View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0760_low_21 (Length: 390)

Name: NF0760_low_21
Description: NF0760
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0760_low_21
NF0760_low_21
[»] scaffold0410 (1 HSPs)
scaffold0410 (21-113)||(14879-14971)
[»] chr7 (43 HSPs)
chr7 (21-113)||(2531284-2531376)
chr7 (21-113)||(2833433-2833525)
chr7 (22-113)||(15083262-15083353)
chr7 (21-104)||(31760-31843)
chr7 (21-104)||(12706083-12706166)
chr7 (21-104)||(12713575-12713658)
chr7 (21-104)||(12722233-12722316)
chr7 (21-104)||(16908470-16908553)
chr7 (22-113)||(39721232-39721323)
chr7 (22-113)||(7520167-7520258)
chr7 (21-104)||(12717322-12717405)
chr7 (21-104)||(18278029-18278112)
chr7 (21-104)||(18281993-18282076)
chr7 (22-112)||(25928325-25928414)
chr7 (22-110)||(20486778-20486864)
chr7 (22-112)||(10607275-10607363)
chr7 (21-113)||(45171463-45171544)
chr7 (22-83)||(26291193-26291254)
chr7 (345-390)||(26291492-26291537)
chr7 (331-390)||(32223-32282)
chr7 (331-390)||(71740-71799)
chr7 (331-390)||(75849-75908)
chr7 (331-390)||(12705600-12705659)
chr7 (331-390)||(12714038-12714097)
chr7 (22-112)||(16582457-16582545)
chr7 (331-390)||(18278557-18278616)
chr7 (331-390)||(18282520-18282579)
chr7 (22-103)||(18301387-18301466)
chr7 (345-390)||(16113489-16113534)
chr7 (345-390)||(16116642-16116687)
chr7 (345-390)||(18424783-18424828)
chr7 (331-390)||(12717862-12717921)
chr7 (331-390)||(12722773-12722832)
chr7 (348-390)||(16908144-16908186)
chr7 (64-104)||(72343-72383)
chr7 (64-104)||(76452-76492)
chr7 (22-97)||(9752477-9752550)
chr7 (22-77)||(39268301-39268356)
chr7 (22-74)||(11660318-11660370)
chr7 (22-74)||(13891666-13891718)
chr7 (24-104)||(1859983-1860062)
chr7 (24-104)||(13919374-13919453)
chr7 (22-70)||(13892049-13892097)
[»] chr2 (21 HSPs)
chr2 (21-113)||(31343952-31344044)
chr2 (21-104)||(12902567-12902650)
chr2 (21-104)||(24630008-24630091)
chr2 (21-104)||(24645186-24645269)
chr2 (21-104)||(24647962-24648045)
chr2 (21-104)||(27600406-27600489)
chr2 (21-104)||(30346618-30346701)
chr2 (21-104)||(10103257-10103340)
chr2 (21-104)||(27380954-27381037)
chr2 (21-104)||(27384924-27385007)
chr2 (21-113)||(41532405-41532486)
chr2 (22-112)||(9784030-9784118)
chr2 (331-390)||(12902318-12902377)
chr2 (331-390)||(24629412-24629471)
chr2 (331-390)||(27600946-27601005)
chr2 (331-390)||(30345948-30346007)
chr2 (331-390)||(10102741-10102800)
chr2 (331-390)||(24648469-24648528)
chr2 (331-390)||(27384331-27384390)
chr2 (331-390)||(27380285-27380344)
chr2 (21-55)||(24647129-24647163)
[»] chr8 (20 HSPs)
chr8 (21-113)||(14399044-14399136)
chr8 (22-113)||(21409937-21410028)
chr8 (22-113)||(21804429-21804520)
chr8 (21-104)||(21974144-21974227)
chr8 (21-104)||(21978254-21978337)
chr8 (21-104)||(43250237-43250320)
chr8 (329-390)||(15924188-15924249)
chr8 (22-112)||(23913301-23913389)
chr8 (22-112)||(44385788-44385876)
chr8 (21-113)||(18864067-18864148)
chr8 (21-113)||(30941527-30941608)
chr8 (331-390)||(21977565-21977624)
chr8 (331-390)||(22111165-22111224)
chr8 (22-112)||(23427862-23427950)
chr8 (329-390)||(21386557-21386618)
chr8 (345-390)||(21973474-21973519)
chr8 (22-104)||(21386195-21386275)
chr8 (331-390)||(43250925-43250984)
chr8 (21-104)||(21829432-21829504)
chr8 (64-104)||(22110668-22110708)
[»] chr3 (51 HSPs)
chr3 (21-113)||(5219882-5219974)
chr3 (21-113)||(11853741-11853833)
chr3 (21-113)||(14664460-14664552)
chr3 (22-113)||(37440632-37440723)
chr3 (21-113)||(11301617-11301709)
chr3 (21-113)||(14667624-14667716)
chr3 (21-104)||(7108273-7108356)
chr3 (21-104)||(7112208-7112291)
chr3 (21-104)||(11068648-11068731)
chr3 (21-104)||(22320164-22320247)
chr3 (21-104)||(22335219-22335302)
chr3 (21-104)||(55021411-55021494)
chr3 (21-104)||(11167054-11167137)
chr3 (21-104)||(14497982-14498065)
chr3 (21-104)||(28948496-28948579)
chr3 (21-104)||(15616212-15616295)
chr3 (329-390)||(27410857-27410918)
chr3 (22-112)||(16795539-16795627)
chr3 (332-390)||(17318069-17318127)
chr3 (329-390)||(8490005-8490066)
chr3 (64-113)||(15963564-15963613)
chr3 (64-113)||(15967488-15967537)
chr3 (64-113)||(15971412-15971461)
chr3 (345-390)||(16751502-16751547)
chr3 (22-83)||(18933337-18933398)
chr3 (22-83)||(30064421-30064482)
chr3 (331-390)||(4108172-4108231)
chr3 (331-390)||(4112024-4112083)
chr3 (331-390)||(4589774-4589833)
chr3 (331-390)||(7108813-7108872)
chr3 (331-390)||(7112748-7112807)
chr3 (331-390)||(11069265-11069324)
chr3 (331-390)||(11166461-11166520)
chr3 (22-104)||(12853326-12853406)
chr3 (331-390)||(14498522-14498581)
chr3 (331-390)||(22320781-22320840)
chr3 (331-390)||(22335836-22335895)
chr3 (331-390)||(55022102-55022161)
chr3 (345-390)||(19774658-19774703)
chr3 (22-104)||(17318472-17318552)
chr3 (331-390)||(30064965-30065024)
chr3 (22-103)||(4590124-4590203)
chr3 (22-112)||(14670062-14670147)
chr3 (64-104)||(4108760-4108800)
chr3 (64-104)||(4112609-4112649)
chr3 (21-80)||(12337291-12337348)
chr3 (331-387)||(28948959-28949015)
chr3 (22-104)||(14068025-14068105)
chr3 (24-104)||(15463916-15463995)
chr3 (22-71)||(10834935-10834984)
chr3 (22-74)||(13435854-13435906)
[»] chr1 (20 HSPs)
chr1 (21-113)||(33796068-33796160)
chr1 (21-104)||(1009297-1009380)
chr1 (21-104)||(1926756-1926839)
chr1 (21-104)||(16376776-16376859)
chr1 (21-104)||(20925770-20925853)
chr1 (21-104)||(52634303-52634386)
chr1 (22-112)||(22132053-22132141)
chr1 (331-390)||(41389220-41389279)
chr1 (22-83)||(20230120-20230181)
chr1 (345-390)||(39244772-39244817)
chr1 (345-390)||(39248327-39248372)
chr1 (331-390)||(1009837-1009896)
chr1 (331-390)||(1926086-1926145)
chr1 (331-390)||(16376337-16376396)
chr1 (331-390)||(20925100-20925159)
chr1 (22-112)||(41801233-41801321)
chr1 (331-390)||(52634908-52634967)
chr1 (22-104)||(21406289-21406369)
chr1 (350-390)||(20229828-20229868)
chr1 (358-390)||(21406609-21406641)
[»] chr5 (18 HSPs)
chr5 (21-112)||(18354832-18354923)
chr5 (21-104)||(19474133-19474216)
chr5 (21-104)||(20294549-20294632)
chr5 (21-106)||(24768521-24768606)
chr5 (21-104)||(40727362-40727443)
chr5 (21-104)||(20912215-20912296)
chr5 (21-112)||(22108404-22108493)
chr5 (331-390)||(40724468-40724527)
chr5 (21-113)||(11219590-11219671)
chr5 (21-113)||(11227998-11228079)
chr5 (21-104)||(15238080-15238161)
chr5 (331-390)||(19473617-19473676)
chr5 (331-390)||(20295015-20295074)
chr5 (21-113)||(11224176-11224257)
chr5 (21-113)||(11229988-11230069)
chr5 (22-112)||(22120546-22120634)
chr5 (21-105)||(11226192-11226265)
chr5 (331-390)||(10752150-10752209)
[»] chr4 (34 HSPs)
chr4 (22-113)||(20158399-20158490)
chr4 (21-113)||(20163850-20163942)
chr4 (21-113)||(20161075-20161167)
chr4 (21-104)||(9555104-9555187)
chr4 (21-104)||(14758952-14759035)
chr4 (21-104)||(14955720-14955803)
chr4 (21-104)||(17807089-17807172)
chr4 (21-104)||(25688477-25688560)
chr4 (21-97)||(5758423-5758499)
chr4 (21-104)||(4562734-4562817)
chr4 (21-104)||(33740871-33740954)
chr4 (22-110)||(10711861-10711949)
chr4 (22-110)||(10925631-10925719)
chr4 (21-104)||(12486306-12486386)
chr4 (22-112)||(17052400-17052488)
chr4 (23-112)||(12422980-12423067)
chr4 (329-390)||(27533043-27533104)
chr4 (22-104)||(23996929-23997009)
chr4 (331-390)||(25689017-25689076)
chr4 (22-103)||(631711-631790)
chr4 (331-388)||(33741414-33741471)
chr4 (22-97)||(22634896-22634969)
chr4 (331-390)||(4562218-4562277)
chr4 (331-390)||(5757743-5757802)
chr4 (331-390)||(9555644-9555703)
chr4 (331-390)||(14758359-14758418)
chr4 (331-390)||(14955124-14955183)
chr4 (331-390)||(17807282-17807341)
chr4 (345-390)||(15223981-15224026)
chr4 (347-390)||(12486815-12486858)
chr4 (22-104)||(27532788-27532868)
chr4 (22-77)||(13813820-13813875)
chr4 (22-77)||(13818308-13818363)
chr4 (22-74)||(24048375-24048427)
[»] scaffold1852 (1 HSPs)
scaffold1852 (21-113)||(772-864)
[»] chr6 (40 HSPs)
chr6 (21-113)||(27555574-27555666)
chr6 (21-104)||(8242447-8242530)
chr6 (21-104)||(11565436-11565519)
chr6 (21-104)||(12620294-12620377)
chr6 (21-104)||(23988338-23988421)
chr6 (21-113)||(22075338-22075434)
chr6 (21-104)||(22861790-22861873)
chr6 (21-97)||(11716908-11716984)
chr6 (329-390)||(18953140-18953201)
chr6 (329-390)||(23401009-23401070)
chr6 (21-104)||(14470916-14470997)
chr6 (22-112)||(2076322-2076410)
chr6 (331-390)||(22948231-22948290)
chr6 (331-390)||(22952187-22952246)
chr6 (331-390)||(23870675-23870734)
chr6 (331-390)||(23874631-23874690)
chr6 (21-113)||(19869222-19869303)
chr6 (21-113)||(23393676-23393757)
chr6 (21-113)||(23413584-23413665)
chr6 (345-390)||(1643670-1643715)
chr6 (331-388)||(12619777-12619834)
chr6 (345-390)||(16623264-16623309)
chr6 (345-390)||(18918308-18918353)
chr6 (331-390)||(8242988-8243047)
chr6 (331-390)||(11565976-11566035)
chr6 (331-390)||(16759351-16759410)
chr6 (331-390)||(19869743-19869802)
chr6 (331-390)||(22862060-22862119)
chr6 (331-390)||(23394182-23394241)
chr6 (331-390)||(23989074-23989133)
chr6 (349-390)||(14471426-14471467)
chr6 (22-83)||(23400714-23400775)
chr6 (22-83)||(18918562-18918623)
chr6 (21-104)||(22947702-22947774)
chr6 (21-104)||(22951658-22951730)
chr6 (21-104)||(23870146-23870218)
chr6 (21-104)||(23874102-23874174)
chr6 (331-390)||(31479149-31479208)
chr6 (22-83)||(18953465-18953526)
chr6 (64-104)||(16758782-16758822)
[»] scaffold0486 (1 HSPs)
scaffold0486 (21-113)||(8612-8704)
[»] scaffold0023 (1 HSPs)
scaffold0023 (22-113)||(11813-11904)
[»] scaffold0372 (2 HSPs)
scaffold0372 (21-104)||(6281-6364)
scaffold0372 (331-390)||(5952-6011)
[»] scaffold0349 (2 HSPs)
scaffold0349 (21-96)||(11086-11161)
scaffold0349 (331-390)||(11616-11675)
[»] scaffold0061 (2 HSPs)
scaffold0061 (25-104)||(68516-68595)
scaffold0061 (331-390)||(68113-68172)
[»] scaffold0166 (1 HSPs)
scaffold0166 (21-106)||(11018-11103)
[»] scaffold0109 (2 HSPs)
scaffold0109 (329-390)||(36890-36951)
scaffold0109 (22-83)||(37179-37240)
[»] scaffold0028 (1 HSPs)
scaffold0028 (21-104)||(60285-60369)
[»] scaffold0293 (1 HSPs)
scaffold0293 (22-112)||(21293-21382)
[»] scaffold0157 (2 HSPs)
scaffold0157 (21-104)||(34091-34171)
scaffold0157 (347-390)||(33619-33662)
[»] scaffold0575 (1 HSPs)
scaffold0575 (22-112)||(6915-7003)
[»] scaffold0525 (2 HSPs)
scaffold0525 (21-83)||(5512-5574)
scaffold0525 (331-390)||(4791-4850)
[»] scaffold0141 (1 HSPs)
scaffold0141 (21-113)||(15537-15618)
[»] scaffold0029 (4 HSPs)
scaffold0029 (329-390)||(62459-62520)
scaffold0029 (329-390)||(66375-66436)
scaffold0029 (331-390)||(79687-79746)
scaffold0029 (22-83)||(62821-62882)
[»] scaffold0124 (1 HSPs)
scaffold0124 (22-104)||(25530-25610)
[»] scaffold0200 (1 HSPs)
scaffold0200 (64-113)||(10834-10883)
[»] scaffold0142 (1 HSPs)
scaffold0142 (22-112)||(8694-8782)
[»] scaffold0013 (1 HSPs)
scaffold0013 (22-112)||(74286-74374)
[»] scaffold0299 (1 HSPs)
scaffold0299 (21-80)||(5860-5917)
[»] scaffold0380 (1 HSPs)
scaffold0380 (22-104)||(4010-4090)
[»] scaffold0327 (1 HSPs)
scaffold0327 (22-112)||(18859-18947)
[»] scaffold0080 (2 HSPs)
scaffold0080 (23-74)||(28509-28560)
scaffold0080 (23-74)||(33974-34025)
[»] scaffold0031 (1 HSPs)
scaffold0031 (22-72)||(37195-37245)


Alignment Details
Target: scaffold0410 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 21 - 113
Target Start/End: Original strand, 14879 - 14971
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctcac 113  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  14879 acatcatcaagtacacttaacaactcatagatatcttcatgtaatcatcatcactaataactttaaaacaacacaatgtaatcaacatctcac 14971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 5e-38; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 21 - 113
