ||||||||||||||||||||||| ||||||||||||||| ||  ||| ||||  |||||||||||||| |||||| || | ||||| || ||| ||||||    
T  35819023 accagcactattgggcttggttcgtggacataaatggtgggtgacccgatagcggaaacctgatagcaggtggcccaatggatcttaga-gagactctga 35819121  T
Q  242 tgccatcttagaaat 256  Q
    |||||||||| ||||    
T  35819122 tgccatcttaaaaat 35819136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 123 - 256
Target Start/End: Complemental strand, 52559777 - 52559643
Alignment:
Q  123 tttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtgg-ccaaaag 221  Q
    ||||||||| | |||||  ||||||||||||||||||||||| ||||||||||||||| ||  ||| |||  | |||| |||||||| |||| ||||| |    
T  52559777 tttaacacaccccctcacaaccagcactattgggcttggttcgtggacataaatggtgggtggcccgataacataaacttgatagcaggtggcccaaacg 52559678  T
Q  222 aatcttggaggaggctctgatgccatcttagaaat 256  Q
     ||||| |||||||||||||| | |||||||||||    
T  52559677 gatctttgaggaggctctgatactatcttagaaat 52559643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 111 - 256
Target Start/End: Complemental strand, 6218423 - 6218280
Alignment:
Q  111 gatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaa 210  Q
    |||||||||||||| |||||| | ||||| ||||||||||||||||||||||||||| ||||||||| || ||  ||  ||||  |||||||||||| |     
T  6218423 gatgtgagactctt-aacacaccccctcacgaccagcactattgggcttggttcttgtacataaatgatgggtgacctgatagcggaaacctgatagtag 6218325  T
Q  211 gtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    |||  | || | |||||||| ||||||||||| |||||||||||||    
T  6218324 gtgatccaatggatcttgga-gaggctctgataccatcttagaaat 6218280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 108 - 295
Target Start/End: Original strand, 27634178 - 27634365
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 207  Q
    ||||||||| ||||||| |||||  | ||||| |||||||||||||||||||||||| ||||||||||  ||| ||   || |||| |||||||||||||    
T  27634178 tccgatgtgggactctt-aacaccccccctcacgaccagcactattgggcttggttcgtggacataaacagtgggtggtccgatagcagaaacctgatag 27634276  T
Q  208 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaatt-gagcataactcatcctt-caaaatcagcttgtgaggtga 295  Q
    ||||||| | || | |||||||| ||||||||||| |||| ||  || || | || |||||||||||| ||||||| |||||| ||||||    
T  27634277 caagtggtccaatggatcttgga-gaggctctgataccatgttgtaatttggggcctaactcatccttacaaaatcggcttgtaaggtga 27634365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 124 - 256
Target Start/End: Original strand, 22231185 - 22231316
Alignment:
Q  124 ttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaa 223  Q
    |||||||| | ||||| ||  |||||||||||||||||||| ||||||||||||||  ||  ||| ||||  |||||||||||||| |||||| || | |    
T  22231185 ttaacacatcccctcatgatgagcactattgggcttggttcgtggacataaatggtaggtggcccgatagcggaaacctgatagcaggtggcccaatgga 22231284  T
Q  224 tcttggaggaggctctgatgccatcttagaaat 256  Q
    | ||||| ||||||||||| |||||||||||||    
T  22231285 ttttgga-gaggctctgataccatcttagaaat 22231316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 105 - 216
Target Start/End: Original strand, 5398569 - 5398679
Alignment:
Q  105 ttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctga 204  Q
    |||||||||||| ||||||| |||||| | ||||| ||||||||||||| |||||||||| ||||||||||||||| ||   || ||||  |||||||||    
T  5398569 ttgtccgatgtgggactctt-aacacaccccctcacgaccagcactatttggcttggttcgtggacataaatggtgggtggtccgatagcggaaacctga 5398667  T
Q  205 tagcaagtggcc 216  Q
    ||||| ||||||    
T  5398668 tagcaggtggcc 5398679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 106 - 256
Target Start/End: Original strand, 35796837 - 35796985
Alignment:
Q  106 tgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgat 205  Q
    |||||||||||  |||||| |||||| | ||||| |||||||||||||||||||||||| |||| |||||||||| ||  ||| ||||  ||||||||||    
T  35796837 tgtccgatgtggaactctt-aacacaccccctcacgaccagcactattgggcttggttcgtggagataaatggtgggtggcccgatagcggaaacctgat 35796935  T
Q  206 agcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    |||| || | | || | ||| | || ||||||||||| |||||||||||||    
T  35796936 agcaggtagtccaatggatc-tcgaagaggctctgataccatcttagaaat 35796985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 106 - 256
Target Start/End: Original strand, 40717301 - 40717449
Alignment:
Q  106 tgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgat 205  Q
    |||| |||||| ||||||| |||||| | ||||| ||||||||||||| |||||||||  ||||||||||||||| ||   || ||||  ||||||||||    
T  40717301 tgtctgatgtgggactctt-aacacaccccctcacgaccagcactattaggcttggtttgtggacataaatggtgggtggtccgatagcggaaacctgat 40717399  T
Q  206 agcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
     ||| |||||| || | || ||||| ||||||||||| |||||||||||||    
T  40717400 ggcaggtggcccaatggatattgga-gaggctctgataccatcttagaaat 40717449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 43743211 - 43743132
Alignment:
Q  104 tttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagt 183  Q
    ||||||||||||||||||||||||||||   |||||  ||||||| ||||||| ||||||| |||||||||||| |||||    
T  43743211 tttgtccgatgtgagactctttaacacactccctcacaaccagcattattgggtttggttcgtggacataaatgatgagt 43743132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 256
Target Start/End: Original strand, 50543442 - 50543575
Alignment:
Q  124 ttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaa--aag 221  Q
    |||||||| | ||||| ||||| |||||||||||||||||| ||||||||||||||| ||  ||| |||   |||||||||||||| |||| |||  | |    
T  50543442 ttaacacaccccctcacgaccaacactattgggcttggttcgtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggtcaaatatg 50543541  T
Q  222 aatcttggaggaggctctgatgccatcttagaaat 256  Q
     |||||||| |||||||||||  ||||||||||||    
T  50543542 gatcttgga-gaggctctgatatcatcttagaaat 50543575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 253 - 359
Target Start/End: Original strand, 18981532 - 18981634
Alignment:
Q  253 aaattgagcataactcatcctt-caaaatcagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagact 351  Q
    |||||||||||||||||||||| ||||| |  |||||||||||  |||    ||||||||||||||||||||||||| || |||||| |||||||| |||    
T  18981532 aaattgagcataactcatccttacaaaaccgacttgtgaggtggggat----tccacttataaacacatgttcatgttatcttttatttgatgtga-act 18981626  T
Q  352 ctttaaca 359  Q
    ||||||||    
T  18981627 ctttaaca 18981634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 103 - 256
Target Start/End: Complemental strand, 7926550 - 7926404
Alignment:
Q  103 ttttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacct 202  Q
    |||||||||||||| |||||||||||||| | ||||| ||| | || ||||||||||||||| |||      ||| || ||  ||| ||||  |||||||    
T  7926550 ttttgtccgatgtgggactctttaacacaccccctcacgactaccattattgggcttggttcgtgg------atgatgggtggccctatagtggaaacct 7926457  T
Q  203 gatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    ||||||| |||||| || | |||||||| ||||||||||| ||||||| |||||    
T  7926456 gatagcaggtggcccaatggatcttgga-gaggctctgataccatcttcgaaat 7926404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 226 - 354
Target Start/End: Original strand, 20726803 - 20726937
Alignment:
Q  226 ttggaggaggctctgatgccatcttagaa-----attgagcataactcatccttcaaaatcag-cttgtgaggtgatgattttctccacttataaacaca 319  Q
    ||||||||||||||||| ||||||||||      |||| || ||||||||||||  ||| | | |||  ||||||| ||||  | |||||||||||||||    
T  20726803 ttggaggaggctctgataccatcttagattttatattgggcctaactcatccttataaaactgactttggaggtgaggattgcccccacttataaacaca 20726902  T
Q  320 tgttcatgtcatattttatctgatgtgagactctt 354  Q
    |||||||||||| |||| | |||||||||||||||    
T  20726903 tgttcatgtcatcttttgtttgatgtgagactctt 20726937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 112 - 258
Target Start/End: Complemental strand, 31945141 - 31944997
Alignment:
Q  112 atgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaag 211  Q
    ||||||||||||||||||||  |||||| ||| ||| |||||||| ||||||  | ||||||||||||  ||   || |||| |||||||| |||||| |    
T  31945141 atgtgagactctttaacacacatcctcacgactagccctattgggtttggtttgtagacataaatggtaggtggtccgatagcagaaacctaatagcatg 31945042  T
Q  212 tggccaaaagaatcttggaggaggctctgatgccatcttagaaattg 258  Q
    ||| ||| || |||||||| ||| |||||||| ||| ||||||||||    
T  31945041 tggtcaatag-atcttgga-gagactctgatgtcattttagaaattg 31944997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 209
Target Start/End: Original strand, 5398305 - 5398407
Alignment:
Q  105 ttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctga 204  Q
    |||||| ||||| ||||||| |||||| | ||||| ||||| || ||||||||||||||| ||||||||||||||| ||   || ||||| |||||||||    
T  5398305 ttgtccaatgtgggactctt-aacacacc-cctcacgaccaacattattgggcttggttcgtggacataaatggtgggtggtccgataggggaaacctga 5398402  T
Q  205 tagca 209  Q
    |||||    
T  5398403 tagca 5398407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 283 - 359
Target Start/End: Original strand, 12005511 - 12005587
Alignment:
Q  283 gcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    ||||||||||||| ||||  | |||||||| |||| ||||||||| |||||||| || |||||| ||||||||||||    
T  12005511 gcttgtgaggtgaggattgcccccacttattaacaaatgttcatgccatattttgtccgatgtgggactctttaaca 12005587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 12005560 - 12005642
Alignment:
Q  102 attttgtccgatgtgagactctttaacaca-gctcctcaggaccagcactattgggc---ttggttcttggacataaatggtg 180  Q
    ||||||||||||||| ||||||||||||||  | ||||| |||||||||||||||||   ||||||| | |||||||||||||    
T  12005560 attttgtccgatgtgggactctttaacacacacccctcacgaccagcactattgggcttgttggttcgttgacataaatggtg 12005642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 307 - 359
Target Start/End: Complemental strand, 31943381 - 31943329
Alignment:
Q  307 acttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    ||||||||||||||||||||||  |||||||||||| || |||||||||||||    
T  31943381 acttataaacacatgttcatgttttattttatctgaggtaagactctttaaca 31943329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 118 - 241
Target Start/End: Original strand, 25324140 - 25324263
Alignment:
Q  118 gactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggcca 217  Q
    |||||||||||||| | |||||   |||  ||||||||||||||| | | || |||||||||| ||  ||| ||||  ||||| |||||||| ||||||     
T  25324140 gactctttaacacaccccctcacacccaatactattgggcttggtgcgtagatataaatggtgggtggcccgatagcggaaacttgatagcaggtggccc 25324239  T
Q  218 aaagaatcttggaggaggctctga 241  Q
    || | |||||||||||||||||||    
T  25324240 aatggatcttggaggaggctctga 25324263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 103 - 258
Target Start/End: Original strand, 30530018 - 30530172
Alignment:
Q  103 ttttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacct 202  Q
    ||||| ||||||||| |||||||||||||   |||||  |||| |||||||| ||||||||| |   |||  |||||| ||  | | ||||  |||| ||    
T  30530018 ttttgcccgatgtgaaactctttaacacacaccctcacaaccatcactattgagcttggttcataagcatcgatggtgggtgacgcgatagcggaaatct 30530117  T
Q  203 gatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaattg 258  Q
    ||||||| |||||| || | ||||||||| |||||||||| |||||||||||||||    
T  30530118 gatagcaggtggcctaatggatcttggag-aggctctgataccatcttagaaattg 30530172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 359
Target Start/End: Original strand, 8904535 - 8904585
Alignment:
Q  309 ttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    ||||||||| ||||||||||||| |||| |||||||||||||||| |||||    
T  8904535 ttataaacaaatgttcatgtcatcttttgtctgatgtgagactctctaaca 8904585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 1216035 - 1215990
Alignment:
Q  135 cctcaggaccagcactattgggcttggttcttggacataaatggtg 180  Q
    ||||| |||||||| ||||| |||||||||||||||||||||||||    
T  1216035 cctcacgaccagcattattgagcttggttcttggacataaatggtg 1215990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 17111752 - 17111685
Alignment:
Q  111 gatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtg 180  Q
    |||||| ||||||| ||||| |||||||| ||||| ||||||| ||||||||||||||||||| ||||||    
T  17111752 gatgtgggactctt-aacac-gctcctcacgaccaacactattaggcttggttcttggacatatatggtg 17111685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 285 - 357
Target Start/End: Complemental strand, 21041391 - 21041319
Alignment:
Q  285 ttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaa 357  Q
    ||||||||||| ||||||| |||||||||||||||||||   | ||| |||| || |||||| ||||||||||    
T  21041391 ttgtgaggtgaggattttccccacttataaacacatgttttggccatcttttgtccgatgtgggactctttaa 21041319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 283 - 323
Target Start/End: Complemental strand, 33107912 - 33107872
Alignment:
Q  283 gcttgtgaggtgatgattttctccacttataaacacatgtt 323  Q
    ||||||||||||| |||| ||||||||||||||||||||||    
T  33107912 gcttgtgaggtgaagattgtctccacttataaacacatgtt 33107872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 354
Target Start/End: Complemental strand, 6218481 - 6218410
Alignment:
Q  283 gcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctt 354  Q
    ||||||||||||||||||  | ||||||||||||||||  | | ||||| |  |||||||||||||||||||    
T  6218481 gcttgtgaggtgatgattgcccccacttataaacacattgttaggtcatctcctatctgatgtgagactctt 6218410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 360
Target Start/End: Complemental strand, 21393364 - 21393309
Alignment:
Q  305 ccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaacaa 360  Q
    |||||||||  |||||||||| ||||||||||||||| ||||||||| || |||||    
T  21393364 ccacttatatgcacatgttcaagtcatattttatctgttgtgagactattcaacaa 21393309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 254
Target Start/End: Complemental strand, 22822535 - 22822428
Alignment:
Q  147 cactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgcca 246  Q
    ||||||||| |||||| | ||||  || |||||||||  ||| ||||  |||||||||||||| || ||| || || ||||| ||||||||||||| | |    
T  22822535 cactattggacttggtgcgtggatgtatatggtgagtggcccgatagcggaaacctgatagcaggtagcccaacgagtcttgtaggaggctctgatacaa 22822436  T
Q  247 tcttagaa 254  Q
    ||||||||    
T  22822435 tcttagaa 22822428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 361
Target Start/End: Complemental strand, 23209860 - 23209806
Alignment:
Q  306 cacttataaacacatgttcatgtcatattttatctgatgtgagactctttaacaaa 361  Q
    |||||||||||||||||||| |||||||||| || ||| | |||||||||||||||    
T  23209860 cacttataaacacatgttca-gtcatattttgtccgatataagactctttaacaaa 23209806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 357
Target Start/End: Complemental strand, 33108126 - 33108075
Alignment:
Q  306 cacttataaacacatgttcatgtcatattttatctgatgtgagactctttaa 357  Q
    |||||||||||||||||| |||||||||||| |  ||||| |||||||||||    
T  33108126 cacttataaacacatgtttatgtcatattttgttcgatgtaagactctttaa 33108075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 255
Target Start/End: Original strand, 40716569 - 40716628
Alignment:
Q  196 gaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaa 255  Q
    |||||||||||||| |||||| || | ||| |||| ||||||||||| ||||||||||||    
T  40716569 gaaacctgatagcaggtggcccaacggatcgtggatgaggctctgataccatcttagaaa 40716628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 118 - 180
Target Start/End: Complemental strand, 1215968 - 1215906
Alignment:
Q  118 gactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtg 180  Q
    ||||||||||||||   ||| | ||||| ||||||||| |||||||| |||||||||||||||    
T  1215968 gactctttaacacactcccttatgaccaacactattggacttggttcgtggacataaatggtg 1215906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 196 - 254
Target Start/End: Complemental strand, 4464431 - 4464373
Alignment:
Q  196 gaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaa 254  Q
    |||||||||||||| ||| || || | |||||| ||||||||||||| |||||||||||    
T  4464431 gaaacctgatagcatgtgacccaatggatcttgaaggaggctctgataccatcttagaa 4464373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 118 - 216
Target Start/End: Original strand, 6666506 - 6666604
Alignment:
Q  118 gactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggcc 216  Q
    ||||||||||||||   ||||| | | |||||||||||||||||| | |||| |||||||||| ||  ||| |||| |||| ||| |||||| ||||||    
T  6666506 gactctttaacacacaccctcacgcctagcactattgggcttggtgcatggatataaatggtgggtgacccgatagaagaatccttatagcaggtggcc 6666604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 214
Target Start/End: Original strand, 6778540 - 6778645
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 207  Q
    ||||||||| ||||||| |||||| | ||||| || |||||||||| || ||||||| | ||||||||||| | ||  ||| ||||  ||||||||||||    
T  6778540 tccgatgtgggactctt-aacacaccccctcacgatcagcactattaggtttggttcgtagacataaatggggggtggcccgatagcggaaacctgatag 6778638  T
Q  208 caagtgg 214  Q
    || ||||    
T  6778639 catgtgg 6778645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 14119292 - 14119358
Alignment:
Q  34 acatcatcaaagaaatctagataatgaacatcattaaaatacaatcctagcactataagcaacttca 100  Q
    |||||||||||  ||||||| |||| |||||||| |||| |||| |||| |||||| ||||||||||    
T  14119292 acatcatcaaaagaatctagctaataaacatcatcaaaacacaaacctaacactatgagcaacttca 14119358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 275 - 345
Target Start/End: Complemental strand, 26030362 - 26030293
Alignment:
Q  275 caaaatcagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgt 345  Q
    |||||||| ||| ||| |||| |||| || ||| ||||||||||||||||||| ||||||||||| |||||    
T  26030362 caaaatcaacttatgaagtgaggattgtc-ccatttataaacacatgttcatgccatattttatccgatgt 26030293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 35645279 - 35645369
Alignment:
Q  126 aacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggcc 216  Q
    |||||| | ||||| ||||||||| |||||| ||||||| ||||||||||||| | ||  ||| ||||  ||||| |||||||| ||||||    
T  35645279 aacacaccccctcacgaccagcacaattgggtttggttcgtggacataaatggcgggtggcccgatagcggaaacttgatagcatgtggcc 35645369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 35645568 - 35645658
Alignment:
Q  126 aacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggcc 216  Q
    |||||| | ||||| ||||||||| |||||| ||||||| ||||||||||||| | ||  ||| ||||  ||||| |||||||| ||||||    
T  35645568 aacacaccccctcacgaccagcacaattgggtttggttcgtggacataaatggcgggtggcccgatagcggaaacttgatagcatgtggcc 35645658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 256
Target Start/End: Complemental strand, 4645838 - 4645718
Alignment:
Q  135 cctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggag 234  Q
    ||||| ||||| |||| ||||||||| ||| ||||||||| ||||| ||  ||| ||||  |||||||||||||| ||| || || | ||||| || |||    
T  4645838 cctcacgaccaacacttttgggcttgattcgtggacataattggtgggtggcccgatagcggaaacctgatagcaggtgacccaatggatctttga-gag 4645740  T
Q  235 gctctgatgccatcttagaaat 256  Q
    |||||||| | |||||| ||||    
T  4645739 gctctgatactatcttataaat 4645718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 256
Target Start/End: Original strand, 4905644 - 4905744
Alignment:
Q  155 ggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaa 254  Q
    |||||| ||| || |||||||||||| ||  ||| |||| |||||||| |||||| |||||| || | | |||||| |||||||||||  ||||||||||    
T  4905644 ggcttgattcgtgaacataaatggtgggtggcccgatagcagaaacctaatagcaggtggcccaatggagcttgga-gaggctctgatatcatcttagaa 4905742  T
Q  255 at 256  Q
    ||    
T  4905743 at 4905744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 21646390 - 21646435
Alignment:
Q  135 cctcaggaccagcactattgggcttggttcttggacataaatggtg 180  Q
    ||||| ||||| ||||||||| |||||||| |||||||||||||||    
T  21646390 cctcacgaccaacactattggacttggttcatggacataaatggtg 21646435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 360
Target Start/End: Complemental strand, 30971743 - 30971690
Alignment:
Q  307 acttataaacacatgttcatgtcatattttatctgatgtgagactctttaacaa 360  Q
    ||||||||||| || || | |||||||||||| ||||||||||||| |||||||    
T  30971743 acttataaacatatatttaagtcatattttatttgatgtgagactcattaacaa 30971690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 7572615 - 7572710
Alignment:
Q  155 ggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgccatctta 251  Q
    |||||||| | |||| |||||||||| ||  ||||||||  |||||||||||| | |||| | || | ||||||| |||||||||||| ||||||||    
T  7572615 ggcttggtgcatggatataaatggtgggtggcccaatagcggaaacctgatagaaggtggtccaacg-atcttggtggaggctctgataccatctta 7572710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 11053951 - 11053999
Alignment:
Q  311 ataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    |||| |||||||||||||||| | || |||||||| |||||||||||||    
T  11053951 ataagcacatgttcatgtcatctcttctctgatgtaagactctttaaca 11053999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 305 - 361
Target Start/End: Original strand, 11056396 - 11056452
Alignment:
Q  305 ccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaacaaa 361  Q
    |||||||||||||||||||||    || |||||||  ||||||||||||||||||||    
T  11056396 ccacttataaacacatgttcagacaatcttttatcaaatgtgagactctttaacaaa 11056452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 275 - 358
Target Start/End: Complemental strand, 20253561 - 20253477
Alignment:
Q  275 caaaatcagcttgtgaggtgatgattttctccacttataaacacatgttcatg-tcatattttatctgatgtgagactctttaac 358  Q
    |||||||||| |||||||||||| || |  ||||||||||||||||  ||| | |||| | ||||| ||||||||||| ||||||    
T  20253561 caaaatcagcatgtgaggtgatggttgttgccacttataaacacattgtcaggatcatctcttatccgatgtgagactttttaac 20253477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 102 - 258
Target Start/End: Complemental strand, 32002550 - 32002397
Alignment:
Q  102 attttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacc 201  Q
    ||||||| | ||||| |||||||||||||| ||||| | |||||   ||||||||||| |||  |||||||| |||||| ||  | | ||||  ||||||    
T  32002550 attttgttcaatgtgggactctttaacacacctccttacgaccaatcctattgggcttagtt-atggacatagatggtgcgtgactcgatagcggaaacc 32002452  T
Q  202 tgatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaattg 258  Q
    ||||||||  || |||| || |||||||| |||| |||||| |||||||| ||||||    
T  32002451 tgatagcagatgaccaatag-atcttgga-gaggttctgataccatcttaaaaattg 32002397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 43262619 - 43262667
Alignment:
Q  312 taaacacatgttcatgtcatattttatctgatgtgagactctttaacaa 360  Q
    ||||||| |||||| ||||| | |||| |||||||||||||||||||||    
T  43262619 taaacacttgttcaggtcatctcttatttgatgtgagactctttaacaa 43262667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 283 - 359
Target Start/End: Original strand, 44118901 - 44118977
Alignment:
Q  283 gcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    ||||||||||||| ||||  | ||||||||||||||||  ||| | ||| | ||||| |||||| ||||||||||||    
T  44118901 gcttgtgaggtgaggattacccccacttataaacacattgtcaggccatctcttatccgatgtgggactctttaaca 44118977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 1e-27; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 105 - 256
Target Start/End: Complemental strand, 8084352 - 8084203
Alignment:
Q  105 ttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctga 204  Q
    |||| ||||||| ||||||| |||||| | ||||| |||||||||||||||||||||||| ||||||||||||||| ||   |||||||   ||||||||    
T  8084352 ttgttcgatgtgggactctt-aacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtgatccaatagcgaaaacctga 8084254  T
Q  205 tagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    ||||| |||||| || | |||||||| ||||||||||| |||||||||||||    
T  8084253 tagcatgtggcccaatggatcttgga-gaggctctgataccatcttagaaat 8084203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 106 - 256
Target Start/End: Original strand, 11232289 - 11232437
Alignment:
Q  106 tgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgat 205  Q
    ||||||||||| ||||||| |||||| | ||||| |||||||||||||||||||||||| ||||||||||||||| ||  | | ||||  ||||||||||    
T  11232289 tgtccgatgtgggactctt-aacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtgactcgatagcggaaacctgat 11232387  T
Q  206 agcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    | || |||||| || | |||||||| ||||||||||| |||||||||||||    
T  11232388 aacaggtggcccaatggatcttgga-gaggctctgataccatcttagaaat 11232437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 108 - 214
Target Start/End: Original strand, 3157106 - 3157211
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 207  Q
    ||||||||||||||||| |||||| | ||||| |||||||||||||||||||||||| ||||||||||||||| || |||| ||||  ||||||||||||    
T  3157106 tccgatgtgagactctt-aacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtgtcccgatagcggaaacctgatag 3157204  T
Q  208 caagtgg 214  Q
    || ||||    
T  3157205 caggtgg 3157211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 108 - 256
Target Start/End: Original strand, 39052791 - 39052937
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 207  Q
    ||||||||| ||||||| |||||| | ||||| ||||| |||||||||||||||||| ||||||||||||||| ||  ||  ||||  ||||||||||||    
T  39052791 tccgatgtgggactctt-aacacaccccctcacgaccaacactattgggcttggttcgtggacataaatggtgggtggccggatagcggaaacctgatag 39052889  T
Q  208 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    || | ||||||| | |||||||| |||||||| || |||||||||||||    
T  39052890 cagggggccaaatggatcttgga-gaggctctaataccatcttagaaat 39052937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 135 - 251
Target Start/End: Original strand, 18004217 - 18004332
Alignment:
Q  135 cctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggag 234  Q
    ||||| ||||||||||||| |||||||||| ||||||||||||||| ||  ||| ||||  |||||||||||||| |||||| || | |||||||| |||    
T  18004217 cctcacgaccagcactattaggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgatagcaggtggcccaatggatcttgga-gag 18004315  T
Q  235 gctctgatgccatctta 251  Q
    |||||||| ||||||||    
T  18004316 gctctgataccatctta 18004332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 124 - 256
Target Start/End: Complemental strand, 20301468 - 20301337
Alignment:
Q  124 ttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaa 223  Q
    |||||||| | ||||| |||||||||||||||||||||||| | ||||||||||||| ||   || ||||  |||||||||||||| |||||| || | |    
T  20301468 ttaacacaccccctcacgaccagcactattgggcttggttcgtagacataaatggtgggtggtccgatagcggaaacctgatagcaggtggcccaatgga 20301369  T
Q  224 tcttggaggaggctctgatgccatcttagaaat 256  Q
    |||| || ||||||||||| |||||||||||||    
T  20301368 tctt-gaagaggctctgataccatcttagaaat 20301337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 124 - 256
Target Start/End: Complemental strand, 21088100 - 21087969
Alignment:
Q  124 ttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaa 223  Q
    |||||||| | ||||| |||||||||||||||||||||||| | ||||||||||||| ||   || ||||  |||||||||||||| |||||| || | |    
T  21088100 ttaacacaccccctcacgaccagcactattgggcttggttcgtagacataaatggtgggtggtccgatagcggaaacctgatagcaggtggcccaatgga 21088001  T
Q  224 tcttggaggaggctctgatgccatcttagaaat 256  Q
    |||| || ||||||||||| |||||||||||||    
T  21088000 tctt-gaagaggctctgataccatcttagaaat 21087969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 124 - 256
Target Start/End: Complemental strand, 41790865 - 41790734
Alignment:
Q  124 ttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaa 223  Q
    |||||||| | ||||| |||||||||| ||||||||||||| ||||||||||||||| ||  | | ||||  |||||||||||||| |||||| || | |    
T  41790865 ttaacacaccccctcacgaccagcactcttgggcttggttcatggacataaatggtgggtggctcgatagcggaaacctgatagcaggtggcccaatgga 41790766  T
Q  224 tcttggaggaggctctgatgccatcttagaaat 256  Q
    |||| || ||||||||||| |||||||||||||    
T  41790765 tctt-gaagaggctctgataccatcttagaaat 41790734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 135 - 256
Target Start/End: Complemental strand, 12688268 - 12688148
Alignment:
Q  135 cctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggag 234  Q
    ||||| ||||| ||||||||||||| |||| ||||||||||||||| ||  |||||||| ||||||||||||||| |||||| || | ||||| || |||    
T  12688268 cctcatgaccatcactattgggcttagttcgtggacataaatggtgggtggcccaatagaagaaacctgatagcaggtggcccaatggatctt-gaagag 12688170  T
Q  235 gctctgatgccatcttagaaat 256  Q
    ||||| ||  ||||||||||||    
T  12688169 gctctaatatcatcttagaaat 12688148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 112 - 256
Target Start/End: Original strand, 3157425 - 3157567
Alignment:
Q  112 atgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaag 211  Q
    ||||||||||||| |||||| |  |||| |||||||||||||||||||||||| ||||||||||||||| || |||| ||||   ||||||||||||| |    
T  3157425 atgtgagactctt-aacacacccactcacgaccagcactattgggcttggttcgtggacataaatggtgggtgtcccgatagcgaaaacctgatagcagg 3157523  T
Q  212 tggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    ||| | || | || ||||| |||||||||||  ||||||| ||||    
T  3157524 tggtccaatggattttgga-gaggctctgatatcatcttataaat 3157567  T

