View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0760_low_1 (Length: 742)

Name: NF0760_low_1
Description: NF0760
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0760_low_1
NF0760_low_1
[»] chr3 (47 HSPs)
chr3 (141-403)||(17936907-17937169)
chr3 (128-355)||(11987440-11987667)
chr3 (141-357)||(14283970-14284187)
chr3 (128-355)||(38166710-38166936)
chr3 (128-297)||(11480411-11480580)
chr3 (485-655)||(11480411-11480580)
chr3 (485-656)||(11987497-11987667)
chr3 (498-716)||(17936907-17937124)
chr3 (129-355)||(12903132-12903355)
chr3 (498-715)||(14283970-14284187)
chr3 (485-665)||(38166710-38166889)
chr3 (617-735)||(9303933-9304051)
chr3 (486-713)||(12903132-12903355)
chr3 (530-611)||(9304100-9304181)
chr3 (486-615)||(18738472-18738601)
chr3 (173-254)||(9304100-9304181)
chr3 (129-258)||(18738472-18738601)
chr3 (246-355)||(11480311-11480418)
chr3 (542-615)||(51962590-51962663)
chr3 (502-599)||(54040053-54040151)
chr3 (502-599)||(54049340-54049438)
chr3 (486-547)||(9304049-9304110)
chr3 (129-190)||(9304049-9304110)
chr3 (185-258)||(51962590-51962663)
chr3 (316-403)||(54039770-54039857)
chr3 (312-390)||(18892840-18892918)
chr3 (541-612)||(11516909-11516979)
chr3 (316-403)||(51962390-51962477)
chr3 (145-242)||(54040053-54040151)
chr3 (145-242)||(54049340-54049438)
chr3 (312-377)||(23174560-23174625)
chr3 (316-376)||(18889617-18889677)
chr3 (312-355)||(9303670-9303713)
chr3 (542-589)||(31413713-31413760)
chr3 (546-589)||(31413802-31413845)
chr3 (259-358)||(9303952-9304051)
chr3 (603-655)||(11480367-11480418)
chr3 (542-585)||(10903074-10903117)
chr3 (546-589)||(11637141-11637184)
chr3 (542-615)||(54039948-54040022)
chr3 (542-615)||(54049235-54049309)
chr3 (694-735)||(51962416-51962457)
chr3 (546-589)||(8603327-8603370)
chr3 (185-224)||(10903074-10903113)
chr3 (312-403)||(18738690-18738780)
chr3 (694-736)||(23174584-23174626)
chr3 (694-735)||(18738713-18738754)
[»] scaffold0207 (2 HSPs)
scaffold0207 (141-357)||(16611-16827)
scaffold0207 (498-656)||(16611-16768)
[»] scaffold0118 (2 HSPs)
scaffold0118 (128-355)||(35521-35748)
scaffold0118 (485-713)||(35521-35748)
[»] chr7 (27 HSPs)
chr7 (128-355)||(13319959-13320187)
chr7 (128-355)||(3048391-3048617)
chr7 (485-667)||(3048391-3048572)
chr7 (485-654)||(13319959-13320128)
chr7 (129-292)||(47482272-47482433)
chr7 (129-344)||(48623663-48623875)
chr7 (486-650)||(47482272-47482433)
chr7 (486-685)||(48623680-48623875)
chr7 (503-599)||(7285936-7286032)
chr7 (502-599)||(14252809-14252907)
chr7 (146-242)||(7285936-7286032)
chr7 (312-403)||(47482125-47482216)
chr7 (145-242)||(14252809-14252907)
chr7 (312-403)||(7285652-7285743)
chr7 (312-403)||(15761382-15761473)
chr7 (546-589)||(39293233-39293276)
chr7 (542-589)||(44306674-44306721)
chr7 (546-589)||(44306763-44306806)
chr7 (542-580)||(12246624-12246662)
chr7 (543-589)||(39293144-39293190)
chr7 (312-357)||(14252568-14252613)
chr7 (546-589)||(14276482-14276526)
chr7 (550-589)||(3136128-3136167)
chr7 (546-589)||(28389072-28389115)
chr7 (549-589)||(18081110-18081151)
chr7 (185-223)||(12246624-12246662)
chr7 (694-735)||(15761408-15761449)
[»] chr4 (54 HSPs)
chr4 (141-357)||(14502868-14503084)
chr4 (128-355)||(32461807-32462034)
chr4 (128-355)||(9793988-9794229)
chr4 (156-353)||(23271432-23271628)
chr4 (485-667)||(32461853-32462034)
chr4 (498-656)||(14502927-14503084)
chr4 (513-735)||(23271409-23271628)
chr4 (485-613)||(9793988-9794116)
chr4 (631-735)||(19019154-19019258)
chr4 (150-250)||(8043708-8043808)
chr4 (507-607)||(8043708-8043808)
chr4 (245-355)||(19698737-19698845)
chr4 (245-355)||(19709322-19709430)
chr4 (498-615)||(22737247-22737364)
chr4 (503-599)||(55378242-55378338)
chr4 (259-324)||(8043861-8043926)
chr4 (542-655)||(19698936-19699048)
chr4 (542-655)||(19709521-19709633)
chr4 (502-599)||(19699079-19699177)
chr4 (502-599)||(19709664-19709762)
chr4 (542-607)||(14570043-14570109)
chr4 (141-258)||(22737247-22737364)
chr4 (129-190)||(8043802-8043863)
chr4 (486-547)||(8043802-8043863)
chr4 (245-297)||(19698892-19698944)
chr4 (245-297)||(19709477-19709529)
chr4 (146-242)||(55378242-55378338)
chr4 (312-403)||(55377920-55378011)
chr4 (185-250)||(14570043-14570109)
chr4 (541-616)||(19082413-19082490)
chr4 (185-297)||(19698936-19699048)
chr4 (185-297)||(19709521-19709633)
chr4 (546-589)||(7966094-7966137)
chr4 (546-585)||(12346693-12346732)
chr4 (546-589)||(13448534-13448577)
chr4 (546-589)||(40902210-40902253)
chr4 (546-589)||(41918276-41918319)
chr4 (145-242)||(19699079-19699177)
chr4 (145-242)||(19709664-19709762)
chr4 (542-612)||(19623495-19623566)
chr4 (602-655)||(19698793-19698845)
chr4 (602-655)||(19698892-19698944)
chr4 (602-655)||(19709378-19709430)
chr4 (602-655)||(19709477-19709529)
chr4 (312-356)||(8043974-8044018)
chr4 (546-585)||(12336020-12336059)
chr4 (542-589)||(41918187-41918234)
chr4 (312-390)||(14910986-14911064)
chr4 (617-656)||(8043861-8043900)
chr4 (312-358)||(8373496-8373542)
chr4 (312-358)||(19019455-19019501)
chr4 (184-260)||(19082412-19082490)
chr4 (546-587)||(7848995-7849036)
chr4 (694-735)||(55377946-55377987)
[»] scaffold0342 (2 HSPs)
scaffold0342 (128-355)||(1946-2171)
scaffold0342 (485-727)||(1932-2171)
[»] chr6 (37 HSPs)
chr6 (128-355)||(29664878-29665105)
chr6 (128-355)||(32277893-32278119)
chr6 (485-685)||(32277921-32278119)
chr6 (485-667)||(29664878-29665060)
chr6 (185-355)||(19628056-19628224)
chr6 (245-403)||(16301225-16301385)
chr6 (542-615)||(27739744-27739817)
chr6 (489-655)||(16301421-16301583)
chr6 (185-258)||(27739744-27739817)
chr6 (502-602)||(35010780-35010881)
chr6 (132-297)||(16301421-16301583)
chr6 (542-611)||(14151202-14151272)
chr6 (542-655)||(19628056-19628168)
chr6 (145-245)||(35010780-35010881)
chr6 (312-390)||(14627249-14627327)
chr6 (312-390)||(27739899-27739977)
chr6 (312-390)||(35010513-35010591)
chr6 (245-298)||(16301376-16301429)
chr6 (312-391)||(222009-222088)
chr6 (185-254)||(14151202-14151272)
chr6 (502-599)||(19627927-19628025)
chr6 (615-735)||(16301251-16301372)
chr6 (546-589)||(940649-940692)
chr6 (312-403)||(1554902-1554993)
chr6 (542-589)||(17084665-17084712)
chr6 (546-589)||(17084843-17084886)
chr6 (602-656)||(16301376-16301429)
chr6 (677-735)||(14627262-14627321)
chr6 (546-589)||(19671116-19671159)
chr6 (546-589)||(22594984-22595027)
chr6 (542-615)||(35010678-35010752)
chr6 (694-735)||(27739923-27739964)
chr6 (525-589)||(31469033-31469097)
chr6 (542-589)||(22594895-22594942)
chr6 (145-242)||(19627927-19628025)
chr6 (694-735)||(1554926-1554967)
chr6 (694-735)||(35010526-35010567)
[»] scaffold0012 (4 HSPs)
scaffold0012 (498-735)||(35085-35322)
scaffold0012 (141-358)||(35104-35322)
scaffold0012 (312-390)||(223290-223368)
scaffold0012 (694-736)||(223302-223344)
[»] chr8 (43 HSPs)
chr8 (128-355)||(21495581-21495809)
chr8 (128-297)||(16040966-16041135)
chr8 (128-297)||(16042642-16042811)
chr8 (128-297)||(22885125-22885294)
chr8 (485-667)||(21495628-21495809)
chr8 (485-655)||(16040966-16041135)
chr8 (485-655)||(16042642-16042811)
chr8 (485-655)||(22885125-22885294)
chr8 (245-355)||(18611189-18611297)
chr8 (283-355)||(16040850-16040922)
chr8 (283-355)||(16042526-16042598)
chr8 (246-354)||(22885331-22885438)
chr8 (502-599)||(41508567-41508665)
chr8 (542-655)||(18610986-18611098)
chr8 (542-655)||(18617780-18617892)
chr8 (502-599)||(18610857-18610955)
chr8 (312-389)||(41508259-41508336)
chr8 (185-355)||(18617780-18617962)
chr8 (145-242)||(41508567-41508665)
chr8 (245-297)||(18611090-18611142)
chr8 (542-599)||(18617691-18617749)
chr8 (185-297)||(18610986-18611098)
chr8 (546-589)||(17500655-17500698)
chr8 (542-589)||(20177435-20177482)
chr8 (546-589)||(20177524-20177567)
chr8 (542-589)||(20222162-20222209)
chr8 (546-589)||(20222251-20222294)
chr8 (145-242)||(18610857-18610955)
chr8 (602-655)||(18611090-18611142)
chr8 (602-655)||(18611189-18611241)
chr8 (246-295)||(22885287-22885336)
chr8 (546-589)||(16000793-16000837)
chr8 (546-589)||(18262908-18262951)
chr8 (312-358)||(18618205-18618251)
chr8 (542-615)||(41508462-41508536)
chr8 (546-588)||(45468760-45468802)
chr8 (602-655)||(16040922-16040974)
chr8 (602-655)||(16042598-16042650)
chr8 (694-735)||(41508271-41508312)
chr8 (546-589)||(20708425-20708469)
chr8 (185-242)||(18617691-18617749)
chr8 (603-653)||(22885287-22885336)
chr8 (615-652)||(22885342-22885379)
[»] scaffold0023 (2 HSPs)
scaffold0023 (485-671)||(57844-58029)
scaffold0023 (128-298)||(57859-58029)
[»] scaffold0066 (6 HSPs)
scaffold0066 (128-297)||(44727-44896)
scaffold0066 (128-297)||(52923-53092)
scaffold0066 (485-655)||(44727-44896)
scaffold0066 (485-655)||(52923-53092)
scaffold0066 (245-298)||(53084-53137)
scaffold0066 (602-656)||(53084-53137)
[»] scaffold0032 (2 HSPs)
scaffold0032 (128-355)||(14705-14946)
scaffold0032 (485-613)||(14818-14946)
[»] chr2 (34 HSPs)
chr2 (181-355)||(25266505-25266679)
chr2 (140-355)||(28032372-28032586)
chr2 (128-355)||(23779185-23779424)
chr2 (129-355)||(17203229-17203453)
chr2 (497-656)||(28032428-28032586)
chr2 (485-611)||(23779298-23779424)
chr2 (486-713)||(17203229-17203453)
chr2 (538-654)||(25266564-25266679)
chr2 (242-354)||(22255294-22255406)
chr2 (185-363)||(22255130-22255309)
chr2 (255-355)||(7513256-7513355)
chr2 (503-599)||(32464580-32464675)
chr2 (486-599)||(22254985-22255099)
chr2 (146-242)||(32464580-32464675)
chr2 (502-599)||(7513522-7513620)
chr2 (542-599)||(42179877-42179935)
chr2 (542-656)||(22255130-22255244)
chr2 (129-242)||(22254985-22255099)
chr2 (542-655)||(7513379-7513491)
chr2 (546-589)||(16294238-16294281)
chr2 (546-589)||(22331303-22331346)
chr2 (145-242)||(7513522-7513620)
chr2 (185-242)||(42179877-42179935)
chr2 (542-589)||(22331477-22331524)
chr2 (542-585)||(25593792-25593835)
chr2 (185-297)||(7513379-7513491)
chr2 (599-656)||(22255294-22255350)
chr2 (312-357)||(42179632-42179677)
chr2 (312-356)||(32464832-32464876)
chr2 (542-589)||(22331388-22331435)
chr2 (185-224)||(25593792-25593831)
chr2 (615-713)||(7513256-7513353)
chr2 (547-599)||(28773364-28773413)
chr2 (542-615)||(42179772-42179846)
[»] scaffold0173 (2 HSPs)
scaffold0173 (156-355)||(4149-4346)
scaffold0173 (513-655)||(4149-4290)
[»] scaffold0001 (3 HSPs)
scaffold0001 (129-363)||(165717-165950)
scaffold0001 (486-655)||(165782-165950)
scaffold0001 (242-363)||(165612-165732)
[»] chr5 (32 HSPs)
chr5 (128-296)||(32949770-32949939)
chr5 (129-355)||(7527801-7528025)
chr5 (485-654)||(32949770-32949939)
chr5 (486-655)||(17908361-17908528)
chr5 (129-297)||(17908361-17908528)
chr5 (486-713)||(7527801-7528025)
chr5 (486-599)||(23985763-23985876)
chr5 (502-615)||(2030516-2030629)
chr5 (245-355)||(17908520-17908629)
chr5 (502-615)||(25003564-25003677)
chr5 (129-267)||(23985739-23985876)
chr5 (145-258)||(2030516-2030629)
chr5 (502-599)||(34938048-34938146)
chr5 (145-258)||(25003564-25003677)
chr5 (312-390)||(34938338-34938416)
chr5 (312-403)||(2030728-2030819)
chr5 (312-390)||(29191383-29191461)
chr5 (312-403)||(25003764-25003855)
chr5 (145-242)||(34938048-34938146)
chr5 (546-589)||(14343351-14343394)
chr5 (546-589)||(18225565-18225608)
chr5 (546-589)||(16836869-16836913)
chr5 (677-735)||(29191396-29191455)
chr5 (693-735)||(23985592-23985634)
chr5 (542-615)||(34938177-34938251)
chr5 (694-735)||(2030752-2030793)
chr5 (602-655)||(17908520-17908572)
chr5 (694-735)||(25003788-25003829)
chr5 (694-735)||(34938362-34938403)
chr5 (546-589)||(11764913-11764957)
chr5 (542-585)||(19872558-19872601)
chr5 (312-390)||(23112266-23112345)
[»] scaffold1486 (2 HSPs)
scaffold1486 (485-635)||(1599-1748)
scaffold1486 (128-277)||(1599-1748)
[»] scaffold0615 (2 HSPs)
scaffold0615 (129-355)||(7347-7571)
scaffold0615 (486-688)||(7373-7571)
[»] scaffold1666 (2 HSPs)
scaffold1666 (128-355)||(832-1071)
scaffold1666 (485-611)||(945-1071)
[»] chr1 (12 HSPs)
chr1 (602-735)||(20252983-20253115)
chr1 (502-655)||(20252795-20252947)
chr1 (245-358)||(20252983-20253096)
chr1 (312-390)||(32650500-32650578)
chr1 (145-297)||(20252795-20252947)
chr1 (546-589)||(18164808-18164851)
chr1 (542-592)||(20192828-20192878)
chr1 (250-297)||(20252944-20252991)
chr1 (542-585)||(25093480-25093523)
chr1 (185-235)||(20192828-20192878)
chr1 (185-224)||(25093480-25093519)
chr1 (312-358)||(20253311-20253357)
[»] scaffold0191 (4 HSPs)
scaffold0191 (129-254)||(140-261)
scaffold0191 (486-611)||(140-261)
scaffold0191 (486-519)||(117-150)
scaffold0191 (129-162)||(117-150)
[»] scaffold0892 (2 HSPs)
scaffold0892 (185-344)||(2530-2687)
scaffold0892 (542-685)||(2530-2670)
[»] scaffold0833 (4 HSPs)
scaffold0833 (129-292)||(1836-1997)
scaffold0833 (486-650)||(1836-1997)
scaffold0833 (312-408)||(2055-2151)
scaffold0833 (677-730)||(2061-2115)
[»] scaffold0244 (7 HSPs)
scaffold0244 (172-254)||(24434-24516)
scaffold0244 (259-348)||(24294-24383)
scaffold0244 (529-611)||(24434-24516)
scaffold0244 (486-547)||(24381-24444)
scaffold0244 (129-190)||(24381-24444)
scaffold0244 (312-356)||(24219-24263)
scaffold0244 (617-688)||(24313-24383)
[»] scaffold0125 (7 HSPs)
scaffold0125 (259-348)||(34167-34256)
scaffold0125 (129-190)||(34108-34169)
scaffold0125 (486-547)||(34108-34169)
scaffold0125 (129-170)||(30159-30200)
scaffold0125 (486-527)||(30159-30200)
scaffold0125 (312-356)||(34287-34331)
scaffold0125 (601-656)||(34151-34206)
[»] scaffold0029 (6 HSPs)
scaffold0029 (128-222)||(67085-67181)
scaffold0029 (485-579)||(67085-67181)
scaffold0029 (246-355)||(50979-51086)
scaffold0029 (218-297)||(51079-51158)
scaffold0029 (575-655)||(51079-51158)
scaffold0029 (603-655)||(51035-51086)
[»] scaffold0162 (6 HSPs)
scaffold0162 (244-326)||(17897-17979)
scaffold0162 (502-615)||(9460-9573)
scaffold0162 (145-258)||(9460-9573)
scaffold0162 (312-403)||(9280-9371)
scaffold0162 (601-654)||(17897-17949)
scaffold0162 (694-730)||(9311-9347)
[»] scaffold0686 (4 HSPs)
scaffold0686 (542-615)||(7394-7467)
scaffold0686 (185-258)||(7394-7467)
scaffold0686 (316-390)||(7230-7304)
scaffold0686 (694-735)||(7243-7284)
[»] scaffold0132 (4 HSPs)
scaffold0132 (542-615)||(12536-12609)
scaffold0132 (185-258)||(12536-12609)
scaffold0132 (312-390)||(12698-12776)
scaffold0132 (694-735)||(12722-12763)
[»] scaffold0016 (4 HSPs)
scaffold0016 (542-615)||(167597-167670)
scaffold0016 (185-258)||(167597-167670)
scaffold0016 (316-403)||(167419-167506)
scaffold0016 (694-735)||(167445-167486)
[»] scaffold0017 (2 HSPs)
scaffold0017 (132-242)||(42445-42554)
scaffold0017 (489-599)||(42445-42554)
[»] scaffold0138 (7 HSPs)
scaffold0138 (502-599)||(27918-28016)
scaffold0138 (502-599)||(39914-40012)
scaffold0138 (145-242)||(27918-28016)
scaffold0138 (145-242)||(39914-40012)
scaffold0138 (312-356)||(28214-28258)
scaffold0138 (312-356)||(40210-40254)
scaffold0138 (503-569)||(26904-26970)
[»] scaffold0158 (5 HSPs)
scaffold0158 (509-599)||(23472-23563)
scaffold0158 (312-403)||(23755-23846)
scaffold0158 (152-242)||(23472-23563)
scaffold0158 (542-615)||(23594-23668)
scaffold0158 (694-735)||(23779-23820)
[»] scaffold0335 (2 HSPs)
scaffold0335 (497-602)||(9517-9623)
scaffold0335 (140-245)||(9517-9623)
[»] scaffold0005 (2 HSPs)
scaffold0005 (542-607)||(247267-247333)
scaffold0005 (185-250)||(247267-247333)
[»] scaffold0165 (3 HSPs)
scaffold0165 (546-589)||(20754-20797)
scaffold0165 (546-589)||(28738-28781)
scaffold0165 (189-232)||(20754-20797)
[»] scaffold0361 (1 HSPs)
scaffold0361 (312-354)||(2620-2662)
[»] scaffold0133 (1 HSPs)
scaffold0133 (537-589)||(3203-3255)
[»] scaffold1427 (1 HSPs)
scaffold1427 (312-391)||(1408-1487)
[»] scaffold0409 (2 HSPs)
scaffold0409 (546-589)||(2632-2675)
scaffold0409 (546-589)||(10887-10930)
[»] scaffold0148 (1 HSPs)
scaffold0148 (546-589)||(36530-36573)
[»] scaffold0329 (1 HSPs)
scaffold0329 (546-586)||(1809-1849)
[»] scaffold1068 (1 HSPs)
scaffold1068 (546-589)||(1881-1924)
[»] scaffold0700 (1 HSPs)
scaffold0700 (546-589)||(1221-1264)
[»] scaffold0020 (1 HSPs)
scaffold0020 (546-589)||(104581-104624)
[»] scaffold0009 (1 HSPs)
scaffold0009 (546-589)||(98479-98523)
[»] scaffold0561 (1 HSPs)
scaffold0561 (546-599)||(4248-4303)
[»] scaffold0503 (1 HSPs)
scaffold0503 (546-589)||(10242-10285)
[»] scaffold0124 (1 HSPs)
scaffold0124 (312-375)||(36527-36590)