Target Start/End: Complemental strand, 2531376 - 2531284
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctcac 113  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  2531376 acatcatcaagtacacctaacaactcatagatatcttcatataatcatcatcactaataactttaaaacaacacaatgtaatcaacatctcac 2531284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 21 - 113
Target Start/End: Complemental strand, 2833525 - 2833433
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctcac 113  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  2833525 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatcaacatctcac 2833433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 22 - 113
Target Start/End: Original strand, 15083262 - 15083353
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctcac 113  Q
    ||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  15083262 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatcaacatctcac 15083353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 31760 - 31843
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  31760 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 31843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 12706166 - 12706083
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  12706166 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 12706083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 12713575 - 12713658
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  12713575 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 12713658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 12722233 - 12722316
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  12722233 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 12722316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 16908553 - 16908470
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  16908553 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 16908470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 22 - 113
Target Start/End: Original strand, 39721232 - 39721323
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctcac 113  Q
    ||||||||||||||  |||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  39721232 catcatcaagtacatttaacaactcatagatatcatcatgtaatcatcattactaataactttaaaacaacacaatgtaatcaacatctcac 39721323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 22 - 113
Target Start/End: Complemental strand, 7520258 - 7520167
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctcac 113  Q
    ||||||||||||||  |||||||||||||||| | | ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  7520258 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactgataactttaaaacaacacaatgtaatcaacatctcac 7520167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 12717322 - 12717405
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||| ||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  12717322 acatcagcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 12717405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 18278029 - 18278112
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||| ||||||    
T  18278029 acatcatcaagtacacttaacaactcatagatatcatcatgcaatcatcatcactaataactttaaaacaacacaatataatca 18278112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 18281993 - 18282076
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||| ||||||    
T  18281993 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaaaaactttaaaacaacacaatataatca 18282076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 22 - 112
Target Start/End: Complemental strand, 25928414 - 25928325
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctca 112  Q
    |||||| |||||||  |||||||||||||||| | | |||||||||||||||||||||||||| |||||||||||| |||||| |||||||    
T  25928414 catcataaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataacttt-aaacaacacaatataatcatcatctca 25928325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 110
Target Start/End: Original strand, 20486778 - 20486864
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatct 110  Q
    ||||||||||||||  |||||||||||||||| | | |||||||||||||||||||||||||  |||||||||||| |||||| |||||    
T  20486778 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatcatct 20486864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 112
Target Start/End: Complemental strand, 10607363 - 10607275
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctca 112  Q
    ||||||||||||||  |||||||||||||||| | | |||||||||||||||||||||| ||  |||||||||||| |||||| |||||||    
T  10607363 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcatcatctca 10607275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 113
Target Start/End: Complemental strand, 45171544 - 45171463
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctcac 113  Q
    |||||||||||||||| ||||||||||||||||||           ||||||||||||||||||||||||||||||| |||||||||||||||    
T  45171544 acatcatcaagtacacttaacaactcatagatatc-----------atcatcactaataactttaaaacaacacaatgtaatcaacatctcac 45171463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 26291193 - 26291254
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactt 83  Q
    ||||||||||||||| |||||||||||||||| | | |||||||||||||||||||||||||    
T  26291193 catcatcaagtacacttaacaactcatagataacatcatgtaatcatcatcactaataactt 26291254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 26291492 - 26291537
Alignment:
Q  345 acttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  26291492 acttaatagtaacaattatatacaacatcataacaacttaacaata 26291537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 32223 - 32282
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  32223 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 32282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Complemental strand, 71799 - 71740
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  71799 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 71740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Complemental strand, 75908 - 75849
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  75908 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 75849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Complemental strand, 12705659 - 12705600
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  12705659 acaacatattcataacttaatagtaacaattatacacaacatcataacaacttaacaata 12705600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 12714038 - 12714097
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  12714038 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 12714097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 16582457 - 16582545
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctca 112  Q
    ||||||||||||||  |||||||||||| ||| | | |||||||||||||||||||||| ||  |||||||||||| |||||| |||||||    
T  16582457 catcatcaagtacatttaacaactcataaataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcatcatctca 16582545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 18278557 - 18278616
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  18278557 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 18278616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 18282520 - 18282579
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  18282520 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 18282579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 18301387 - 18301466
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatc 103  Q
    ||||||||||||||  ||||||||| |||||| | | |||||||||||||||||||||||||  |||||||||||| |||||    
T  18301387 catcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatc 18301466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 16113489 - 16113534
Alignment:
Q  345 acttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  16113489 acttaatagtaacaattatacacaacatcataacaacttaacaata 16113534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 16116642 - 16116687
Alignment:
Q  345 acttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  16116642 acttaatagtaacaattatacacaacatcataacaacttaacaata 16116687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 18424783 - 18424828
Alignment:
Q  345 acttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  18424783 acttaataataacaattatatacaacatcataacaacttaacaata 18424828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 12717862 - 12717921
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| || ||||||||||||||||||||||    
T  12717862 acaacatattcatcacttaatagtaacaattatacacgacatcataacaacttaacaata 12717921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 12722773 - 12722832
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| || ||||||||||||||||||||||    
T  12722773 acaacatattcatcacttaatagtaacaattatacacgacatcataacaacttaacaata 12722832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 348 - 390
Target Start/End: Complemental strand, 16908186 - 16908144
Alignment:
Q  348 taatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  16908186 taatagtaacaattatacacaacatcataacaacttaacaata 16908144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 72383 - 72343
Alignment:
Q  64 atcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  72383 atcatcatcactaataactttaaaacaacacaatataatca 72343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 76492 - 76452
Alignment:
Q  64 atcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  76492 atcatcatcactaataactttaaaacaacacaatataatca 76452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 22 - 97
Target Start/End: Complemental strand, 9752550 - 9752477
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaat 97  Q
    ||||| ||||||||  |||||||||||||||| | | ||||||| |||||||||||||||||  ||||||||||||    
T  9752550 catcaccaagtacatttaacaactcatagataacatcatgtaattatcatcactaataactt--aaacaacacaat 9752477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 39268356 - 39268301
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaa 77  Q
    ||||||||||||||  |||||||||||||||| | | |||||||||||||||||||    
T  39268356 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaa 39268301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 11660318 - 11660370
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcac 74  Q
    ||||||||||||||  |||||||||||||||| | | ||||||||||||||||    
T  11660318 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcac 11660370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 13891666 - 13891718
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcac 74  Q
    ||||||||||||||  |||||||||||||||| | | ||||||||||||||||    
T  13891666 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcac 13891718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 104
Target Start/End: Complemental strand, 1860062 - 1859983
Alignment:
Q  24 tcatcaagtacacctaacaactcatagatatctttatgtaatcatc-atcactaataactttaaaacaacacaatttaatca 104  Q
    ||||||||||||  |||||||||||| ||| | |  |||||||||| ||||||||||||||  |||||||||||| ||||||    
T  1860062 tcatcaagtacatttaacaactcatatataacatcctgtaatcatcaatcactaataactt--aaacaacacaatataatca 1859983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 104
Target Start/End: Complemental strand, 13919453 - 13919374
Alignment:
Q  24 tcatcaagtacacctaacaactcatagatatctttatgtaatcatc-atcactaataactttaaaacaacacaatttaatca 104  Q
    ||||||||||||  |||||||||||| ||| | |  |||||||||| ||||||||||||||  |||||||||||| ||||||    
T  13919453 tcatcaagtacatttaacaactcatatataacatcctgtaatcatcaatcactaataactt--aaacaacacaatataatca 13919374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 13892049 - 13892097
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatca 70  Q
    ||||||||||||||  |||||||||||||||| | | ||||||||||||    
T  13892049 catcatcaagtacatttaacaactcatagataacatcatgtaatcatca 13892097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 5e-38; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 21 - 113
Target Start/End: Original strand, 31343952 - 31344044
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctcac 113  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  31343952 acatcatcaagtacacctaacaactcatagatatcttcatgtaatcatcatcactaataactttaaaacaacacaatgtaatcaatatctcac 31344044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 12902650 - 12902567
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  12902650 acatcatcaagtacacttaacaactcatagatatcattatgtaatcatcatcactaataactttaaaacaacacaatataatca 12902567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 24630091 - 24630008
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  24630091 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 24630008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 24645186 - 24645269
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  24645186 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 24645269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 24647962 - 24648045
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  24647962 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 24648045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 27600406 - 27600489
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  27600406 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 27600489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 30346701 - 30346618
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  30346701 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 30346618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 10103340 - 10103257
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| ||||||    
T  10103340 acatcatcaagtacacttaacaactcatagatatcaacatgtaatcatcatcactaataactttaaaacaacacaatataatca 10103257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 27381037 - 27380954
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||| || ||||||    
T  27381037 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacaccatataatca 27380954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 27385007 - 27384924
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||| || ||||||    
T  27385007 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacaccatataatca 27384924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 113
Target Start/End: Complemental strand, 41532486 - 41532405
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctcac 113  Q
    |||||||||||||||| ||||||||||||||||||           ||||||||||||||||||||||||||||||| |||||||||||||||    
T  41532486 acatcatcaagtacacttaacaactcatagatatc-----------atcatcactaataactttaaaacaacacaatgtaatcaacatctcac 41532405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 9784030 - 9784118
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctca 112  Q
    ||||||||||||||   ||||||||||||||| | | |||||||||||||||||||||||||  |||||||||||| |||| | |||||||    
T  9784030 catcatcaagtacattaaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataattatcatctca 9784118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Complemental strand, 12902377 - 12902318
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  12902377 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 12902318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Complemental strand, 24629471 - 24629412
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  24629471 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 24629412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 27600946 - 27601005
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  27600946 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 27601005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Complemental strand, 30346007 - 30345948
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  30346007 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 30345948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 331 - 390
Target Start/End: Complemental strand, 10102800 - 10102741
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||| ||||||||||||||||||    
T  10102800 acaacatattcatcacttaatagtaacaattatacacaacaacataacaacttaacaata 10102741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 24648469 - 24648528
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| ||||||||||||||| |||||||||    
T  24648469 acaacatattcatcacttaatagtaacaattatacacaacatcataacaatttaacaata 24648528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 331 - 390
Target Start/End: Complemental strand, 27384390 - 27384331
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | ||| |||||||||||||||| |||||||||||||||||||||||||    
T  27384390 acaacatattcatcactcaatagtaacaattatacacaacatcataacaacttaacaata 27384331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 331 - 390
Target Start/End: Complemental strand, 27380344 - 27380285
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | ||| ||||||||||||| || |||||||||||||||||||||||||    
T  27380344 acaacatattcatcactcaatagtaacaattgtacacaacatcataacaacttaacaata 27380285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 55
Target Start/End: Original strand, 24647129 - 24647163
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatc 55  Q
    |||||||||||||||| ||||||||||||||||||    
T  24647129 acatcatcaagtacacttaacaactcatagatatc 24647163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 1e-35; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 21 - 113
Target Start/End: Complemental strand, 14399136 - 14399044
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctcac 113  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  14399136 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatcaacatctcac 14399044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 22 - 113
Target Start/End: Original strand, 21409937 - 21410028
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctcac 113  Q
    ||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  21409937 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatcaacatctcac 21410028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 22 - 113
Target Start/End: Original strand, 21804429 - 21804520
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctcac 113  Q
    ||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  21804429 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatcaacatctcac 21804520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 21974227 - 21974144
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  21974227 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 21974144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 21978337 - 21978254
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  21978337 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 21978254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 43250237 - 43250320
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||| ||||||    
T  43250237 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcattaataactttaaaacaacacaatataatca 43250320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 329 - 390
Target Start/End: Complemental strand, 15924249 - 15924188
Alignment:
Q  329 gtacaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||    
T  15924249 gtacaacatattcatcacttaatagtaacaattatatacaacatcataacaacttaacaata 15924188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 23913301 - 23913389
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctca 112  Q
    ||||||||||||||  |||||||| ||||||| | | |||||||||||||||||||||||||  |||||||||||| |||||| |||||||    
T  23913301 catcatcaagtacatttaacaacttatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatcatctca 23913389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 112
Target Start/End: Complemental strand, 44385876 - 44385788
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctca 112  Q
    ||||||||||||||  |||||||||||||||| | | ||||||||||||||||||| |||||  |||||||||||| |||||| |||||||    
T  44385876 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaacaactt--aaacaacacaatataatcatcatctca 44385788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 113
Target Start/End: Complemental strand, 18864148 - 18864067
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctcac 113  Q
    |||||||||||||||| ||||||||||||||||||           ||||||||||||||||||||||||||||||| |||||||||||||||    
T  18864148 acatcatcaagtacacttaacaactcatagatatc-----------atcatcactaataactttaaaacaacacaatgtaatcaacatctcac 18864067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 113
Target Start/End: Complemental strand, 30941608 - 30941527
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctcac 113  Q
    |||||||||||||||| ||||||||||||||||||           ||||||||||||||||||||||||||||||| |||||||||||||||    
T  30941608 acatcatcaagtacacttaacaactcatagatatc-----------atcatcactaataactttaaaacaacacaatgtaatcaacatctcac 30941527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Complemental strand, 21977624 - 21977565
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  21977624 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 21977565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 22111165 - 22111224
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  22111165 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 22111224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 23427862 - 23427950
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctca 112  Q
    |||||| |||||||  |||||||||||||||| | | |||||||||||||||||||||||||  | |||||||||| |||||| |||||||    
T  23427862 catcattaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--agacaacacaatataatcatcatctca 23427950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 329 - 390
Target Start/End: Original strand, 21386557 - 21386618
Alignment:
Q  329 gtacaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||||| || | ||||||||||||||||||||||||||||||||||||| || |||||    
T  21386557 gtacaacatattcatcacttaatagtaacaattatatacaacatcataacaacatagcaata 21386618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 21973519 - 21973474
Alignment:
Q  345 acttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  21973519 acttaatagtaacaattatacacaacatcataacaacttaacaata 21973474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 21386195 - 21386275
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    ||||||||||||||  ||||||||| |||||| | | |||||||||||||||||||||||||  |||| ||||||| ||||||    
T  21386195 catcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataactt--aaactacacaatataatca 21386275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 43250925 - 43250984
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| ||||||||||||||| |||||||||    