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Target: chr8; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 275 - 359
Target Start/End: Original strand, 10614973 - 10615057
Alignment:
Q  275 caaaatcagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    ||||||| ||||||||||||| ||||  | ||| || |||||||||||||||||||||||||||| |||||| ||||||||||||    
T  10614973 caaaatcggcttgtgaggtgaagattacccccatttgtaaacacatgttcatgtcatattttatccgatgtgggactctttaaca 10615057  T

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Target: chr8; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 104 - 193
Target Start/End: Original strand, 37867925 - 37868014
Alignment:
Q  104 tttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaatag 193  Q
    |||||||||||| |||||||||||||||   ||||| ||||| ||||||||| |||||||| ||||||||||||||| ||  ||||||||    
T  37867925 tttgtccgatgttagactctttaacacacaccctcacgaccaacactattggccttggttcgtggacataaatggtgggtggcccaatag 37868014  T

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Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 283 - 359
Target Start/End: Original strand, 31079604 - 31079680
Alignment:
Q  283 gcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    ||||||||||||| ||||  ||||||||||||||||||||||| | ||||||||| | |||||| ||||||||||||    
T  31079604 gcttgtgaggtgaggattgcctccacttataaacacatgttcaagccatattttacccgatgtgggactctttaaca 31079680  T

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Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 109 - 177
Target Start/End: Original strand, 31079660 - 31079728
Alignment:
Q  109 ccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatg 177  Q
    |||||||| |||||||||||||| ||||||| ||||| | |||||||||||||||| ||||||||||||    
T  31079660 ccgatgtgggactctttaacacacctcctcacgaccatccctattgggcttggttcgtggacataaatg 31079728  T

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Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 144 - 256
Target Start/End: Complemental strand, 31197801 - 31197690
Alignment:
Q  144 cagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatg 243  Q
    ||||||||||| ||||||||| ||||||||||||||| ||   || ||||  |||||||||||||| |||||| || | |||| ||| |||||||||||     
T  31197801 cagcactattgagcttggttcgtggacataaatggtgggtggtccgatagcggaaacctgatagcaggtggcccaatggatctcgga-gaggctctgata 31197703  T
Q  244 ccatcttagaaat 256  Q
    |||||||||||||    
T  31197702 ccatcttagaaat 31197690  T

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Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 108 - 256
Target Start/End: Original strand, 37868445 - 37868591
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 207  Q
    ||||||||  |||||||||||||  | ||||| |||||||| ||||||||||||||| || |||||||||||| ||  ||||||||  ||||| ||||||    
T  37868445 tccgatgttcgactctttaacacccc-cctcacgaccagcaatattgggcttggttcgtgtacataaatggtgggtggcccaatagcggaaacttgatag 37868543  T
Q  208 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    |  |||||| || | |||||||| |||||| |||| |||||||| ||||    
T  37868544 cgggtggcccaatggatcttgga-gaggctatgataccatcttaaaaat 37868591  T

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Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 111 - 219
Target Start/End: Original strand, 39052637 - 39052744
Alignment:
Q  111 gatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaa 210  Q
    |||||| ||||||| |||||| | ||||| ||||| |||||||||||||||||| ||||||||||||||| ||  ||  ||||  ||||||||||||||     
T  39052637 gatgtgggactctt-aacacaccccctcacgaccaacactattgggcttggttcgtggacataaatggtgggtggccggatagcggaaacctgatagcag 39052735  T
Q  211 gtggccaaa 219  Q
    |||||||||    
T  39052736 gtggccaaa 39052744  T

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Target: chr8; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 276 - 359
Target Start/End: Original strand, 8466759 - 8466842
Alignment:
Q  276 aaaatcagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    |||| ||||||||||||||| |||| || ||||||||||||||  ||||||| ||| | ||||| |||||||||||||||||||    
T  8466759 aaaaccagcttgtgaggtgaggattgtccccacttataaacactcgttcatgccatctcttatccgatgtgagactctttaaca 8466842  T

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Target: chr8; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 199
Target Start/End: Original strand, 37868165 - 37868260
Alignment:
Q  104 tttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaa 199  Q
    |||||| ||||| |||||||||||||||   ||||| ||||| ||||||||||||||| || ||||||||||||||| ||  |||||||| |||||    
T  37868165 tttgtctgatgttagactctttaacacacaccctcacgaccaacactattgggcttggctcgtggacataaatggtgggtgacccaatagcagaaa 37868260  T

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Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 231
Target Start/End: Original strand, 35682876 - 35683000
Alignment:
Q  106 tgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgat 205  Q
    |||||||||||  |||||| |||||  | ||||| |||||||||||||| ||||||||| ||||||||||||||| ||  ||| ||||  ||||||| ||    
T  35682876 tgtccgatgtggaactctt-aacaccacccctcacgaccagcactattgagcttggttcgtggacataaatggtgggtggcccgatagcggaaacctaat 35682974  T
Q  206 agcaagtggccaaaagaatcttggag 231  Q
    |||| |||||| || | |||||||||    
T  35682975 agcaggtggcccaatggatcttggag 35683000  T