Alignment Details
Target: chr3 (Bit Score: 227; Significance: 1e-125; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 141 - 403
Target Start/End: Original strand, 17936907 - 17937169
Alignment:
Q  141 atcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcac 240  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17936907 atcatcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcac 17937006  T
Q  241 catatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatgga 340  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17937007 catatcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatgga 17937106  T
Q  341 ctcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttgttcttattccaag 403  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||| ||  ||||||||    
T  17937107 ctcaccaatatcatcaccaatatataatttcacatcaaatacatgatttgctcacattccaag 17937169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 128 - 355
Target Start/End: Complemental strand, 11987667 - 11987440
Alignment:
Q  128 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 227  Q
    ||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11987667 catcatcaccaaaatcatcaccaattggatatataaaaatattcgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 11987568  T
Q  228 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaa 327  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||| ||||||||    
T  11987567 cacaacaactcaccatatcatcaccattatttatttgcatttatgcaatcacaccaataattcatcaccacatgcataatcaataccatattataataaa 11987468  T
Q  328 caatgtatatggactcaccaatatcatc 355  Q
    ||||||||||| ||||||||||||||||    
T  11987467 caatgtatatgaactcaccaatatcatc 11987440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 141 - 357
Target Start/End: Original strand, 14283970 - 14284187
Alignment:
Q  141 atcatcaccaattggatatataaacatatct-gtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactca 239  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  14283970 atcatcaccaaatggatatataaacatatctagtcatcaccaaatatgcatgcatgaacatatgactcaataataatgcatatgtcgacacaagaactca 14284069  T
Q  240 ccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatgg 339  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| | || |||||| | ||||||||||||||||||||||||||    
T  14284070 ccatatcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcaccacattcacaatcaacatcatatcataataaacaatgtatatgg 14284169  T
Q  340 actcaccaatatcatcac 357  Q
    ||||||||||||||||||    
T  14284170 actcaccaatatcatcac 14284187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 128 - 355
Target Start/End: Original strand, 38166710 - 38166936
Alignment:
Q  128 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 227  Q
    |||||||| |||||| |||||||||||||| |||||||||||| |||||| ||||||||||||| |||||||||| ||||||||||||| ||||||||||    
T  38166710 catcatcatcaaaattatcaccaattggatgtataaacatatccgtcatcgccaaatatgtatgtatgaacatataactcaataataatacatatgtcca 38166809  T
Q  228 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaa 327  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||| | |||||| |||||| || |||||| ||    
T  38166810 cacaacaactcaccaaatcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcaccacatacataattaataccgtaccataat-aa 38166908  T
Q  328 caatgtatatggactcaccaatatcatc 355  Q
    |||||||||||||| |||||||||||||    
T  38166909 caatgtatatggacgcaccaatatcatc 38166936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 150; E-Value: 7e-79
Query Start/End: Original strand, 128 - 297
Target Start/End: Complemental strand, 11480580 - 11480411
Alignment:
Q  128 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 227  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  11480580 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgcatgcatgaacatatgactcaataataatgcatatgtcca 11480481  T
Q  228 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcacca 297  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||| ||||||||    
T  11480480 cacaacaactcaccaaatcatcaccaatatttatttgcatttatgcaatcacaccaataatccatcacca 11480411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 485 - 655
Target Start/End: Complemental strand, 11480580 - 11480411
Alignment:
Q  485 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttca 584  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||| ||    
T  11480580 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgcatgcatgaacatatgactcaataataatgcatatgtcca 11480481  T
Q  585 cacaacaactcaccatatcatcaccaatattttatttacatttatgcaatcacatcaataattcatcacca 655  Q
    ||||||||||||||| ||||||||||||| ||||||| |||||||||||||||| ||||||| ||||||||    
T  11480480 cacaacaactcaccaaatcatcaccaata-tttatttgcatttatgcaatcacaccaataatccatcacca 11480411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 485 - 656
Target Start/End: Complemental strand, 11987667 - 11987497
Alignment:
Q  485 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttca 584  Q
    ||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||| || ||||||||||| ||    
T  11987667 catcatcaccaaaatcatcaccaattggatatataaaaatattcgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 11987568  T
Q  585 cacaacaactcaccatatcatcaccaatattttatttacatttatgcaatcacatcaataattcatcaccac 656  Q
    |||||||||||||||||||||||||| || ||||||| |||||||||||||||| |||||||||||||||||    
T  11987567 cacaacaactcaccatatcatcaccatta-tttatttgcatttatgcaatcacaccaataattcatcaccac 11987497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 498 - 716
Target Start/End: Original strand, 17936907 - 17937124
Alignment:
Q  498 atcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcac 597  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||    
T  17936907 atcatcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcac 17937006  T
Q  598 catatcatcaccaatattttatttacatttatgcaatcacatcaataattcatcaccacgtatataatcatacatcatgtcataataaac-atacacatg 696  Q
    |||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| |  ||||||| | | ||| ||||||||||| ||  | |||    
T  17937007 catatcatcaccaata-tttatttgcatttatgcaatcacaccaataattcatcaccacttgcataatca-ataccatatcataataaacaatgtatatg 17937104  T
Q  697 gattcaccaatatcatcacc 716  Q
    || |||||||||||||||||    
T  17937105 gactcaccaatatcatcacc 17937124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 129 - 355
Target Start/End: Complemental strand, 12903355 - 12903132
Alignment:
Q  129 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccac 228  Q
    |||||||||||| ||||||||| ||||||||||||| |||||||||  || ||   ||||||||||||||||||||||||| || ||||||||||| |||    
T  12903355 atcatcaccaaagtcatcaccacttggatatataaa-atatctgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcac 12903257  T
Q  229 acaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaac 328  Q
    |||||||||||||| ||  ||||||||| ||||||||||| ||||||||| || |||||||||||||| | | ||||||||||||||||||||||| |||    
T  12903256 acaacaactcaccaaattctcaccaata-ttatttgcattcatgcaatcacaccaataattcatcaccgcatacataatcaataccatatcataat-aac 12903159  T
Q  329 aatgtatatggactcaccaatatcatc 355  Q
    ||| |||||||||||||||||||||||    
T  12903158 aatatatatggactcaccaatatcatc 12903132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 498 - 715
Target Start/End: Original strand, 14283970 - 14284187
Alignment:
Q  498 atcatcaccaattggatatataaacatatct-gtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactca 596  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| || |||||||||||  |||||| ||||||    
T  14283970 atcatcaccaaatggatatataaacatatctagtcatcaccaaatatgcatgcatgaacatatgactcaataataatgcatatgtcgacacaagaactca 14284069  T
Q  597 ccatatcatcaccaatattttatttacatttatgcaatcacatcaataattcatcaccacgtatataatcatacatcatgtcataataaac-atacacat 695  Q
    ||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| |  | ||||| ||||||| ||||||||||| ||  | ||    
T  14284070 ccatatcatcaccaata-tttatttgcatttatgcaatcacaccaataattcatcaccacattcacaatca-acatcatatcataataaacaatgtatat 14284167  T
Q  696 ggattcaccaatatcatcac 715  Q
    ||| ||||||||||||||||    
T  14284168 ggactcaccaatatcatcac 14284187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 485 - 665
Target Start/End: Original strand, 38166710 - 38166889
Alignment:
Q  485 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttca 584  Q
    |||||||| |||||| |||||||||||||| |||||||||||| |||||| ||||||||||||| |||||||||| |||||| || ||| ||||||| ||    
T  38166710 catcatcatcaaaattatcaccaattggatgtataaacatatccgtcatcgccaaatatgtatgtatgaacatataactcaataataatacatatgtcca 38166809  T
Q  585 cacaacaactcaccatatcatcaccaatattttatttacatttatgcaatcacatcaataattcatcaccacgtatataat 665  Q
    ||||||||||||||| ||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| || |||||    
T  38166810 cacaacaactcaccaaatcatcaccaata-tttatttgcatttatgcaatcacaccaataattcatcaccacatacataat 38166889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 617 - 735
Target Start/End: Complemental strand, 9304051 - 9303933
Alignment:
Q  617 tatttacatttatgcaatcacatcaataattcatcaccacgtatataatcatacatcatgtcataataaacatacacatggattcaccaatatcatcacc 716  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  9304051 tatttgcatttatgcaatcacatcaataattcatcaccacttatataatcatacaccatgtcataataaacatacgcatggattcaccaatatcatcacc 9303952  T
Q  717 ttctcataatttcatatca 735  Q
    |||||||||||||||||||    
T  9303951 ttctcataatttcatatca 9303933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 486 - 713
Target Start/End: Complemental strand, 12903355 - 12903132
Alignment:
Q  486 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcac 585  Q
    |||||||||||| ||||||||| ||||||||||||| |||||||||  || ||   ||||||||||||||||||||||||||||||||||||||||||||    
T  12903355 atcatcaccaaagtcatcaccacttggatatataaa-atatctgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcac 12903257  T
Q  586 acaacaactcaccatatcatcaccaatattttatttacatttatgcaatcacatcaataattcatcaccacgtatataatcatacatcatgtcataataa 685  Q
    |||||||||||||| ||  |||||||||  |||||| |||| ||||||||||| ||||||||||||||| | || ||||||| | | ||| |||||||||    
T  12903256 acaacaactcaccaaattctcaccaata--ttatttgcattcatgcaatcacaccaataattcatcaccgcatacataatca-ataccatatcataataa 12903160  T
Q  686 acatacacatggattcaccaatatcatc 713  Q
      ||| | ||||| ||||||||||||||    
T  12903159 caatatatatggactcaccaatatcatc 12903132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 530 - 611
Target Start/End: Complemental strand, 9304181 - 9304100
Alignment:
Q  530 tcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatatcatcaccaa 611  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  9304181 tcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgtccacacaacaactcaccatatcatcaccaa 9304100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 486 - 615
Target Start/End: Original strand, 18738472 - 18738601
Alignment:
Q  486 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcac 585  Q
    ||||||||||| |||||||||| ||||||||||||| ||||| |||  || ||   ||||||||||||||||||||||||| |||||||||||||||||     
T  18738472 atcatcaccaatatcatcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaataacaatgcatatgttcat 18738571  T
Q  586 acaacaactcaccatatcatcaccaatatt 615  Q
    ||||||||||||||||||||||||| ||||    
T  18738572 acaacaactcaccatatcatcaccactatt 18738601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 173 - 254
Target Start/End: Complemental strand, 9304181 - 9304100
Alignment:
Q  173 tcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaa 254  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  9304181 tcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgtccacacaacaactcaccatatcatcaccaa 9304100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 129 - 258
Target Start/End: Original strand, 18738472 - 18738601
Alignment:
Q  129 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccac 228  Q
    ||||||||||| |||||||||| ||||||||||||| ||||| |||  || ||   |||||||||||||||||||||||||||| ||||||||||| ||     
T  18738472 atcatcaccaatatcatcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaataacaatgcatatgttcat 18738571  T
Q  229 acaacaactcaccatatcatcaccaatatt 258  Q
    ||||||||||||||||||||||||| ||||    
T  18738572 acaacaactcaccatatcatcaccactatt 18738601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 246 - 355
Target Start/End: Complemental strand, 11480418 - 11480311
Alignment:
Q  246 catcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcac 345  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||  | ||||||||||||||||||| ||| ||||| ||||| || |||||    
T  11480418 catcaccaatatttatttgcatttatgcaatcacaccaataattcatcacca-atacataatcaataccatatcacaat-aacaacgtatacgggctcac 11480321  T
Q  346 caatatcatc 355  Q
    ||||||||||    
T  11480320 caatatcatc 11480311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 542 - 615
Target Start/End: Complemental strand, 51962663 - 51962590
Alignment:
Q  542 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatatcatcaccaatatt 615  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||    
T  51962663 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcgccatattctcaccaatatt 51962590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 502 - 599
Target Start/End: Complemental strand, 54040151 - 54040053
Alignment:
Q  502 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcacca 599  Q
    |||||| ||||||||||||| |||||||||  || ||   ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  54040151 tcaccatttggatatataaaaatatctgtctccatcagtcatgtatgtatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 54040053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 502 - 599
Target Start/End: Complemental strand, 54049438 - 54049340
Alignment:
Q  502 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcacca 599  Q
    |||||| ||||||||||||| |||||||||  || ||   ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  54049438 tcaccatttggatatataaaaatatctgtctccatcagtcatgtatgtatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 54049340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 486 - 547
Target Start/End: Complemental strand, 9304110 - 9304049
Alignment:
Q  486 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtat 547  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  9304110 atcatcaccaaaatcatcaccaattggatatataaacatatccgtcatcaccaaacatgtat 9304049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 9304110 - 9304049
Alignment:
Q  129 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtat 190  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  9304110 atcatcaccaaaatcatcaccaattggatatataaacatatccgtcatcaccaaacatgtat 9304049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 185 - 258
Target Start/End: Complemental strand, 51962663 - 51962590
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaatatt 258  Q
    ||||||||||||||||||||||||| || ||||||||||| ||||||||||||| ||||||  |||||||||||    
T  51962663 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcgccatattctcaccaatatt 51962590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 316 - 403
Target Start/End: Complemental strand, 54039857 - 54039770
Alignment:
Q  316 tatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttgttcttattccaag 403  Q
    ||||||||||||||||||||||||| |||||||||||||||||   || || ||||||||||||| ||||||||| ||  ||||||||    
T  54039857 tatcataataaacaatgtatatggattcaccaatatcatcaccttcatatagtttcacatcaaatacatgatttgctcacattccaag 54039770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 312 - 390
Target Start/End: Original strand, 18892840 - 18892918
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttg 390  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||  ||  ||||| ||||||||||  ||||||||    
T  18892840 accatatcataataaacaatgtatatggattcaccaatatcatcacctttacataattacacatcaaatatatgatttg 18892918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 541 - 612
Target Start/End: Complemental strand, 11516979 - 11516909
Alignment:
Q  541 tatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatatcatcaccaat 612  Q
    ||||||||||||||||||||||||  || ||||||||||||||||||||||| | |||| ||||||||||||    
T  11516979 tatgtatgcatgaacatatgactcggca-caatgcatatgttcacacaacaatttaccacatcatcaccaat 11516909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 316 - 403
Target Start/End: Complemental strand, 51962477 - 51962390
Alignment:
Q  316 tatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttgttcttattccaag 403  Q
    ||||||||||||||||||||||||| |||||||||||||||||   |  |||||||||||||| | ||||||||| ||  ||||||||    
T  51962477 tatcataataaacaatgtatatggattcaccaatatcatcaccttcacataatttcacatcaattacatgatttgctcacattccaag 51962390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 145 - 242
Target Start/End: Complemental strand, 54040151 - 54040053
Alignment:
Q  145 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 242  Q
    |||||| ||||||||||||| |||||||||  || ||   ||||||| ||||||||||||||||| || ||||||||||| ||||| ||||||||||||    
T  54040151 tcaccatttggatatataaaaatatctgtctccatcagtcatgtatgtatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 54040053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 145 - 242
Target Start/End: Complemental strand, 54049438 - 54049340
Alignment:
Q  145 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 242  Q
    |||||| ||||||||||||| |||||||||  || ||   ||||||| ||||||||||||||||| || ||||||||||| ||||| ||||||||||||    
T  54049438 tcaccatttggatatataaaaatatctgtctccatcagtcatgtatgtatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 54049340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 312 - 377
Target Start/End: Original strand, 23174560 - 23174625
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatca 377  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||  ||  |||||||||||||    
T  23174560 accatatcataataaacaaagtatatggattcaccaatatcatcacctttacataatttcacatca 23174625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 316 - 376
Target Start/End: Original strand, 18889617 - 18889677
Alignment:
Q  316 tatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatc 376  Q
    ||||||||||||||||||||||||| |||||||||||||||||  ||  ||||||||||||    
T  18889617 tatcataataaacaatgtatatggattcaccaatatcatcacctttacataatttcacatc 18889677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 312 - 355
Target Start/End: Complemental strand, 9303713 - 9303670
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatc 355  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  9303713 accatatcataataaacaatgtatatggattcaccaatatcatc 9303670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 542 - 589
Target Start/End: Complemental strand, 31413760 - 31413713
Alignment:
Q  542 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||    
T  31413760 atgtatgcataaacatatgtctcaacaacaatgcatatgttcacacaa 31413713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 546 - 589
Target Start/End: Complemental strand, 31413845 - 31413802
Alignment:
Q  546 atgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  31413845 atgcatgaacatatgactcgacaacaatgcatatgttcacacaa 31413802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 259 - 358
Target Start/End: Complemental strand, 9304051 - 9303952
Alignment:
Q  259 tatttgcatttatgcaatcatacgaataattcatcaccacttgcataatca-ataccatatcataataaacaatgtatatggactcaccaatatcatcac 357  Q
    |||||||||||||||||||| |  ||||||||||||||||||  ||||||| | ||||| ||||||||||| ||    ||||| ||||||||||||||||    
T  9304051 tatttgcatttatgcaatcacatcaataattcatcaccacttatataatcatacaccatgtcataataaac-atacgcatggattcaccaatatcatcac 9303953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 603 - 655
Target Start/End: Complemental strand, 11480418 - 11480367
Alignment:
Q  603 catcaccaatattttatttacatttatgcaatcacatcaataattcatcacca 655  Q
    |||||||||||||| |||| |||||||||||||||| ||||||||||||||||    
T  11480418 catcaccaatattt-atttgcatttatgcaatcacaccaataattcatcacca 11480367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 542 - 585
Target Start/End: Original strand, 10903074 - 10903117
Alignment:
Q  542 atgtatgcatgaacatatgactcaacaacaatgcatatgttcac 585  Q
    ||||||||||||||||||||||| |||| |||||||||||||||    
T  10903074 atgtatgcatgaacatatgactcgacaataatgcatatgttcac 10903117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 546 - 589
Target Start/End: Original strand, 11637141 - 11637184
Alignment:
Q  546 atgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    ||||||||||||||||||| |||||||| |||||||||||||||    
T  11637141 atgcatgaacatatgactcgacaacaatccatatgttcacacaa 11637184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 542 - 615
Target Start/End: Complemental strand, 54040022 - 54039948
Alignment:
Q  542 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcaccatatcatcaccaatatt 615  Q
    |||||||||| |||||||  |||||||||||| |||||||||| || ||||| |||||||||  |||||||||||    
T  54040022 atgtatgcataaacatatatctcaacaacaatacatatgttcatacaaacaattcaccatattctcaccaatatt 54039948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 542 - 615
Target Start/End: Complemental strand, 54049309 - 54049235
Alignment:
Q  542 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcaccatatcatcaccaatatt 615  Q
    |||||||||| |||||||  |||||||||||| |||||||||| || ||||| |||||||||  |||||||||||    
T  54049309 atgtatgcataaacatatatctcaacaacaatacatatgttcatacaaacaattcaccatattctcaccaatatt 54049235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 694 - 735
Target Start/End: Complemental strand, 51962457 - 51962416
Alignment:
Q  694 atggattcaccaatatcatcaccttctcataatttcatatca 735  Q
    |||||||||||||||||||||||||| |||||||||| ||||    
T  51962457 atggattcaccaatatcatcaccttcacataatttcacatca 51962416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 546 - 589
Target Start/End: Original strand, 8603327 - 8603370
Alignment:
Q  546 atgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    |||||| |||||||| |||||||| |||||||||||||||||||    
T  8603327 atgcataaacatatgtctcaacaataatgcatatgttcacacaa 8603370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 224
Target Start/End: Original strand, 10903074 - 10903113
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgt 224  Q
    ||||||||||||||||||||||| | ||||||||||||||    
T  10903074 atgtatgcatgaacatatgactcgacaataatgcatatgt 10903113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 312 - 403
Target Start/End: Original strand, 18738690 - 18738780
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttgttcttattccaag 403  Q
    ||||||| ||||||| ||| ||||||||| |||||||||||||||||   |  |||||||||||||| | ||||||||| ||  ||||||||    
T  18738690 accatattataataa-caaagtatatggattcaccaatatcatcacctccacataatttcacatcaattacatgatttgctcacattccaag 18738780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 694 - 736
Target Start/End: Original strand, 23174584 - 23174626
Alignment:
Q  694 atggattcaccaatatcatcaccttctcataatttcatatcag 736  Q
    |||||||||||||||||||||||||  |||||||||| |||||    
T  23174584 atggattcaccaatatcatcacctttacataatttcacatcag 23174626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 694 - 735
Target Start/End: Original strand, 18738713 - 18738754
Alignment:
Q  694 atggattcaccaatatcatcaccttctcataatttcatatca 735  Q
    |||||||||||||||||||||||| | |||||||||| ||||    
T  18738713 atggattcaccaatatcatcacctccacataatttcacatca 18738754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 189; Significance: 1e-102; HSPs: 2)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 141 - 357
Target Start/End: Original strand, 16611 - 16827
Alignment:
Q  141 atcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcac 240  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16611 atcatcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcac 16710  T
Q  241 catatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatgga 340  Q
    |||||||||||||||||||||||||||||||| ||||| || |||||||||||||||| | || ||||||||||||||||||||||||||||||||||||    
T  16711 catatcatcaccaatatttatttgcatttatgaaatcacaccaataattcatcaccacattcacaatcaataccatatcataataaacaatgtatatgga 16810  T
Q  341 ctcaccaatatcatcac 357  Q
    |||||||||||||||||    
T  16811 ctcaccaatatcatcac 16827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #2
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 498 - 656
Target Start/End: Original strand, 16611 - 16768
Alignment:
Q  498 atcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcac 597  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||    
T  16611 atcatcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcac 16710  T
Q  598 catatcatcaccaatattttatttacatttatgcaatcacatcaataattcatcaccac 656  Q
    |||||||||||||||| ||||||| |||||||| ||||||| |||||||||||||||||    
T  16711 catatcatcaccaata-tttatttgcatttatgaaatcacaccaataattcatcaccac 16768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 185; Significance: 1e-100; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 128 - 355
Target Start/End: Complemental strand, 35748 - 35521
Alignment:
Q  128 catcatcaccaaaatcatcaccaatt-ggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcc 226  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  35748 catcatcaccaaaatcatcaccaatttggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgacttaataataatgcatatgtcc 35649  T
Q  227 acacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataa 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||| || |||||||||||||||||||||| |    
T  35648 acacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcacaccaacaattcatcaccacatggataatcaataccatatcataat-a 35550  T
Q  327 acaatgtatatggactcaccaatatcatc 355  Q
    |||||||||||||||||||||||||||||    
T  35549 acaatgtatatggactcaccaatatcatc 35521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118; HSP #2
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 485 - 713
Target Start/End: Complemental strand, 35748 - 35521
Alignment:
Q  485 catcatcaccaaaatcatcaccaatt-ggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttc 583  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| || || ||||||||||| |    
T  35748 catcatcaccaaaatcatcaccaatttggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgacttaataataatgcatatgtcc 35649  T
Q  584 acacaacaactcaccatatcatcaccaatattttatttacatttatgcaatcacatcaataattcatcaccacgtatataatcatacatcatgtcataat 683  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||| ||||||||||||| |  ||||||| | | ||| |||||||    
T  35648 acacaacaactcaccatatcatcaccaata-tttatttgcatttatgcaatcacaccaacaattcatcaccacatggataatca-ataccatatcataat 35551  T
Q  684 aaacatacacatggattcaccaatatcatc 713  Q
    ||  ||  | ||||| ||||||||||||||    
T  35550 aacaatgtatatggactcaccaatatcatc 35521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 128 - 355
Target Start/End: Original strand, 13319959 - 13320187
Alignment:
Q  128 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaa-tatgtatgcatgaacatatgactcaataataatgcatatgtcc 226  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  13319959 catcatcaccaaaatcatcaccaattggatatataaaaatatccgtcatcaccaaaatatgtatgcatgaacatatgactcaataataatgcatatgtcc 13320058  T
Q  227 acacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataa 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||| | |||||||| |||||||||||||| |||    
T  13320059 acacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcacaccaatgattcatcacctcatgcataattaataccatatcatagtaa 13320158  T
Q  327 acaatgtatatggactcaccaatatcatc 355  Q
    |||||||||||||||||||||||||||||    
T  13320159 acaatgtatatggactcaccaatatcatc 13320187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 180; E-Value: 8e-97
Query Start/End: Original strand, 128 - 355
Target Start/End: Original strand, 3048391 - 3048617
Alignment:
Q  128 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 227  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3048391 catcatcaccaaaatcatcatcaattggatatataaacatatccgtcatcaccaaatatgtatgtatgaacatatgactcaataataatgcatatgtcca 3048490  T
Q  228 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaa 327  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||| | |||||||||||||||| |||||| ||    
T  3048491 cacaacaactcaccaaatcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcaccacatacataatcaataccataccataat-aa 3048589  T
Q  328 caatgtatatggactcaccaatatcatc 355  Q
    |||||||||||||| |||||||||||||    
T  3048590 caatgtatatggacgcaccaatatcatc 3048617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 485 - 667
Target Start/End: Original strand, 3048391 - 3048572
Alignment:
Q  485 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttca 584  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| || ||||||||||| ||    
T  3048391 catcatcaccaaaatcatcatcaattggatatataaacatatccgtcatcaccaaatatgtatgtatgaacatatgactcaataataatgcatatgtcca 3048490  T
Q  585 cacaacaactcaccatatcatcaccaatattttatttacatttatgcaatcacatcaataattcatcaccacgtatataatca 667  Q
    ||||||||||||||| ||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| || |||||||    
T  3048491 cacaacaactcaccaaatcatcaccaata-tttatttgcatttatgcaatcacaccaataattcatcaccacatacataatca 3048572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 485 - 654
Target Start/End: Original strand, 13319959 - 13320128
Alignment:
Q  485 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaa-tatgtatgcatgaacatatgactcaacaacaatgcatatgttc 583  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||| || ||||||||||| |    
T  13319959 catcatcaccaaaatcatcaccaattggatatataaaaatatccgtcatcaccaaaatatgtatgcatgaacatatgactcaataataatgcatatgtcc 13320058  T
Q  584 acacaacaactcaccatatcatcaccaatattttatttacatttatgcaatcacatcaataattcatcacc 654  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||| ||||||||||    
T  13320059 acacaacaactcaccatatcatcaccaata-tttatttgcatttatgcaatcacaccaatgattcatcacc 13320128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 129 - 292
Target Start/End: Complemental strand, 47482433 - 47482272
Alignment:
Q  129 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccac 228  Q
    |||||||||||||||||||| | ||||||||||||| ||||| |||  || ||   ||||||||||||||||||||||||||||||||||||||||||||    
T  47482433 atcatcaccaaaatcatcacaatttggatatataaa-atatccgtctccatcagtcatgtatgcatgaacatatgactcaataataatgcatatgtccac 47482335  T
Q  229 acaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcat 292  Q
    |||||||||||||| ||  ||||||||| ||||||||||||||||||||| || ||||||||||    
T  47482334 acaacaactcaccaaattctcaccaata-ttatttgcatttatgcaatcacaccaataattcat 47482272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 129 - 344
Target Start/End: Complemental strand, 48623875 - 48623663
Alignment:
Q  129 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccac 228  Q
    |||||||||||||||||||||| || ||||| |||| |||||  ||  || ||   ||||||||||||||||||||||||||||||||||||||||||||    
T  48623875 atcatcaccaaaatcatcaccatttagatatgtaaa-atatccatctccatcagtcatgtatgcatgaacatatgactcaataataatgcatatgtccac 48623777  T
Q  229 acaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaac 328  Q
    |||||||||||||| ||  ||||||||| ||||||||||||| || |||| || |||||||||||||||| |  |||||||  | ||||||| ||| |||    
T  48623776 acaacaactcaccaaattctcaccaata-ttatttgcatttacgcgatcacaccaataattcatcaccacataaataatcatcatcatatcacaat-aac 48623679  T
Q  329 aatgtatatggactca 344  Q
    ||| |||||| |||||    
T  48623678 aatatatatgaactca 48623663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 486 - 650
Target Start/End: Complemental strand, 47482433 - 47482272
Alignment:
Q  486 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcac 585  Q
    |||||||||||||||||||| | ||||||||||||| ||||| |||  || ||   ||||||||||||||||||||||||| || ||||||||||| |||    
T  47482433 atcatcaccaaaatcatcacaatttggatatataaa-atatccgtctccatcagtcatgtatgcatgaacatatgactcaataataatgcatatgtccac 47482335  T
Q  586 acaacaactcaccatatcatcaccaatattttatttacatttatgcaatcacatcaataattcat 650  Q
    |||||||||||||| ||  |||||||||  |||||| |||||||||||||||| |||||||||||    
T  47482334 acaacaactcaccaaattctcaccaata--ttatttgcatttatgcaatcacaccaataattcat 47482272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 486 - 685
Target Start/End: Complemental strand, 48623875 - 48623680
Alignment:
Q  486 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcac 585  Q
    |||||||||||||||||||||| || ||||| |||| |||||  ||  || ||   ||||||||||||||||||||||||| || ||||||||||| |||    
T  48623875 atcatcaccaaaatcatcaccatttagatatgtaaa-atatccatctccatcagtcatgtatgcatgaacatatgactcaataataatgcatatgtccac 48623777  T
Q  586 acaacaactcaccatatcatcaccaatattttatttacatttatgcaatcacatcaataattcatcaccacgtatataatcatacatcatgtcataataa 685  Q
    |||||||||||||| ||  |||||||||  |||||| |||||| || |||||| ||||||||||||||||| || |||||||| |||||| ||| |||||    
T  48623776 acaacaactcaccaaattctcaccaata--ttatttgcatttacgcgatcacaccaataattcatcaccacataaataatcat-catcatatcacaataa 48623680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 503 - 599
Target Start/End: Complemental strand, 7286032 - 7285936
Alignment:
Q  503 caccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcacca 599  Q
    ||||| ||||||||||||| |||||||||  || ||   |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  7286032 caccatttggatatataaaaatatctgtcgccatcagtcatgtatgcatgaacatatgaatcaacaataatgcatatgttcacacaacaactcacca 7285936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 502 - 599
Target Start/End: Complemental strand, 14252907 - 14252809
Alignment:
Q  502 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcacca 599  Q
    |||||| ||||||||||||| ||||| |||  || ||   |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  14252907 tcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 14252809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 146 - 242
Target Start/End: Complemental strand, 7286032 - 7285936
Alignment:
Q  146 caccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcacca 242  Q
    ||||| ||||||||||||| |||||||||  || ||   |||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||    
T  7286032 caccatttggatatataaaaatatctgtcgccatcagtcatgtatgcatgaacatatgaatcaacaataatgcatatgttcacacaacaactcacca 7285936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 312 - 403
Target Start/End: Complemental strand, 47482216 - 47482125
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttgttcttattccaag 403  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||    || |||||||||||||||| ||||||||| ||  ||||||||    
T  47482216 accatatcataataaacaatatatatggattcaccaatatcatcacattcatataatttcacatcaaatacatgatttgctcacattccaag 47482125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 145 - 242
Target Start/End: Complemental strand, 14252907 - 14252809
Alignment:
Q  145 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 242  Q
    |||||| ||||||||||||| ||||| |||  || ||   ||||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||    
T  14252907 tcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 14252809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 312 - 403
Target Start/End: Complemental strand, 7285743 - 7285652
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttgttcttattccaag 403  Q
    ||||||||||||||||||||||||||| |  ||||||||||||||||   |  |||||||||||||||  ||||||||| ||  ||||||||    
T  7285743 accatatcataataaacaatgtatatgaatccaccaatatcatcaccttcacataatttcacatcaaacacatgatttgctcacattccaag 7285652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 312 - 403
Target Start/End: Complemental strand, 15761473 - 15761382
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttgttcttattccaag 403  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||   |  |||||||||||||  | ||||||||| ||  ||||||||    
T  15761473 accatatcataataaacaatgtatatggattcaccaaaatcatcaccttcacataatttcacatcacttacatgatttgctcacattccaag 15761382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 546 - 589
Target Start/End: Complemental strand, 39293276 - 39293233
Alignment:
Q  546 atgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  39293276 atgcatgaacatatgactcgacaacaatgcatatgttcacacaa 39293233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 542 - 589
Target Start/End: Complemental strand, 44306721 - 44306674
Alignment:
Q  542 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||    
T  44306721 atgtatgcataaacatatgtctcaacaacaatgcatatgttcacacaa 44306674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 546 - 589
Target Start/End: Complemental strand, 44306806 - 44306763
Alignment:
Q  546 atgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  44306806 atgcatgaacatatgactcgacaacaatgcatatgttcacacaa 44306763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 542 - 580
Target Start/End: Original strand, 12246624 - 12246662
Alignment:
Q  542 atgtatgcatgaacatatgactcaacaacaatgcatatg 580  Q
    |||||||||||||||||||||||||||||||||||||||    
T  12246624 atgtatgcatgaacatatgactcaacaacaatgcatatg 12246662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 543 - 589
Target Start/End: Complemental strand, 39293190 - 39293144
Alignment:
Q  543 tgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||    
T  39293190 tgtatgcataaacatatgtctcaacaacaatgcatatgttcacacaa 39293144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 14252613 - 14252568
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcac 357  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||    
T  14252613 accatatcataataaacaatgtatatggattcatcaatatcatcac 14252568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 589
Target Start/End: Complemental strand, 14276526 - 14276482
Alignment:
Q  546 atgcatgaacatatgactcaacaac-aatgcatatgttcacacaa 589  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  14276526 atgcatgaacatatgactcaacaacaaatgcatatgttcacacaa 14276482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 550 - 589
Target Start/End: Original strand, 3136128 - 3136167
Alignment:
Q  550 atgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  3136128 atgaacatatgactcaacaacaatgcatatgttgacacaa 3136167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 546 - 589
Target Start/End: Original strand, 28389072 - 28389115
Alignment:
Q  546 atgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    ||||||||||||||||||| |||||||| |||||||||||||||    
T  28389072 atgcatgaacatatgactcgacaacaatccatatgttcacacaa 28389115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 549 - 589
Target Start/End: Complemental strand, 18081151 - 18081110
Alignment:
Q  549 catgaacatatgactcaacaac-aatgcatatgttcacacaa 589  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  18081151 catgaacatatgactcaacaacaaatgcatatgttcacacaa 18081110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 223
Target Start/End: Original strand, 12246624 - 12246662
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatg 223  Q
    ||||||||||||||||||||||||| || ||||||||||    
T  12246624 atgtatgcatgaacatatgactcaacaacaatgcatatg 12246662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 694 - 735
Target Start/End: Complemental strand, 15761449 - 15761408
Alignment:
Q  694 atggattcaccaatatcatcaccttctcataatttcatatca 735  Q
    ||||||||||||| |||||||||||| |||||||||| ||||    
T  15761449 atggattcaccaaaatcatcaccttcacataatttcacatca 15761408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 185; Significance: 1e-100; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 141 - 357
Target Start/End: Complemental strand, 14503084 - 14502868
Alignment:
Q  141 atcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcac 240  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14503084 atcatcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcac 14502985  T
Q  241 catatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatgga 340  Q
    || ||||||||||||||||||||||| ||||||||||| || |||||||||||||||| | || ||||||||||||||||||||||||||||||||||||    
T  14502984 caaatcatcaccaatatttatttgcagttatgcaatcacaccaataattcatcaccacattcacaatcaataccatatcataataaacaatgtatatgga 14502885  T
Q  341 ctcaccaatatcatcac 357  Q
    |||||||||||||||||    
T  14502884 ctcaccaatatcatcac 14502868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 128 - 355
Target Start/End: Complemental strand, 32462034 - 32461807
Alignment:
Q  128 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 227  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  32462034 catcatcaccaaaatcatcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatggacatatgactcaataataatgcatatgtcca 32461935  T
Q  228 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaata--ccatatcataata 325  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||||| | ||||||||| |   |||||||| ||     
T  32461934 cacaacaactcatcatatcatcaccaatatttatttgcatttatgcaatcaaaccaataattcatcaccacatacataatcaacaatacatatcat-att 32461836  T
Q  326 aacaatgtatatggactcaccaatatcatc 355  Q
    ||||||| ||||||| ||||||||||||||    
T  32461835 aacaatg-atatggattcaccaatatcatc 32461807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 128 - 355
Target Start/End: Original strand, 9793988 - 9794229
Alignment:
Q  128 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 227  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9793988 catcatcaccaaaatcatcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 9794087  T
Q  228 cacaacaactcaccata--------------tcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaatac 313  Q
    ||||||||||||||| |              ||||||||||| ||||||||||||||||| |||| || ||||||||||||| || | || |||||||||    
T  9794088 cacaacaactcaccaaaacatcaccaataattcatcaccaatttttatttgcatttatgcgatcacaccaataattcatcactacattcacaatcaatac 9794187  T
Q  314 catatcataataaacaatgtatatggactcaccaatatcatc 355  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  9794188 catatcataataaacaatgtatatggactcaccaatatcatc 9794229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 156 - 353
Target Start/End: Complemental strand, 23271628 - 23271432
Alignment:
Q  156 atatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaat 255  Q
    ||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23271628 atatataaaaatatccgtcatcaccaaaaatgtatgcatgaacatatgactcaataacaatgcatatgtccacacaacaactcaccatatcatcaccaat 23271529  T
Q  256 atttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcaccaatatca 353  Q
    | ||||||||||||||||||| | || |||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  23271528 a-ttatttgcatttatgcaattacaccaataattcatcaccacatacataatcaacaccatatcataataaacaatgtatatggattcaccaatatca 23271432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 485 - 667
Target Start/End: Complemental strand, 32462034 - 32461853
Alignment:
Q  485 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttca 584  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| || ||||||||||| ||    
T  32462034 catcatcaccaaaatcatcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatggacatatgactcaataataatgcatatgtcca 32461935  T
Q  585 cacaacaactcaccatatcatcaccaatattttatttacatttatgcaatcacatcaataattcatcaccacgtatataatca 667  Q
    |||||||||||| |||||||||||||||| ||||||| |||||||||||||| | ||||||||||||||||| || |||||||    
T  32461934 cacaacaactcatcatatcatcaccaata-tttatttgcatttatgcaatcaaaccaataattcatcaccacatacataatca 32461853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 498 - 656
Target Start/End: Complemental strand, 14503084 - 14502927
Alignment:
Q  498 atcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcac 597  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||    
T  14503084 atcatcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcac 14502985  T
Q  598 catatcatcaccaatattttatttacatttatgcaatcacatcaataattcatcaccac 656  Q
    || ||||||||||||| ||||||| || ||||||||||||| |||||||||||||||||    
T  14502984 caaatcatcaccaata-tttatttgcagttatgcaatcacaccaataattcatcaccac 14502927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 513 - 735
Target Start/End: Complemental strand, 23271628 - 23271409
Alignment:
Q  513 atatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatatcatcaccaat 612  Q
    ||||||||| ||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  23271628 atatataaaaatatccgtcatcaccaaaaatgtatgcatgaacatatgactcaataacaatgcatatgtccacacaacaactcaccatatcatcaccaat 23271529  T
Q  613 attttatttacatttatgcaatcacatcaataattcatcaccacgtatataatcatacatcatgtcataataaac-atacacatggattcaccaatatca 711  Q
    |  |||||| |||||||||||| ||| ||||||||||||||||| || ||||||| ||| ||| ||||||||||| ||  | ||||||||||||||||||    
T  23271528 a--ttatttgcatttatgcaattacaccaataattcatcaccacatacataatca-acaccatatcataataaacaatgtatatggattcaccaatatca 23271432  T
Q  712 tcaccttctcataatttcatatca 735  Q
     | ||||| |||||| ||||||||    
T  23271431 -ccccttcacataatctcatatca 23271409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 485 - 613
Target Start/End: Original strand, 9793988 - 9794116
Alignment:
Q  485 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttca 584  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||| ||    
T  9793988 catcatcaccaaaatcatcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 9794087  T
Q  585 cacaacaactcaccatatcatcaccaata 613  Q
    ||||||||||||||| | |||||||||||    
T  9794088 cacaacaactcaccaaaacatcaccaata 9794116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 631 - 735
Target Start/End: Original strand, 19019154 - 19019258
Alignment:
Q  631 caatcacatcaataattcatcaccacgtatataatcatacatcatgtcataataaacatacacatggattcaccaatatcatcaccttctcataatttca 730  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19019154 caatcacaccaataattcatcaccacgtatataatcatacaccatgtcataataaacatacacatggattcaccaatatcatcaccttctcataatttca 19019253  T
Q  731 tatca 735  Q
    |||||    
T  19019254 tatca 19019258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 150 - 250
Target Start/End: Original strand, 8043708 - 8043808
Alignment:
Q  150 aattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatc 249  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8043708 aattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaatattaatgcatatgtccacacaacaactcaccatatcatc 8043807  T
Q  250 a 250  Q
    |    
T  8043808 a 8043808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 507 - 607
Target Start/End: Original strand, 8043708 - 8043808
Alignment:
Q  507 aattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatatcatc 606  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |  ||||||||||| ||||||||||||||||||||||||    
T  8043708 aattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaatattaatgcatatgtccacacaacaactcaccatatcatc 8043807  T
Q  607 a 607  Q
    |    
T  8043808 a 8043808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 245 - 355
Target Start/End: Complemental strand, 19698845 - 19698737
Alignment:
Q  245 tcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactca 344  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||  | ||||||||||||||||||||||| |||||||||||||||||||    
T  19698845 tcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcacca-atacataatcaataccatatcataat-aacaatgtatatggactca 19698748  T
Q  345 ccaatatcatc 355  Q
    |||||||||||    
T  19698747 ccaatatcatc 19698737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 245 - 355
Target Start/End: Complemental strand, 19709430 - 19709322
Alignment:
Q  245 tcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactca 344  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||  | ||||||||||||||||||||||| |||||||||||||||||||    
T  19709430 tcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcacca-atacataatcaataccatatcataat-aacaatgtatatggactca 19709333  T
Q  345 ccaatatcatc 355  Q
    |||||||||||    
T  19709332 ccaatatcatc 19709322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 498 - 615
Target Start/End: Original strand, 22737247 - 22737364
Alignment:
Q  498 atcatcaccaat-tggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactca 596  Q
    |||||||||||| |||||||||||| ||||| | || || ||   |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22737247 atcatcaccaatatggatatataaa-atatccgccaccatcaggcatgtatgcatgaacatatgactcaacaacaatgcatatgttcccacaacaactca 22737345  T
Q  597 ccatatcatcaccaatatt 615  Q
    ||||||   ||||||||||    
T  22737346 ccatattcacaccaatatt 22737364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 503 - 599