T  43250925 acaacatattcatcacttaatagtaacaattatacacaacatcataacaatttaacaata 43250984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 21829504 - 21829432
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| ||||||||||||||||||           ||||||||||||||||||||||||||||||| ||||||    
T  21829504 acatcatcaagtacacttaacaactcatagatatc-----------atcatcactaataactttaaaacaacacaatataatca 21829432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 22110668 - 22110708
Alignment:
Q  64 atcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||||||||||||||||| ||| ||||||    
T  22110668 atcatcatcactaataactttaaaacaacataatataatca 22110708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 1e-35; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 21 - 113
Target Start/End: Original strand, 5219882 - 5219974
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctcac 113  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  5219882 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatcaacatctcac 5219974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 21 - 113
Target Start/End: Original strand, 11853741 - 11853833
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctcac 113  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  11853741 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatcaacatctcac 11853833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 21 - 113
Target Start/End: Original strand, 14664460 - 14664552
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctcac 113  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  14664460 acatcatcaagtacacttaacaactcatagatatcattatgtaatcatcatcactaataactttaaaacaacacaatgtaatcaacacctcac 14664552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 22 - 113
Target Start/End: Complemental strand, 37440723 - 37440632
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctcac 113  Q
    ||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  37440723 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatcaacatctcac 37440632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 21 - 113
Target Start/End: Complemental strand, 11301709 - 11301617
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctcac 113  Q
    |||||||||||||||| |||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  11301709 acatcatcaagtacacttaacaactcatagatatcatcatgcaatcatcatcactaataactttaaaacaacacaatgtaatcaacatctcac 11301617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 21 - 113
Target Start/End: Original strand, 14667624 - 14667716
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctcac 113  Q
    |||||||||||||||| ||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  14667624 acatcatcaagtacacttaacaactcatagatctcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatcaacatctcac 14667716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 7108273 - 7108356
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  7108273 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 7108356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 7112208 - 7112291
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  7112208 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 7112291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 11068648 - 11068731
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  11068648 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 11068731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 22320164 - 22320247
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  22320164 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 22320247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 22335219 - 22335302
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  22335219 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 22335302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 55021411 - 55021494
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  55021411 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 55021494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 11167137 - 11167054
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    ||||||||||||| || |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  11167137 acatcatcaagtaaacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 11167054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 14497982 - 14498065
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||| ||||||    
T  14497982 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcgctaataactttaaaacaacacaatataatca 14498065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 28948496 - 28948579
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  28948496 acatcatcaagtacacttaacaacttatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 28948579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 15616212 - 15616295
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    ||||| |||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| | ||||||    
T  15616212 acatcttcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacattataatca 15616295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 329 - 390
Target Start/End: Complemental strand, 27410918 - 27410857
Alignment:
Q  329 gtacaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  27410918 gtacaacatactcgtcacttaatagtaacaattatatacaacatcctaacaacttaacaata 27410857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 16795539 - 16795627
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctca 112  Q
    ||||||||||||||  |||||||||||||||| | | |||||||||||||||||||||||||  |||||||||||| |||||| |||||||    
T  16795539 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatcatctca 16795627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 332 - 390
Target Start/End: Complemental strand, 17318127 - 17318069
Alignment:
Q  332 caacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    ||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||    
T  17318127 caacatattcatcacttaatagtaacaattatatacaacatcataacaacttaacaata 17318069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 329 - 390
Target Start/End: Complemental strand, 8490066 - 8490005
Alignment:
Q  329 gtacaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||||| || | ||||||||||||||||||||||||||||||||||||| ||||||||    
T  8490066 gtacaacatattcatcacttaatagtaacaattatatacaacatcataacaacataacaata 8490005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 15963564 - 15963613
Alignment:
Q  64 atcatcatcactaataactttaaaacaacacaatttaatcaacatctcac 113  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  15963564 atcatcatcactaataactttaaaacaacacaatgtaatcaacatctcac 15963613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 15967488 - 15967537
Alignment:
Q  64 atcatcatcactaataactttaaaacaacacaatttaatcaacatctcac 113  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  15967488 atcatcatcactaataactttaaaacaacacaatgtaatcaacatctcac 15967537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 15971412 - 15971461
Alignment:
Q  64 atcatcatcactaataactttaaaacaacacaatttaatcaacatctcac 113  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  15971412 atcatcatcactaataactttaaaacaacacaatgtaatcaacatctcac 15971461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 16751547 - 16751502
Alignment:
Q  345 acttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  16751547 acttaatagtaacaattatatacaacatcataacaacttaacaata 16751502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 18933398 - 18933337
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactt 83  Q
    ||||||||||||||| |||||||||||||||| | | |||||||||||||||||||||||||    
T  18933398 catcatcaagtacacttaacaactcatagataacatcatgtaatcatcatcactaataactt 18933337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 30064421 - 30064482
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactt 83  Q
    ||||||||||||||| |||||||||||||||| | | |||||||||||||||||||||||||    
T  30064421 catcatcaagtacacttaacaactcatagataacatcatgtaatcatcatcactaataactt 30064482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Complemental strand, 4108231 - 4108172
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  4108231 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 4108172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Complemental strand, 4112083 - 4112024
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  4112083 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 4112024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Complemental strand, 4589833 - 4589774
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | ||||||||||||||||||||| ||||||||||||||||||||||||    
T  4589833 acaacataatcatcacttaatagtaacaattatatgcaacatcataacaacttaacaata 4589774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 7108813 - 7108872
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  7108813 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 7108872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 7112748 - 7112807
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  7112748 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 7112807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 11069265 - 11069324
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  11069265 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 11069324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Complemental strand, 11166520 - 11166461
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  11166520 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 11166461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 12853406 - 12853326
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    ||||||||||||||  |||||||||||||||| | | |||||||||||||||||||||| ||  |||||||||||| ||||||    
T  12853406 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatca 12853326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 14498522 - 14498581
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  14498522 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 14498581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 22320781 - 22320840
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  22320781 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 22320840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 22335836 - 22335895
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  22335836 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 22335895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 55022102 - 55022161
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  55022102 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 55022161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 19774658 - 19774703
Alignment:
Q  345 acttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  19774658 acttaatagtaacaattatatacagcatcataacaacttaacaata 19774703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 17318552 - 17318472
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    ||||||||||||||  ||||||||| |||||| ||| ||||| |||||||||||||||||||  |||| ||||||| ||||||    
T  17318552 catcatcaagtacatttaacaactcctagataacttcatgtattcatcatcactaataactt--aaactacacaatataatca 17318472  T

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Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 30064965 - 30065024