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Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 128 - 256
Target Start/End: Original strand, 5675937 - 5676064
Alignment:
Q  128 cacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatctt 227  Q
    |||| ||||||| |||||||| ||||||||||||||| | ||||||||||||| ||  |||||||    ||||||||||||| |||||| |  |||||||    
T  5675937 cacacctcctcacgaccagcagtattgggcttggttcgtagacataaatggtgggtgacccaatatcgaaaacctgatagcaggtggcctagtgaatctt 5676036  T
Q  228 ggaggaggctctgatgccatcttagaaat 256  Q
     || ||| |||||||  ||||||||||||    
T  5676037 -gaagagactctgatatcatcttagaaat 5676064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 29006074 - 29006007
Alignment:
Q  112 atgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtg 180  Q
    |||||||||||||||| ||| ||||||| ||||||||||||||||||| | || |||||||||||||||    
T  29006074 atgtgagactctttaataca-ctcctcacgaccagcactattgggcttcgctcatggacataaatggtg 29006007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 257
Target Start/End: Complemental strand, 10615623 - 10615469
Alignment:
Q  102 attttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacc 201  Q
    ||||||| ||||||  ||||||||||||||   ||||| ||| ||||||||||| |||||||| |||| |||||| ||  ||  ||| ||||  ||||||    
T  10615623 attttgttcgatgtaggactctttaacacacaccctcacgactagcactattggacttggttcgtggagataaatagttggtgacccgatagcggaaacc 10615524  T
Q  202 tgatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaatt 257  Q
    ||||| || ||||   || | |||||||| ||||||||||| ||||||||||||||    
T  10615523 tgatatcaggtggtacaatggatcttgga-gaggctctgataccatcttagaaatt 10615469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 135 - 214
Target Start/End: Complemental strand, 39960153 - 39960074
Alignment:
Q  135 cctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtgg 214  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||| ||  | | ||||  |||||||||||||| ||||    
T  39960153 cctcacgaccagcactattgggcttggttcgtggacataaatggtgggtagctcgatagcggaaacctgatagcaggtgg 39960074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 276 - 346
Target Start/End: Original strand, 12289204 - 12289274
Alignment:
Q  276 aaaatcagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtg 346  Q
    ||||| || ||||||||||||||||  |||||||||||||||||||||||| |||| |||| | |||||||    
T  12289204 aaaatgagtttgtgaggtgatgattacctccacttataaacacatgttcatatcatcttttgtttgatgtg 12289274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 110 - 180
Target Start/End: Original strand, 20094659 - 20094728
Alignment:
Q  110 cgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtg 180  Q
    ||||||| ||||||| |||||  | ||||| |||||||||||||||||||||||| |||||||||||||||    
T  20094659 cgatgtgggactctt-aacacgccccctcacgaccagcactattgggcttggttcgtggacataaatggtg 20094728  T