Target Start/End: Complemental strand, 55378338 - 55378242
Alignment:
Q  503 caccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcacca 599  Q
    ||||| ||||||||||||| ||||| |||| || ||   |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  55378338 caccatttggatatataaaaatatccgtcaccatcagtcatgtatgcatgaacgtatgactcaacaacaatgcatatgttcacacaataactcacca 55378242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 259 - 324
Target Start/End: Original strand, 8043861 - 8043926
Alignment:
Q  259 tatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataat 324  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||    
T  8043861 tatttgcatttatgcaatcacaccaataattcatcaccacttgcataatcaatatcatatcataat 8043926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 542 - 655
Target Start/End: Complemental strand, 19699048 - 19698936
Alignment:
Q  542 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa-caactcaccatatcatcaccaatattttatttacatttatgcaatcacatc 640  Q
    |||||||||| |||||||  |||||||||||| |||||||||| |||| ||| |||||||||  |||||||||||  | || |||||||||||||||| |    
T  19699048 atgtatgcataaacatatatctcaacaacaatacatatgttcatacaaacaattcaccatattctcaccaatatt--acttgcatttatgcaatcacacc 19698951  T
Q  641 aataattcatcacca 655  Q
    |||||||||||||||    
T  19698950 aataattcatcacca 19698936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 542 - 655
Target Start/End: Complemental strand, 19709633 - 19709521
Alignment:
Q  542 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa-caactcaccatatcatcaccaatattttatttacatttatgcaatcacatc 640  Q
    |||||||||| |||||||  |||||||||||| |||||||||| |||| ||| |||||||||  |||||||||||  | || |||||||||||||||| |    
T  19709633 atgtatgcataaacatatatctcaacaacaatacatatgttcatacaaacaattcaccatattctcaccaatatt--acttgcatttatgcaatcacacc 19709536  T
Q  641 aataattcatcacca 655  Q
    |||||||||||||||    
T  19709535 aataattcatcacca 19709521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 502 - 599
Target Start/End: Complemental strand, 19699177 - 19699079
Alignment:
Q  502 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcacca 599  Q
    |||||| ||||||||||||| ||||| |||  || ||   |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  19699177 tcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatacatatgttcacacaaacaactcacca 19699079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 502 - 599
Target Start/End: Complemental strand, 19709762 - 19709664
Alignment:
Q  502 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcacca 599  Q
    |||||| ||||||||||||| ||||| |||  || ||   |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  19709762 tcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatacatatgttcacacaaacaactcacca 19709664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 607
Target Start/End: Original strand, 14570043 - 14570109
Alignment:
Q  542 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcaccatatcatca 607  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||| |||||||    
T  14570043 atgtatgcatgaacatatgactcaacaacaatgcatatgtccacacaaacaattcaccacatcatca 14570109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 141 - 258
Target Start/End: Original strand, 22737247 - 22737364
Alignment:
Q  141 atcatcaccaat-tggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactca 239  Q
    |||||||||||| |||||||||||| ||||| | || || ||   ||||||||||||||||||||||||| || ||||||||||| | ||||||||||||    
T  22737247 atcatcaccaatatggatatataaa-atatccgccaccatcaggcatgtatgcatgaacatatgactcaacaacaatgcatatgttcccacaacaactca 22737345  T
Q  240 ccatatcatcaccaatatt 258  Q
    ||||||   ||||||||||    
T  22737346 ccatattcacaccaatatt 22737364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 8043802 - 8043863
Alignment:
Q  129 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtat 190  Q
    ||||||| |||||||||||||||||||||||||||||||| | |||||||||||| ||||||    
T  8043802 atcatcatcaaaatcatcaccaattggatatataaacatacccgtcatcaccaaacatgtat 8043863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 486 - 547
Target Start/End: Original strand, 8043802 - 8043863
Alignment:
Q  486 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtat 547  Q
    ||||||| |||||||||||||||||||||||||||||||| | |||||||||||| ||||||    
T  8043802 atcatcatcaaaatcatcaccaattggatatataaacatacccgtcatcaccaaacatgtat 8043863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 19698944 - 19698892
Alignment:
Q  245 tcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcacca 297  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  19698944 tcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcacca 19698892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 19709529 - 19709477
Alignment:
Q  245 tcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcacca 297  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  19709529 tcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcacca 19709477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 146 - 242
Target Start/End: Complemental strand, 55378338 - 55378242
Alignment:
Q  146 caccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcacca 242  Q
    ||||| ||||||||||||| ||||| |||| || ||   |||||||||||||| |||||||||| || ||||||||||| ||||||| |||||||||    
T  55378338 caccatttggatatataaaaatatccgtcaccatcagtcatgtatgcatgaacgtatgactcaacaacaatgcatatgttcacacaataactcacca 55378242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 312 - 403
Target Start/End: Complemental strand, 55378011 - 55377920
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttgttcttattccaag 403  Q
    |||||||||||||||| ||||||||||||  ||||||||||||||||   |  |||||||||||||||| ||||||||| ||  ||||||||    
T  55378011 accatatcataataaataatgtatatggatccaccaatatcatcaccttcacataatttcacatcaaatacatgatttgctcacattccaag 55377920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 250
Target Start/End: Original strand, 14570043 - 14570109
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcaccatatcatca 250  Q
    ||||||||||||||||||||||||| || ||||||||||||||||| ||||| |||||| |||||||    
T  14570043 atgtatgcatgaacatatgactcaacaacaatgcatatgtccacacaaacaattcaccacatcatca 14570109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 541 - 616
Target Start/End: Complemental strand, 19082490 - 19082413
Alignment:
Q  541 tatgtatgcatgaacatatgactc-aacaacaatgcatatgttcacac-aacaactcaccatatcatcaccaatattt 616  Q
    |||||||||||||||||||| ||| |||||||| |||||||||||||| ||||| |||||| |||||||||| |||||    
T  19082490 tatgtatgcatgaacatatgcctcaaacaacaaagcatatgttcacacaaacaattcaccacatcatcaccagtattt 19082413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 297
Target Start/End: Complemental strand, 19699048 - 19698936
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaa-caactcaccatatcatcaccaatatttatttgcatttatgcaatcatacga 283  Q
    |||||||||| |||||||  ||||| || ||| ||||||| || |||| ||| |||||||||  ||||||||||| | ||||||||||||||||| || |    
T  19699048 atgtatgcataaacatatatctcaacaacaatacatatgttcatacaaacaattcaccatattctcaccaatatt-acttgcatttatgcaatcacacca 19698950  T
Q  284 ataattcatcacca 297  Q
    ||||||||||||||    
T  19698949 ataattcatcacca 19698936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 297
Target Start/End: Complemental strand, 19709633 - 19709521
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaa-caactcaccatatcatcaccaatatttatttgcatttatgcaatcatacga 283  Q
    |||||||||| |||||||  ||||| || ||| ||||||| || |||| ||| |||||||||  ||||||||||| | ||||||||||||||||| || |    
T  19709633 atgtatgcataaacatatatctcaacaacaatacatatgttcatacaaacaattcaccatattctcaccaatatt-acttgcatttatgcaatcacacca 19709535  T
Q  284 ataattcatcacca 297  Q
    ||||||||||||||    
T  19709534 ataattcatcacca 19709521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 546 - 589
Target Start/End: Complemental strand, 7966137 - 7966094
Alignment:
Q  546 atgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  7966137 atgcatgaacatatgactcgacaacaatgcatatgttcacacaa 7966094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 546 - 585
Target Start/End: Complemental strand, 12346732 - 12346693
Alignment:
Q  546 atgcatgaacatatgactcaacaacaatgcatatgttcac 585  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  12346732 atgcatgaacatatgactcaacaacaatgcatatgttcac 12346693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 546 - 589
Target Start/End: Complemental strand, 13448577 - 13448534
Alignment:
Q  546 atgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  13448577 atgcatgaacatatgactcgacaacaatgcatatgttcacacaa 13448534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 546 - 589
Target Start/End: Complemental strand, 40902253 - 40902210
Alignment:
Q  546 atgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  40902253 atgcatgaacatatgactcgacaacaatgcatatgttcacacaa 40902210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 546 - 589
Target Start/End: Complemental strand, 41918319 - 41918276
Alignment:
Q  546 atgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  41918319 atgcatgaacatatgactcgacaacaatgcatatgttcacacaa 41918276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 242
Target Start/End: Complemental strand, 19699177 - 19699079
Alignment:
Q  145 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 242  Q
    |||||| ||||||||||||| ||||| |||  || ||   ||||||||||||||||||||||||| || ||| ||||||| ||||| ||||||||||||    
T  19699177 tcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatacatatgttcacacaaacaactcacca 19699079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 242
Target Start/End: Complemental strand, 19709762 - 19709664
Alignment:
Q  145 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 242  Q
    |||||| ||||||||||||| ||||| |||  || ||   ||||||||||||||||||||||||| || ||| ||||||| ||||| ||||||||||||    
T  19709762 tcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatacatatgttcacacaaacaactcacca 19709664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 542 - 612
Target Start/End: Complemental strand, 19623566 - 19623495
Alignment:
Q  542 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacac--aacaactcaccatatcatcaccaat 612  Q
    |||||||||| |||||||||||| ||| ||||||||||||||||||  ||||| |||||| ||||||||||||    
T  19623566 atgtatgcatcaacatatgactcgaca-caatgcatatgttcacacaaaacaattcaccacatcatcaccaat 19623495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 602 - 655
Target Start/End: Complemental strand, 19698845 - 19698793
Alignment:
Q  602 tcatcaccaatattttatttacatttatgcaatcacatcaataattcatcacca 655  Q
    ||||||||||||||| |||| |||||||||||||||| ||||||||||||||||    
T  19698845 tcatcaccaatattt-atttgcatttatgcaatcacaccaataattcatcacca 19698793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 602 - 655
Target Start/End: Complemental strand, 19698944 - 19698892
Alignment:
Q  602 tcatcaccaatattttatttacatttatgcaatcacatcaataattcatcacca 655  Q
    ||||||||||||||| |||| |||||||||||||||| ||||||||||||||||    
T  19698944 tcatcaccaatattt-atttgcatttatgcaatcacaccaataattcatcacca 19698892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 602 - 655
Target Start/End: Complemental strand, 19709430 - 19709378
Alignment:
Q  602 tcatcaccaatattttatttacatttatgcaatcacatcaataattcatcacca 655  Q
    ||||||||||||||| |||| |||||||||||||||| ||||||||||||||||    
T  19709430 tcatcaccaatattt-atttgcatttatgcaatcacaccaataattcatcacca 19709378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 602 - 655
Target Start/End: Complemental strand, 19709529 - 19709477
Alignment:
Q  602 tcatcaccaatattttatttacatttatgcaatcacatcaataattcatcacca 655  Q
    ||||||||||||||| |||| |||||||||||||||| ||||||||||||||||    
T  19709529 tcatcaccaatattt-atttgcatttatgcaatcacaccaataattcatcacca 19709477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 312 - 356
Target Start/End: Original strand, 8043974 - 8044018
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatca 356  Q
    |||| |||||||||||||||||||||||| |||||||||||||||    
T  8043974 accacatcataataaacaatgtatatggattcaccaatatcatca 8044018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 546 - 585
Target Start/End: Complemental strand, 12336059 - 12336020
Alignment:
Q  546 atgcatgaacatatgactcaacaacaatgcatatgttcac 585  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  12336059 atgcatgaacatatgaatcaacaacaatgcatatgttcac 12336020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 542 - 589
Target Start/End: Complemental strand, 41918234 - 41918187
Alignment:
Q  542 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    |||||||||| |||||||  ||||||||||||||||||||||||||||    
T  41918234 atgtatgcataaacatatatctcaacaacaatgcatatgttcacacaa 41918187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 312 - 390
Target Start/End: Original strand, 14910986 - 14911064
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttg 390  Q
    |||| ||||||||||||||||||||| ||  ||||||||||||||||  ||  ||||||||||||| ||  ||||||||    
T  14910986 accaaatcataataaacaatgtatatcgatacaccaatatcatcacctttacataatttcacatcagatatatgatttg 14911064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 617 - 656
Target Start/End: Original strand, 8043861 - 8043900
Alignment:
Q  617 tatttacatttatgcaatcacatcaataattcatcaccac 656  Q
    ||||| |||||||||||||||| |||||||||||||||||    
T  8043861 tatttgcatttatgcaatcacaccaataattcatcaccac 8043900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 8373496 - 8373542
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcacc 358  Q
    |||||||||||||||  |||||||||||| ||||||| |||||||||    
T  8373496 accatatcataataaggaatgtatatggattcaccaaaatcatcacc 8373542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 19019455 - 19019501
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcacc 358  Q
    |||||||||||||||  |||||||||||| ||||||| |||||||||    
T  19019455 accatatcataataaggaatgtatatggattcaccaaaatcatcacc 19019501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 19082490 - 19082412
Alignment:
Q  184 tatgtatgcatgaacatatgactc-aataataatgcatatgtccacac-aacaactcaccatatcatcaccaatattta 260  Q
    |||||||||||||||||||| ||| || || || |||||||| ||||| ||||| |||||| |||||||||| ||||||    
T  19082490 tatgtatgcatgaacatatgcctcaaacaacaaagcatatgttcacacaaacaattcaccacatcatcaccagtattta 19082412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 546 - 587
Target Start/End: Original strand, 7848995 - 7849036
Alignment:
Q  546 atgcatgaacatatgactcaacaacaatgcatatgttcacac 587  Q
    |||||||| |||||||||| ||||||||| ||||||||||||    
T  7848995 atgcatgagcatatgactctacaacaatgtatatgttcacac 7849036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 694 - 735
Target Start/End: Complemental strand, 55377987 - 55377946
Alignment:
Q  694 atggattcaccaatatcatcaccttctcataatttcatatca 735  Q
    |||||| ||||||||||||||||||| |||||||||| ||||    
T  55377987 atggatccaccaatatcatcaccttcacataatttcacatca 55377946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 180; Significance: 8e-97; HSPs: 2)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 180; E-Value: 8e-97
Query Start/End: Original strand, 128 - 355
Target Start/End: Complemental strand, 2171 - 1946
Alignment:
Q  128 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 227  Q
    ||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2171 catcatcaccaaa-tcatcacaaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 2073  T
Q  228 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaa 327  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||| | | ||||||||||||||||||||||| ||    
T  2072 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcacacctataattcatcaccgcatacataatcaataccatatcataat-aa 1974  T
Q  328 caatgtatatggactcaccaatatcatc 355  Q
    ||||||||||||||||||||||||||||    
T  1973 caatgtatatggactcaccaatatcatc 1946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342; HSP #2
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 485 - 727
Target Start/End: Complemental strand, 2171 - 1932
Alignment:
Q  485 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttca 584  Q
    ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||| ||    
T  2171 catcatcaccaaa-tcatcacaaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 2073  T
Q  585 cacaacaactcaccatatcatcaccaatattttatttacatttatgcaatcacatcaataattcatcaccacgtatataatcatacatcatgtcataata 684  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||| | ||||||||||||| | || ||||||| | | ||| ||||||||    
T  2072 cacaacaactcaccatatcatcaccaata-tttatttgcatttatgcaatcacacctataattcatcaccgcatacataatca-ataccatatcataata 1975  T
Q  685 aacatacacatggattcaccaatatcatcaccttctcataatt 727  Q
    |  ||  | ||||| |||||||||||||| | ||| |||||||    
T  1974 acaatgtatatggactcaccaatatcatctcattcacataatt 1932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 173; Significance: 1e-92; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 128 - 355
Target Start/End: Original strand, 29664878 - 29665105
Alignment:
Q  128 catcatcaccaaaatcatcaccaat-tggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcc 226  Q
    ||||||||||||||||||||||||| |||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29664878 catcatcaccaaaatcatcaccaatatggatacataaaaatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcc 29664977  T
Q  227 acacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataa 326  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| | |||||||||||| |||||||||| |    
T  29664978 acacaacaactctccatatcatcaccaatatttatttgcatttatgcaatcacacaaataattcatcaccacatacataatcaatactatatcataat-a 29665076  T
Q  327 acaatgtatatggactcaccaatatcatc 355  Q
    ||||||||| |||||||||||||||||||    
T  29665077 acaatgtatgtggactcaccaatatcatc 29665105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 128 - 355
Target Start/End: Complemental strand, 32278119 - 32277893
Alignment:
Q  128 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 227  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32278119 catcatcaccaatatcatcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 32278020  T
Q  228 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaa 327  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||| |  |||||||||||||||| | ||||||||||| ||||||||||| ||    
T  32278019 cacaaccactcaccaaatcatcaccaatatttatttgcatttatgcaatcacatcaataattcatcaccacatacataatcaatatcatatcataat-aa 32277921  T
Q  328 caatgtatatggactcaccaatatcatc 355  Q
    ||||||||| ||||||||||||| ||||    
T  32277920 caatgtatacggactcaccaataccatc 32277893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 485 - 685
Target Start/End: Complemental strand, 32278119 - 32277921
Alignment:
Q  485 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttca 584  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||| ||    
T  32278119 catcatcaccaatatcatcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 32278020  T
Q  585 cacaacaactcaccatatcatcaccaatattttatttacatttatgcaatcacatcaataattcatcaccacgtatataatcatacatcatgtcataata 684  Q
    |||||| |||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| || ||||||| | ||||| ||||||||    
T  32278019 cacaaccactcaccaaatcatcaccaata-tttatttgcatttatgcaatcacatcaataattcatcaccacatacataatca-atatcatatcataata 32277922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 485 - 667
Target Start/End: Original strand, 29664878 - 29665060
Alignment:
Q  485 catcatcaccaaaatcatcaccaat-tggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttc 583  Q
    ||||||||||||||||||||||||| |||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||| |    
T  29664878 catcatcaccaaaatcatcaccaatatggatacataaaaatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcc 29664977  T
Q  584 acacaacaactcaccatatcatcaccaatattttatttacatttatgcaatcacatcaataattcatcaccacgtatataatca 667  Q
    |||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||  |||||||||||||||| || |||||||    
T  29664978 acacaacaactctccatatcatcaccaata-tttatttgcatttatgcaatcacacaaataattcatcaccacatacataatca 29665060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 185 - 355
Target Start/End: Original strand, 19628056 - 19628224
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaa-caactcaccatatcatcaccaatatttatttgcatttatgcaatcatacga 283  Q
    |||||||||| |||||||  ||||| || ||| ||||||| || |||| ||| |||||||||  ||||||||||| | ||||||||||||||||| || |    
T  19628056 atgtatgcataaacatatatctcaacaacaatacatatgttcatacaaacaattcaccatattctcaccaatatt-acttgcatttatgcaatcacacca 19628154  T
Q  284 ataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcaccaatatcatc 355  Q
    |||||||||||||| |  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  19628155 ataattcatcaccaata-cataatcaataccatatcataataa-caatgtatatggactcaccaatatcatc 19628224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 245 - 403
Target Start/End: Complemental strand, 16301385 - 16301225
Alignment:
Q  245 tcatcacca-atatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaatacc--atatcataataaacaatgtatatggac 341  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||||||||||| | |||||||||||||  ||||||| || |||||||||||| |||    
T  16301385 tcatcaccacatatttatttgcatttatgcaatcacaccaataattcatcaccacatacataatcaataccaaatatcat-attaacaatgtatatagac 16301287  T
Q  342 tcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttgttcttattccaag 403  Q
    |||||||||||||||||   |  |||||||||||||| | ||||||||| ||  ||||||||    
T  16301286 tcaccaatatcatcaccttcacataatttcacatcaattacatgatttgctcacattccaag 16301225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 542 - 615
Target Start/End: Original strand, 27739744 - 27739817
Alignment:
Q  542 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatatcatcaccaatatt 615  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  27739744 atgtatgcatgaacatatgactcaataacaatgcatatgttcacacaacaactcaccatatcctcaccaatatt 27739817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 489 - 655
Target Start/End: Complemental strand, 16301583 - 16301421
Alignment:
Q  489 atcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcacaca 588  Q
    |||||||| |||||||||| ||||||||||||| ||||| |||  || ||   || |||||||||| |||||||||||||||   ||||||||||||| |    
T  16301583 atcaccaatatcatcaccatttggatatataaaaatatccgtctccatcagtcatatatgcatgaatatatgactcaacaac---gcatatgttcacata 16301487  T
Q  589 acaactcaccatatcatcaccaatattttatttacatttatgcaatcacatcaataattcatcacca 655  Q
    ||||||||||| ||  |||| |||||||  ||| |||||||||||||||| ||||||||||||||||    
T  16301486 acaactcaccaaattctcacaaatatttg-tttgcatttatgcaatcacaccaataattcatcacca 16301421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 185 - 258
Target Start/End: Original strand, 27739744 - 27739817
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaatatt 258  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||    
T  27739744 atgtatgcatgaacatatgactcaataacaatgcatatgttcacacaacaactcaccatatcctcaccaatatt 27739817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 502 - 602
Target Start/End: Complemental strand, 35010881 - 35010780
Alignment:
Q  502 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcaccat 600  Q
    |||||| ||||||||||||| |||||||||  || ||   |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  35010881 tcaccatttggatatataaaaatatctgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcaccat 35010782  T
Q  601 at 602  Q
    ||    
T  35010781 at 35010780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 132 - 297
Target Start/End: Complemental strand, 16301583 - 16301421
Alignment:
Q  132 atcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacaca 231  Q
    |||||||| |||||||||| ||||||||||||| ||||| |||  || ||   || |||||||||| ||||||||||| ||    |||||||| |||| |    
T  16301583 atcaccaatatcatcaccatttggatatataaaaatatccgtctccatcagtcatatatgcatgaatatatgactcaacaac---gcatatgttcacata 16301487  T
Q  232 acaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcacca 297  Q
    ||||||||||| ||  |||| ||||||| |||||||||||||||||| || |||||||||||||||    
T  16301486 acaactcaccaaattctcacaaatatttgtttgcatttatgcaatcacaccaataattcatcacca 16301421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 542 - 611
Target Start/End: Original strand, 14151202 - 14151272
Alignment:
Q  542 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcaccatatcatcaccaa 611  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||    
T  14151202 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcaccatattctcaccaa 14151272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 542 - 655
Target Start/End: Original strand, 19628056 - 19628168
Alignment:
Q  542 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa-caactcaccatatcatcaccaatattttatttacatttatgcaatcacatc 640  Q
    |||||||||| |||||||  |||||||||||| |||||||||| |||| ||| |||||||||  |||||||||||  | || |||||||||||||||| |    
T  19628056 atgtatgcataaacatatatctcaacaacaatacatatgttcatacaaacaattcaccatattctcaccaatatt--acttgcatttatgcaatcacacc 19628153  T
Q  641 aataattcatcacca 655  Q
    |||||||||||||||    
T  19628154 aataattcatcacca 19628168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 145 - 245
Target Start/End: Complemental strand, 35010881 - 35010780
Alignment:
Q  145 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcaccat 243  Q
    |||||| ||||||||||||| |||||||||  || ||   ||||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||    
T  35010881 tcaccatttggatatataaaaatatctgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcaccat 35010782  T
Q  244 at 245  Q
    ||    
T  35010781 at 35010780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 312 - 390
Target Start/End: Complemental strand, 14627327 - 14627249
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttg 390  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||   |  |||||||||||||||| |||||||||    
T  14627327 accatatcataataaacaatatatatggattcaccaatatcatcaccttcacataatttcacatcaaatacatgatttg 14627249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 312 - 390
Target Start/End: Original strand, 27739899 - 27739977
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttg 390  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||   |  |||||||||||||||| |||||||||    
T  27739899 accatattataataaacaatgtatatggattcaccaatatcatcaccttcacataatttcacatcaaatacatgatttg 27739977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 312 - 390
Target Start/End: Complemental strand, 35010591 - 35010513
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttg 390  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||   |  |||||||||||||||| |||||||||    
T  35010591 accatatcataataaacaatgtatatggattcaccaatatcattaccttcacataatttcacatcaaatacatgatttg 35010513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 245 - 298
Target Start/End: Complemental strand, 16301429 - 16301376
Alignment:
Q  245 tcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccac 298  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  16301429 tcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcaccac 16301376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 312 - 391
Target Start/End: Original strand, 222009 - 222088
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttgt 391  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||  ||  ||||||||||||| ||  |||||||||    
T  222009 accatatcataataaacaatgtatatggattcaccaacatcatcacctttacataatttcacatcagatatatgatttgt 222088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 254
Target Start/End: Original strand, 14151202 - 14151272
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcaccatatcatcaccaa 254  Q
    ||||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||||  |||||||    
T  14151202 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcaccatattctcaccaa 14151272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 502 - 599
Target Start/End: Original strand, 19627927 - 19628025
Alignment:
Q  502 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcacca 599  Q
    |||||| ||||||||||||| ||||| |||  || ||   || ||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||    
T  19627927 tcaccatttggatatataaaaatatccgtctccatcagtcatatatgcatgaacatatgacttaacaacaatacatatgttcacacaaacaactcacca 19628025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 615 - 735
Target Start/End: Complemental strand, 16301372 - 16301251
Alignment:
Q  615 tttatttacatttatgcaatcacatcaataattcatcaccacgtatataatc-atacatcatgtcataataaacatacacatggattcaccaatatcatc 713  Q
    ||||||| |||||||||||||||| ||||||||||||||||| || |||||| ||||   || ||||| |||  ||  | || || ||||||||||||||    
T  16301372 tttatttgcatttatgcaatcacaccaataattcatcaccacatacataatcaataccaaatatcatattaacaatgtatatagactcaccaatatcatc 16301273  T
Q  714 accttctcataatttcatatca 735  Q
    |||||| |||||||||| ||||    
T  16301272 accttcacataatttcacatca 16301251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 546 - 589
Target Start/End: Complemental strand, 940692 - 940649
Alignment:
Q  546 atgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  940692 atgcatgaacatatgactcgacaacaatgcatatgttcacacaa 940649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 312 - 403
Target Start/End: Original strand, 1554902 - 1554993
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttgttcttattccaag 403  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||   |  |||||||||||||  | ||||||||| ||  ||||||||    
T  1554902 accatatcataataaacaatgtatatggattcaccaaaatcatcaccttcacataatttcacatcacttacatgatttgctcacattccaag 1554993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 542 - 589
Target Start/End: Complemental strand, 17084712 - 17084665
Alignment:
Q  542 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||    
T  17084712 atgtatgcataaacatatgtctcaacaacaatgcatatgttcacacaa 17084665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 546 - 589
Target Start/End: Complemental strand, 17084886 - 17084843
Alignment:
Q  546 atgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  17084886 atgcatgaacatatgactcgacaacaatgcatatgttcacacaa 17084843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 602 - 656
Target Start/End: Complemental strand, 16301429 - 16301376
Alignment:
Q  602 tcatcaccaatattttatttacatttatgcaatcacatcaataattcatcaccac 656  Q
    ||||||||||||||| |||| |||||||||||||||| |||||||||||||||||    
T  16301429 tcatcaccaatattt-atttgcatttatgcaatcacaccaataattcatcaccac 16301376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 677 - 735
Target Start/End: Complemental strand, 14627321 - 14627262
Alignment:
Q  677 tcataataaaca-tacacatggattcaccaatatcatcaccttctcataatttcatatca 735  Q
    |||||||||||| || | |||||||||||||||||||||||||| |||||||||| ||||    
T  14627321 tcataataaacaatatatatggattcaccaatatcatcaccttcacataatttcacatca 14627262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 546 - 589
Target Start/End: Original strand, 19671116 - 19671159
Alignment:
Q  546 atgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    |||||||||||||| |||| ||||||||||||||||||||||||    
T  19671116 atgcatgaacatataactcgacaacaatgcatatgttcacacaa 19671159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 546 - 589
Target Start/End: Complemental strand, 22595027 - 22594984
Alignment:
Q  546 atgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||    
T  22595027 atgcatgaacatatgactcgacaacaatgcatatgtttacacaa 22594984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 542 - 615
Target Start/End: Complemental strand, 35010752 - 35010678
Alignment:
Q  542 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcaccatatcatcaccaatatt 615  Q
    |||||||||| |||||||  |||||||||||| |||||||||| || ||||| |||||||||  |||||||||||    
T  35010752 atgtatgcataaacatatatctcaacaacaatacatatgttcatacaaacaattcaccatattctcaccaatatt 35010678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 694 - 735
Target Start/End: Original strand, 27739923 - 27739964
Alignment:
Q  694 atggattcaccaatatcatcaccttctcataatttcatatca 735  Q
    |||||||||||||||||||||||||| |||||||||| ||||    
T  27739923 atggattcaccaatatcatcaccttcacataatttcacatca 27739964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 525 - 589
Target Start/End: Complemental strand, 31469097 - 31469033
Alignment:
Q  525 atctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    |||||||| || |||  ||| ||||||||||||||||||| |||||||||  |||||||||||||    
T  31469097 atctgtcaccatcaatcatgaatgcatgaacatatgactcgacaacaatgtctatgttcacacaa 31469033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 542 - 589
Target Start/End: Complemental strand, 22594942 - 22594895
Alignment:
Q  542 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    |||||||||| ||||| || |||||||||| |||||||||||||||||    
T  22594942 atgtatgcataaacatttgtctcaacaacattgcatatgttcacacaa 22594895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 242
Target Start/End: Original strand, 19627927 - 19628025
Alignment:
Q  145 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 242  Q
    |||||| ||||||||||||| ||||| |||  || ||   || ||||||||||||||||||| || || ||| ||||||| ||||| ||||||||||||    
T  19627927 tcaccatttggatatataaaaatatccgtctccatcagtcatatatgcatgaacatatgacttaacaacaatacatatgttcacacaaacaactcacca 19628025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 694 - 735
Target Start/End: Original strand, 1554926 - 1554967
Alignment:
Q  694 atggattcaccaatatcatcaccttctcataatttcatatca 735  Q
    ||||||||||||| |||||||||||| |||||||||| ||||    
T  1554926 atggattcaccaaaatcatcaccttcacataatttcacatca 1554967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 694 - 735
Target Start/End: Complemental strand, 35010567 - 35010526
Alignment:
Q  694 atggattcaccaatatcatcaccttctcataatttcatatca 735  Q
    ||||||||||||||||||| |||||| |||||||||| ||||    
T  35010567 atggattcaccaatatcattaccttcacataatttcacatca 35010526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 171; Significance: 2e-91; HSPs: 4)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 498 - 735
Target Start/End: Complemental strand, 35322 - 35085
Alignment:
Q  498 atcatcaccaat-tggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactca 596  Q
    |||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35322 atcatcaccaatatggatatataaacatatccgtcatcaccaattatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactca 35223  T
Q  597 ccatatcatcaccaatattttatttacatttatgcaatcacatcaataattcatcaccacgtatataatcatacatcatgtcataataaacatacacatg 696  Q
    | |||||||||||||||  |||||| ||||||||||||| || |||||||||||||||||||||||||||||||| ||| ||||||  |||||||| |||    
T  35222 ctatatcatcaccaata-attatttgcatttatgcaatcgcaccaataattcatcaccacgtatataatcatacaccatatcataaataacatacatatg 35124  T
Q  697 gattcaccaatatcatcaccttctcataatttcatatca 735  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  35123 gattcaccaatatcatcaccttctcataatttcctatca 35085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 141 - 358
Target Start/End: Complemental strand, 35322 - 35104
Alignment:
Q  141 atcatcaccaat-tggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactca 239  Q
    |||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| || ||||||||||| ||||||||||||||    
T  35322 atcatcaccaatatggatatataaacatatccgtcatcaccaattatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactca 35223  T
Q  240 ccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatca-ataccatatcataataaacaatgtatatg 338  Q
    | ||||||||||||||| ||||||||||||||||||||  || |||||||||||||||| |  ||||||| | ||||||||||||  ||| ||  |||||    
T  35222 ctatatcatcaccaataattatttgcatttatgcaatcgcaccaataattcatcaccacgtatataatcatacaccatatcataaataac-atacatatg 35124  T
Q  339 gactcaccaatatcatcacc 358  Q
    || |||||||||||||||||    
T  35123 gattcaccaatatcatcacc 35104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 312 - 390
Target Start/End: Complemental strand, 223368 - 223290
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttg 390  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||  ||  ||||||||||||| ||  ||||||||    
T  223368 accatatcataataaacaatgtatatggattcaccaatatcatcacctttacataatttcacatcagatatatgatttg 223290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #4
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 694 - 736
Target Start/End: Complemental strand, 223344 - 223302
Alignment:
Q  694 atggattcaccaatatcatcaccttctcataatttcatatcag 736  Q
    |||||||||||||||||||||||||  |||||||||| |||||    
T  223344 atggattcaccaatatcatcacctttacataatttcacatcag 223302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 171; Significance: 2e-91; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 128 - 355
Target Start/End: Complemental strand, 21495809 - 21495581
Alignment:
Q  128 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 227  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  21495809 catcatcaccaaaatcatcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcta 21495710  T
Q  228 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaata--ccatatcataata 325  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||| |  ||||||||||   |||||||| ||     
T  21495709 cacaacaactcaccaaatcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcaccacatatataatcaataatacatatcat-att 21495611  T
Q  326 aacaatgtatatggactcaccaatatcatc 355  Q
    ||||||||||||||||||||||||||||||    
T  21495610 aacaatgtatatggactcaccaatatcatc 21495581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 128 - 297
Target Start/End: Complemental strand, 16041135 - 16040966
Alignment:
Q  128 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 227  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16041135 catcatcaccaaaatcatcgccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 16041036  T
Q  228 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcacca 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  16041035 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcacca 16040966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 128 - 297
Target Start/End: Complemental strand, 16042811 - 16042642
Alignment:
Q  128 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 227  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16042811 catcatcaccaaaatcatcgccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 16042712  T
Q  228 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcacca 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  16042711 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcacca 16042642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 128 - 297
Target Start/End: Original strand, 22885125 - 22885294
Alignment:
Q  128 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 227  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  22885125 catcatcaccaaaatcatcaccaattggatatataaacatatttgtcatcaccaaatatgcatgcatgaacatatgactcaataataatgcatatgtcca 22885224  T
Q  228 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcacca 297  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||| ||||||||    
T  22885225 cacaacaactcaccaaatcatcaccaatatttatttgcatttatgcaatcacaccaataatccatcacca 22885294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 485 - 667
Target Start/End: Complemental strand, 21495809 - 21495628
Alignment:
Q  485 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttca 584  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||  |    
T  21495809 catcatcaccaaaatcatcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcta 21495710  T
Q  585 cacaacaactcaccatatcatcaccaatattttatttacatttatgcaatcacatcaataattcatcaccacgtatataatca 667  Q
    ||||||||||||||| ||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| ||||||||||    
T  21495709 cacaacaactcaccaaatcatcaccaata-tttatttgcatttatgcaatcacaccaataattcatcaccacatatataatca 21495628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 485 - 655
Target Start/End: Complemental strand, 16041135 - 16040966
Alignment:
Q  485 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttca 584  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||| ||    
T  16041135 catcatcaccaaaatcatcgccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 16041036  T
Q  585 cacaacaactcaccatatcatcaccaatattttatttacatttatgcaatcacatcaataattcatcacca 655  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||    
T  16041035 cacaacaactcaccatatcatcaccaata-tttatttgcatttatgcaatcacaccaataattcatcacca 16040966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 485 - 655
Target Start/End: Complemental strand, 16042811 - 16042642
Alignment:
Q  485 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttca 584  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||| ||    
T  16042811 catcatcaccaaaatcatcgccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 16042712  T
Q  585 cacaacaactcaccatatcatcaccaatattttatttacatttatgcaatcacatcaataattcatcacca 655  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||    
T  16042711 cacaacaactcaccatatcatcaccaata-tttatttgcatttatgcaatcacaccaataattcatcacca 16042642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 485 - 655
Target Start/End: Original strand, 22885125 - 22885294
Alignment:
Q  485 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttca 584  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| || ||||||||||| ||    
T  22885125 catcatcaccaaaatcatcaccaattggatatataaacatatttgtcatcaccaaatatgcatgcatgaacatatgactcaataataatgcatatgtcca 22885224  T
Q  585 cacaacaactcaccatatcatcaccaatattttatttacatttatgcaatcacatcaataattcatcacca 655  Q
    ||||||||||||||| ||||||||||||| ||||||| |||||||||||||||| ||||||| ||||||||    
T  22885225 cacaacaactcaccaaatcatcaccaata-tttatttgcatttatgcaatcacaccaataatccatcacca 22885294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 245 - 355
Target Start/End: Original strand, 18611189 - 18611297
Alignment:
Q  245 tcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactca 344  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||  | ||||||||||||||||||||||| |||||||||||||||||||    
T  18611189 tcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcacca-atacataatcaataccatatcataat-aacaatgtatatggactca 18611286  T
Q  345 ccaatatcatc 355  Q
    |||||||||||    
T  18611287 ccaatatcatc 18611297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 283 - 355
Target Start/End: Complemental strand, 16040922 - 16040850
Alignment:
Q  283 aataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcaccaatatcatc 355  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16040922 aatatttcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcaccaatatcatc 16040850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 283 - 355
Target Start/End: Complemental strand, 16042598 - 16042526
Alignment:
Q  283 aataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcaccaatatcatc 355  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16042598 aatatttcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcaccaatatcatc 16042526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 246 - 354
Target Start/End: Original strand, 22885331 - 22885438
Alignment:
Q  246 catcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcac 345  Q
    |||||| |||||||||||||||||||||||||| || |||||||||||| |||   | ||||||||||||||||| ||| ||||||||||||||||||||    
T  22885331 catcactaatatttatttgcatttatgcaatcacaccaataattcatcatcacacacttaatcaataccatatcacaat-aacaatgtatatggactcac 22885429  T
Q  346 caatatcat 354  Q
    |||||||||    
T  22885430 caatatcat 22885438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 502 - 599
Target Start/End: Complemental strand, 41508665 - 41508567
Alignment:
Q  502 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcacca 599  Q
    |||||| ||||||||||||| |||||||||  || ||   |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  41508665 tcaccatttggatatataaaaatatctgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 41508567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 542 - 655
Target Start/End: Original strand, 18610986 - 18611098
Alignment:
Q  542 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa-caactcaccatatcatcaccaatattttatttacatttatgcaatcacatc 640  Q
    |||||||||| |||||||  |||||||||||| |||||||||| |||| ||| |||||||||  |||||||||||  | || |||||||||||||||| |    
T  18610986 atgtatgcataaacatatatctcaacaacaatacatatgttcatacaaacaattcaccatattctcaccaatatt--acttgcatttatgcaatcacacc 18611083  T
Q  641 aataattcatcacca 655  Q
    |||||||||||||||    
T  18611084 aataattcatcacca 18611098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 542 - 655
Target Start/End: Original strand, 18617780 - 18617892
Alignment:
Q  542 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa-caactcaccatatcatcaccaatattttatttacatttatgcaatcacatc 640  Q
    |||||||||| |||||||  |||||||||||| |||||||||| |||| ||| |||||||||  |||||||||||  | || |||||||||||||||| |    
T  18617780 atgtatgcataaacatatatctcaacaacaatacatatgttcatacaaacaattcaccatattctcaccaatatt--acttgcatttatgcaatcacacc 18617877  T
Q  641 aataattcatcacca 655  Q
    |||||||||||||||    
T  18617878 aataattcatcacca 18617892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 502 - 599
Target Start/End: Original strand, 18610857 - 18610955
Alignment:
Q  502 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcacca 599  Q
    |||||| ||||||||||||| ||||| |||  || ||   |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  18610857 tcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatacatatgttcacacaaacaactcacca 18610955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 312 - 389
Target Start/End: Complemental strand, 41508336 - 41508259
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgattt 389  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||   |  |||||||||||||| ||||||||||    
T  41508336 accatatcataataaacaatgtatatggattcaccaatatcatcaccttcacataatttcacatcaattgcatgattt 41508259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 185 - 355
Target Start/End: Original strand, 18617780 - 18617962
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaa-caactcaccatatcatcaccaatatttatttgcatttatgcaatcatacga 283  Q
    |||||||||| |||||||  ||||| || ||| ||||||| || |||| ||| |||||||||  ||||||||||| | ||||||||||||||||| || |    
T  18617780 atgtatgcataaacatatatctcaacaacaatacatatgttcatacaaacaattcaccatattctcaccaatatt-acttgcatttatgcaatcacacca 18617878  T
Q  284 ataattcatcaccact-------------tgcataatcaataccatatcataataaacaatgtatatggactcaccaatatcatc 355  Q
    |||||||||||||| |             | ||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  18617879 ataattcatcaccaatatcatcaccaatatacataatcaataccatatcataat-aacaatatatatggactcaccaatatcatc 18617962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 145 - 242
Target Start/End: Complemental strand, 41508665 - 41508567
Alignment:
Q  145 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 242  Q
    |||||| ||||||||||||| |||||||||  || ||   ||||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||    
T  41508665 tcaccatttggatatataaaaatatctgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 41508567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 245 - 297
Target Start/End: Original strand, 18611090 - 18611142
Alignment:
Q  245 tcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcacca 297  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  18611090 tcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcacca 18611142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 542 - 599
Target Start/End: Original strand, 18617691 - 18617749
Alignment:
Q  542 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcacca 599  Q
    ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||    
T  18617691 atgtatgcatgaacatatgactcaacaacaatatatatgttcacacaaacaactcacca 18617749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 297
Target Start/End: Original strand, 18610986 - 18611098
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaa-caactcaccatatcatcaccaatatttatttgcatttatgcaatcatacga 283  Q
    |||||||||| |||||||  ||||| || ||| ||||||| || |||| ||| |||||||||  ||||||||||| | ||||||||||||||||| || |    
T  18610986 atgtatgcataaacatatatctcaacaacaatacatatgttcatacaaacaattcaccatattctcaccaatatt-acttgcatttatgcaatcacacca 18611084  T
Q  284 ataattcatcacca 297  Q
    ||||||||||||||    