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  30064965 acaacataatcatcacttattagtaacaattatatgcaacatcataacaacttaacaata 30065024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 4590203 - 4590124
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatc 103  Q
    ||||||||||||||  ||||||||| |||||| | | |||||||||||||||||||||||||  |||| ||||||| |||||    
T  4590203 catcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataactt--aaactacacaatataatc 4590124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 14670062 - 14670147
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctca 112  Q
    ||||||||||||||  |||||||||||||||| | | |||||   |||||||||||||||||  |||||||||||| |||||| |||||||    
T  14670062 catcatcaagtacatttaacaactcatagataacatcatgta---atcatcactaataactt--aaacaacacaatataatcatcatctca 14670147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 4108800 - 4108760
Alignment:
Q  64 atcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  4108800 atcatcatcactaataactttaaaacaacacaatataatca 4108760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 4112649 - 4112609
Alignment:
Q  64 atcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  4112649 atcatcatcactaataactttaaaacaacacaatataatca 4112609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 12337291 - 12337348
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataa 80  Q
    |||||||||||||||| |||||||||||  ||||| | ||||||||||||||||||||||    
T  12337291 acatcatcaagtacacttaacaactcat--atatcatcatgtaatcatcatcactaataa 12337348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 331 - 387
Target Start/End: Original strand, 28948959 - 28949015
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaaca 387  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||| |||||    
T  28948959 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacataaca 28949015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 14068105 - 14068025
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    ||||||||| ||||  || |||||| |||||| | | |||||||||||||||||||||||||  |||| ||||||| ||||||    
T  14068105 catcatcaaatacatttagcaactcctagataacatcatgtaatcatcatcactaataactt--aaactacacaatataatca 14068025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 104
Target Start/End: Original strand, 15463916 - 15463995
Alignment:
Q  24 tcatcaagtacacctaacaactcatagatatctttatgtaatcatc-atcactaataactttaaaacaacacaatttaatca 104  Q
    ||||||||||||  |||||||||||| ||| | |  |||||||||| ||||||||||||||  |||||||||||| ||||||    
T  15463916 tcatcaagtacatttaacaactcatatataacatcctgtaatcatcaatcactaataactt--aaacaacacaatataatca 15463995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 10834984 - 10834935
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcat 71  Q
    ||||||||||||||  |||||||||||||||| | | |||||||||||||    
T  10834984 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 10834935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 13435854 - 13435906
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcac 74  Q
    ||||||||||||||  |||||||||||| ||| | | ||||||||||||||||    
T  13435854 catcatcaagtacatttaacaactcatatataacatcatgtaatcatcatcac 13435906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 1e-35; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 21 - 113
Target Start/End: Original strand, 33796068 - 33796160
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctcac 113  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  33796068 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatcaacatctcac 33796160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 1009297 - 1009380
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  1009297 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 1009380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 1926839 - 1926756
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  1926839 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 1926756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 16376859 - 16376776
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  16376859 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 16376776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 20925853 - 20925770
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  20925853 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 20925770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 52634303 - 52634386
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  52634303 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 52634386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 22 - 112
Target Start/End: Complemental strand, 22132141 - 22132053
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctca 112  Q
    ||||||||||||||  |||||||||||||||| | | |||||||||||||||||||||||||  |||||||||||| |||||| |||||||    
T  22132141 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatcatctca 22132053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 331 - 390
Target Start/End: Complemental strand, 41389279 - 41389220
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||    
T  41389279 acaacatattcatcacttaatagtaacaattatatacaacatcataacaacttaacaata 41389220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 20230181 - 20230120
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactt 83  Q
    ||||||||||||||| |||||||||||||||| | | |||||||||||||||||||||||||    
T  20230181 catcatcaagtacacttaacaactcatagataacatcatgtaatcatcatcactaataactt 20230120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 39244817 - 39244772
Alignment:
Q  345 acttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  39244817 acttaatagtaacaattatatacaacatcataacaacttaacaata 39244772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 39248372 - 39248327
Alignment:
Q  345 acttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  39248372 acttaatagtaacaattatatacaacatcataacaacttaacaata 39248327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 1009837 - 1009896
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  1009837 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 1009896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Complemental strand, 1926145 - 1926086
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  1926145 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 1926086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Complemental strand, 16376396 - 16376337
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  16376396 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 16376337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Complemental strand, 20925159 - 20925100
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  20925159 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 20925100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 22 - 112
Target Start/End: Complemental strand, 41801321 - 41801233
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctca 112  Q
    ||||||||||||||  ||||||||||||||||   | |||||||||||||||||||||| ||  |||||||||||| |||||| |||||||    
T  41801321 catcatcaagtacatttaacaactcatagataatatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcatcatctca 41801233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 52634908 - 52634967
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  52634908 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 52634967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 21406289 - 21406369
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    ||||||||||||||  ||||||||| |||||| | | |||||||||||||||||||||||||  |||| ||||||| ||||||    
T  21406289 catcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataactt--aaactacacaatataatca 21406369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 350 - 390
Target Start/End: Complemental strand, 20229868 - 20229828
Alignment:
Q  350 atagtaacaattatatacaacatcataacaacttaacaata 390  Q
    ||||||||||||||||||||||||||| |||| ||||||||    
T  20229868 atagtaacaattatatacaacatcatagcaacataacaata 20229828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 358 - 390
Target Start/End: Original strand, 21406609 - 21406641
Alignment:
Q  358 aattatatacaacatcataacaacttaacaata 390  Q
    |||||||||||||||||||||||||||||||||    
T  21406609 aattatatacaacatcataacaacttaacaata 21406641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 5e-35; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 21 - 112
Target Start/End: Original strand, 18354832 - 18354923
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctca 112  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18354832 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatcaacatctca 18354923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 19474216 - 19474133
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  19474216 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 19474133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 20294549 - 20294632
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  20294549 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 20294632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 21 - 106
Target Start/End: Complemental strand, 24768606 - 24768521
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaac 106  Q
    ||||||||| |||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||  |||||||    
T  24768606 acatcatcaggtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgcaatcaac 24768521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 40727443 - 40727362
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    ||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||  |||| ||||||| ||||||    
T  40727443 acatcatcaagtacaccaaacaacttatagatatcttcatgtaatcatcatcactaataactt--aaactacacaatataatca 40727362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 20912296 - 20912215
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||| | | |||||||||||||||||||||||||  |||||| ||||| ||||||    
T  20912296 acatcatcaagtacacttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaatacaatataatca 20912215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 21 - 112
Target Start/End: Complemental strand, 22108493 - 22108404
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctca 112  Q
    |||||||||||||||  |||||||||||||||| | | |||||||||||||||||||||||||  ||||||||||||  ||||| |||||||    
T  22108493 acatcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatagaatcatcatctca 22108404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 331 - 390
Target Start/End: Complemental strand, 40724527 - 40724468
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||    
T  40724527 acaacatattcatcacttaatagtaacaattatatacaacatcataacaacttaacaata 40724468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 113
Target Start/End: Original strand, 11219590 - 11219671
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctcac 113  Q
    |||||||||||||||| ||||||||||||||||||           ||||||||||||||||||||||||||||||| |||||||||||||||    
T  11219590 acatcatcaagtacacttaacaactcatagatatc-----------atcatcactaataactttaaaacaacacaatgtaatcaacatctcac 11219671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 113
Target Start/End: Original strand, 11227998 - 11228079
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctcac 113  Q
    |||||||||||||||| ||||||||||||||||||           ||||||||||||||||||||||||||||||| |||||||||||||||    