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Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 263 - 359
Target Start/End: Complemental strand, 7730004 - 7729907
Alignment:
Q  263 taactcatcctt-caaaatcagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    |||||||||||| ||||| | ||||||||||||| ||||  | ||||||||||||||||| ||| | ||| |  ||||||||||| ||||||||||||    
T  7730004 taactcatccttacaaaaccggcttgtgaggtgaggattgcccccacttataaacacatggtcaggccatctcatatctgatgtgggactctttaaca 7729907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 5675831 - 5675902
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtg 180  Q
    ||||||||  ||||||||| |||| ||||||  ||||||||||||||| |||||||| |||||||||||||||    
T  5675831 tccgatgtaggactcttta-cacacctcctctcgaccagcactattggacttggttcgtggacataaatggtg 5675902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 178
Target Start/End: Complemental strand, 8849411 - 8849335
Alignment:
Q  102 attttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatgg 178  Q
    |||||||| ||| ||||||||||||||||| | ||||| ||||| |||||||||| ||||||| | || ||||||||    
T  8849411 attttgtctgatttgagactctttaacacaccccctcacgaccaacactattgggtttggttcatagatataaatgg 8849335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 38476168 - 38476112
Alignment:
Q  202 tgatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaattg 258  Q
    |||||| |||||||| || | |||||||||||||||||||| |||||||||||||||    
T  38476168 tgatagtaagtggcccaatggatcttggaggaggctctgataccatcttagaaattg 38476112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 141 - 180
Target Start/End: Original strand, 15797137 - 15797176
Alignment:
Q  141 gaccagcactattgggcttggttcttggacataaatggtg 180  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  15797137 gaccagcactattgggcttggttcgtggacataaatggtg 15797176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 306 - 359
Target Start/End: Complemental strand, 10615649 - 10615596
Alignment:
Q  306 cacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    ||||||||||||||||||||||||||||||| |  |||||  ||||||||||||    
T  10615649 cacttataaacacatgttcatgtcatattttgttcgatgtaggactctttaaca 10615596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 156 - 256
Target Start/End: Original strand, 15042793 - 15042894
Alignment:
Q  156 gcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggag-gaggctctgatgccatcttagaa 254  Q
    ||||||||| |||||||||| |||| ||  ||  ||||  |||||||||||||| |||||| || ||||||||||| |||||| ||||  ||||||||||    
T  15042793 gcttggttcgtggacataaacggtgggtggcctgatagcggaaacctgatagcaggtggcccaatgaatcttggagagaggctatgataacatcttagaa 15042892  T
Q  255 at 256  Q
    ||    
T  15042893 at 15042894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 197 - 258
Target Start/End: Original strand, 26208198 - 26208259
Alignment:
Q  197 aaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaattg 258  Q
    ||||||||||||| |||||| || | ||||| ||| |||||||||| |||||||||||||||    
T  26208198 aaacctgatagcaggtggcccaacggatcttagagaaggctctgataccatcttagaaattg 26208259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 359
Target Start/End: Complemental strand, 8715672 - 8715617
Alignment:
Q  304 tccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    ||||||||||||||||||||||||| || |||||| | ||||| ||||||| ||||    
T  8715672 tccacttataaacacatgttcatgttatcttttatttaatgtgggactcttcaaca 8715617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 135 - 177
Target Start/End: Complemental strand, 8715841 - 8715799
Alignment:
Q  135 cctcaggaccagcactattgggcttggttcttggacataaatg 177  Q
    ||||| |||||||||||||||| ||||||| ||||||||||||    
T  8715841 cctcatgaccagcactattgggtttggttcctggacataaatg 8715799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 305 - 359
Target Start/End: Complemental strand, 8716371 - 8716317
Alignment:
Q  305 ccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    |||||||||||| |||||||||||||| |||| ||||| ||| | ||||||||||    
T  8716371 ccacttataaactcatgttcatgtcatcttttgtctgaagtgtgtctctttaaca 8716317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 320
Target Start/End: Original strand, 5675768 - 5675813
Alignment:
Q  275 caaaatcagcttgtgaggtgatgattttctccacttataaacacat 320  Q
    |||||||||||||||||||||  ||| |||| ||||||||||||||    
T  5675768 caaaatcagcttgtgaggtgagaattgtctctacttataaacacat 5675813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 6462981 - 6462924
Alignment:
Q  303 ctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaacaa 360  Q
    ||||||||||||||||||  ||| ||||| | ||||| ||||||| ||||||||||||    
T  6462981 ctccacttataaacacattgtcaagtcatctcttatccgatgtgaaactctttaacaa 6462924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 320
Target Start/End: Original strand, 29099774 - 29099819
Alignment:
Q  275 caaaatcagcttgtgaggtgatgattttctccacttataaacacat 320  Q
    ||||||||| ||||||||||| ||||  ||||||||||||||||||    
T  29099774 caaaatcagtttgtgaggtgaagattgcctccacttataaacacat 29099819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 135 - 215
Target Start/End: Complemental strand, 7669614 - 7669535
Alignment:
Q  135 cctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggc 215  Q
    ||||| |||||||||||| | ||||||||| ||||||||||||||| ||   || ||||  |||||||||||||| |||||    
T  7669614 cctcacgaccagcactat-gagcttggttcgtggacataaatggtgggtggtccgatagtggaaacctgatagcaggtggc 7669535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 283 - 331
Target Start/End: Original strand, 16962123 - 16962171
Alignment:
Q  283 gcttgtgaggtgatgattttctccacttataaacacatgttcatgtcat 331  Q
    ||||||||| ||||||||  |  ||||||||||||||||||||||||||    
T  16962123 gcttgtgagatgatgattaccctcacttataaacacatgttcatgtcat 16962171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 196 - 256
Target Start/End: Original strand, 24532370 - 24532429
Alignment:
Q  196 gaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    |||||||||||||| |||||| || | |||||| ||| ||||||||| |||||||||||||    
T  24532370 gaaacctgatagcaggtggcccaatggatcttgaagg-ggctctgataccatcttagaaat 24532429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 307 - 335
Target Start/End: Original strand, 33816811 - 33816839
Alignment:
Q  307 acttataaacacatgttcatgtcatattt 335  Q
    |||||||||||||||||||||||||||||    
T  33816811 acttataaacacatgttcatgtcatattt 33816839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 275 - 359
Target Start/End: Original strand, 37868617 - 37868701
Alignment:
Q  275 caaaatcagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    ||||| ||||||||||||||| ||||  | ||| | ||||||||||||||| | |||  ||| || |||||| ||||||||||||    
T  37868617 caaaaccagcttgtgaggtgaggattgcccccattaataaacacatgttcaggccatcatttgtccgatgtgggactctttaaca 37868701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 40014699 - 40014647
Alignment:
Q  284 cttgtgaggtgatgattttctccacttataaacacatgttcatgtcatatttt 336  Q
    ||||||| |||| ||||  | ||||||||||||||||||||||||||| ||||    
T  40014699 cttgtgaagtgaagattgcccccacttataaacacatgttcatgtcatttttt 40014647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 106 - 256
Target Start/End: Complemental strand, 2140 - 1992
Alignment:
Q  106 tgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgat 205  Q
    ||||||||||| ||||||| |||||| | ||||| |||||||||||||||||||||||| ||||||||||||||| ||  | | ||||  ||||||||||    
T  2140 tgtccgatgtgggactctt-aacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtgactcgatagcggaaacctgat 2042  T
Q  206 agcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    | || |||||| || | |||||||| ||||||||||| |||||||||||||    
T  2041 aacaggtggcccaatggatcttgga-gaggctctgataccatcttagaaat 1992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 7e-26; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 106 - 258
Target Start/End: Complemental strand, 1596817 - 1596667
Alignment:
Q  106 tgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgat 205  Q
    ||||||||||| ||||||| ||||||    |||| |||||||||||||||||||||||| ||||||||||||||| ||  ||| ||||  ||||||||||    
T  1596817 tgtccgatgtgggactctt-aacacacactctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgat 1596719  T
Q  206 agcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaattg 258  Q
    | || |||||| || | |||||||| ||||||||||| |||||||||||||||    
T  1596718 aacatgtggcccaatggatcttgga-gaggctctgataccatcttagaaattg 1596667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 141 - 256
Target Start/End: Complemental strand, 25620326 - 25620212
Alignment:
Q  141 gaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggaggctctg 240  Q
    ||||| |||||||||||||||||| ||||||||||||||| ||  ||||||||  |||||||||||||| |||||| || | |||||||| |||||||||    
T  25620326 gaccaacactattgggcttggttcgtggacataaatggtgggtggcccaatagcggaaacctgatagcaggtggcccaatggatcttgga-gaggctctg 25620228  T
Q  241 atgccatcttagaaat 256  Q
    || |||||||||||||    
T  25620227 ataccatcttagaaat 25620212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 106 - 256
Target Start/End: Complemental strand, 21861518 - 21861370
Alignment:
Q  106 tgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgat 205  Q
    |||||||||||  |||||| |||||| | ||||| ||||||||||||| |||||||||| ||||||||||||||| ||  ||| ||||  ||||||||||    
T  21861518 tgtccgatgtggaactctt-aacacaccccctcacgaccagcactattaggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgat 21861420  T
Q  206 agcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    | || |||||| || | |||||||| ||||||||||| |||||||||||||    
T  21861419 aacaggtggcccaatggatcttgga-gaggctctgataccatcttagaaat 21861370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 106 - 256
Target Start/End: Original strand, 36277086 - 36277234
Alignment:
Q  106 tgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgat 205  Q
    |||| |||||||||||||| |||||| | ||||| |||||||||||||||||||||||| ||||||||||||||| ||   || ||||  ||||||||||    
T  36277086 tgtctgatgtgagactctt-aacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggtccgatagcggaaacctgat 36277184  T
Q  206 agcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    || | |||||| || | |||||||| |||||||||||  ||||||||||||    
T  36277185 agtaggtggcccaatggatcttgga-gaggctctgataacatcttagaaat 36277234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 108 - 256
Target Start/End: Complemental strand, 33834413 - 33834267
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 207  Q
    ||||||||| ||||||| ||| || | | ||| ||||| |||||||||||||||||| ||||||||||||||| ||  ||| |||||  |||||||||||    
T  33834413 tccgatgtgggactctt-aacccaccccttcacgaccaacactattgggcttggttcgtggacataaatggtgggtggcccgatagggaaaacctgatag 33834315  T
Q  208 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    || |||||| || | |||||||| ||||||||||| |||||||||||||    
T  33834314 caggtggcccaatggatcttgga-gaggctctgataccatcttagaaat 33834267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 106 - 256
Target Start/End: Complemental strand, 29469829 - 29469681
Alignment:
Q  106 tgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgat 205  Q
    ||||||||||| ||||||| |||||| | ||||| |||||||||||||||||||| ||| ||||||||||||||| ||  ||| ||||  ||| ||||||    
T  29469829 tgtccgatgtgggactctt-aacacaccccctcacgaccagcactattgggcttgattcgtggacataaatggtgggtggcccgatagcggaagcctgat 29469731  T
Q  206 agcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    | || |||||| || | |||||||| ||||||||||| |||| ||||||||    
T  29469730 aacaggtggcccaatggatcttgga-gaggctctgataccatattagaaat 29469681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 108 - 258
Target Start/End: Complemental strand, 22574823 - 22574675
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 207  Q
    ||||||||||||||||| |||||| | ||||| ||||| |||||||||||||||||| | ||||||||||||| ||   || ||||  ||||||||||||    
T  22574823 tccgatgtgagactctt-aacacaccacctcacgaccaacactattgggcttggttcgtagacataaatggtgggtggtccgatagctgaaacctgatag 22574725  T
Q  208 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaattg 258  Q
    || |||||| || | |||||||| ||| |||| || ||||| |||||||||    
T  22574724 caggtggcccaatggatcttgga-gagactcttataccatcatagaaattg 22574675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 108 - 209
Target Start/End: Original strand, 3519822 - 3519922
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 207  Q
    ||||||||| ||||||| |||||| | ||||| |||||||| ||||||||||||||| ||||||||||||||| ||  ||| ||||  ||||||||||||    
T  3519822 tccgatgtgggactctt-aacacaccccctcacgaccagcattattgggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgatag 3519920  T
Q  208 ca 209  Q
    ||    
T  3519921 ca 3519922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 135 - 256
Target Start/End: Original strand, 3519927 - 3520047
Alignment:
Q  135 cctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggag 234  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||| || |||| ||||   ||||| ||||||| |||||| || | ||| |||| |||    
T  3519927 cctcacgaccagcactattgggcttggttcgtggacataaatggtgggtgtcccgatagcgaaaaccagatagcaggtggcccaatggatcatgga-gag 3520025  T
Q  235 gctctgatgccatcttagaaat 256  Q
    |||||||| ||| || ||||||    
T  3520026 gctctgataccaactaagaaat 3520047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 135 - 256
Target Start/End: Complemental strand, 4886525 - 4886405
Alignment:
Q  135 cctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggag 234  Q
    ||||| |||||| ||||||||||||||||| ||||||||||||||| ||  | | |||| |||||| |||||||| |||||| || | |||||||| |||    
T  4886525 cctcacgaccagtactattgggcttggttcgtggacataaatggtgggtggctcgatagtagaaacttgatagcaggtggcccaatggatcttgga-gag 4886427  T
Q  235 gctctgatgccatcttagaaat 256  Q
     | ||||| |||||||||||||    
T  4886426 accctgataccatcttagaaat 4886405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 108 - 253
Target Start/End: Complemental strand, 31892374 - 31892231
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 207  Q
    ||||||||||||||||| |||||| | ||||| ||||| || ||||||||||||||| ||||||||||||||| ||  ||  |||   ||||||||||||    
T  31892374 tccgatgtgagactctt-aacacaccccctcacgaccatcattattgggcttggttcgtggacataaatggtgggtggcctgataacggaaacctgatag 31892276  T
Q  208 caagtggccaaaagaatcttggaggaggctctgatgccatcttaga 253  Q
    || |||||| ||    ||||||| ||||||||||| ||||||||||    
T  31892275 caggtggcccaataggtcttgga-gaggctctgattccatcttaga 31892231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 109 - 257
Target Start/End: Original strand, 30727216 - 30727364
Alignment:
Q  109 ccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagc 208  Q
    ||||||||  ||||||||||||| | ||||| | ||| ||||||||||||| |||  |||| |||||||||| ||  ||||||||  ||||||||||||     
T  30727216 ccgatgtgtcactctttaacacaccccctcacgcccaacactattgggcttagtttgtggatataaatggtgggtggcccaatagcggaaacctgataga 30727315  T
Q  209 aagtggccaaaagaatcttggaggaggctctgatgccatcttagaaatt 257  Q
    | |||||| ||  |||||||||  || ||||||| |||||||| |||||    
T  30727316 aggtggcccaacaaatcttggattagactctgataccatcttaaaaatt 30727364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 276 - 351
Target Start/End: Original strand, 40898957 - 40899032
Alignment:
Q  276 aaaatcagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagact 351  Q
    |||| ||||||||||||||||||||  | |||||||||||||||||||||  ||||||||||| ||||| ||||||    
T  40898957 aaaaccagcttgtgaggtgatgattgcccccacttataaacacatgttcagatcatattttatttgatgcgagact 40899032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 196 - 258