T  18611085 ataattcatcacca 18611098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 546 - 589
Target Start/End: Original strand, 17500655 - 17500698
Alignment:
Q  546 atgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  17500655 atgcatgaacatatgactcgacaacaatgcatatgttcacacaa 17500698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 542 - 589
Target Start/End: Complemental strand, 20177482 - 20177435
Alignment:
Q  542 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||    
T  20177482 atgtatgcataaacatatgtctcaacaacaatgcatatgttcacacaa 20177435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 546 - 589
Target Start/End: Complemental strand, 20177567 - 20177524
Alignment:
Q  546 atgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  20177567 atgcatgaacatatgactcgacaacaatgcatatgttcacacaa 20177524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 542 - 589
Target Start/End: Complemental strand, 20222209 - 20222162
Alignment:
Q  542 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||    
T  20222209 atgtatgcataaacatatgtctcaacaacaatgcatatgttcacacaa 20222162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 546 - 589
Target Start/End: Complemental strand, 20222294 - 20222251
Alignment:
Q  546 atgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  20222294 atgcatgaacatatgactcgacaacaatgcatatgttcacacaa 20222251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 242
Target Start/End: Original strand, 18610857 - 18610955
Alignment:
Q  145 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 242  Q
    |||||| ||||||||||||| ||||| |||  || ||   ||||||||||||||||||||||||| || ||| ||||||| ||||| ||||||||||||    
T  18610857 tcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatacatatgttcacacaaacaactcacca 18610955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 602 - 655
Target Start/End: Original strand, 18611090 - 18611142
Alignment:
Q  602 tcatcaccaatattttatttacatttatgcaatcacatcaataattcatcacca 655  Q
    ||||||||||||||| |||| |||||||||||||||| ||||||||||||||||    
T  18611090 tcatcaccaatattt-atttgcatttatgcaatcacaccaataattcatcacca 18611142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 602 - 655
Target Start/End: Original strand, 18611189 - 18611241
Alignment:
Q  602 tcatcaccaatattttatttacatttatgcaatcacatcaataattcatcacca 655  Q
    ||||||||||||||| |||| |||||||||||||||| ||||||||||||||||    
T  18611189 tcatcaccaatattt-atttgcatttatgcaatcacaccaataattcatcacca 18611241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 246 - 295
Target Start/End: Original strand, 22885287 - 22885336
Alignment:
Q  246 catcaccaatatttatttgcatttatgcaatcatacgaataattcatcac 295  Q
    ||||||||||||||||||||||||||||||||| || |||||| ||||||    
T  22885287 catcaccaatatttatttgcatttatgcaatcacaccaataatccatcac 22885336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 589
Target Start/End: Original strand, 16000793 - 16000837
Alignment:
Q  546 atgcatgaacatatgactcaacaac-aatgcatatgttcacacaa 589  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  16000793 atgcatgaacatatgactcaacaacaaatgcatatgttcacacaa 16000837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 546 - 589
Target Start/End: Complemental strand, 18262951 - 18262908
Alignment:
Q  546 atgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    ||||||||||||||||||| |||||||| |||||||||||||||    
T  18262951 atgcatgaacatatgactcgacaacaatacatatgttcacacaa 18262908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 18618205 - 18618251
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcacc 358  Q
    ||||||||||||||||||||||||||||| |||| || |||||||||    
T  18618205 accatatcataataaacaatgtatatggattcacaaaaatcatcacc 18618251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 542 - 615
Target Start/End: Complemental strand, 41508536 - 41508462
Alignment:
Q  542 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcaccatatcatcaccaatatt 615  Q
    |||||||||| |||||||  |||||||||||| |||||||||| || ||||| |||||||||  |||||||||||    
T  41508536 atgtatgcataaacatatatctcaacaacaatacatatgttcatacaaacaattcaccatattctcaccaatatt 41508462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 546 - 588
Target Start/End: Complemental strand, 45468802 - 45468760
Alignment:
Q  546 atgcatgaacatatgactcaacaacaatgcatatgttcacaca 588  Q
    ||||||||||||||||||| ||||||||||||||||| |||||    
T  45468802 atgcatgaacatatgactcgacaacaatgcatatgtttacaca 45468760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 602 - 655
Target Start/End: Complemental strand, 16040974 - 16040922
Alignment:
Q  602 tcatcaccaatattttatttacatttatgcaatcacatcaataattcatcacca 655  Q
    |||||||||||| || |||| |||||||||||||||| ||||||||||||||||    
T  16040974 tcatcaccaataatt-attttcatttatgcaatcacaccaataattcatcacca 16040922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 602 - 655
Target Start/End: Complemental strand, 16042650 - 16042598
Alignment:
Q  602 tcatcaccaatattttatttacatttatgcaatcacatcaataattcatcacca 655  Q
    |||||||||||| || |||| |||||||||||||||| ||||||||||||||||    
T  16042650 tcatcaccaataatt-attttcatttatgcaatcacaccaataattcatcacca 16042598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 694 - 735
Target Start/End: Complemental strand, 41508312 - 41508271
Alignment:
Q  694 atggattcaccaatatcatcaccttctcataatttcatatca 735  Q
    |||||||||||||||||||||||||| |||||||||| ||||    
T  41508312 atggattcaccaatatcatcaccttcacataatttcacatca 41508271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 546 - 589
Target Start/End: Original strand, 20708425 - 20708469
Alignment:
Q  546 atgcatgaacatatgactcaacaac-aatgcatatgttcacacaa 589  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||    
T  20708425 atgcatgaacacatgactcaacaacaaatgcatatgttcacacaa 20708469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 242
Target Start/End: Original strand, 18617691 - 18617749
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 242  Q
    ||||||||||||||||||||||||| || |||  |||||| ||||| ||||||||||||    
T  18617691 atgtatgcatgaacatatgactcaacaacaatatatatgttcacacaaacaactcacca 18617749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 603 - 653
Target Start/End: Original strand, 22885287 - 22885336
Alignment:
Q  603 catcaccaatattttatttacatttatgcaatcacatcaataattcatcac 653  Q
    |||||||||||||| |||| |||||||||||||||| ||||||| ||||||    
T  22885287 catcaccaatattt-atttgcatttatgcaatcacaccaataatccatcac 22885336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 615 - 652
Target Start/End: Original strand, 22885342 - 22885379
Alignment:
Q  615 tttatttacatttatgcaatcacatcaataattcatca 652  Q
    ||||||| |||||||||||||||| |||||||||||||    
T  22885342 tttatttgcatttatgcaatcacaccaataattcatca 22885379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 159; Significance: 3e-84; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 485 - 671
Target Start/End: Complemental strand, 58029 - 57844
Alignment:
Q  485 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttca 584  Q
    ||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  58029 catcatcaccaaa-tcagcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcattaacatatgactcaacaacaatgcatatgttca 57931  T
Q  585 cacaacaactcaccatatcatcaccaatattttatttacatttatgcaatcacatcaataattcatcaccacgtatataatcataca 671  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  57930 cacaacaactcaccatatcatcaccaatattttatttgcatttatgcaatcacaccaataattcatcaccacgtatataatcataca 57844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 128 - 298
Target Start/End: Complemental strand, 58029 - 57859
Alignment:
Q  128 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 227  Q
    ||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || ||||||||||| ||    
T  58029 catcatcaccaaa-tcagcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcattaacatatgactcaacaacaatgcatatgttca 57931  T
Q  228 cacaacaactcaccatatcatcaccaata-tttatttgcatttatgcaatcatacgaataattcatcaccac 298  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||    
T  57930 cacaacaactcaccatatcatcaccaatattttatttgcatttatgcaatcacaccaataattcatcaccac 57859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 158; Significance: 1e-83; HSPs: 6)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 128 - 297
Target Start/End: Original strand, 44727 - 44896
Alignment:
Q  128 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 227  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44727 catcatcaccaaaatcatcaccaattggatatataaacataactgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 44826  T
Q  228 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcacca 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  44827 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcacca 44896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 128 - 297
Target Start/End: Original strand, 52923 - 53092
Alignment:
Q  128 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 227  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52923 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 53022  T
Q  228 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcacca 297  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  53023 cacaacaactcaccaaatcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcacca 53092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #3
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 485 - 655
Target Start/End: Original strand, 44727 - 44896
Alignment:
Q  485 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttca 584  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||    
T  44727 catcatcaccaaaatcatcaccaattggatatataaacataactgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 44826  T
Q  585 cacaacaactcaccatatcatcaccaatattttatttacatttatgcaatcacatcaataattcatcacca 655  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||    
T  44827 cacaacaactcaccatatcatcaccaata-tttatttgcatttatgcaatcacaccaataattcatcacca 44896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #4
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 485 - 655
Target Start/End: Original strand, 52923 - 53092
Alignment:
Q  485 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttca 584  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||    
T  52923 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 53022  T
Q  585 cacaacaactcaccatatcatcaccaatattttatttacatttatgcaatcacatcaataattcatcacca 655  Q
    ||||||||||||||| ||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||    
T  53023 cacaacaactcaccaaatcatcaccaata-tttatttgcatttatgcaatcacaccaataattcatcacca 53092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 245 - 298
Target Start/End: Original strand, 53084 - 53137
Alignment:
Q  245 tcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccac 298  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  53084 tcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcaccac 53137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 602 - 656
Target Start/End: Original strand, 53084 - 53137
Alignment:
Q  602 tcatcaccaatattttatttacatttatgcaatcacatcaataattcatcaccac 656  Q
    ||||||||||||||| |||| |||||||||||||||| |||||||||||||||||    
T  53084 tcatcaccaatattt-atttgcatttatgcaatcacaccaataattcatcaccac 53137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 155; Significance: 7e-82; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 128 - 355
Target Start/End: Complemental strand, 14946 - 14705
Alignment:
Q  128 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 227  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14946 catcatcaccaaaatcatcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 14847  T
Q  228 cacaacaactcaccatatcatcaccaata--------------tttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaatac 313  Q
    ||||||||||||||| | |||||||||||              ||||||||||| ||||| |||| || |||||||||||||||| | || |||||||||    
T  14846 cacaacaactcaccaaaacatcaccaataattcatcaccaatttttatttgcatgtatgcgatcacaccaataattcatcaccacattcacaatcaatac 14747  T
Q  314 catatcataataaacaatgtatatggactcaccaatatcatc 355  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  14746 catatcataataaacaatgtatatggactcaccaatatcatc 14705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 485 - 613
Target Start/End: Complemental strand, 14946 - 14818
Alignment:
Q  485 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttca 584  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||| ||    
T  14946 catcatcaccaaaatcatcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 14847  T
Q  585 cacaacaactcaccatatcatcaccaata 613  Q
    ||||||||||||||| | |||||||||||    
T  14846 cacaacaactcaccaaaacatcaccaata 14818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 139; Significance: 2e-72; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 181 - 355
Target Start/End: Complemental strand, 25266679 - 25266505
Alignment:
Q  181 aaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcata 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  25266679 aaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcaca 25266580  T
Q  281 cgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcaccaatatcatc 355  Q
      |||||||||||||| | |||||||| ||||  |||||||| ||||||||||||||||||||||||||||||||    
T  25266579 tcaataattcatcacctcatgcataattaatattatatcatagtaaacaatgtatatggactcaccaatatcatc 25266505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 140 - 355
Target Start/End: Complemental strand, 28032586 - 28032372
Alignment:
Q  140 aatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactca 239  Q
    ||||||||||| ||||||||||||| ||||| |||  || ||   ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||    
T  28032586 aatcatcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactca 28032487  T
Q  240 ccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatgg 339  Q
    ||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||| || |||||||||||||||||||||| ||||||||||||||    
T  28032486 ccatatcatcaccaatatttatttgcatttatgcattcacaccaataattcatcaccacatggataatcaataccatatcataat-aacaatgtatatgg 28032388  T
Q  340 actcaccaatatcatc 355  Q
    ||||||||| ||||||    
T  28032387 actcaccaacatcatc 28032372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 128 - 355
Target Start/End: Complemental strand, 23779424 - 23779185
Alignment:
Q  128 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 227  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  23779424 catcatcaccaaaatcatcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaatattaatgcatatgtcca 23779325  T
Q  228 cacaacaactcaccatatcatca------------ccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaatacca 315  Q
    ||||| |||||| ||||||||||            ||||||| |||||||||||||||||||  || |||||||||||||||  | |||||| |||  ||    
T  23779324 cacaaaaactcatcatatcatcaccaaaatcgtcaccaatatatatttgcatttatgcaatcgcaccaataattcatcaccaagtacataattaatctca 23779225  T
Q  316 tatcataataaacaatgtatatggactcaccaatatcatc 355  Q
    ||||| |||||| || ||||||||||||||||| ||||||    
T  23779224 tatcacaataaataaggtatatggactcaccaacatcatc 23779185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 129 - 355
Target Start/End: Original strand, 17203229 - 17203453
Alignment:
Q  129 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccac 228  Q
    ||||||||||| |||||||||| || |||||||||| ||||| |||  || ||   ||||||||||||||||||||||||| || ||||||||||| |||    
T  17203229 atcatcaccaatatcatcaccatttagatatataaaaatatccgtctccatcactcatgtatgcatgaacatatgactcaacaacaatgcatatgttcac 17203328  T
Q  229 acaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaac 328  Q
    ||||||| |||||| ||  ||||||||||| ||||||||||||||||||| || |||||||||||||||| | ||| ||||||||||||||||||| | |    
T  17203329 acaacaattcaccaaattctcaccaatatt-atttgcatttatgcaatcacaccaataattcatcaccacatacattatcaataccatatcataat-agc 17203426  T
Q  329 aatgtatatggactcaccaatatcatc 355  Q
    ||| |||||||||||||||||||||||    
T  17203427 aatatatatggactcaccaatatcatc 17203453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 497 - 656
Target Start/End: Complemental strand, 28032586 - 28032428
Alignment:
Q  497 aatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactca 596  Q
    ||||||||||| ||||||||||||| ||||| |||  || ||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28032586 aatcatcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactca 28032487  T
Q  597 ccatatcatcaccaatattttatttacatttatgcaatcacatcaataattcatcaccac 656  Q
    ||||||||||||||||| ||||||| |||||||||| ||||| |||||||||||||||||    
T  28032486 ccatatcatcaccaata-tttatttgcatttatgcattcacaccaataattcatcaccac 28032428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 485 - 611
Target Start/End: Complemental strand, 23779424 - 23779298
Alignment:
Q  485 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttca 584  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |  ||||||||||| ||    
T  23779424 catcatcaccaaaatcatcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaatattaatgcatatgtcca 23779325  T
Q  585 cacaacaactcaccatatcatcaccaa 611  Q
    ||||| |||||| ||||||||||||||    
T  23779324 cacaaaaactcatcatatcatcaccaa 23779298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 486 - 713
Target Start/End: Original strand, 17203229 - 17203453
Alignment:
Q  486 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcac 585  Q
    ||||||||||| |||||||||| || |||||||||| ||||| |||  || ||   ||||||||||||||||||||||||||||||||||||||||||||    
T  17203229 atcatcaccaatatcatcaccatttagatatataaaaatatccgtctccatcactcatgtatgcatgaacatatgactcaacaacaatgcatatgttcac 17203328  T
Q  586 acaacaactcaccatatcatcaccaatattttatttacatttatgcaatcacatcaataattcatcaccacgtatataatcatacatcatgtcataataa 685  Q
    ||||||| |||||| ||  |||||||||  |||||| |||||||||||||||| ||||||||||||||||| || || |||| | | ||| ||||||||     
T  17203329 acaacaattcaccaaattctcaccaata--ttatttgcatttatgcaatcacaccaataattcatcaccacatacattatca-ataccatatcataatag 17203425  T
Q  686 acatacacatggattcaccaatatcatc 713  Q
      ||| | ||||| ||||||||||||||    
T  17203426 caatatatatggactcaccaatatcatc 17203453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 538 - 654
Target Start/End: Complemental strand, 25266679 - 25266564
Alignment:
Q  538 aaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatatcatcaccaatattttatttacatttatgcaatcac 637  Q
    ||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  25266679 aaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaata-tttatttgcatttatgcaatcac 25266581  T
Q  638 atcaataattcatcacc 654  Q
    |||||||||||||||||    
T  25266580 atcaataattcatcacc 25266564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 242 - 354
Target Start/End: Original strand, 22255294 - 22255406
Alignment:
Q  242 atatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggac 341  Q
    ||||||||||||||||| ||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22255294 atatcatcaccaatattcatttgcatttatgcaatcacaccgataattcatcaccacttgcataatcaataccatatcacaataaacaatgtatatggac 22255393  T
Q  342 tcaccaatatcat 354  Q
     ||||||||||||    
T  22255394 ccaccaatatcat 22255406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 185 - 363
Target Start/End: Original strand, 22255130 - 22255309
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaa-caactcaccatatcatcaccaatatttatttgcatttatgcaatcatacga 283  Q
    |||||||||| |||||||  ||||| || ||| ||||||| || |||| ||| |||||||||  ||||||||  ||| ||||||||||||||||| || |    
T  22255130 atgtatgcataaacatatatctcaacaacaatacatatgttcatacaaacaattcaccatattctcaccaattattacttgcatttatgcaatcacacca 22255229  T
Q  284 ataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcaccaatatcatcaccaatat 363  Q
    | ||||||||||||||||||||||||||||||||| | |||||||||| ||||| |||||||||||||||||||||||||    
T  22255230 acaattcatcaccacttgcataatcaataccatattacaataaacaatatatattgactcaccaatatcatcaccaatat 22255309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 255 - 355
Target Start/End: Complemental strand, 7513355 - 7513256
Alignment:
Q  255 tatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcaccaatatcat 354  Q
    |||||||||||||||| | ||||| || |||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  7513355 tatttatttgcatttaggtaatcacaccaataattcatcaccacatacataatcaataccatatcataat-aacaatgtatatggactcaccaatatcat 7513257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 503 - 599
Target Start/End: Original strand, 32464580 - 32464675
Alignment:
Q  503 caccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcacca 599  Q
    ||||| ||||||||||||| |||||||||| || ||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32464580 caccatttggatatataaa-atatctgtcaccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcacca 32464675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 486 - 599
Target Start/End: Original strand, 22254985 - 22255099
Alignment:
Q  486 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcac 585  Q
    |||||||| || |||||||||| ||||||||||||| |||| ||||  || ||   |||||||||||||||||||||||||||||||| |||||||||||    
T  22254985 atcatcactaatatcatcaccatttggatatataaaaatatttgtctccatcagtcatgtatgcatgaacatatgactcaacaacaattcatatgttcac 22255084  T
Q  586 ac-aacaactcacca 599  Q
    || ||||||||||||    
T  22255085 acaaacaactcacca 22255099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 146 - 242
Target Start/End: Original strand, 32464580 - 32464675
Alignment:
Q  146 caccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcacca 242  Q
    ||||| ||||||||||||| |||||||||| || ||   ||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||    
T  32464580 caccatttggatatataaa-atatctgtcaccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcacca 32464675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 502 - 599
Target Start/End: Complemental strand, 7513620 - 7513522
Alignment:
Q  502 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcacca 599  Q
    |||||| ||||||||||||| |||| ||||  || ||   |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  7513620 tcaccatttggatatataaaaatatttgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatacatatgttcacacaaacaactcacca 7513522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 542 - 599
Target Start/End: Complemental strand, 42179935 - 42179877
Alignment:
Q  542 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcacca 599  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  42179935 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 42179877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 542 - 656
Target Start/End: Original strand, 22255130 - 22255244
Alignment:
Q  542 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcaccatatcatcaccaatattttatttacatttatgcaatcacatc 640  Q
    |||||||||| |||||||  |||||||||||| |||||||||| || ||||| |||||||||  |||||||| | ||| || |||||||||||||||| |    
T  22255130 atgtatgcataaacatatatctcaacaacaatacatatgttcatacaaacaattcaccatattctcaccaat-tattacttgcatttatgcaatcacacc 22255228  T
Q  641 aataattcatcaccac 656  Q
    || |||||||||||||    
T  22255229 aacaattcatcaccac 22255244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 129 - 242
Target Start/End: Original strand, 22254985 - 22255099
Alignment:
Q  129 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccac 228  Q
    |||||||| || |||||||||| ||||||||||||| |||| ||||  || ||   ||||||||||||||||||||||||| || ||| ||||||| |||    
T  22254985 atcatcactaatatcatcaccatttggatatataaaaatatttgtctccatcagtcatgtatgcatgaacatatgactcaacaacaattcatatgttcac 22255084  T
Q  229 ac-aacaactcacca 242  Q
    || ||||||||||||    
T  22255085 acaaacaactcacca 22255099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 542 - 655
Target Start/End: Complemental strand, 7513491 - 7513379
Alignment:
Q  542 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcaccatatcatcaccaatattttatttacatttatgcaatcacatc 640  Q
    |||||||||| |||||||  |||||||||||| |||||||||| || ||||| | |||||||  |||||||||  ||| || |||||||||||||||| |    
T  7513491 atgtatgcataaacatatttctcaacaacaatacatatgttcatacaaacaatttaccatattctcaccaata--ttacttgcatttatgcaatcacacc 7513394  T
Q  641 aataattcatcacca 655  Q
    |||||||||| ||||    
T  7513393 aataattcattacca 7513379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 546 - 589
Target Start/End: Complemental strand, 16294281 - 16294238
Alignment:
Q  546 atgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  16294281 atgcatgaacatatgactcgacaacaatgcatatgttcacacaa 16294238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 546 - 589
Target Start/End: Original strand, 22331303 - 22331346
Alignment:
Q  546 atgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  22331303 atgcatgaacatatgactcgacaacaatgcatatgttcacacaa 22331346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 242
Target Start/End: Complemental strand, 7513620 - 7513522
Alignment:
Q  145 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 242  Q
    |||||| ||||||||||||| |||| ||||  || ||   ||||||||||||||||||||||||| || ||| ||||||| ||||| ||||||||||||    
T  7513620 tcaccatttggatatataaaaatatttgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatacatatgttcacacaaacaactcacca 7513522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 242
Target Start/End: Complemental strand, 42179935 - 42179877
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 242  Q
    ||||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||    
T  42179935 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 42179877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 542 - 589
Target Start/End: Original strand, 22331477 - 22331524
Alignment:
Q  542 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    |||||||||| |||||||| ||||||||||||||||||||| ||||||    
T  22331477 atgtatgcataaacatatggctcaacaacaatgcatatgtttacacaa 22331524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 542 - 585
Target Start/End: Original strand, 25593792 - 25593835
Alignment:
Q  542 atgtatgcatgaacatatgactcaacaacaatgcatatgttcac 585  Q
    ||||||||||||||||||||||| |||| |||||||||||||||    
T  25593792 atgtatgcatgaacatatgactcgacaataatgcatatgttcac 25593835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 297
Target Start/End: Complemental strand, 7513491 - 7513379
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaa-caactcaccatatcatcaccaatatttatttgcatttatgcaatcatacga 283  Q
    |||||||||| |||||||  ||||| || ||| ||||||| || |||| ||| | |||||||  ||||||||||| | ||||||||||||||||| || |    
T  7513491 atgtatgcataaacatatttctcaacaacaatacatatgttcatacaaacaatttaccatattctcaccaatatt-acttgcatttatgcaatcacacca 7513393  T
Q  284 ataattcatcacca 297  Q
    ||||||||| ||||    
T  7513392 ataattcattacca 7513379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 599 - 656
Target Start/End: Original strand, 22255294 - 22255350
Alignment:
Q  599 atatcatcaccaatattttatttacatttatgcaatcacatcaataattcatcaccac 656  Q
    |||||||||||||||||  |||| |||||||||||||||| | |||||||||||||||    
T  22255294 atatcatcaccaatattc-atttgcatttatgcaatcacaccgataattcatcaccac 22255350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 42179677 - 42179632
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcac 357  Q
    ||||||||||||||||||||||||||||| ||| || |||||||||    
T  42179677 accatatcataataaacaatgtatatggattcatcattatcatcac 42179632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 312 - 356
Target Start/End: Original strand, 32464832 - 32464876
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatca 356  Q
    |||||||||||||||||||  |||||||| |||||||||||||||    
T  32464832 accatatcataataaacaacatatatggattcaccaatatcatca 32464876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 542 - 589
Target Start/End: Original strand, 22331388 - 22331435
Alignment:
Q  542 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    |||||||||| |||||||  ||||||||||||| ||||||||||||||    
T  22331388 atgtatgcataaacatatatctcaacaacaatgtatatgttcacacaa 22331435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 224
Target Start/End: Original strand, 25593792 - 25593831
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgt 224  Q
    ||||||||||||||||||||||| | ||||||||||||||    
T  25593792 atgtatgcatgaacatatgactcgacaataatgcatatgt 25593831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 615 - 713
Target Start/End: Complemental strand, 7513353 - 7513256
Alignment:
Q  615 tttatttacatttatgcaatcacatcaataattcatcaccacgtatataatcatacatcatgtcataataaacatacacatggattcaccaatatcatc 713  Q
    ||||||| |||||| | ||||||| ||||||||||||||||| || ||||||| | | ||| |||||||||  ||  | ||||| ||||||||||||||    
T  7513353 tttatttgcatttaggtaatcacaccaataattcatcaccacatacataatca-ataccatatcataataacaatgtatatggactcaccaatatcatc 7513256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 547 - 599
Target Start/End: Original strand, 28773364 - 28773413
Alignment:
Q  547 tgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcacca 599  Q
    ||||||||||||||||   ||||||||||||||||||| ||||||| ||||||    
T  28773364 tgcatgaacatatgac---acaacaatgcatatgttcatacaacaaatcacca 28773413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 542 - 615
Target Start/End: Complemental strand, 42179846 - 42179772
Alignment:
Q  542 atgtatgcatgaacatatgactcaacaacaatgcatatgttca-cacaacaactcaccatatcatcaccaatatt 615  Q
    |||||||||| |||||||  |||||||||||| |||||||||| |  |||||||||||||||  |||| ||||||    
T  42179846 atgtatgcataaacatatatctcaacaacaatacatatgttcatccaaacaactcaccatattctcactaatatt 42179772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 136; Significance: 1e-70; HSPs: 2)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 156 - 355
Target Start/End: Original strand, 4149 - 4346
Alignment:
Q  156 atatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaat 255  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  4149 atatataaacatatccgtcatcaccaaatatgcatgcatgaacatatgactcgataataatgcatatgtccacacaacaactcaccaaatcatcaccaat 4248  T
Q  256 atttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcaccaatatcatc 355  Q
    ||||||||||||||||||||||| || |||||||||||||||  | ||||||||||||||||||| ||| ||||| ||||| || |||||||||||||||    
T  4249 atttatttgcatttatgcaatcacaccaataattcatcacca-atacataatcaataccatatcacaat-aacaacgtatacgggctcaccaatatcatc 4346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 513 - 655
Target Start/End: Original strand, 4149 - 4290
Alignment:
Q  513 atatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatatcatcaccaat 612  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||||||| | || ||||||||||| ||||||||||||||||| ||||||||||||    
T  4149 atatataaacatatccgtcatcaccaaatatgcatgcatgaacatatgactcgataataatgcatatgtccacacaacaactcaccaaatcatcaccaat 4248  T
Q  613 attttatttacatttatgcaatcacatcaataattcatcacca 655  Q
    | ||||||| |||||||||||||||| ||||||||||||||||    
T  4249 a-tttatttgcatttatgcaatcacaccaataattcatcacca 4290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 135; Significance: 6e-70; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 129 - 363
Target Start/End: Complemental strand, 165950 - 165717
Alignment:
Q  129 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccac 228  Q
    ||||||||||| |||||||||| ||||||||||||| |||| ||||  || ||   ||||||||||||||||||||||||| || ||||||||||| |||    
T  165950 atcatcaccaatatcatcaccatttggatatataaaaatatttgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcac 165851  T
Q  229 acaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaac 328  Q
    |||||||||||||| ||  ||||||||||||||||||||||||||||||| || |||||||||||||||  | |||||||||| |||||||| |||||||    
T  165850 acaacaactcaccaaattctcaccaatatttatttgcatttatgcaatcacaccaataattcatcacca-atacataatcaatcccatatcacaataaac 165752  T
Q  329 aatgtatatggactcaccaatatcatcaccaatat 363  Q
    |||||||||||||||| ||||||||||||||||||    
T  165751 aatgtatatggactcatcaatatcatcaccaatat 165717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 486 - 655
Target Start/End: Complemental strand, 165950 - 165782
Alignment:
Q  486 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcac 585  Q
    ||||||||||| |||||||||| ||||||||||||| |||| ||||  || ||   ||||||||||||||||||||||||||||||||||||||||||||    
T  165950 atcatcaccaatatcatcaccatttggatatataaaaatatttgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcac 165851  T
Q  586 acaacaactcaccatatcatcaccaatattttatttacatttatgcaatcacatcaataattcatcacca 655  Q
    |||||||||||||| ||  ||||||||| ||||||| |||||||||||||||| ||||||||||||||||    
T  165850 acaacaactcaccaaattctcaccaata-tttatttgcatttatgcaatcacaccaataattcatcacca 165782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 242 - 363
Target Start/End: Complemental strand, 165732 - 165612
Alignment:
Q  242 atatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggac 341  Q
    ||||||||||||||||||||||||||| ||| ||||| ||   ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  165732 atatcatcaccaatatttatttgcatt-atgaaatcacaccggtaattcatcaccacttgcataatcaataccatatcataataaacaatgtatttggac 165634  T
Q  342 tcaccaatatcatcaccaatat 363  Q
    ||||||||||||||||||||||    
T  165633 tcaccaatatcatcaccaatat 165612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 134; Significance: 2e-69; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 128 - 296
Target Start/End: Original strand, 32949770 - 32949939
Alignment:
Q  128 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaa-tatgtatgcatgaacatatgactcaataataatgcatatgtcc 226  Q
    ||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  32949770 catcatcaccaaaatcatcaccaattgaatatataaaaatatccgtcatcaccaaaatatgtatgcatgaacatatgactcaataataatgcatatgtcc 32949869  T
Q  227 acacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcacc 296  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| || | ||||||||||||    
T  32949870 acacaacaactcaccatatcttcaccaatatttatttgcatttatgcaatcacaccattaattcatcacc 32949939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 129 - 355
Target Start/End: Original strand, 7527801 - 7528025
Alignment:
Q  129 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccac 228  Q
    ||||||||||| |||||||||| ||||||||||||| ||||| |||  || ||   |||||||||||||||||||||||||||||||||||||| |||||    
T  7527801 atcatcaccaatatcatcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaataataatgcatatatccac 7527900  T
Q  229 acaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaac 328  Q
    |||||||||||||| ||  ||||||||| ||||||||||||||||||||| || || ||||||||||||| || |||||||  ||||||||||||| |||    
T  7527901 acaacaactcaccaaattctcaccaata-ttatttgcatttatgcaatcacaccaacaattcatcaccacatggataatcagcaccatatcataat-aac 7527998  T
Q  329 aatgtatatggactcaccaatatcatc 355  Q
    |||||||||||||||||||||||||||    
T  7527999 aatgtatatggactcaccaatatcatc 7528025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 485 - 654
Target Start/End: Original strand, 32949770 - 32949939
Alignment:
Q  485 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaa-tatgtatgcatgaacatatgactcaacaacaatgcatatgttc 583  Q
    ||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||| |||||||||||||||||||||||||| || ||||||||||| |    
T  32949770 catcatcaccaaaatcatcaccaattgaatatataaaaatatccgtcatcaccaaaatatgtatgcatgaacatatgactcaataataatgcatatgtcc 32949869  T
Q  584 acacaacaactcaccatatcatcaccaatattttatttacatttatgcaatcacatcaataattcatcacc 654  Q
    |||||||||||||||||||| ||||||||| ||||||| |||||||||||||||| || ||||||||||||    
T  32949870 acacaacaactcaccatatcttcaccaata-tttatttgcatttatgcaatcacaccattaattcatcacc 32949939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 486 - 655
Target Start/End: Original strand, 17908361 - 17908528
Alignment:
Q  486 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcac 585  Q
    ||||||||||| |||||||||| ||||||||||||| ||||| |||  || ||   ||||||||||||||||||||||||||||||||||||||||||||    
T  17908361 atcatcaccaatatcatcaccatttggatatataaa-atatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcac 17908459  T
Q  586 acaacaactcaccatatcatcaccaatattttatttacatttatgcaatcacatcaataattcatcacca 655  Q
    |||||||||||| | ||  ||||||||| ||||||| ||||||||| |||||| ||||||||||||||||    
T  17908460 acaacaactcacaaaattctcaccaata-tttatttgcatttatgcgatcacaccaataattcatcacca 17908528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 129 - 297
Target Start/End: Original strand, 17908361 - 17908528
Alignment:
Q  129 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccac 228  Q
    ||||||||||| |||||||||| ||||||||||||| ||||| |||  || ||   ||||||||||||||||||||||||| || ||||||||||| |||    
T  17908361 atcatcaccaatatcatcaccatttggatatataaa-atatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcac 17908459  T
Q  229 acaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcacca 297  Q
    |||||||||||| | ||  |||||||||||||||||||||||||| |||| || |||||||||||||||    
T  17908460 acaacaactcacaaaattctcaccaatatttatttgcatttatgcgatcacaccaataattcatcacca 17908528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 486 - 713
Target Start/End: Original strand, 7527801 - 7528025
Alignment:
Q  486 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcac 585  Q
    ||||||||||| |||||||||| ||||||||||||| ||||| |||  || ||   ||||||||||||||||||||||||| || ||||||||| | |||    
T  7527801 atcatcaccaatatcatcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaataataatgcatatatccac 7527900  T
Q  586 acaacaactcaccatatcatcaccaatattttatttacatttatgcaatcacatcaataattcatcaccacgtatataatcatacatcatgtcataataa 685  Q
    |||||||||||||| ||  |||||||||  |||||| |||||||||||||||| ||| ||||||||||||| |  |||||||  || ||| |||||||||    
T  7527901 acaacaactcaccaaattctcaccaata--ttatttgcatttatgcaatcacaccaacaattcatcaccacatggataatca-gcaccatatcataataa 7527997  T
Q  686 acatacacatggattcaccaatatcatc 713  Q
      ||  | ||||| ||||||||||||||    
T  7527998 caatgtatatggactcaccaatatcatc 7528025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 486 - 599
Target Start/End: Complemental strand, 23985876 - 23985763
Alignment:
Q  486 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcac 585  Q
    ||||||||||| |||||||||| ||||||||||||| ||||| |||  || ||   ||||||||||||||||||||||||||||||||||||||||||||    
T  23985876 atcatcaccaatatcatcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcac 23985777  T
Q  586 acaacaactcacca 599  Q
    ||||||||||||||    
T  23985776 acaacaactcacca 23985763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 502 - 615
Target Start/End: Original strand, 2030516 - 2030629
Alignment:
Q  502 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccata 601  Q
    |||||| ||||||||||||| |||| ||||  || ||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2030516 tcaccatttggatatataaaaatatttgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccata 2030615  T
Q  602 tcatcaccaatatt 615  Q
    |  |||||||||||    
T  2030616 ttctcaccaatatt 2030629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 245 - 355
Target Start/End: Original strand, 17908520 - 17908629
Alignment:
Q  245 tcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactca 344  Q
    ||||||||||||||| |||||||||||||||||| || |||||||||||||||  | |||||||||| |||||||| |||||||||||||||| ||||||    
T  17908520 tcatcaccaatatttgtttgcatttatgcaatcacaccaataattcatcacca-atacataatcaatcccatatcacaataaacaatgtatatagactca 17908618  T
Q  345 ccaatatcatc 355  Q
     ||||||||||    
T  17908619 tcaatatcatc 17908629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 502 - 615
Target Start/End: Original strand, 25003564 - 25003677
Alignment:
Q  502 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccata 601  Q
    |||||| ||||||||||||| |||| ||||  || ||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25003564 tcaccatttggatatataaaaatatatgtctccatcattcgtgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccata 25003663  T
Q  602 tcatcaccaatatt 615  Q
    |  |||||||||||    
T  25003664 ttctcaccaatatt 25003677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 129 - 267
Target Start/End: Complemental strand, 23985876 - 23985739
Alignment:
Q  129 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccac 228  Q
    ||||||||||| |||||||||| ||||||||||||| ||||| |||  || ||   ||||||||||||||||||||||||| || ||||||||||| |||    
T  23985876 atcatcaccaatatcatcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcac 23985777  T
Q  229 acaacaactcaccatatcatcaccaatatttatttgcat 267  Q
    |||||||||||||| ||  |||||| || ||||||||||    
T  23985776 acaacaactcaccaaattctcaccatta-ttatttgcat 23985739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 145 - 258
Target Start/End: Original strand, 2030516 - 2030629
Alignment:
Q  145 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccata 244  Q
    |||||| ||||||||||||| |||| ||||  || ||   ||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  2030516 tcaccatttggatatataaaaatatttgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccata 2030615  T
Q  245 tcatcaccaatatt 258  Q
    |  |||||||||||    
T  2030616 ttctcaccaatatt 2030629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 502 - 599
Target Start/End: Original strand, 34938048 - 34938146
Alignment:
Q  502 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcacca 599  Q
    |||||| ||||||||||||| ||||| |||  || ||   |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  34938048 tcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 34938146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 145 - 258
Target Start/End: Original strand, 25003564 - 25003677
Alignment:
Q  145 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccata 244  Q
    |||||| ||||||||||||| |||| ||||  || ||    |||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  25003564 tcaccatttggatatataaaaatatatgtctccatcattcgtgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccata 25003663  T
Q  245 tcatcaccaatatt 258  Q
    |  |||||||||||    
T  25003664 ttctcaccaatatt 25003677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 312 - 390
Target Start/End: Original strand, 34938338 - 34938416
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttg 390  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||   |  |||||||||||||||| |||||||||    
T  34938338 accatatcataataaacaatgtatatggattcaccaatatcatcaccttcacataatttcacatcaaatacatgatttg 34938416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 312 - 403
Target Start/End: Original strand, 2030728 - 2030819
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttgttcttattccaag 403  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||   |  |||||||||||||| | ||||||||| ||  ||||||||    
T  2030728 accatatcataataaacaatgtatatggattcaccaatatcatcaccttcacataatttcacatcaattacatgatttgctcacattccaag 2030819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 312 - 390
Target Start/End: Complemental strand, 29191461 - 29191383
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttg 390  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||   |  |||||||||||||||| |||||||||    
T  29191461 accatatcataataaacaatatatatggattcaccaatatcatcaccttcacataatttcacatcaaatacatgatttg 29191383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 312 - 403
Target Start/End: Original strand, 25003764 - 25003855
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttgttcttattccaag 403  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||   |  |||||||| ||||||| ||||||||| ||  ||||||||    
T  25003764 accatatcataacaaacaatgtatatggattcaccaatatcatcaccttcacgtaatttcatatcaaatacatgatttgctcacattccaag 25003855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 145 - 242
Target Start/End: Original strand, 34938048 - 34938146
Alignment:
Q  145 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 242  Q
    |||||| ||||||||||||| ||||| |||  || ||   ||||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||    
T  34938048 tcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 34938146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 546 - 589
Target Start/End: Complemental strand, 14343394 - 14343351
Alignment:
Q  546 atgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  14343394 atgcatgaacatatgactcaacaacaatgtatatgttcacacaa 14343351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 546 - 589
Target Start/End: Complemental strand, 18225608 - 18225565
Alignment:
Q  546 atgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  18225608 atgcatgaacatatggctcaacaacaatgcatatgttcacacaa 18225565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 589
Target Start/End: Complemental strand, 16836913 - 16836869
Alignment:
Q  546 atgcatgaacatatgactcaacaac-aatgcatatgttcacacaa 589  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  16836913 atgcatgaacatatgactcaacaactaatgcatatgttcacacaa 16836869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 677 - 735
Target Start/End: Complemental strand, 29191455 - 29191396
Alignment:
Q  677 tcataataaaca-tacacatggattcaccaatatcatcaccttctcataatttcatatca 735  Q
    |||||||||||| || | |||||||||||||||||||||||||| |||||||||| ||||    
T  29191455 tcataataaacaatatatatggattcaccaatatcatcaccttcacataatttcacatca 29191396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 693 - 735
Target Start/End: Complemental strand, 23985634 - 23985592
Alignment:
Q  693 catggattcaccaatatcatcaccttctcataatttcatatca 735  Q
    ||||||||||||||||||||||||||| ||||| |||||||||    
T  23985634 catggattcaccaatatcatcaccttcacataacttcatatca 23985592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 542 - 615
Target Start/End: Original strand, 34938177 - 34938251
Alignment:
Q  542 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcaccatatcatcaccaatatt 615  Q
    |||||||||| |||||||  |||||||||||| |||||||||| || ||||| |||||||||  |||||||||||    
T  34938177 atgtatgcataaacatatatctcaacaacaatacatatgttcatacaaacaattcaccatattctcaccaatatt 34938251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 694 - 735
Target Start/End: Original strand, 2030752 - 2030793
Alignment:
Q  694 atggattcaccaatatcatcaccttctcataatttcatatca 735  Q
    |||||||||||||||||||||||||| |||||||||| ||||    
T  2030752 atggattcaccaatatcatcaccttcacataatttcacatca 2030793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 602 - 655
Target Start/End: Original strand, 17908520 - 17908572
Alignment:
Q  602 tcatcaccaatattttatttacatttatgcaatcacatcaataattcatcacca 655  Q
    |||||||||||||||  ||| |||||||||||||||| ||||||||||||||||    
T  17908520 tcatcaccaatatttg-tttgcatttatgcaatcacaccaataattcatcacca 17908572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 694 - 735
Target Start/End: Original strand, 25003788 - 25003829
Alignment:
Q  694 atggattcaccaatatcatcaccttctcataatttcatatca 735  Q
    |||||||||||||||||||||||||| | |||||||||||||    
T  25003788 atggattcaccaatatcatcaccttcacgtaatttcatatca 25003829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 694 - 735
Target Start/End: Original strand, 34938362 - 34938403
Alignment:
Q  694 atggattcaccaatatcatcaccttctcataatttcatatca 735  Q
    |||||||||||||||||||||||||| |||||||||| ||||    
T  34938362 atggattcaccaatatcatcaccttcacataatttcacatca 34938403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 546 - 589
Target Start/End: Complemental strand, 11764957 - 11764913
Alignment:
Q  546 atgcatgaacatatgactc-aacaacaatgcatatgttcacacaa 589  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||    
T  11764957 atgcatgaacatatgtctctaacaacaatgcatatgttcacacaa 11764913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 542 - 585
Target Start/End: Original strand, 19872558 - 19872601
Alignment:
Q  542 atgtatgcatgaacatatgactcaacaacaatgcatatgttcac 585  Q
    ||||||||||||| ||||||||| |||| |||||||||||||||    
T  19872558 atgtatgcatgaaaatatgactctacaataatgcatatgttcac 19872601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 312 - 390
Target Start/End: Complemental strand, 23112345 - 23112266
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaa-tatcatcaccaatatctaatttcacatcaaatgcatgatttg 390  Q
    ||||||||||||||||||||||| ||| | ||||||| ||||||||||  ||  ||||||||||||| ||  ||||||||    
T  23112345 accatatcataataaacaatgtagatgtattcaccaattatcatcacctttacataatttcacatcagatatatgatttg 23112266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1486 (Bit Score: 127; Significance: 3e-65; HSPs: 2)
Name: scaffold1486
Description:

Target: scaffold1486; HSP #1
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 485 - 635
Target Start/End: Original strand, 1599 - 1748
Alignment:
Q  485 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttca 584  Q
    ||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1599 catcatcaccaaa-tcaacaccaattggatatataaacatatccgtcatcaccaaatatgtatgcattaacatatgactcaacaacaatgcatatgttca 1697  T
Q  585 cacaacaactcaccatatcatcaccaatattttatttacatttatgcaatc 635  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  1698 cacaacaactcaccatatcatcaccaatattttatttgcatttatgcaatc 1748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1486; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 128 - 277
Target Start/End: Original strand, 1599 - 1748
Alignment:
Q  128 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 227  Q
    ||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || ||||||||||| ||    
T  1599 catcatcaccaaa-tcaacaccaattggatatataaacatatccgtcatcaccaaatatgtatgcattaacatatgactcaacaacaatgcatatgttca 1697  T
Q  228 cacaacaactcaccatatcatcaccaata-tttatttgcatttatgcaatc 277  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  1698 cacaacaactcaccatatcatcaccaatattttatttgcatttatgcaatc 1748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 127; Significance: 3e-65; HSPs: 2)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 129 - 355
Target Start/End: Complemental strand, 7571 - 7347
Alignment:
Q  129 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccac 228  Q
    |||||||||||||||||||||| ||||||||||||| |||||  ||   | ||   ||||||||||||||||||||||||||||||||||||||||||||    
T  7571 atcatcaccaaaatcatcaccatttggatatataaa-atatccatctcgatcagtcatgtatgcatgaacatatgactcaataataatgcatatgtccac 7473  T
Q  229 acaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaac 328  Q
    |||||||||||||| ||  ||||||||||  ||||||||||||||||||| |||||||| |||||||||| | ||||||||||| ||||||| |||||||    
T  7472 acaacaactcaccaaattctcaccaatatc-atttgcatttatgcaatcacacgaataaatcatcaccacatacataatcaatatcatatcacaataaac 7374  T
Q  329 aatgtatatggactcaccaatatcatc 355  Q
    |||||||||||||||||||| ||||||    
T  7373 aatgtatatggactcaccaacatcatc 7347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 486 - 688
Target Start/End: Complemental strand, 7571 - 7373
Alignment:
Q  486 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcac 585  Q
    |||||||||||||||||||||| ||||||||||||| |||||  ||   | ||   ||||||||||||||||||||||||| || ||||||||||| |||    
T  7571 atcatcaccaaaatcatcaccatttggatatataaa-atatccatctcgatcagtcatgtatgcatgaacatatgactcaataataatgcatatgtccac 7473  T
Q  586 acaacaactcaccatatcatcaccaatattttatttacatttatgcaatcacatcaataattcatcaccacgtatataatcatacatcatgtcataataa 685  Q
    |||||||||||||| ||  |||||||||  | |||| ||||||||||||||||  ||||| |||||||||| || ||||||| | ||||| ||| |||||    
T  7472 acaacaactcaccaaattctcaccaata--tcatttgcatttatgcaatcacacgaataaatcatcaccacatacataatca-atatcatatcacaataa 7376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1666 (Bit Score: 119; Significance: 2e-60; HSPs: 2)
Name: scaffold1666
Description:

Target: scaffold1666; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 128 - 355
Target Start/End: Complemental strand, 1071 - 832
Alignment:
Q  128 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 227  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  1071 catcatcaccaaaatcatcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaagatatgaatcaataataatgcatatgtcca 972  T
Q  228 cacaacaactcaccatatcatca------------ccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaatacca 315  Q
    ||||| |||||||||||||||||            ||||||| |||||||| ||||||||||  || ||||||| |||||||  | | |||  |||||||    
T  971 cacaaaaactcaccatatcatcaccaaaatcatcaccaatatatatttgcaattatgcaatcgcaccaataatttatcaccaagtacttaaataatacca 872  T
Q  316 tatcataataaacaatgtatatggactcaccaatatcatc 355  Q
    ||||| ||||||||| |||||||||||||| || ||||||    
T  871 tatcacaataaacaaggtatatggactcactaacatcatc 832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1666; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 485 - 611
Target Start/End: Complemental strand, 1071 - 945
Alignment:
Q  485 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttca 584  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||| || ||||||||||| ||    
T  1071 catcatcaccaaaatcatcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaagatatgaatcaataataatgcatatgtcca 972  T
Q  585 cacaacaactcaccatatcatcaccaa 611  Q
    ||||| |||||||||||||||||||||    
T  971 cacaaaaactcaccatatcatcaccaa 945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 102; Significance: 3e-50; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 602 - 735
Target Start/End: Original strand, 20252983 - 20253115
Alignment:
Q  602 tcatcaccaatattttatttacatttatgcaatcacatcaataattcatcaccacgtatataatcatacatcatgtcataataaacatacacatggattc 701  Q
    |||| |||||||||| |||| |||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  20252983 tcattaccaatattt-atttgcatttatgcaatcacaccaataattcatcaccacttatataatcatacaccatgtcataataaacatacacatggattc 20253081  T
Q  702 accaatatcatcaccttctcataatttcatatca 735  Q
    |||||| |||||||||||||||||||||||||||    
T  20253082 accaatgtcatcaccttctcataatttcatatca 20253115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 502 - 655
Target Start/End: Original strand, 20252795 - 20252947
Alignment:
Q  502 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcaccat 600  Q
    |||||| ||||||||||||| ||||| |||  || ||   ||||||||||||||||||  || ||||||||| |||||||||| || |||||||||||||    
T  20252795 tcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatatcttaacaacaatacatatgttcatacaaacaactcaccat 20252894  T
Q  601 atcatcaccaatattttatttacatttatgcaatcacatcaataattcatcacca 655  Q
    ||  |||||||||  ||| || |||||||||||||||| ||||||| ||| ||||    
T  20252895 attctcaccaata--ttacttgcatttatgcaatcacaccaataatccattacca 20252947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 245 - 358
Target Start/End: Original strand, 20252983 - 20253096
Alignment:
Q  245 tcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatca-ataccatatcataataaacaatgtatatggactc 343  Q
    |||| ||||||||||||||||||||||||||||| || ||||||||||||||||||  ||||||| | ||||| ||||||||||| ||  | ||||| ||    
T  20252983 tcattaccaatatttatttgcatttatgcaatcacaccaataattcatcaccacttatataatcatacaccatgtcataataaac-atacacatggattc 20253081  T
Q  344 accaatatcatcacc 358  Q
    |||||| ||||||||    
T  20253082 accaatgtcatcacc 20253096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 312 - 390
Target Start/End: Original strand, 32650500 - 32650578
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttg 390  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||  ||  ||||||||||||| ||  ||||||||    
T  32650500 accatatcataataaacaatgtatatggattcaccaatatcatcacccttacataatttcacatcagatatatgatttg 32650578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 297
Target Start/End: Original strand, 20252795 - 20252947
Alignment:
Q  145 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaa-caactcaccat 243  Q
    |||||| ||||||||||||| ||||| |||  || ||   ||||||||||||||||||  || || || ||| ||||||| || |||| |||||||||||    
T  20252795 tcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatatcttaacaacaatacatatgttcatacaaacaactcaccat 20252894  T
Q  244 atcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcacca 297  Q
    ||  ||||||||| ||| ||||||||||||||||| || |||||| ||| ||||    
T  20252895 attctcaccaata-ttacttgcatttatgcaatcacaccaataatccattacca 20252947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 546 - 589
Target Start/End: Original strand, 18164808 - 18164851
Alignment:
Q  546 atgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  18164808 atgcatgaacatatgactcgacaacaatgcatatgttcacacaa 18164851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 542 - 592
Target Start/End: Original strand, 20192828 - 20192878
Alignment:
Q  542 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaa 592  Q
    ||||||||||||||||||||||| |||| ||||||||||||||| ||||||    
T  20192828 atgtatgcatgaacatatgactcgacaataatgcatatgttcacccaacaa 20192878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 250 - 297
Target Start/End: Original strand, 20252944 - 20252991
Alignment:
Q  250 accaatatttatttgcatttatgcaatcatacgaataattcatcacca 297  Q
    ||||||||||||||||||||||||||||| || |||||||||| ||||    
T  20252944 accaatatttatttgcatttatgcaatcacaccaataattcattacca 20252991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 542 - 585
Target Start/End: Original strand, 25093480 - 25093523
Alignment:
Q  542 atgtatgcatgaacatatgactcaacaacaatgcatatgttcac 585  Q
    ||||||||||||||||||||||| |||| |||||||||||||||    
T  25093480 atgtatgcatgaacatatgactcgacaataatgcatatgttcac 25093523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 20192828 - 20192878
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaa 235  Q
    ||||||||||||||||||||||| | |||||||||||||| ||| ||||||    
T  20192828 atgtatgcatgaacatatgactcgacaataatgcatatgttcacccaacaa 20192878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 224
Target Start/End: Original strand, 25093480 - 25093519
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgt 224  Q
    ||||||||||||||||||||||| | ||||||||||||||    
T  25093480 atgtatgcatgaacatatgactcgacaataatgcatatgt 25093519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 20253311 - 20253357
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcacc 358  Q
    |||||||||||||||  |||||||||||| ||||||| |||||||||    
T  20253311 accatatcataataaggaatgtatatggattcaccaaaatcatcacc 20253357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 96; Significance: 1e-46; HSPs: 4)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 129 - 254
Target Start/End: Complemental strand, 261 - 140
Alignment:
Q  129 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccac 228  Q
    |||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||   ||||||||||||||||||||||||||||||||    
T  261 atcatcaccaaatt-atcaccaattggatatataaacatatccgtcatcaccaaatatgtatgca---acatatgactcaataataatgcatatgtccac 166  T
Q  229 acaacaactcaccatatcatcaccaa 254  Q
    ||||||||||||||||||||||||||    
T  165 acaacaactcaccatatcatcaccaa 140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 486 - 611
Target Start/End: Complemental strand, 261 - 140
Alignment:
Q  486 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcac 585  Q
    |||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||   ||||||||||||| || ||||||||||| |||    
T  261 atcatcaccaaatt-atcaccaattggatatataaacatatccgtcatcaccaaatatgtatgca---acatatgactcaataataatgcatatgtccac 166  T
Q  586 acaacaactcaccatatcatcaccaa 611  Q
    ||||||||||||||||||||||||||    
T  165 acaacaactcaccatatcatcaccaa 140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 486 - 519
Target Start/End: Complemental strand, 150 - 117
Alignment:
Q  486 atcatcaccaaaatcatcaccaattggatatata 519  Q
    ||||||||||||||||||||||||||||||||||    
T  150 atcatcaccaaaatcatcaccaattggatatata 117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 162
Target Start/End: Complemental strand, 150 - 117
Alignment:
Q  129 atcatcaccaaaatcatcaccaattggatatata 162  Q
    ||||||||||||||||||||||||||||||||||    
T  150 atcatcaccaaaatcatcaccaattggatatata 117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0892 (Bit Score: 84; Significance: 2e-39; HSPs: 2)
Name: scaffold0892
Description:

Target: scaffold0892; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 185 - 344
Target Start/End: Original strand, 2530 - 2687
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaa 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||| ||||||||| |||| |||||| || ||    
T  2530 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccaaattctcaccaata-ttatttgcaattatacaatcaaaccaa 2628  T
Q  285 taattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactca 344  Q
    |||||||||||||| |  |||||||  | ||||||| ||| ||||||||||||| |||||    
T  2629 taattcatcaccacataaataatcatcatcatatcacaat-aacaatgtatatgaactca 2687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0892; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 542 - 685
Target Start/End: Original strand, 2530 - 2670
Alignment:
Q  542 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatatcatcaccaatattttatttacatttatgcaatcacatca 641  Q
    ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||| ||  |||||||||  |||||| || |||| |||||| | ||    
T  2530 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccaaattctcaccaata--ttatttgcaattatacaatcaaacca 2627  T
Q  642 ataattcatcaccacgtatataatcatacatcatgtcataataa 685  Q
    ||||||||||||||| || |||||||| |||||| ||| |||||    
T  2628 ataattcatcaccacataaataatcat-catcatatcacaataa 2670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0833 (Bit Score: 84; Significance: 2e-39; HSPs: 4)
Name: scaffold0833
Description:

Target: scaffold0833; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 129 - 292
Target Start/End: Original strand, 1836 - 1997
Alignment:
Q  129 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccac 228  Q
    ||||||||||| |||||||||| ||||||||||||| ||||  |||  || ||   |||||||||||||||||||||||||||||||||||||||| |||    
T  1836 atcatcaccaatatcatcaccatttggatatataaa-atattcgtctccatcagtcatgtatgcatgaacatatgactcaataataatgcatatgttcac 1934  T
Q  229 acaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcat 292  Q
    |||||||||||||| ||  ||||||||| ||||||||||||||||||||| || ||||||||||    
T  1935 acaacaactcaccaaattctcaccaata-ttatttgcatttatgcaatcacaccaataattcat 1997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0833; HSP #2
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 486 - 650
Target Start/End: Original strand, 1836 - 1997
Alignment:
Q  486 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcac 585  Q
    ||||||||||| |||||||||| ||||||||||||| ||||  |||  || ||   ||||||||||||||||||||||||| || |||||||||||||||    
T  1836 atcatcaccaatatcatcaccatttggatatataaa-atattcgtctccatcagtcatgtatgcatgaacatatgactcaataataatgcatatgttcac 1934  T
Q  586 acaacaactcaccatatcatcaccaatattttatttacatttatgcaatcacatcaataattcat 650  Q
    |||||||||||||| ||  |||||||||  |||||| |||||||||||||||| |||||||||||    
T  1935 acaacaactcaccaaattctcaccaata--ttatttgcatttatgcaatcacaccaataattcat 1997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0833; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 312 - 408
Target Start/End: Original strand, 2055 - 2151
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttgttcttattccaagcagag 408  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||   || ||||||||| |||||| | ||||||| ||  |||||||| ||||    
T  2055 accatatcataataaacaatatatatggattcaccaatatcatcaccttcatataatttcacgtcaaatacgtgatttgctcacattccaagtagag 2151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0833; HSP #4
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 677 - 730
Target Start/End: Original strand, 2061 - 2115
Alignment:
Q  677 tcataataaaca-tacacatggattcaccaatatcatcaccttctcataatttca 730  Q
    |||||||||||| || | ||||||||||||||||||||||||||  |||||||||    
T  2061 tcataataaacaatatatatggattcaccaatatcatcaccttcatataatttca 2115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 83; Significance: 6e-39; HSPs: 7)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 172 - 254
Target Start/End: Complemental strand, 24516 - 24434
Alignment:
Q  172 gtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaa 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24516 gtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaa 24434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #2
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 259 - 348
Target Start/End: Complemental strand, 24383 - 24294
Alignment:
Q  259 tatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcaccaa 348  Q
    |||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  24383 tatttgcatttatgcaatcacaccaataattcatcaccacttacataatcaataccatatcataataaacaatgtatatggactcaccaa 24294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #3
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 529 - 611
Target Start/End: Complemental strand, 24516 - 24434
Alignment:
Q  529 gtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatatcatcaccaa 611  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||    
T  24516 gtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaa 24434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 486 - 547
Target Start/End: Complemental strand, 24444 - 24381
Alignment:
Q  486 atcatcaccaaaatcatcaccaattggata--tataaacatatctgtcatcaccaaatatgtat 547  Q
    ||||||||||||||||||||||||||||||  |||||||||||| ||||||||| || ||||||    
T  24444 atcatcaccaaaatcatcaccaattggatatatataaacatatccgtcatcacccaacatgtat 24381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 24444 - 24381
Alignment:
Q  129 atcatcaccaaaatcatcaccaattggata--tataaacatatctgtcatcaccaaatatgtat 190  Q
    ||||||||||||||||||||||||||||||  |||||||||||| ||||||||| || ||||||    
T  24444 atcatcaccaaaatcatcaccaattggatatatataaacatatccgtcatcacccaacatgtat 24381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 312 - 356
Target Start/End: Complemental strand, 24263 - 24219
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatca 356  Q
    |||| |||||||||||||||||||||||| |||||||||||||||    
T  24263 accacatcataataaacaatgtatatggattcaccaatatcatca 24219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 617 - 688
Target Start/End: Complemental strand, 24383 - 24313
Alignment:
Q  617 tatttacatttatgcaatcacatcaataattcatcaccacgtatataatcatacatcatgtcataataaaca 688  Q
    ||||| |||||||||||||||| ||||||||||||||||| || ||||||| | | ||| ||||||||||||    
T  24383 tatttgcatttatgcaatcacaccaataattcatcaccacttacataatca-ataccatatcataataaaca 24313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 78; Significance: 6e-36; HSPs: 7)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 259 - 348
Target Start/End: Original strand, 34167 - 34256
Alignment:
Q  259 tatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcaccaa 348  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  34167 tatttgcatttatgcaatcacaccaataattcatcaccacttgcataatcaataccatatcataataaagaatgtatatggactcaccaa 34256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 34108 - 34169
Alignment:
Q  129 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtat 190  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||    
T  34108 atcatcaccaaaatcatcaccaattggatatataaacatatccatcatcaccaaacatgtat 34169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 486 - 547
Target Start/End: Original strand, 34108 - 34169
Alignment:
Q  486 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtat 547  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||    
T  34108 atcatcaccaaaatcatcaccaattggatatataaacatatccatcatcaccaaacatgtat 34169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 30159 - 30200
Alignment:
Q  129 atcatcaccaaaatcatcaccaattggatatataaacatatc 170  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  30159 atcatcaccaaaatcatcaccaattggatatataaacatatc 30200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 486 - 527
Target Start/End: Original strand, 30159 - 30200
Alignment:
Q  486 atcatcaccaaaatcatcaccaattggatatataaacatatc 527  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  30159 atcatcaccaaaatcatcaccaattggatatataaacatatc 30200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 312 - 356
Target Start/End: Original strand, 34287 - 34331
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatca 356  Q
    |||| |||||||||| ||||||||||||| |||||||||||||||    
T  34287 accacatcataataaccaatgtatatggattcaccaatatcatca 34331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 601 - 656
Target Start/End: Original strand, 34151 - 34206
Alignment:
Q  601 atcatcaccaatattttatttacatttatgcaatcacatcaataattcatcaccac 656  Q
    |||||||||||   | ||||| |||||||||||||||| |||||||||||||||||    
T  34151 atcatcaccaaacatgtatttgcatttatgcaatcacaccaataattcatcaccac 34206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 78; Significance: 6e-36; HSPs: 6)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 128 - 222
Target Start/End: Complemental strand, 67181 - 67085
Alignment:
Q  128 catcatcaccaaaat--catcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatat 222  Q
    |||||||||||||||  |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  67181 catcatcaccaaaatatcatcaccagttggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatat 67085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 485 - 579
Target Start/End: Complemental strand, 67181 - 67085
Alignment:
Q  485 catcatcaccaaaat--catcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatat 579  Q
    |||||||||||||||  |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||    
T  67181 catcatcaccaaaatatcatcaccagttggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatat 67085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 246 - 355
Target Start/End: Complemental strand, 51086 - 50979
Alignment:
Q  246 catcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcac 345  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||  | ||||||||||||||||||| ||| ||||||||||| || |||||    
T  51086 catcaccaatatttatttgcatttatgcaatcacaccaataattcatcacca-atacataatcaataccatatcacaat-aacaatgtatacgggctcac 50989  T
Q  346 caatatcatc 355  Q
    ||||||||||    
T  50988 caatatcatc 50979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 218 - 297
Target Start/End: Complemental strand, 51158 - 51079
Alignment:
Q  218 catatgtccacacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcacca 297  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| || |||||| ||||||||    
T  51158 catatgtccacacaacaactcaccaaatcatcaccaatatctatttgcatttatgcaatcacaccaataatccatcacca 51079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 575 - 655
Target Start/End: Complemental strand, 51158 - 51079
Alignment:
Q  575 catatgttcacacaacaactcaccatatcatcaccaatattttatttacatttatgcaatcacatcaataattcatcacca 655  Q
    ||||||| ||||||||||||||||| ||||||||||||| | ||||| |||||||||||||||| ||||||| ||||||||    
T  51158 catatgtccacacaacaactcaccaaatcatcaccaata-tctatttgcatttatgcaatcacaccaataatccatcacca 51079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 603 - 655
Target Start/End: Complemental strand, 51086 - 51035
Alignment:
Q  603 catcaccaatattttatttacatttatgcaatcacatcaataattcatcacca 655  Q
    |||||||||||||| |||| |||||||||||||||| ||||||||||||||||    
T  51086 catcaccaatattt-atttgcatttatgcaatcacaccaataattcatcacca 51035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 67; Significance: 2e-29; HSPs: 6)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 244 - 326
Target Start/End: Original strand, 17897 - 17979
Alignment:
Q  244 atcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataa 326  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||| | |||||||||||||||||||||||||||    
T  17897 atcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcacctcatgcataatcaataccatatcataataa 17979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 502 - 615
Target Start/End: Complemental strand, 9573 - 9460
Alignment:
Q  502 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccata 601  Q
    |||||| ||||||||||||| ||||| |||  || | |  ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  9573 tcaccatttggatatataaaaatatccgtctccatctatcatgtatgcatgaacatacgactcaacaacaatgcatatgttcacacaacaattcaccata 9474  T
Q  602 tcatcaccaatatt 615  Q
    |  |||||||||||    
T  9473 ttctcaccaatatt 9460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 145 - 258
Target Start/End: Complemental strand, 9573 - 9460
Alignment:
Q  145 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccata 244  Q
    |||||| ||||||||||||| ||||| |||  || | |  ||||||||||||||||| ||||||| || ||||||||||| |||||||||| ||||||||    
T  9573 tcaccatttggatatataaaaatatccgtctccatctatcatgtatgcatgaacatacgactcaacaacaatgcatatgttcacacaacaattcaccata 9474  T
Q  245 tcatcaccaatatt 258  Q
    |  |||||||||||    
T  9473 ttctcaccaatatt 9460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 312 - 403
Target Start/End: Complemental strand, 9371 - 9280
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttgttcttattccaag 403  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||   |  ||||||||||| || | ||||||||| ||  ||||||||    
T  9371 accatatcataataaacaatgtatatggattcaccaatatcatcaccttcacataatttcacattaatttcatgatttgctcacattccaag 9280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 601 - 654
Target Start/End: Original strand, 17897 - 17949
Alignment:
Q  601 atcatcaccaatattttatttacatttatgcaatcacatcaataattcatcacc 654  Q
    |||||||||||||||| |||| |||||||||||||||| |||||||||||||||    
T  17897 atcatcaccaatattt-atttgcatttatgcaatcacaccaataattcatcacc 17949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 694 - 730
Target Start/End: Complemental strand, 9347 - 9311
Alignment:
Q  694 atggattcaccaatatcatcaccttctcataatttca 730  Q
    |||||||||||||||||||||||||| ||||||||||    
T  9347 atggattcaccaatatcatcaccttcacataatttca 9311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 66; Significance: 9e-29; HSPs: 4)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 542 - 615
Target Start/End: Complemental strand, 7467 - 7394
Alignment:
Q  542 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatatcatcaccaatatt 615  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  7467 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatattctcaccaatatt 7394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 185 - 258
Target Start/End: Complemental strand, 7467 - 7394
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaatatt 258  Q
    ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||  |||||||||||    
T  7467 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatattctcaccaatatt 7394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 316 - 390
Target Start/End: Complemental strand, 7304 - 7230
Alignment:
Q  316 tatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttg 390  Q
    ||||||||||||||||||||||||| |||||||||||||||||   |  |||||||||||||| | |||||||||    
T  7304 tatcataataaacaatgtatatggattcaccaatatcatcaccttcacataatttcacatcaattacatgatttg 7230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 694 - 735
Target Start/End: Complemental strand, 7284 - 7243
Alignment:
Q  694 atggattcaccaatatcatcaccttctcataatttcatatca 735  Q
    |||||||||||||||||||||||||| |||||||||| ||||    
T  7284 atggattcaccaatatcatcaccttcacataatttcacatca 7243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 66; Significance: 9e-29; HSPs: 4)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 542 - 615
Target Start/End: Original strand, 12536 - 12609
Alignment:
Q  542 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatatcatcaccaatatt 615  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  12536 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatattctcaccaatatt 12609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 185 - 258
Target Start/End: Original strand, 12536 - 12609
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaatatt 258  Q
    ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||  |||||||||||    
T  12536 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatattctcaccaatatt 12609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 312 - 390
Target Start/End: Original strand, 12698 - 12776
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttg 390  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||   |  |||||||||||||| | |||||||||    
T  12698 accatatcataataaacaatgtatatggattcaccaatatcatcacctgcacataatttcacatcaattacatgatttg 12776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 694 - 735
Target Start/End: Original strand, 12722 - 12763
Alignment:
Q  694 atggattcaccaatatcatcaccttctcataatttcatatca 735  Q
    |||||||||||||||||||||||| | |||||||||| ||||    
T  12722 atggattcaccaatatcatcacctgcacataatttcacatca 12763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 62; Significance: 2e-26; HSPs: 4)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 542 - 615
Target Start/End: Complemental strand, 167670 - 167597
Alignment:
Q  542 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatatcatcaccaatatt 615  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||    
T  167670 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccattttctcaccaatatt 167597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 185 - 258
Target Start/End: Complemental strand, 167670 - 167597
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaatatt 258  Q
    ||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||| |  |||||||||||    
T  167670 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccattttctcaccaatatt 167597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 316 - 403
Target Start/End: Complemental strand, 167506 - 167419
Alignment:
Q  316 tatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttgttcttattccaag 403  Q
    ||||||||||||||||||||||||| |||||||||||||||||   |  |||||||||||||| | ||||||||| ||  ||||||||    
T  167506 tatcataataaacaatgtatatggattcaccaatatcatcaccttcacataatttcacatcaattacatgatttgctcacattccaag 167419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 694 - 735
Target Start/End: Complemental strand, 167486 - 167445
Alignment:
Q  694 atggattcaccaatatcatcaccttctcataatttcatatca 735  Q
    |||||||||||||||||||||||||| |||||||||| ||||    
T  167486 atggattcaccaatatcatcaccttcacataatttcacatca 167445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 132 - 242
Target Start/End: Original strand, 42445 - 42554
Alignment:
Q  132 atcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacaca 231  Q
    ||||||||||||||||||| || ||||| |||| |||||  ||  || ||   |||||||||||||||||||||||||||||||||||||||||||||||    
T  42445 atcaccaaaatcatcaccatttagatatgtaaa-atatccatctccatcagtcatgtatgcatgaacatatgactcaataataatgcatatgtccacaca 42543  T
Q  232 acaactcacca 242  Q
    |||||||||||    
T  42544 acaactcacca 42554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 489 - 599
Target Start/End: Original strand, 42445 - 42554
Alignment:
Q  489 atcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcacaca 588  Q
    ||||||||||||||||||| || ||||| |||| |||||  ||  || ||   ||||||||||||||||||||||||| || ||||||||||| ||||||    
T  42445 atcaccaaaatcatcaccatttagatatgtaaa-atatccatctccatcagtcatgtatgcatgaacatatgactcaataataatgcatatgtccacaca 42543  T
Q  589 acaactcacca 599  Q
    |||||||||||    
T  42544 acaactcacca 42554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 55; Significance: 3e-22; HSPs: 7)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 502 - 599
Target Start/End: Original strand, 27918 - 28016
Alignment:
Q  502 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcacca 599  Q
    |||||| ||||||||||||| ||||| |||  || ||   |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  27918 tcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 28016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 502 - 599
Target Start/End: Original strand, 39914 - 40012
Alignment:
Q  502 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcacca 599  Q
    |||||| ||||||||||||| ||||| |||  || ||   |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  39914 tcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 40012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 145 - 242
Target Start/End: Original strand, 27918 - 28016
Alignment:
Q  145 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 242  Q
    |||||| ||||||||||||| ||||| |||  || ||   ||||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||    
T  27918 tcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 28016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 145 - 242
Target Start/End: Original strand, 39914 - 40012
Alignment:
Q  145 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 242  Q
    |||||| ||||||||||||| ||||| |||  || ||   ||||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||    
T  39914 tcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 40012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 312 - 356
Target Start/End: Original strand, 28214 - 28258
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatca 356  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  28214 accatatcataataaacaatgtatatggattcaccaatatcatca 28258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 312 - 356
Target Start/End: Original strand, 40210 - 40254
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatca 356  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  40210 accatatcataataaacaatgtatatggattcaccaatatcatca 40254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 503 - 569
Target Start/End: Original strand, 26904 - 26970
Alignment:
Q  503 caccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaa 569  Q
    ||||| ||||||||||||| ||||| ||| ||| ||   ||||||||| ||||||||||||||||||    
T  26904 caccatttggatatataaaaatatccgtcctcatcagtcatgtatgcacgaacatatgactcaacaa 26970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 52; Significance: 2e-20; HSPs: 5)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 509 - 599
Target Start/End: Original strand, 23472 - 23563
Alignment:
Q  509 ttggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcacca 599  Q
    ||||||||||||| ||||| |||  || ||   |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  23472 ttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 23563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 312 - 403
Target Start/End: Original strand, 23755 - 23846
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttgttcttattccaag 403  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||   |  |||||||||||||| | ||||||||| ||  ||||||||    
T  23755 accatatcataataaacaatgtatatggattcaccaatatcatcaccttcacataatttcacatcaattacatgatttgctcacattccaag 23846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 152 - 242
Target Start/End: Original strand, 23472 - 23563
Alignment:
Q  152 ttggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 242  Q
    ||||||||||||| ||||| |||  || ||   ||||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||    
T  23472 ttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 23563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 542 - 615
Target Start/End: Original strand, 23594 - 23668
Alignment:
Q  542 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcaccatatcatcaccaatatt 615  Q
    |||||||||| |||||||  |||||||||||| |||||||||| || ||||| |||||||||  |||||||||||    
T  23594 atgtatgcataaacatatatctcaacaacaatacatatgttcatacaaacaattcaccatattctcaccaatatt 23668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 694 - 735
Target Start/End: Original strand, 23779 - 23820
Alignment:
Q  694 atggattcaccaatatcatcaccttctcataatttcatatca 735  Q
    |||||||||||||||||||||||||| |||||||||| ||||    
T  23779 atggattcaccaatatcatcaccttcacataatttcacatca 23820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 497 - 602
Target Start/End: Complemental strand, 9623 - 9517
Alignment:
Q  497 aatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactc 595  Q
    ||||||||||| ||||||||||||| ||||   ||  || ||   |||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||    
T  9623 aatcatcaccatttggatatataaaaatatacatctccatcagtcatgtatgcatgaacgtatgactcaacgacaatgcatatgttcacacaaacaactc 9524  T
Q  596 accatat 602  Q
    |||||||    
T  9523 accatat 9517  T