T  11227998 acatcatcaagtacacttaacaactcatagatatc-----------atcatcactaataactttaaaacaacacaatgtaatcaacatctcac 11228079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 15238161 - 15238080
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||  |||||||||||||||| | | |||||||||||||||||||||||||  |||| ||||||| ||||||    
T  15238161 acatcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaactacacaatataatca 15238080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Complemental strand, 19473676 - 19473617
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  19473676 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 19473617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 20295015 - 20295074
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  20295015 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 20295074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 113
Target Start/End: Original strand, 11224176 - 11224257
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctcac 113  Q
    |||||||||||||||| ||||||||||||||||||           ||||||||||||||||||||||||||||||| ||||||| |||||||    
T  11224176 acatcatcaagtacacttaacaactcatagatatc-----------atcatcactaataactttaaaacaacacaatgtaatcaaaatctcac 11224257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 113
Target Start/End: Original strand, 11229988 - 11230069
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctcac 113  Q
    |||||||||||||||| ||||||||||||||||||           ||||||||||||||||||||||||||||||| ||||||| |||||||    
T  11229988 acatcatcaagtacacttaacaactcatagatatc-----------atcatcactaataactttaaaacaacacaatgtaatcaaaatctcac 11230069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 112
Target Start/End: Complemental strand, 22120634 - 22120546
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctca 112  Q
    ||||||||||||||  |||||||||||||||| | | || ||||||||||||||||||| ||  ||| |||||||| |||||| |||||||    
T  22120634 catcatcaagtacatttaacaactcatagataacatcatataatcatcatcactaataaatt--aaataacacaatataatcatcatctca 22120546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 11226192 - 11226265
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaa 105  Q
    |||||||||||||||| ||||||||||||||||||           ||||||||||||||||||||||||||||||| |||||||    
T  11226192 acatcatcaagtacacttaacaactcatagatatc-----------atcatcactaataactttaaaacaacacaatgtaatcaa 11226265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 10752150 - 10752209
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||| ||||||||||||||| |||||||| ||||||||||||    
T  10752150 acaacatattcatcacttaataataacaattatatacatcatcataataacttaacaata 10752209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 5e-35; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 22 - 113
Target Start/End: Complemental strand, 20158490 - 20158399
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctcac 113  Q
    ||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  20158490 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatcaacatctcac 20158399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 21 - 113
Target Start/End: Complemental strand, 20163942 - 20163850
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctcac 113  Q
    |||||||||||||||| |||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  20163942 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcgtcatcactaataactttaaaacaacacaatgtaatcaacatctcac 20163850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 21 - 113
Target Start/End: Complemental strand, 20161167 - 20161075
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctcac 113  Q
    |||| ||||||||||| |||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  20161167 acattatcaagtacacttaacaactcatagatatcatcatgtaatcgtcatcactaataactttaaaacaacacaatgtaatcaacatctcac 20161075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 9555104 - 9555187
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  9555104 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 9555187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 14759035 - 14758952
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  14759035 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 14758952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 14955803 - 14955720
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  14955803 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 14955720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 17807089 - 17807172
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  17807089 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 17807172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 25688477 - 25688560
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  25688477 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 25688560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 5758499 - 5758423
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaat 97  Q
    |||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  5758499 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaat 5758423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 4562817 - 4562734
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||| ||||||    
T  4562817 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacccaatataatca 4562734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 33740871 - 33740954
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||| ||||||    
T  33740871 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataattttaaaacaacacaatataatca 33740954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 22 - 110
Target Start/End: Original strand, 10711861 - 10711949
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatct 110  Q
    ||||||||||||||  ||||||||| |||||| | | ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  10711861 catcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatcaacatct 10711949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 22 - 110
Target Start/End: Original strand, 10925631 - 10925719
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatct 110  Q
    ||||||||||||||  ||||||||| |||||| | | ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  10925631 catcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatcaacatct 10925719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 12486306 - 12486386
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | |||||   ||||||||||||||||||||||||||||||| ||||||    
T  12486306 acatcatcaagtacacttaacaactcatagatatcatcatgta---atcatcactaataactttaaaacaacacaatataatca 12486386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 22 - 112
Target Start/End: Complemental strand, 17052488 - 17052400
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctca 112  Q
    ||||||||||||||  |||||||||||||||| | | |||||||||||||||||||||||||  |||||||||||| |||||| |||||||    
T  17052488 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatcatctca 17052400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 12422980 - 12423067
Alignment:
Q  23 atcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctca 112  Q
    |||||||||||||  |||||||||||||||| | | |||||||||||||||||||||||||  |||||||||||| |||||| |||||||    
T  12422980 atcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatcatctca 12423067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 329 - 390
Target Start/End: Original strand, 27533043 - 27533104
Alignment:
Q  329 gtacaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||    
T  27533043 gtacaacatattcatcacttaatagtaacaattatatacaacatcataacaacttaacaata 27533104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 23997009 - 23996929
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    ||||||||||||||  |||||||||||||||| | | |||||||||||||||||||||||||  |||||||||||| ||||||    
T  23997009 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatca 23996929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 25689017 - 25689076
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||    
T  25689017 acaacatattcatcacttaatagtaacaattatatacaacatcataacaacttaacaata 25689076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 631790 - 631711
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatc 103  Q
    ||||||||||||||  |||||||||||||||| | | |||||||||||||||||||||||||  |||||||||||| |||||    
T  631790 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatc 631711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 331 - 388
Target Start/End: Original strand, 33741414 - 33741471
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaa 388  Q
    |||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||    
T  33741414 acaacatattcgtcacttaatagtaacaattatacacaacatcataacaacttaacaa 33741471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 22 - 97
Target Start/End: Complemental strand, 22634969 - 22634896
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaat 97  Q
    ||||||||||||||  |||||||||||||||| | | |||||||||||||||||||||||||  ||||||||||||    
T  22634969 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaat 22634896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Complemental strand, 4562277 - 4562218
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  4562277 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 4562218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Complemental strand, 5757802 - 5757743
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  5757802 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 5757743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 9555644 - 9555703
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  9555644 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 9555703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Complemental strand, 14758418 - 14758359
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  14758418 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 14758359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Complemental strand, 14955183 - 14955124
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  14955183 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 14955124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 17807282 - 17807341
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  17807282 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 17807341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 15223981 - 15224026
Alignment:
Q  345 acttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  15223981 acttaataataacaattatatacaacatcataacaacttaacaata 15224026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 347 - 390
Target Start/End: Original strand, 12486815 - 12486858
Alignment:
Q  347 ttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  12486815 ttaatagtaacaattatacacaacatcataacaacttaacaata 12486858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 27532788 - 27532868
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    ||||||||||||||  ||||||||| |||||| | | |||||||||||||||||||||||||  |||| ||||||| ||||||    
T  27532788 catcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataactt--aaactacacaatataatca 27532868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 13813875 - 13813820
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaa 77  Q
    ||||||||||||||  |||||||||||||||| | | |||||||||||||||||||    