Target Start/End: Original strand, 26239864 - 26239926
Alignment:
Q  196 gaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaattg 258  Q
    |||||||||||||| |||||| || | |||||||||||||||||||| |||||||||||||||    
T  26239864 gaaacctgatagcaggtggcccaacggatcttggaggaggctctgataccatcttagaaattg 26239926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 40746130 - 40746200
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtg 180  Q
    ||||||||| ||||||| |||||| | ||||| |||||||||||||||||||||||| |||||||||||||||    
T  40746130 tccgatgtgggactctt-aacacacc-cctcacgaccagcactattgggcttggttcgtggacataaatggtg 40746200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 109 - 256
Target Start/End: Original strand, 2404272 - 2404416
Alignment:
Q  109 ccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagc 208  Q
    |||||||| ||||||| |||||| ||| ||| |||||||||||||| ||||||||| |||||||||| |||  ||   |||||||  |||||||||||||    
T  2404272 ccgatgtgggactctt-aacacacctc-tcacgaccagcactattgcgcttggttcgtggacataaacggtaggtggtccaatagcggaaacctgatagc 2404369  T
Q  209 aagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    | ||| || || | || || || ||||||||||| |||||||||||||    
T  2404370 aggtgacccaatggat-ttcgaagaggctctgataccatcttagaaat 2404416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 305 - 343
Target Start/End: Original strand, 10420916 - 10420954
Alignment:
Q  305 ccacttataaacacatgttcatgtcatattttatctgat 343  Q
    |||||||||||||||||||||||||||||||||||||||    
T  10420916 ccacttataaacacatgttcatgtcatattttatctgat 10420954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 306 - 355
Target Start/End: Complemental strand, 19065143 - 19065094
Alignment:
Q  306 cacttataaacacatgttcatgtcatattttatctgatgtgagactcttt 355  Q
    |||||||||| ||||| ||| |||||||||||||||||||||||||||||    
T  19065143 cacttataaatacatggtcaagtcatattttatctgatgtgagactcttt 19065094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 1936212 - 1936280
Alignment:
Q  111 gatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggt 179  Q
    |||||| |||||||||||||| ||| ||| ||||| ||||||||||| |||||| | ||||||||||||    
T  1936212 gatgtgtgactctttaacacacctcttcatgaccaacactattgggcatggttcgttgacataaatggt 1936280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 357
Target Start/End: Original strand, 10420714 - 10420766
Alignment:
Q  305 ccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaa 357  Q
    |||||||||||||||||||||||||||||||| |  ||||| |||||||||||    
T  10420714 ccacttataaacacatgttcatgtcatatttttttcgatgtaagactctttaa 10420766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 359
Target Start/End: Original strand, 21213075 - 21213159
Alignment:
Q  275 caaaatcagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    ||||| || |||||||||||||||||    |||||||||||||||||||||||  || |||||||||||| | || |||||||||    
T  21213075 caaaaccaacttgtgaggtgatgattactcccacttataaacacatgttcatgcaatcttttatctgatgcgggattctttaaca 21213159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 147 - 256
Target Start/End: Original strand, 33996214 - 33996319
Alignment:
Q  147 cactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgcca 246  Q
    |||||||||||||||||| ||||||||||||||| ||  ||| || |  |||||||||||||| |||||| || | |   |||| ||||||||||| |||    
T  33996214 cactattgggcttggttcgtggacataaatggtgggtggcccgattgcggaaacctgatagcaggtggcccaatgga---tgga-gaggctctgatacca 33996309  T
Q  247 tcttagaaat 256  Q
    ||||||||||    
T  33996310 tcttagaaat 33996319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 2938009 - 2937947
Alignment:
Q  283 gcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgt 345  Q
    |||||||||||||  ||| ||||||| |||||||||||||||| ||| ||||||||| |||||    
T  2938009 gcttgtgaggtgaatattgtctccacatataaacacatgttcaagtcgtattttatccgatgt 2937947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 180
Target Start/End: Original strand, 18826352 - 18826421
Alignment:
Q  110 cgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtg 180  Q
    ||||||||||||||| |||||| | ||||| ||||| ||| |||||||||||||| ||| |||||||||||    
T  18826352 cgatgtgagactctt-aacacatcccctcatgaccaacacaattgggcttggttcgtggtcataaatggtg 18826421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 180
Target Start/End: Original strand, 22339459 - 22339536
Alignment:
Q  103 ttttgtccgatgtgagactctttaacacagctcc-tcaggaccagcactattgggcttggttcttggacataaatggtg 180  Q
    ||||||||||||||| ||||||||||||| |||| ||| || || ||||||||||||| |||| ||||||| |||||||    
T  22339459 ttttgtccgatgtgaaactctttaacaca-ctccttcacgatcaacactattgggctttgttcgtggacattaatggtg 22339536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 285 - 359
Target Start/End: Complemental strand, 47849611 - 47849537
Alignment:
Q  285 ttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    ||||||||||| ||||  | | ||||||||||||||||||||| ||| ||||||| ||||||  |||||||||||    
T  47849611 ttgtgaggtgaggattgccccaacttataaacacatgttcatgccatcttttatccgatgtggcactctttaaca 47849537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 2315149 - 2315194
Alignment:
Q  135 cctcaggaccagcactattgggcttggttcttggacataaatggtg 180  Q
    ||||| ||||| |||||||||||||||||| |||||||||||||||    
T  2315149 cctcacgaccaacactattgggcttggttcgtggacataaatggtg 2315194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 278 - 359
Target Start/End: Original strand, 8125443 - 8125524
Alignment:
Q  278 aatcagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    |||| |||||||| || | ||||||  ||| |||||||||||| |||||| ||| |||||||||||||  ||||||||||||    
T  8125443 aatcggcttgtgatgtcaggatttttcccatttataaacacatattcatgccatcttttatctgatgttggactctttaaca 8125524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 135 - 256
Target Start/End: Original strand, 36993196 - 36993316
Alignment:
Q  135 cctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggag 234  Q
    ||||| ||||||||||||||  |||| ||| || |||||||| ||| ||   |||||||  |||| ||||||||| |||||| || | ||||| || |||    
T  36993196 cctcacgaccagcactattgaacttgattcgtgaacataaatagtgggtggtccaatagcggaaatctgatagcacgtggcccaatggatctt-gaagag 36993294  T
Q  235 gctctgatgccatcttagaaat 256  Q
    |||||||| |||||||||||||    
T  36993295 gctctgataccatcttagaaat 36993316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 142 - 215
Target Start/End: Original strand, 48661450 - 48661523
Alignment:
Q  142 accagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggc 215  Q
    |||| |||||||||||||||||| ||||||||||||||| ||  ||| | ||  |||||||||||||| |||||    
T  48661450 accaacactattgggcttggttcgtggacataaatggtgggtggcccgaaagcggaaacctgatagcaggtggc 48661523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 311 - 359
Target Start/End: Complemental strand, 2600657 - 2600609
Alignment:
Q  311 ataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    ||||||||||||||||| |||||||| || |||||||||| ||||||||    
T  2600657 ataaacacatgttcatgccatattttctccgatgtgagacactttaaca 2600609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 283 - 359
Target Start/End: Original strand, 23794398 - 23794474
Alignment:
Q  283 gcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    ||||||||||||| ||||  | ||| ||||||||| ||||||||| ||| |||| | ||||||| ||||||||||||    
T  23794398 gcttgtgaggtgaggattgccaccatttataaacaaatgttcatgacatcttttgtttgatgtgtgactctttaaca 23794474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 359
Target Start/End: Complemental strand, 24612838 - 24612763
Alignment:
Q  284 cttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    |||||||||||| |||  ||  ||||||||||||||| |||||   || ||||||| |||||||||||||||||||    
T  24612838 cttgtgaggtgaagatagtcctcacttataaacacatattcatacaatcttttatccgatgtgagactctttaaca 24612763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 354
Target Start/End: Complemental strand, 31892429 - 31892358
Alignment:
Q  283 gcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctt 354  Q
    ||||||||||||| |||| || ||||||||||| ||||  ||||||||| ||  ||| ||||||||||||||    
T  31892429 gcttgtgaggtgaagattgtccccacttataaatacattgtcatgtcatgttccatccgatgtgagactctt 31892358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 180
Target Start/End: Original strand, 35308275 - 35308314
Alignment:
Q  141 gaccagcactattgggcttggttcttggacataaatggtg 180  Q
    |||||||||||||||||||||||| |||||||||| ||||    
T  35308275 gaccagcactattgggcttggttcgtggacataaacggtg 35308314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 354
Target Start/End: Original strand, 40898749 - 40898828
Alignment:
Q  275 caaaatcagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctt 354  Q
    ||||||| | |||| |||||| ||||  | |||||||||||||||| || ||||||| |||||| |||||| ||||||||    
T  40898749 caaaatcggtttgtaaggtgaggattgcccccacttataaacacatatttatgtcatcttttatttgatgtaagactctt 40898828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 148 - 258
Target Start/End: Complemental strand, 17948418 - 17948308
Alignment:
Q  148 actattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgccat 247  Q
    ||||||||||||||||  |||||| |||||||| ||   |  ||||  |||| ||||||  ||||| || ||  |||||||||| |||||||||| ||||    
T  17948418 actattgggcttggtttgtggacacaaatggtgggtggtctgatagcggaaatctgataataagtgacccaacaaatcttggagtaggctctgataccat 17948319  T
Q  248 cttagaaattg 258  Q
    |||||||||||    
T  17948318 cttagaaattg 17948308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 320
Target Start/End: Complemental strand, 3393032 - 3392987
Alignment:
Q  275 caaaatcagcttgtgaggtgatgattttctccacttataaacacat 320  Q
    ||||||| |||||||||||||  |||||| ||||||||||||||||    
T  3393032 caaaatcggcttgtgaggtgagaattttccccacttataaacacat 3392987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 354
Target Start/End: Complemental strand, 4507221 - 4507136
Alignment:
Q  269 atccttcaaaatcagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctt 354  Q
    ||||| ||||| |||||||||| |||| |||| || ||||||||||||| ||   || | ||| || |||||||||||||||||||    
T  4507221 atcctacaaaaccagcttgtgaagtgaagattgtccccacttataaacatattagcaggccatcttgtatctgatgtgagactctt 4507136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 359
Target Start/End: Complemental strand, 11473379 - 11473326
Alignment:
Q  306 cacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    |||||||||||| |||||||||| ||||||||| | || |||| ||||||||||    
T  11473379 cacttataaacatatgttcatgtaatattttatttaatatgagtctctttaaca 11473326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 14540864 - 14540905
Alignment:
Q  135 cctcaggaccagcactattgggcttggttcttggacataaat 176  Q
    ||||| |||||||||||||||||||||||  |||||||||||    
T  14540864 cctcatgaccagcactattgggcttggtttgtggacataaat 14540905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 354
Target Start/End: Original strand, 35308190 - 35308259
Alignment:
Q  285 ttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctt 354  Q
    ||||||||||||||||  | ||||||||||||||||  ||||| ||| |  |||||||||||||| ||||    
T  35308190 ttgtgaggtgatgattgcccccacttataaacacattgtcatgacatctcctatctgatgtgagattctt 35308259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 359
Target Start/End: Complemental strand, 47849808 - 47849758
Alignment:
Q  307 acttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    ||||||||||||  ||||||||||| ||||||| |||||| ||||||||||||    
T  47849808 acttataaacac--gttcatgtcatcttttatccgatgtgggactctttaaca 47849758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 319 - 359
Target Start/End: Original strand, 1936046 - 1936086
Alignment:
Q  319 atgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    |||||||||| ||||||||||||| |||||| |||||||||    
T  1936046 atgttcatgttatattttatctgaagtgagattctttaaca 1936086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 2376299 - 2376327
Alignment:
Q  329 catattttatctgatgtgagactctttaa 357  Q
    |||||||||||||||||||||||||||||    
T  2376299 catattttatctgatgtgagactctttaa 2376327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 196 - 256
Target Start/End: Original strand, 10882188 - 10882247
Alignment:
Q  196 gaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    ||||||||||| || |||||| |||||||| || || |||||||||| |||||||||||||    
T  10882188 gaaacctgataacaggtggcccaaagaatcgtgaag-aggctctgataccatcttagaaat 10882247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 306 - 362
Target Start/End: Original strand, 24043019 - 24043075
Alignment:
Q  306 cacttataaacacatgttcatgtcatattttatctgatgtgagactctttaacaaat 362  Q
    |||||||||| ||||  ||| ||||| | |||||||| |||||||||||||||||||    
T  24043019 cacttataaatacattgtcaggtcatttcttatctgacgtgagactctttaacaaat 24043075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 305 - 360
Target Start/End: Complemental strand, 32292539 - 32292483
Alignment:
Q  305 ccacttataaacacatgttcatgtcatatt-ttatctgatgtgagactctttaacaa 360  Q
    |||||||||||||| |||||| | |||| | ||||| ||||||||||||||||||||    
T  32292539 ccacttataaacacttgttcaggccatactcttatccgatgtgagactctttaacaa 32292483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 3e-25; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 141 - 256
Target Start/End: Original strand, 39348246 - 39348361
Alignment:
Q  141 gaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggaggctctg 240  Q
    |||||||||||||||||||||||| ||||||||||||||| ||   || ||||  |||||||||||||| |||||| || | | ||||||||||||||||    
T  39348246 gaccagcactattgggcttggttcgtggacataaatggtgggtggtccgatagtggaaacctgatagcaggtggcccaatggaccttggaggaggctctg 39348345  T
Q  241 atgccatcttagaaat 256  Q
    || |||||||||||||    
T  39348346 ataccatcttagaaat 39348361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 106 - 320
Target Start/End: Original strand, 4112635 - 4112850
Alignment:
Q  106 tgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgat 205  Q
    ||||||||||| ||||||| |||||  | ||||| ||||| |||||||||||||||||| | ||||||||||||| ||    | ||||  ||||||||||    
T  4112635 tgtccgatgtgggactctt-aacaccccccctcacgaccaacactattgggcttggttcgttgacataaatggtgggtggttcgatagcggaaacctgat 4112733  T
Q  206 agcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaattg--agcataactcatccttcaaaatcagcttgtgaggtgatgattt-t 302  Q
    |||| |||| | || | ||||||||| |||||||||| |||||||||||||||   || |||||||||||| |||| | | ||||||||||| |||||      
T  4112734 agcaggtggtccaatggatcttggag-aggctctgataccatcttagaaattggaggcctaactcatccttaaaaaccggtttgtgaggtgaggatttcc 4112832  T
Q  303 ctccacttataaacacat 320  Q
    | ||||||||||||||||    
T  4112833 ccccacttataaacacat 4112850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 124 - 325
Target Start/End: Complemental strand, 369839 - 369635
Alignment:
Q  124 ttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagt-ttcccaataggagaaacctgatagcaagtggccaaaaga 222  Q
    |||||||| | ||||| |||||||||||||||||||||||| ||||||||||||||| ||   ||| ||||  ||||||||||||||  ||  | || |     
T  369839 ttaacacatcccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtgaccccgatagcggaaacctgatagcagctgatccaatgg 369740  T
Q  223 atcttggaggaggctctgatgccatcttagaaattga-gcataactcatcctt-caaaatcagcttgtgaggtgatgattttctccacttataaacacat 320  Q
    ||||| ||| |||||||||| ||||| |||||||||| |  |||||||||||| ||||| || ||||| |||||| ||||  | ||||||||||||||||    
T  369739 atcttagagtaggctctgataccatcctagaaattgaggtctaactcatccttacaaaaccatcttgtaaggtgaggattgcccccacttataaacacat 369640  T
Q  321 gttca 325  Q
     ||||    
T  369639 tttca 369635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 135 - 256
Target Start/End: Original strand, 2859515 - 2859635
Alignment:
Q  135 cctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggag 234  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||| ||  ||| |||| |||||||| |||| | |||||| || | ||||| || |||    
T  2859515 cctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggcccgatagcagaaacctaatagaaggtggcccaatggatctt-gaagag 2859613  T
Q  235 gctctgatgccatcttagaaat 256  Q
    ||||| || |||||||||||||    
T  2859614 gctctaataccatcttagaaat 2859635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 108 - 256
Target Start/End: Original strand, 4112868 - 4113014
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 207  Q
    ||||||||| ||||||| |||||| | ||||| |||||||||||||| ||||||||| ||||||||||||||| ||   |||||||  ||||||||||||    
T  4112868 tccgatgtgggactctt-aacacaccccctcacgaccagcactattgagcttggttcgtggacataaatggtgggtggtccaatagcggaaacctgatag 4112966  T
Q  208 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
       |||||  || | |||||||| ||||||| ||| |||||||||||||    
T  4112967 atggtggctcaatggatcttgga-gaggctccgataccatcttagaaat 4113014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 108 - 256
Target Start/End: Complemental strand, 35772251 - 35772105
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 207  Q
    ||||||||| ||||||| |||||| |  ||||  ||| ||||||||||||||||||| ||||||||||||||| ||  ||| ||||  ||||||||||||    
T  35772251 tccgatgtgggactctt-aacacacccgctcacaaccggcactattgggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgatag 35772153  T
Q  208 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    ||  ||||| || | ||||| ||| |||||||||| |||||||||||||    
T  35772152 cagatggcccaatggatctt-gagaaggctctgataccatcttagaaat 35772105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 108 - 242
Target Start/End: Complemental strand, 25713380 - 25713248
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 207  Q
    ||||||||| ||||||| |||||  | ||||| ||||| |||||||||||||||||| ||||||||||||||| ||  ||| ||||  ||||| ||||||    
T  25713380 tccgatgtgggactctt-aacaccccccctcacgaccaacactattgggcttggttcgtggacataaatggtgggtggcccgatagcggaaacttgatag 25713282  T
Q  208 caagtggccaaaagaatcttggaggaggctctgat 242  Q
    || |||||| || | |||||||| |||||||||||    
T  25713281 caggtggcccaatggatcttgga-gaggctctgat 25713248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 106 - 256
Target Start/End: Complemental strand, 26177132 - 26176984
Alignment:
Q  106 tgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgat 205  Q
    ||||||||||| ||||||| |||||| | | ||| ||||||||||||||| |||||||| |||| |||||||||| ||   || ||||  |||| |||||    
T  26177132 tgtccgatgtgggactctt-aacacaccccgtcacgaccagcactattggacttggttcgtggatataaatggtgggtggtccgatagcggaaatctgat 26177034  T
Q  206 agcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    |||| |||||| || | |||||||| |||||||||||  ||||||||||||    
T  26177033 agcaggtggcccaatggatcttgga-gaggctctgatatcatcttagaaat 26176984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 108 - 258
Target Start/End: Complemental strand, 38668347 - 38668199
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 207  Q
    ||||||||| ||||||| |||||| |  |||| |||||||| ||||||||||||||| |||||||||||| |  ||  ||| |||| ||||||||||||     
T  38668347 tccgatgtgggactctt-aacacacccactcacgaccagcaatattgggcttggttcatggacataaatgataggtgacccgatagcagaaacctgataa 38668249  T
Q  208 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaattg 258  Q
    || ||| || || | ||| |||| ||||||||||| |||||||||||||||    
T  38668248 caggtgacccaatggatcatgga-gaggctctgataccatcttagaaattg 38668199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 12325383 - 12325464
Alignment:
Q  98 tcagattttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggt 179  Q
    |||| ||||||  |||||||||||||||||||||   ||||| ||||| |||||||||||||||||| ||||||||||||||    
T  12325383 tcagcttttgtttgatgtgagactctttaacacacaccctcacgaccaacactattgggcttggttcgtggacataaatggt 12325464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 12376537 - 12376605
Alignment:
Q  111 gatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggt 179  Q
    |||||||||||||||||||||   ||||| ||||| |||||||||||||||||| ||||||||||||||    
T  12376537 gatgtgagactctttaacacacaccctcacgaccaacactattgggcttggttcgtggacataaatggt 12376605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 284 - 359
Target Start/End: Original strand, 12376480 - 12376555
Alignment:
Q  284 cttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    ||||||| |||| ||||  | ||||||||||||||||||||||||||| |||| | ||||||||||||||||||||    
T  12376480 cttgtgaagtgaagattgcccccacttataaacacatgttcatgtcatcttttgtttgatgtgagactctttaaca 12376555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 283 - 357
Target Start/End: Complemental strand, 49142995 - 49142921
Alignment:
Q  283 gcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaa 357  Q
    ||||||||| ||| ||||  | ||||||||||||||||||||||| |||||||| ||||||||| ||||||||||    
T  49142995 gcttgtgagctgaggattgcccccacttataaacacatgttcatgccatattttgtctgatgtgggactctttaa 49142921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 256
Target Start/End: Complemental strand, 35892275 - 35892132
Alignment:
Q  111 gatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaa 210  Q
    |||||| ||||||| |||||| |  |||| ||||||||| |||||||||  ||| ||||||||||||||| ||  ||| |||| |||||  |||||||||    
T  35892275 gatgtgggactctt-aacacaccctctcacgaccagcacaattgggcttaattcgtggacataaatggtgggtgccccgatagcagaaatatgatagcaa 35892177  T
Q  211 gtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    |||||| || ||||||| || ||| ||||||| || ||||||||||    
T  35892176 gtggcccaatgaatctt-gaagagactctgataccttcttagaaat 35892132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 275 - 359
Target Start/End: Complemental strand, 52907434 - 52907350
Alignment:
Q  275 caaaatcagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    ||||| ||||||||||||||| ||||  | |||||||||||||||||||||   ||||||||||| |||||| |||| |||||||    
T  52907434 caaaaccagcttgtgaggtgaggattgcccccacttataaacacatgttcaaaccatattttatccgatgtgggactatttaaca 52907350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 107 - 209
Target Start/End: Complemental strand, 7307944 - 7307843
Alignment:
Q  107 gtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgata 206  Q
    |||||||||||||||||| || ||| | ||||| ||||| |||||||||  ||||||| ||||||||||||||| ||   |||||||  |||||||||||    
T  7307944 gtccgatgtgagactctt-aatacaccccctcacgaccaacactattggatttggttcgtggacataaatggtgggtggtccaatagcggaaacctgata 7307846  T
Q  207 gca 209  Q
    |||    
T  7307845 gca 7307843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 135 - 256
Target Start/End: Original strand, 4098291 - 4098411
Alignment:
Q  135 cctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggag 234  Q
    ||||| ||||| || ||||||||||||||| |||||||||| |||| ||  ||| |||| ||||||||||| ||| |||||| || | ||||| || |||    
T  4098291 cctcacgaccaacattattgggcttggttcgtggacataaagggtgggtggcccgatagcagaaacctgattgcaggtggcccaatggatctt-gaagag 4098389  T
Q  235 gctctgatgccatcttagaaat 256  Q
     ||||||| ||| |||||||||    
T  4098390 tctctgataccaacttagaaat 4098411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 108 - 256
Target Start/End: Original strand, 25145582 - 25145728
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 207  Q
    ||||||||||||||||| |||||| | ||||| |||||||||||||| ||||| ||| ||||||| ||||||| ||   || |||   ||||||||||||    
T  25145582 tccgatgtgagactctt-aacacaccccctcacgaccagcactattgagcttgattcgtggacattaatggtgggtggtccgataacggaaacctgatag 25145680  T
Q  208 caagt-ggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    || || || ||| || |||||||| |||||||||||  ||||||||||||    
T  25145681 caggtgggtcaatag-atcttgga-gaggctctgatatcatcttagaaat 25145728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 147 - 256
Target Start/End: Complemental strand, 33156918 - 33156809
Alignment:
Q  147 cactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgcca 246  Q
    |||||||||||||| ||| |||||||||||||||  |  ||| ||||  |||||||||||||| |||  | || | ||||||||| ||||||| || |||    
T  33156918 cactattgggcttgattcgtggacataaatggtggatggcccgatagcggaaacctgatagcaggtgaaccaacggatcttggagtaggctctaatacca 33156819  T
Q  247 tcttagaaat 256  Q
    ||||||||||    
T  33156818 tcttagaaat 33156809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 8870786 - 8870857
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtg 180  Q
    ||||||||| ||||||| |||||| | ||||| ||||||||| |||||| ||||||| |||||||||||||||    
T  8870786 tccgatgtgggactctt-aacacaccccctcacgaccagcacaattgggtttggttcgtggacataaatggtg 8870857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 284 - 359
Target Start/End: Original strand, 12325339 - 12325414
Alignment:
Q  284 cttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    ||||||| |||| ||||  | ||||||||||||||||||| ||||||  |||| | ||||||||||||||||||||    
T  12325339 cttgtgaagtgaagattgcccccacttataaacacatgtttatgtcagcttttgtttgatgtgagactctttaaca 12325414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 108 - 256
Target Start/End: Complemental strand, 38733369 - 38733227
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 207  Q
    ||||||||| ||||||| |||||| ||| ||| ||||||||||||||||||| |||| | || |||||||||| ||      ||||  ||||||||||||    
T  38733369 tccgatgtgggactctt-aacacacctcttcacgaccagcactattgggcttagttcgtagatataaatggtgggt----ggatagcggaaacctgatag 38733275  T
Q  208 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    || |||| | || | |||||||| ||| ||||||| |||||||||||||    
T  38733274 caggtggtccaatggatcttgga-gagactctgataccatcttagaaat 38733227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 258
Target Start/End: Complemental strand, 16163154 - 16163007
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 207  Q
    ||||||||| ||||||| ||||||   ||||| |||||||||||| |||||||| || ||||||||||||||  ||  ||| ||||  ||||||||||||    
T  16163154 tccgatgtgggactctt-aacacacaccctcacgaccagcactat-gggcttggctcgtggacataaatggtaggtggcccgatagcggaaacctgatag 16163057  T
Q  208 caagtggccaaaagaatcttggaggaggctctgatgccatcttagaaattg 258  Q
    || |||||| |  | |||||||| |||||| ||||  ||||||| ||||||    
T  16163056 caggtggcccattggatcttgga-gaggctttgatatcatcttaaaaattg 16163007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 256
Target Start/End: Complemental strand, 27413567 - 27413423
Alignment:
Q  110 cgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagca 209  Q
    ||||||| |||| ||||||||| |  |||| ||||| |||||||||||||| ||| ||||||||||||||| ||  ||| ||||  |||| |||||| ||    
T  27413567 cgatgtgggact-tttaacacaccctctcacgaccaacactattgggcttgattcgtggacataaatggtgggtggcccgatagcggaaatctgataaca 27413469  T
Q  210 agtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
     |||| | ||   |||||||| |||||||||||  ||||||||||||    
T  27413468 ggtggtctaatagatcttgga-gaggctctgatatcatcttagaaat 27413423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 285 - 362
Target Start/End: Original strand, 49316189 - 49316266
Alignment:
Q  285 ttgtgaggtgatgattttctccacttataaacacatgttcatgtcata-ttttatctgatgtgagactctttaacaaat 362  Q
    ||||||| ||| |||| || ||||||||||||||||||||||| |||| |||| ||| ||||| |||||||||||||||    
T  49316189 ttgtgagatgaagattgtccccacttataaacacatgttcatgccatatttttttctaatgtg-gactctttaacaaat 49316266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 178
Target Start/End: Original strand, 51460179 - 51460248
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatgg 178  Q
    ||||||||| ||||||| |||||| | ||||| | ||||||| |||||||||||||||||| |||||||||    
T  51460179 tccgatgtgggactctt-aacacaccccctcacggccagcacaattgggcttggttcttgggcataaatgg 51460248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 9146646 - 9146718
Alignment:
Q  103 ttttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaat 176  Q
    |||||||||||||| ||||| | |||||| | ||||| ||| |||||||||| ||||||||| |||||||||||    
T  9146646 ttttgtccgatgtgggactcgtgaacacacc-cctcacgactagcactattgagcttggttcgtggacataaat 9146718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 159 - 256
Target Start/End: Complemental strand, 30370007 - 30369911
Alignment:
Q  159 tggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    |||||| ||||||||||||||| ||  ||| ||||  |||||||||||||| ||| || || | |||||||| ||||||||||| | |||||||||||    
T  30370007 tggttcgtggacataaatggtgggtggcccgatagtggaaacctgatagcaggtgacccaatggatcttgga-gaggctctgatacaatcttagaaat 30369911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 42351902 - 42351955
Alignment:
Q  283 gcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatatttt 336  Q
    ||||||||||||| |||   ||||||||||||||||||||||||| ||||||||    
T  42351902 gcttgtgaggtgaggatggcctccacttataaacacatgttcatgccatatttt 42351955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 49868527 - 49868450
Alignment:
Q  283 gcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaacaa 360  Q
    |||||| | ||||| ||| |||||||||||| |||||| |||||||||| ||||||  ||||  ||||||||||||||    
T  49868527 gcttgtaatgtgattattgtctccacttatatacacatattcatgtcattttttattcgatgcaagactctttaacaa 49868450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 136 - 257
Target Start/End: Original strand, 51460331 - 51460451
Alignment:
Q  136 ctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggagg 235  Q
    |||| ||| ||||| |||| | ||||||| |||||| |||||||| ||  ||| ||||  |||||||||||||| |||||| || | |||||||| ||||    
T  51460331 ctcacgactagcacaattgagtttggttcgtggacacaaatggtgggtcgcccgatagcggaaacctgatagcaggtggcccaatggatcttgga-gagg 51460429  T
Q  236 ctctgatgccatcttagaaatt 257  Q
    |||||||  ||| |||||||||    
T  51460430 ctctgatatcattttagaaatt 51460451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 196 - 260
Target Start/End: Original strand, 5953685 - 5953749
Alignment:
Q  196 gaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaattgag 260  Q
    ||||||||| |||| |||||| || | |||||||| ||||||||||| |||||||| ||||||||    
T  5953685 gaaacctgaaagcaggtggcctaacggatcttggatgaggctctgataccatcttaaaaattgag 5953749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 288 - 360
Target Start/End: Complemental strand, 26229605 - 26229533
Alignment:
Q  288 tgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaacaa 360  Q
    |||||||| ||||  || |||||||||||||||||||| | |||||||| ||||||||| |||| | ||||||    
T  26229605 tgaggtgaggattgccttcacttataaacacatgttcaagccatattttgtctgatgtgggactatgtaacaa 26229533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 214
Target Start/End: Original strand, 34264586 - 34264688
Alignment:
Q  111 gatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaa 210  Q
    ||||||||| |||| |||||| | ||||| |||||||||||||| ||||||||| | || ||||||||||  |  ||| ||||  ||||||||||||||     
T  34264586 gatgtgagattctt-aacacaccccctcacgaccagcactattgtgcttggttcgtcgatataaatggtggttgacccgatagcggaaacctgatagcat 34264684  T
Q  211 gtgg 214  Q
    ||||    
T  34264685 gtgg 34264688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 251
Target Start/End: Complemental strand, 52961554 - 52961428
Alignment:
Q  124 ttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaa 223  Q
    |||||||| | ||||| ||| |||||||||| ||||| ||| || |||||| ||||| ||  ||| ||||  |||||||||||||| |||||| || | |    
T  52961554 ttaacacaccccctcacgactagcactattgagcttgtttcgtgtacataactggtgggtggcccgatagcggaaacctgatagcaggtggcccaatgga 52961455  T
Q  224 tcttggaggaggctctgatgccatctta 251  Q
    |||| || ||||||||||| ||| ||||    
T  52961454 tctt-gaagaggctctgataccaactta 52961428  T

