View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0761_low_17 (Length: 287)

Name: NF0761_low_17
Description: NF0761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0761_low_17
NF0761_low_17
[»] chr6 (1 HSPs)
chr6 (1-63)||(31587112-31587174)


Alignment Details
Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 31587174 - 31587112
Alignment:
Q  1 aagactggtgggttgttttgagggaagagaaagtagtgagagaaggaaatgagggttttttgg 63  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31587174 aagactggtgggttgttttgagggaagagaaagtagtgagagaaggaaatgagggttttttgg 31587112  T

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