T  13813875 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaa 13813820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 13818363 - 13818308
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaa 77  Q
    ||||||||||||||  |||||||||||||||| | | |||||||||||||||||||    
T  13818363 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaa 13818308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 24048427 - 24048375
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcac 74  Q
    ||||||||||||||  |||||||||||||||| | | ||||||||||||||||    
T  24048427 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcac 24048375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1852 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold1852
Description:

Target: scaffold1852; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 21 - 113
Target Start/End: Complemental strand, 864 - 772
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctcac 113  Q
    |||||||||||||||| |||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  864 acatcatcaagtacacttaacaactcatagatatcatcatgcaatcatcatcactaataactttaaaacaacacaatgtaatcaacatctcac 772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 3e-33; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 21 - 113
Target Start/End: Original strand, 27555574 - 27555666
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctcac 113  Q
    |||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  27555574 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaactcaatgtaatcaacatctcac 27555666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 8242447 - 8242530
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  8242447 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 8242530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 11565436 - 11565519
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  11565436 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 11565519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 12620377 - 12620294
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  12620377 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 12620294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 23988338 - 23988421
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  23988338 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 23988421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 21 - 113
Target Start/End: Complemental strand, 22075434 - 22075338
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatcttt----atgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctcac 113  Q
    |||||||||||||||| ||||||||||||||||| | |    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  22075434 acatcatcaagtacacttaacaactcatagatatatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatcaacatctcac 22075338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 22861790 - 22861873
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||| ||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  22861790 acatcaccaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 22861873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 11716984 - 11716908
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaat 97  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||    
T  11716984 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcattaataactttaaaacaacacaat 11716908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 329 - 390
Target Start/End: Complemental strand, 18953201 - 18953140
Alignment:
Q  329 gtacaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18953201 gtacaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaataata 18953140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 329 - 390
Target Start/End: Original strand, 23401009 - 23401070
Alignment:
Q  329 gtacaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||    
T  23401009 gtacaacatattcatcacttaatagtaacaattatatacaacatcataacaacttaacaata 23401070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 14470916 - 14470997
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    ||||||||||||||||||||||||||||| ||||||| || ||||| ||||||||||||||||  |||| ||||||| ||||||    
T  14470916 acatcatcaagtacacctaacaactcataaatatcttcatataatcttcatcactaataactt--aaactacacaatataatca 14470997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 2076322 - 2076410
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctca 112  Q
    ||||||||| ||||  |||||||||||||||| | | |||||||||||||||||||||||||  |||||||||||| |||||| |||||||    
T  2076322 catcatcaaatacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatcatctca 2076410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 22948231 - 22948290
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||    
T  22948231 acaacatattcatcacttaatagtaacaattatatacaacatcataacaacttaacaata 22948290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 22952187 - 22952246
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||    
T  22952187 acaacatattcatcacttaatagtaacaattatatacaacatcataacaacttaacaata 22952246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 23870675 - 23870734
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||    
T  23870675 acaacatattcatcacttaatagtaacaattatatacaacatcataacaacttaacaata 23870734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 23874631 - 23874690
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||    
T  23874631 acaacatattcatcacttaatagtaacaattatatacaacatcataacaacttaacaata 23874690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 113
Target Start/End: Original strand, 19869222 - 19869303
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctcac 113  Q
    |||||||||||||||| ||||||||||||||||||           ||||||||||||||||||||||||||||||| |||||||||||||||    
T  19869222 acatcatcaagtacacttaacaactcatagatatc-----------atcatcactaataactttaaaacaacacaatgtaatcaacatctcac 19869303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 113
Target Start/End: Original strand, 23393676 - 23393757
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctcac 113  Q
    |||||||||||||||| ||||||||||||||||||           ||||||||||||||||||||||||||||||| |||||||||||||||    
T  23393676 acatcatcaagtacacttaacaactcatagatatc-----------atcatcactaataactttaaaacaacacaatgtaatcaacatctcac 23393757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 113
Target Start/End: Original strand, 23413584 - 23413665
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctcac 113  Q
    |||||||||||||||| ||||||||||||||||||           ||||||||||||||||||||||||||||||| |||||||||||||||    
T  23413584 acatcatcaagtacacttaacaactcatagatatc-----------atcatcactaataactttaaaacaacacaatgtaatcaacatctcac 23413665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 1643670 - 1643715
Alignment:
Q  345 acttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  1643670 acttaatagtaacaattatatacaacatcataacaacttaacaata 1643715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 331 - 388
Target Start/End: Complemental strand, 12619834 - 12619777
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaa 388  Q
    |||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||    
T  12619834 acaacatattcgtcacttaatagtaacaattatacacaacatcataacaacttaacaa 12619777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 16623264 - 16623309
Alignment:
Q  345 acttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  16623264 acttaatagtaacaattatatacaacatcataacaacttaacaata 16623309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 18918353 - 18918308
Alignment:
Q  345 acttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18918353 acttaatagtaacaattatatacaacatcataacaacttaacaata 18918308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 8242988 - 8243047
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  8242988 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 8243047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 11565976 - 11566035
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  11565976 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 11566035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 16759351 - 16759410
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  16759351 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 16759410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 19869743 - 19869802
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  19869743 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 19869802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 22862060 - 22862119
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  22862060 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 22862119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 23394182 - 23394241
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  23394182 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 23394241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 23989074 - 23989133
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  23989074 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 23989133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 349 - 390
Target Start/End: Original strand, 14471426 - 14471467
Alignment:
Q  349 aatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  14471426 aatagtaacaattatatacaacatcataacaacttaacaata 14471467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 23400714 - 23400775
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactt 83  Q
    ||||||||||||||  |||||||||||||||| | | |||||||||||||||||||||||||    
T  23400714 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt 23400775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 18918623 - 18918562
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactt 83  Q
    ||||||||||||||  ||||||||| |||||| | | |||||||||||||||||||||||||    
T  18918623 catcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataactt 18918562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 22947702 - 22947774
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| ||||||||||||||||||           ||||||||||||||||||||||||||||||| ||||||    
T  22947702 acatcatcaagtacacttaacaactcatagatatc-----------atcatcactaataactttaaaacaacacaatataatca 22947774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 22951658 - 22951730
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| ||||||||||||||||||           ||||||||||||||||||||||||||||||| ||||||    
T  22951658 acatcatcaagtacacttaacaactcatagatatc-----------atcatcactaataactttaaaacaacacaatataatca 22951730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 23870146 - 23870218
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| ||||||||||||||||||           ||||||||||||||||||||||||||||||| ||||||    
T  23870146 acatcatcaagtacacttaacaactcatagatatc-----------atcatcactaataactttaaaacaacacaatataatca 23870218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 23874102 - 23874174
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| ||||||||||||||||||           ||||||||||||||||||||||||||||||| ||||||    
T  23874102 acatcatcaagtacacttaacaactcatagatatc-----------atcatcactaataactttaaaacaacacaatataatca 23874174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 331 - 390
Target Start/End: Complemental strand, 31479208 - 31479149
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||| ||||||||||||| | |||||||||||||||||||||    