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Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 275 - 325
Target Start/End: Original strand, 31004471 - 31004521
Alignment:
Q  275 caaaatcagcttgtgaggtgatgattttctccacttataaacacatgttca 325  Q
    ||||| ||||||||||||||| ||||  | |||||||||||||||||||||    
T  31004471 caaaaccagcttgtgaggtgaggattgcccccacttataaacacatgttca 31004521  T

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Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 51459817 - 51459871
Alignment:
Q  124 ttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatgg 178  Q
    |||||||| | ||||| ||||||||| |||||||||||||| | |||||||||||    
T  51459817 ttaacacaccccctcacgaccagcacaattgggcttggttcgtagacataaatgg 51459871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 10991815 - 10991868
Alignment:
Q  283 gcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatatttt 336  Q
    ||||||||||||| ||||  || |||||||||||||||||||||| || |||||    
T  10991815 gcttgtgaggtgaggattgccttcacttataaacacatgttcatgccacatttt 10991868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 209
Target Start/End: Complemental strand, 17208773 - 17208676
Alignment:
Q  112 atgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagca 209  Q
    |||||||| ||||| ||||| | ||||| | ||| ||||||||||||||||   |||| |||||||||| ||  ||| ||||  ||||||||||||||    
T  17208773 atgtgagattctttcacacaccccctcacgcccaacactattgggcttggtgggtggatataaatggtgggtggcccgatagcggaaacctgatagca 17208676  T