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Target: scaffold0335; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 245
Target Start/End: Complemental strand, 9623 - 9517
Alignment:
Q  140 aatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactc 238  Q
    ||||||||||| ||||||||||||| ||||   ||  || ||   |||||||||||||| ||||||||||  | ||||||||||| ||||| ||||||||    
T  9623 aatcatcaccatttggatatataaaaatatacatctccatcagtcatgtatgcatgaacgtatgactcaacgacaatgcatatgttcacacaaacaactc 9524  T
Q  239 accatat 245  Q
    |||||||    
T  9523 accatat 9517  T

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Target: scaffold0005 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 607
Target Start/End: Complemental strand, 247333 - 247267
Alignment:
Q  542 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacac-aacaactcaccatatcatca 607  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||| |||||||    
T  247333 atgtatgcatgaacatatgactcaacaacaatgcatatgtccacacaaacaattcaccacatcatca 247267  T

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Target: scaffold0005; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 250
Target Start/End: Complemental strand, 247333 - 247267
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcaccatatcatca 250  Q
    ||||||||||||||||||||||||| || ||||||||||||||||| ||||| |||||| |||||||    
T  247333 atgtatgcatgaacatatgactcaacaacaatgcatatgtccacacaaacaattcaccacatcatca 247267  T

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Target: scaffold0165 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 546 - 589
Target Start/End: Original strand, 20754 - 20797
Alignment:
Q  546 atgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  20754 atgcatgaacatatgactcaacaacaatgcatatgttcacacaa 20797  T

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Target: scaffold0165; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 546 - 589
Target Start/End: Original strand, 28738 - 28781
Alignment:
Q  546 atgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  28738 atgcatgaacatatgactcgacaacaatgcatatgttcacacaa 28781  T

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Target: scaffold0165; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 232
Target Start/End: Original strand, 20754 - 20797
Alignment:
Q  189 atgcatgaacatatgactcaataataatgcatatgtccacacaa 232  Q
    ||||||||||||||||||||| || ||||||||||| |||||||    
T  20754 atgcatgaacatatgactcaacaacaatgcatatgttcacacaa 20797  T

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Target: scaffold0361 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 312 - 354
Target Start/End: Original strand, 2620 - 2662
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcat 354  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  2620 accatatcataataaacaatgtatatggactcaccaatatcat 2662  T

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Target: scaffold0133 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 537 - 589
Target Start/End: Complemental strand, 3255 - 3203
Alignment:
Q  537 caaatatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    |||| ||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  3255 caaacatgaatgcatgaacatatgactctacaacaatgcatatgttcacacaa 3203  T

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Target: scaffold1427 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold1427
Description:

Target: scaffold1427; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 312 - 391
Target Start/End: Original strand, 1408 - 1487
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttgt 391  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||  ||  ||||||||||||| ||  |||||||||    
T  1408 accatatcataataaacaatgtatatcgatacaccaatatcatcacccttacataatttcacatcagatatatgatttgt 1487  T

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Target: scaffold0409 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 546 - 589
Target Start/End: Complemental strand, 2675 - 2632
Alignment:
Q  546 atgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  2675 atgcatgaacatatgactcgacaacaatgcatatgttcacacaa 2632  T

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Target: scaffold0409; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 546 - 589
Target Start/End: Complemental strand, 10930 - 10887
Alignment:
Q  546 atgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  10930 atgcatgaacatatgactcgacaacaatgcatatgttcacacaa 10887  T

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Target: scaffold0148 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 546 - 589
Target Start/End: Original strand, 36530 - 36573
Alignment:
Q  546 atgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  36530 atgcatgaacatatgactcgacaacaatgcatatgttcacacaa 36573  T

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Target: scaffold0329 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0329
Description:

Target: scaffold0329; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 586
Target Start/End: Original strand, 1809 - 1849
Alignment:
Q  546 atgcatgaacatatgactcaacaacaatgcatatgttcaca 586  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  1809 atgcatgaacatatgactcaacaacaatgcatatattcaca 1849  T

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Target: scaffold1068 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold1068
Description:

Target: scaffold1068; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 546 - 589
Target Start/End: Original strand, 1881 - 1924
Alignment:
Q  546 atgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  1881 atgcatgaacatatgacttgacaacaatgcatatgttcacacaa 1924  T

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Target: scaffold0700 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 546 - 589
Target Start/End: Original strand, 1221 - 1264
Alignment:
Q  546 atgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    |||||||||||||||| || ||||||||||||||||||||||||    
T  1221 atgcatgaacatatgagtcgacaacaatgcatatgttcacacaa 1264  T

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Target: scaffold0020 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 546 - 589
Target Start/End: Original strand, 104581 - 104624
Alignment:
Q  546 atgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  104581 atgcatgaacatatgactcgacaagaatgcatatgttcacacaa 104624  T

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Target: scaffold0009 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 546 - 589
Target Start/End: Complemental strand, 98523 - 98479
Alignment:
Q  546 atgcatgaacatatgactcaacaac-aatgcatatgttcacacaa 589  Q
    |||| |||||||||||||||||||| |||||||||||||||||||    
T  98523 atgcgtgaacatatgactcaacaacaaatgcatatgttcacacaa 98479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 546 - 599
Target Start/End: Complemental strand, 4303 - 4248
Alignment:
Q  546 atgcatgaacatatgactcaacaac-aatgcatatgttcacac-aacaactcacca 599  Q
    ||||||||||||||||||||||||| |||||||||||| |||| ||||| ||||||    
T  4303 atgcatgaacatatgactcaacaacaaatgcatatgtttacactaacaattcacca 4248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 546 - 589
Target Start/End: Original strand, 10242 - 10285
Alignment:
Q  546 atgcatgaacatatgactcaacaacaatgcatatgttcacacaa 589  Q
    ||||||| ||||||||||| ||||||||||||||||||| ||||    
T  10242 atgcatggacatatgactcgacaacaatgcatatgttcatacaa 10285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 312 - 375
Target Start/End: Complemental strand, 36590 - 36527
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacat 375  Q
    |||| ||||||||||||||||||||| ||  ||||||||||||||||  ||  |||||||||||    
T  36590 accaaatcataataaacaatgtatatcgatacaccaatatcatcacctttacataatttcacat 36527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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