T  31479208 acaacatattcatcacttaataataacaattatatatatcatcataacaacttaacaata 31479149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 18953526 - 18953465
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactt 83  Q
    ||||||||||||||  ||||||||| |||||  | | |||||||||||||||||||||||||    
T  18953526 catcatcaagtacatttaacaactcctagatgacatcatgtaatcatcatcactaataactt 18953465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 16758782 - 16758822
Alignment:
Q  64 atcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    ||||||||||||||||| |||||||||||||||| ||||||    
T  16758782 atcatcatcactaataaatttaaaacaacacaatataatca 16758822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 21 - 113
Target Start/End: Original strand, 8612 - 8704
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctcac 113  Q
    |||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||| ||||| || |||||||||||||||    
T  8612 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaaaaacactatgtaatcaacatctcac 8704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 22 - 113
Target Start/End: Original strand, 11813 - 11904
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctcac 113  Q
    ||||||||||||||| ||||||||||||||| || | |||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  11813 catcatcaagtacacttaacaactcatagatttcatcatgtaatcatcatcactaataattttaaaacaacacaatgtaatcaacatctcac 11904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 64; Significance: 7e-28; HSPs: 2)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 6364 - 6281
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||| ||||||    
T  6364 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcgctaataactttaaaacaacacaatataatca 6281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Complemental strand, 6011 - 5952
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  6011 acaacatattcctcacttaatagtaacaattatacacaacatcataacaacttaacaata 5952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 64; Significance: 7e-28; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 11086 - 11161
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaa 96  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  11086 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaa 11161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 11616 - 11675
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  11616 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 11675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 64; Significance: 7e-28; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 68595 - 68516
Alignment:
Q  25 catcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  68595 catcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 68516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Complemental strand, 68172 - 68113
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  68172 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 68113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 21 - 106
Target Start/End: Complemental strand, 11103 - 11018
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaac 106  Q
    ||||||||| |||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||  |||||||    
T  11103 acatcatcaggtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgcaatcaac 11018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 329 - 390
Target Start/End: Complemental strand, 36951 - 36890
Alignment:
Q  329 gtacaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36951 gtacaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 36890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 37240 - 37179
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactt 83  Q
    ||||||||||||||  ||||||||| |||||| | | |||||||||||||||||||||||||    
T  37240 catcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataactt 37179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 60369 - 60285
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataac-tttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||| ||||||    
T  60369 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataacttttaaaacaacacaatataatca 60285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 22 - 112
Target Start/End: Complemental strand, 21382 - 21293
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctca 112  Q
    ||||||||||||||  |||||||||||||||| | | |||||||||||||||||||||||||| |||||||||||| |||||| |||||||    
T  21382 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataacttt-aaacaacacaatataatcatcatctca 21293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 34171 - 34091
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||   |||||||||||||||||||||||||||| ||||||    
T  34171 acatcatcaagtacacttaacaactcatagatatcatcatgtaatc---atcactaataactttaaaacaacacaatataatca 34091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 347 - 390
Target Start/End: Complemental strand, 33662 - 33619
Alignment:
Q  347 ttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  33662 ttaatagtaacaattatacacaacatcataacaacttaacaata 33619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 22 - 112
Target Start/End: Complemental strand, 7003 - 6915
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctca 112  Q
    ||||||||||||||  |||||||||||||||| | | |||||||||||||||||||||||||  |||||||||||| |||||| |||||||    
T  7003 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatcatctca 6915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 5574 - 5512
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactt 83  Q
    |||||||||||||||||||| |||||||| ||||||| || ||||||||||||||||||||||    
T  5574 acatcatcaagtacacctaagaactcataaatatcttcatataatcatcatcactaataactt 5512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Complemental strand, 4850 - 4791
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  4850 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 4791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 113
Target Start/End: Complemental strand, 15618 - 15537
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctcac 113  Q
    |||||||||||||||| ||||||||||||||||||           ||||||||||||||||||||||||||||||| |||||||||||||||    
T  15618 acatcatcaagtacacttaacaactcatagatatc-----------atcatcactaataactttaaaacaacacaatgtaatcaacatctcac 15537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 46; Significance: 4e-17; HSPs: 4)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 329 - 390
Target Start/End: Complemental strand, 62520 - 62459
Alignment:
Q  329 gtacaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||||| || | ||||||||||||||||||||||||||||||||||||| ||||||||    
T  62520 gtacaacatattcatgacttaatagtaacaattatatacaacatcataacaacataacaata 62459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 329 - 390
Target Start/End: Complemental strand, 66436 - 66375
Alignment:
Q  329 gtacaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||||| || | ||||||||||||||||||||||||||||||||||||| ||||||||    
T  66436 gtacaacatattcatcacttaatagtaacaattatatacaacatcataacaacataacaata 66375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 79687 - 79746
Alignment:
Q  331 acaacatactcgttacttaatagtaacaattatatacaacatcataacaacttaacaata 390  Q
    |||||||| || | |||||||||||||||||||| |||||||||||||||||||||||||    
T  79687 acaacatattcatcacttaatagtaacaattatacacaacatcataacaacttaacaata 79746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 62882 - 62821
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactt 83  Q
    ||||||||||||||  ||||||||| |||||| | | |||||||||||||||||||||||||    
T  62882 catcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataactt 62821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 25610 - 25530
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    ||||||||||||||  |||||||||||||||| | | ||||| |||||||||||||||||||  |||||||||||| ||||||    
T  25610 catcatcaagtacatttaacaactcatagataacatcatgtattcatcatcactaataactt--aaacaacacaatataatca 25530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 10834 - 10883
Alignment:
Q  64 atcatcatcactaataactttaaaacaacacaatttaatcaacatctcac 113  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  10834 atcatcatcactaataactttaaaacaacacaatgtaatcagcatctcac 10883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 112
Target Start/End: Complemental strand, 8782 - 8694
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctca 112  Q
    |||||||| |||||  ||||||||| |||||| | | |||||||||||||||||||||| ||  |||||||||||| |||||| |||||||    
T  8782 catcatcatgtacatttaacaactcgtagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcatcatctca 8694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 112
Target Start/End: Complemental strand, 74374 - 74286
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctca 112  Q
    ||||||||||||||  |||||||||||||||| | | ||||||||||| |||||||||| ||  ||||||||| || |||||| |||||||    
T  74374 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcttcactaataaatt--aaacaacaccatataatcatcatctca 74286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 5860 - 5917
Alignment:
Q  21 acatcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataa 80  Q
    |||||||||||||||| |||||||||||  ||||| | ||||||||||||||||||||||    
T  5860 acatcatcaagtacacttaacaactcat--atatcatcatgtaatcatcatcactaataa 5917  T

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Target: scaffold0380 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 4010 - 4090
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatca 104  Q
    ||||||||||||||  ||||||||| |||||| | | |||||||||| ||||||||||||||  |||| ||||||| ||||||    
T  4010 catcatcaagtacatttaacaactcctagataacatcatgtaatcataatcactaataactt--aaactacacaatataatca 4090  T

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Target: scaffold0327 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 18859 - 18947
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcactaataactttaaaacaacacaatttaatcaacatctca 112  Q
    ||||||||||||||  |||||||| ||||||| | | |  ||||||||||||||||||||  | |||||||||||| |||||| |||||||    
T  18859 catcatcaagtacatttaacaacttatagataacatcacataatcatcatcactaataac--tgaaacaacacaatataatcatcatctca 18947  T

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Target: scaffold0080 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 28509 - 28560
Alignment:
Q  23 atcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcac 74  Q
    |||||||||||||  |||||||||||||||| | | ||||||||||||||||    
T  28509 atcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcac 28560  T

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Target: scaffold0080; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 33974 - 34025
Alignment:
Q  23 atcatcaagtacacctaacaactcatagatatctttatgtaatcatcatcac 74  Q
    |||||||||||||  |||||||||||||||| | | ||||||||||||||||    
T  33974 atcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcac 34025  T

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Target: scaffold0031 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 37245 - 37195
Alignment:
Q  22 catcatcaagtacacctaacaactcatagatatctttatgtaatcatcatc 72  Q
    ||||||||||||||  |||||||||||||||| | | ||||||||||||||    
T  37245 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatc 37195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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