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Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 343
Target Start/End: Complemental strand, 19622512 - 19622475
Alignment:
Q  306 cacttataaacacatgttcatgtcatattttatctgat 343  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  19622512 cacttataaacacatgttcatatcatcttttatctgat 19622475  T

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Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 320
Target Start/End: Original strand, 26347010 - 26347047
Alignment:
Q  283 gcttgtgaggtgatgattttctccacttataaacacat 320  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  26347010 gcttgtgaggtgaggattgtctccacttataaacacat 26347047  T

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Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 325
Target Start/End: Original strand, 31181548 - 31181597
Alignment:
Q  276 aaaatcagcttgtgaggtgatgattttctccacttataaacacatgttca 325  Q
    |||| ||||||||||||||| ||||  | |||||||||||||||||||||    
T  31181548 aaaaccagcttgtgaggtgaggattgcccccacttataaacacatgttca 31181597  T

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Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 306 - 346
Target Start/End: Complemental strand, 29898931 - 29898891
Alignment:
Q  306 cacttataaacacatgttcatgtcatattttatctgatgtg 346  Q
    ||||||||||||| |||||| ||||| ||||||||||||||    
T  29898931 cacttataaacacgtgttcaggtcatcttttatctgatgtg 29898891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 307 - 351
Target Start/End: Original strand, 31739429 - 31739473
Alignment:
Q  307 acttataaacacatgttcatgtcatattttatctgatgtgagact 351  Q
    |||||||||||||| |||||||||||  | |||||||||||||||    
T  31739429 acttataaacacattttcatgtcataactcatctgatgtgagact 31739473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 126 - 256
Target Start/End: Original strand, 5633 - 5762
Alignment:
Q  126 aacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatc 225  Q
    |||||| | ||||| |||||||||||||||||||||||| ||||||||||||||| ||   || ||||  |||||||||||||| |||||  || | |||    
T  5633 aacacaccccctcacgaccagcactattgggcttggttcgtggacataaatggtgggtggtccgatagcggaaacctgatagcaggtggctcaatggatc 5732  T
Q  226 ttggaggaggctctgatgccatcttagaaat 256  Q
    ||||| ||||||||||| |||||||||||||    
T  5733 ttgga-gaggctctgataccatcttagaaat 5762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 276 - 351
Target Start/End: Complemental strand, 67327 - 67252
Alignment:
Q  276 aaaatcagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagact 351  Q
    |||| ||||||||||||||||||||  | |||||||||||||||||||||  ||||||||||| ||||| ||||||    
T  67327 aaaaccagcttgtgaggtgatgattgcccccacttataaacacatgttcagatcatattttatttgatgcgagact 67252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 354
Target Start/End: Complemental strand, 67535 - 67456
Alignment:
Q  275 caaaatcagcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctt 354  Q
    ||||||| | |||| |||||| ||||  | |||||||||||||||| || ||||||| |||||| |||||| ||||||||    
T  67535 caaaatcggtttgtaaggtgaggattgcccccacttataaacacatatttatgtcatcttttatttgatgtaagactctt 67456  T

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Target: scaffold0048 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 106 - 180
Target Start/End: Complemental strand, 82065 - 81992
Alignment:
Q  106 tgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtg 180  Q
    |||| |||||| ||||||| |||||| | ||||| |||||||||||||||||||||||| |||||||||||||||    
T  82065 tgtctgatgtgggactctt-aacacaccccctcacgaccagcactattgggcttggttcatggacataaatggtg 81992  T

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Target: scaffold0045 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 306 - 359
Target Start/End: Original strand, 41270 - 41323
Alignment:
Q  306 cacttataaacacatgttcatgtcatattttatctgatgtgagactctttaaca 359  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||    
T  41270 cacttataaacacatgttcatgtcatcttttgtctgatgtgaggctctttaaca 41323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 197 - 256
Target Start/End: Original strand, 41156 - 41214
Alignment:
Q  197 aaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaat 256  Q
    |||| |||||||| |||||| || ||||||||||| |||||||||| |||||||||||||    
T  41156 aaacttgatagcaggtggcccaatgaatcttggag-aggctctgataccatcttagaaat 41214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 13305 - 13197
Alignment:
Q  124 ttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaatagg-agaaacctgatagcaagtggccaaaaga 222  Q
    |||||||| | | ||| ||||| |||||||||||||||||| ||||||||||| ||| ||  |||||||||  |||||||||||||| |||| | || |     
T  13305 ttaacacaccccatcacgaccaacactattgggcttggttcatggacataaatagtgggtgacccaataggcggaaacctgatagcaggtggtccaatgg 13206  T
Q  223 atcttggag 231  Q
    |||||||||    
T  13205 atcttggag 13197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 10946 - 10838
Alignment:
Q  124 ttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaatagg-agaaacctgatagcaagtggccaaaaga 222  Q
    |||||||| | | ||| ||||| |||||||||||||||||| ||||||||||| ||| ||  |||||||||  |||||||||||||| |||| | || |     
T  10946 ttaacacaccccatcacgaccaacactattgggcttggttcatggacataaatagtgggtgacccaataggcggaaacctgatagcaggtggtccaatgg 10847  T
Q  223 atcttggag 231  Q
    |||||||||    
T  10846 atcttggag 10838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 14612 - 14504
Alignment:
Q  124 ttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaatagg-agaaacctgatagcaagtggccaaaaga 222  Q
    |||||||| | | ||| ||||| |||||||||||||||||| ||||||||||| ||| ||  ||| |||||  |||||||||||||| |||| | || |     
T  14612 ttaacacaccccatcacgaccaacactattgggcttggttcatggacataaatagtgggtgacccgataggcggaaacctgatagcaggtggtccaatgg 14513  T
Q  223 atcttggag 231  Q
    |||||||||    
T  14512 atcttggag 14504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 320
Target Start/End: Complemental strand, 14484 - 14308
Alignment:
Q  150 tattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaagaatcttggaggaggctctgatgccatct 249  Q
    ||||||||||| ||| ||||||||||||||  ||  ||| ||||  ||||||||||| ||  ||||| || | |||||||| ||||||||||| ||||||    
T  14484 tattgggcttgattcgtggacataaatggtaggtggcccgatagcggaaacctgataacatatggcccaatggatcttgga-gaggctctgataccatct 14386  T
Q  250 tagaaa------ttgagcataactc-atccttcaaaatcagcttgtgaggtgatgattttctccacttataaacacat 320  Q
    ||||||      ||| || |||| | | ||  ||||| | |||||||||||||||||| || ||||||||||||||||    
T  14385 tagaaaacgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattgtccccacttataaacacat 14308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 250
Target Start/End: Complemental strand, 51481 - 51355
Alignment:
Q  123 tttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatagcaagtggccaaaaga 222  Q
    ||||||||| | |||||  |||| |||||||||||||||||| || ||||||||| |  ||  ||| |||| ||||||||||||||| | | || || |     
T  51481 tttaacacatcccctcacaaccaacactattgggcttggttcgtgaacataaatgataggtggcccgatagtagaaacctgatagcaggagacccaatgg 51382  T
Q  223 atcttggaggaggctctgatgccatctt 250  Q
    |||||||| || |||||||| |||||||    
T  51381 atcttgga-gaagctctgataccatctt 51355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 257
Target Start/End: Original strand, 87665 - 87819
Alignment:
Q  102 attttgtccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacc 201  Q
    |||||||||| ||||||||||||||||||| ||  | | |||||||||||||| || || |   |||| |||||||||| ||  ||| ||||  ||||||    
T  87665 attttgtccgctgtgagactctttaacacatct-tttacgaccagcactattgagcatgatgtgtggatataaatggtgggtgacccgatagtggaaacc 87763  T
Q  202 tgatagcaagtggccaaaagaatcttggaggaggctctgatgccatcttagaaatt 257  Q
    |||||||| |||||| || |||| || ||| || || ||||  ||||||| |||||    
T  87764 tgatagcaggtggcccaatgaattttagagaagactttgatatcatcttaaaaatt 87819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 283 - 357
Target Start/End: Original strand, 102184 - 102258
Alignment:
Q  283 gcttgtgaggtgatgattttctccacttataaacacatgttcatgtcatattttatctgatgtgagactctttaa 357  Q
    ||||||||||||  ||||  | ||||||||||||||||||| | || ||||||| |||| ||||| |||||||||    
T  102184 gcttgtgaggtggcgattgcccccacttataaacacatgtttaggtaatattttgtctgctgtgaaactctttaa 102258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0729 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 214
Target Start/End: Complemental strand, 2716 - 2611
Alignment:
Q  108 tccgatgtgagactctttaacacagctcctcaggaccagcactattgggcttggttcttggacataaatggtgagtttcccaataggagaaacctgatag 207  Q
    ||||||||| ||||||| |||||| | ||||| || |||||||||| || ||||||| | ||||||||||| | ||  ||| ||||  ||||||||||||    
T  2716 tccgatgtgggactctt-aacacaccccctcacgatcagcactattaggtttggttcgtagacataaatggggggtggcccgatagcggaaacctgatag 2618  T
Q  208 caagtgg 214  Q
    || ||||    
T  2617 catgtgg 2611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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